mRNA_Ecto-sp6_S_contig92.18412.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig92.18412.1
Unique NamemRNA_Ecto-sp6_S_contig92.18412.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
[Close]
BLAST of mRNA_Ecto-sp6_S_contig92.18412.1 vs. uniprot
Match: D7FPT4_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPT4_ECTSI)

HSP 1 Score: 697 bits (1799), Expect = 5.410e-234
Identity = 431/444 (97.07%), Postives = 431/444 (97.07%), Query Frame = 1 
Query:   37 ATSVGDLEENTDGVMELSMALRLRAFREDAGVREICEANGLNENAFVRESHLLRSLDLFMSGLRGLGCLSYFGGLTAVCFINVPNLTSVSGLDECCPGLESLNITECGLETTEGLEGLTXXXXXHLSSNHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIGDGLPLGRTLREVNLAHNQLGCFKELLKLAPLEGLRSLTLQDIHFGDNPVCGLSNYKTYVAYHLTQLTSLDMEVVSEESKAFANTVFLKKSMYYNMRSRIVKRHAGHVIRKASESQRARFATELCGEKAANLQTTLIHLQWQRKHVEQRLMARRAAHDLGNGDTEATIAGDDAASEGLTATDAAVTKGSSGCPATAQSGNSRKRKGAIASSMSSPSMPGSTKRSTSRTTAAAEPEGLEVLQLIAKGQALSSAVVVVEGVLHKMEEQ 1368
            ATSVGDLEENTDGVMELSMALRLRAFREDAGVREICEANGLNENAFVRESHLLRSLDLFMSGLR LGCLSYFGGLTAVCFINVPNLTSVSGLDECCPGLESLNITECGLETTEGLEGLTXXXXXHLSSNHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIGDGLPLGRTLREVNLAHNQLGCFKELLKLAPLEGLRSLTLQDIHFGDNPVCGLSNYKTYVAYHLTQLTSLDMEVVSEESKAFANTVFLKKSMYYNMRSRIVKRHAGHVIRKA         TELCGEKAANLQTTLIHLQWQRKHVEQRLMARRAAHDLGNGDTEATIAGDDAASEGLTATDAAVTKGSSGCPATAQS NSRKRKGAIASSMSSPSMPGSTKRSTSR TAA EPEGLEVLQLIAKGQALSSAVVVVEGVLHKMEEQ
Sbjct:    3 ATSVGDLEENTDGVMELSMALRLRAFREDAGVREICEANGLNENAFVRESHLLRSLDLFMSGLRDLGCLSYFGGLTAVCFINVPNLTSVSGLDECCPGLESLNITECGLETTEGLEGLTXXXXXHLSSNHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIGDGLPLGRTLREVNLAHNQLGCFKELLKLAPLEGLRSLTLQDIHFGDNPVCGLSNYKTYVAYHLTQLTSLDMEVVSEESKAFANTVFLKKSMYYNMRSRIVKRHAGHVIRKA---------TELCGEKAANLQTTLIHLQWQRKHVEQRLMARRAAHDLGNGDTEATIAGDDAASEGLTATDAAVTKGSSGCPATAQSANSRKRKGAIASSMSSPSMPGSTKRSTSRATAATEPEGLEVLQLIAKGQALSSAVVVVEGVLHKMEEQ 437
[Close]
BLAST of mRNA_Ecto-sp6_S_contig92.18412.1 vs. uniprot
Match: A0A6H5L7J2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7J2_9PHAE)

HSP 1 Score: 689 bits (1779), Expect = 1.270e-229
Identity = 420/449 (93.54%), Postives = 425/449 (94.65%), Query Frame = 1 
Query:   37 ATSVGDLEENTDGVMELSMALRLRAFREDAGVREICEANGLNENAFVRESHLLRSLDLFMSGLRGLGCLSYFGGLTAVCFINVPNLTSVSGLDECCPGLESLNITECGLETTEGLEGLTXXXXXHLSSNHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIGDGLPLGRTLREVNLAHNQLGCFKELLKLAPLEGLRSLTLQDIHFGDNPVCGLSNYKTYVAYHLTQLTSLDMEVVSEESKAFANTVFLKKSMYYNMRSRIVKRHAGHVIRKASESQRARFATELCGEKAANLQTTLIHLQWQRKHVEQRLMARRAAHDLGNGDTEATIAGDDAASEGLTATDAAVTKGSSGCPATAQSGNSRKRKGAIASSMSSPSMPGSTKRSTSRTTAAAEPEGLEVLQLIAKGQALSSAVVVVEGVLHKMEEQARNRT 1383
            AT VG+LE+ TDG MELSMALRLRAFREDAGVREICEANGLNENAFVRESHLLRSLDLFMSGLR LGCLSYFGGLTA+CFINVPNLTSVSGLD CCPGLESLNITECGLETT+GLEGLT XXXX      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     EIGDGLPLGRTLREVNLAHNQLGCFKELLKLAPLEGLRSLTLQDIHFGDNPVCGLSNYKTYVAYHLTQLTSLDMEVVSEESKAFANTVFLKKSMYYNMRSRIVKRHAGHVIRKASESQRARFATELCGEKAANLQTTLIHLQWQRKHVEQRLMARRAAHDLGNGDTE T+AGDDAASEGLTATDAAVTKGSSGCPATAQS N RKRKGAIASSMSSPS PGSTKRSTSR TAAAEPEGLEVLQLIAKGQALSSAV VVEGVLHKMEEQAR RT
Sbjct:   35 ATFVGELEKGTDGDMELSMALRLRAFREDAGVREICEANGLNENAFVRESHLLRSLDLFMSGLRELGCLSYFGGLTAICFINVPNLTSVSGLDACCPGLESLNITECGLETTKGLEGLTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNQLTEIGDGLPLGRTLREVNLAHNQLGCFKELLKLAPLEGLRSLTLQDIHFGDNPVCGLSNYKTYVAYHLTQLTSLDMEVVSEESKAFANTVFLKKSMYYNMRSRIVKRHAGHVIRKASESQRARFATELCGEKAANLQTTLIHLQWQRKHVEQRLMARRAAHDLGNGDTEDTVAGDDAASEGLTATDAAVTKGSSGCPATAQSSNCRKRKGAIASSMSSPSTPGSTKRSTSRATAAAEPEGLEVLQLIAKGQALSSAVTVVEGVLHKMEEQARIRT 483
[Close]
BLAST of mRNA_Ecto-sp6_S_contig92.18412.1 vs. uniprot
Match: A0A5D6YI89_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YI89_9STRA)

HSP 1 Score: 147 bits (370), Expect = 3.440e-34
Identity = 156/337 (46.29%), Postives = 202/337 (59.94%), Query Frame = 1 
Query:   70 DGVMELSMALRLRAFREDAGVREICEANGLNENAFVRESHLLRSLDLFMSGLRGLGCLSYFGGLTAVCFINVPNLTSVSGLDECCPGLESLNITECGLETTEGLEGLTXXXXXHLSSNHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIGDGLPLGRTLREVNLAHNQLGCFKELLKLAPLEGLRSLTLQDIHFGDNPVCGLSNYKTYVAYHLTQLTSLDMEVVSEESKAFANTVFLKKSMYYNMRSRIVKRHAGHVIRKASESQR--ARFATELCGEKAANLQTTLIHLQWQRKHVEQRLMARRAAHDLGNGDTEATI 1074
            + V   +   R   +     ++E+C  NGL+ + F R    + +LD+F+   R + C+ +F  L  +  ++ P +T++ GL   CP LE L +TECGLE T G+E   XXXXX      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +   L    +L ++NLA N+L  FK LL L  LE L SL L D H+GDNPVC L NY+TY+ +HL++LT LD   +S  +K  A    +KK MYYNMR + +KR     I K SES R  A   TEL          +L  L  ++K +E R +A  A     NGD+ A +
Sbjct:   24 EAVASAAQLERAALYEASPELKELCRDNGLSASQFARRGAAVATLDMFLGFWRSMKCVMHFPALRELSIVHHPTITALEGLAH-CPNLEQLCVTECGLERTSGMEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHLESALSCCASLTDLNLADNRLCNFKSLLSLTSLERLTSLALSDPHYGDNPVCRLCNYQTYIMFHLSRLTCLDTVELSTRNKQIAEATMIKKKMYYNMRIKAIKRDTRARI-KHSESVRSQAEQQTEL----------SLAPLVREKKEIE-RYVADLAVRFETNGDSGAAV 347
[Close]
BLAST of mRNA_Ecto-sp6_S_contig92.18412.1 vs. uniprot
Match: A0A7S1C613_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C613_9STRA)

HSP 1 Score: 133 bits (335), Expect = 1.240e-30
Identity = 128/269 (47.58%), Postives = 166/269 (61.71%), Query Frame = 1 
Query:  121 DAGVREICEANGLNENAFVRESHLLRSLDLFMSGLRGLGCLSYFGGLTAVCFINVPNLTSVSGLDECCPGLESLNITECGLETTEGLEGLTXXXXXHLSSNHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIGDGLPLGRTLREVNLAHNQLGCFKELLKLAPLEGLRSLTLQDIHFGDNPVCGLSNYKTYVAYHLTQLTSLDMEVVSEESKAFANTVFLKKSMYYNMRSRIVKRHAGHVIRKASESQRAR 927
            D  ++E+C A+G+++    R+ H +  +DLF      +  L YF  L  V  I +P +  + GL E CP +E L ++EC L T        XXXXX      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       IG  L     L  +NLA N +G FKE+  LA +  LR L   + HFGDNPVC L NY+TYV Y L  + +LD   ++E+SK  A   ++KK MYYNMR + +KR+  +VIR+A+E+ + R
Sbjct:    7 DDSLKELCTASGVSDTTLHRKPHTVEYVDLFQCHQVEMRSLQYFRNLREVILIQLPRVDVIEGL-EWCPLIERLWVSECNLRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARNSITAIGTALDRNTCLTSLNLADNGIGYFKEIHNLARVPSLRHLCFSEPHFGDNPVCNLCNYQTYVLYQLPHVDTLDTVALAEDSKQLAEATYIKKKMYYNMRIKTLKRNTTNVIRRATEALQGR 274
[Close]
BLAST of mRNA_Ecto-sp6_S_contig92.18412.1 vs. uniprot
Match: A0A396ZXX6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A396ZXX6_9STRA)

HSP 1 Score: 131 bits (330), Expect = 2.810e-30
Identity = 132/269 (49.07%), Postives = 166/269 (61.71%), Query Frame = 1 
Query:  100 RLRAFREDAGVREICEANGLNENAFVRESHLLRSLDLFMSGLRGLGCLSYFGGLTAVCFINVPNLTSVSGLDECCPGLESLNITECGLETTEGLEGLTXXXXXHLSSNHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIGDGLPLGRTLREVNLAHNQLGCFKELLKLAPLEGLRSLTLQDIHFGDNPVCGLSNYKTYVAYHLTQLTSLDMEVVSEESKAFANTVFLKKSMYYNMRSRIVKRHAGHVIRKA 906
            R   F  +  + E C ANGL    FVR    + SL++F+     +  + YFG L  +  +  P +T++ GL ECCP LESL I ECGL          XXXXX      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   E+  G    + L ++N+A N+L  F+ L  L  L  LRSL+L D H+GDNPVC L NY+TY+   L  L  LD   ++  +K  A+T  +KK MYYNMR + +KR+  + +RKA
Sbjct:   48 RFEWFDANPDLEECCTANGLTRKQFVRRGDRVTSLEMFLGFWASMRSVRYFGLLQHLSIVKHPTITTIDGL-ECCPLLESLRIIECGLTHIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLDELESGFEANKLLEDINVASNRLHSFQSLHGLNKLPALRSLSLSDPHYGDNPVCRLCNYQTYLLCQLPALIYLDTIELTSTNKQVADTTLIKKRMYYNMRIKTIKRNVTNCVRKA 315
[Close]
BLAST of mRNA_Ecto-sp6_S_contig92.18412.1 vs. uniprot
Match: A0A3L6V454_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6V454_9STRA)

HSP 1 Score: 131 bits (330), Expect = 3.220e-29
Identity = 132/269 (49.07%), Postives = 166/269 (61.71%), Query Frame = 1 
Query:  100 RLRAFREDAGVREICEANGLNENAFVRESHLLRSLDLFMSGLRGLGCLSYFGGLTAVCFINVPNLTSVSGLDECCPGLESLNITECGLETTEGLEGLTXXXXXHLSSNHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIGDGLPLGRTLREVNLAHNQLGCFKELLKLAPLEGLRSLTLQDIHFGDNPVCGLSNYKTYVAYHLTQLTSLDMEVVSEESKAFANTVFLKKSMYYNMRSRIVKRHAGHVIRKA 906
            R   F  +  + E C ANGL    FVR    + SL++F+     +  + YFG L  +  +  P +T++ GL ECCP LESL I ECGL          XXXXX      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   E+  G    + L ++N+A N+L  F+ L  L  L  LRSL+L D H+GDNPVC L NY+TY+   L  L  LD   ++  +K  A+T  +KK MYYNMR + +KR+  + +RKA
Sbjct:   48 RFEWFDANPDLEECCTANGLTRKQFVRRGDRVTSLEMFLGFWASMRSVRYFGLLQHLSIVKHPTITTIDGL-ECCPLLESLRIIECGLTHIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLDELESGFEANKLLEDINVASNRLHSFQSLHGLNKLPALRSLSLSDPHYGDNPVCRLCNYQTYLLCQLPALIYLDTIELTSTNKQVADTTLIKKRMYYNMRIKTIKRNVTNCVRKA 315
[Close]
BLAST of mRNA_Ecto-sp6_S_contig92.18412.1 vs. uniprot
Match: A0A418CNC1_9STRA (Uncharacterized protein (Fragment) n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418CNC1_9STRA)

HSP 1 Score: 131 bits (330), Expect = 5.250e-29
Identity = 132/269 (49.07%), Postives = 166/269 (61.71%), Query Frame = 1 
Query:  100 RLRAFREDAGVREICEANGLNENAFVRESHLLRSLDLFMSGLRGLGCLSYFGGLTAVCFINVPNLTSVSGLDECCPGLESLNITECGLETTEGLEGLTXXXXXHLSSNHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIGDGLPLGRTLREVNLAHNQLGCFKELLKLAPLEGLRSLTLQDIHFGDNPVCGLSNYKTYVAYHLTQLTSLDMEVVSEESKAFANTVFLKKSMYYNMRSRIVKRHAGHVIRKA 906
            R   F  +  + E C ANGL    FVR    + SL++F+     +  + YFG L  +  +  P +T++ GL ECCP LESL I ECGL          XXXXX      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   E+  G    + L ++N+A N+L  F+ L  L  L  LRSL+L D H+GDNPVC L NY+TY+   L  L  LD   ++  +K  A+T  +KK MYYNMR + +KR+  + +RKA
Sbjct:   48 RFEWFDANPDLEECCTANGLTRKQFVRRGDRVTSLEMFLGFWASMRSVRYFGLLQHLSIVKHPTITTIDGL-ECCPLLESLRIIECGLTHIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLDELESGFEANKLLEDINVASNRLHSFQSLHGLNKLPALRSLSLSDPHYGDNPVCRLCNYQTYLLCQLPALIYLDTIELTSTNKQVADTTLIKKRMYYNMRIKTIKRNVTNCVRKA 315
[Close]
BLAST of mRNA_Ecto-sp6_S_contig92.18412.1 vs. uniprot
Match: A0A397D3J1_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397D3J1_9STRA)

HSP 1 Score: 131 bits (330), Expect = 5.930e-29
Identity = 132/269 (49.07%), Postives = 166/269 (61.71%), Query Frame = 1 
Query:  100 RLRAFREDAGVREICEANGLNENAFVRESHLLRSLDLFMSGLRGLGCLSYFGGLTAVCFINVPNLTSVSGLDECCPGLESLNITECGLETTEGLEGLTXXXXXHLSSNHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIGDGLPLGRTLREVNLAHNQLGCFKELLKLAPLEGLRSLTLQDIHFGDNPVCGLSNYKTYVAYHLTQLTSLDMEVVSEESKAFANTVFLKKSMYYNMRSRIVKRHAGHVIRKA 906
            R   F  +  + E C ANGL    FVR    + SL++F+     +  + YFG L  +  +  P +T++ GL ECCP LESL I ECGL          XXXXX      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   E+  G    + L ++N+A N+L  F+ L  L  L  LRSL+L D H+GDNPVC L NY+TY+   L  L  LD   ++  +K  A+T  +KK MYYNMR + +KR+  + +RKA
Sbjct:   48 RFEWFDANPDLEECCTANGLTRKQFVRRGDRVTSLEMFLGFWASMRSVRYFGLLQHLSIVKHPTITTIDGL-ECCPLLESLRIIECGLTHIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLDELESGFEANKLLEDINVASNRLHSFQSLHGLNKLPALRSLSLSDPHYGDNPVCRLCNYQTYLLCQLPALIYLDTIELTSTNKQVADTTLIKKRMYYNMRIKTIKRNVTNCVRKA 315
[Close]
BLAST of mRNA_Ecto-sp6_S_contig92.18412.1 vs. uniprot
Match: W4H0H8_9STRA (Protein phosphatase 1 regulatory subunit 7 n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H0H8_9STRA)

HSP 1 Score: 131 bits (330), Expect = 5.940e-29
Identity = 132/269 (49.07%), Postives = 166/269 (61.71%), Query Frame = 1 
Query:  100 RLRAFREDAGVREICEANGLNENAFVRESHLLRSLDLFMSGLRGLGCLSYFGGLTAVCFINVPNLTSVSGLDECCPGLESLNITECGLETTEGLEGLTXXXXXHLSSNHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIGDGLPLGRTLREVNLAHNQLGCFKELLKLAPLEGLRSLTLQDIHFGDNPVCGLSNYKTYVAYHLTQLTSLDMEVVSEESKAFANTVFLKKSMYYNMRSRIVKRHAGHVIRKA 906
            R   F  +  + E C ANGL    FVR    + SL++F+     +  + YFG L  +  +  P +T++ GL ECCP LESL I ECGL          XXXXX      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   E+  G    + L ++N+A N+L  F+ L  L  L  LRSL+L D H+GDNPVC L NY+TY+   L  L  LD   ++  +K  A+T  +KK MYYNMR + +KR+  + +RKA
Sbjct:   48 RFEWFDANPDLEECCTANGLTRKQFVRRGDRVTSLEMFLGFWASMRSVRYFGLLQHLSIVKHPTITTIDGL-ECCPLLESLRIIECGLTHIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLDELESGFEANKLLEDINVASNRLHSFQSLHGLNKLPALRSLSLSDPHYGDNPVCRLCNYQTYLLCQLPALIYLDTIELTSTNKQVADTTLIKKRMYYNMRIKTIKRNVTNCVRKA 315
[Close]
BLAST of mRNA_Ecto-sp6_S_contig92.18412.1 vs. uniprot
Match: A0A425CTH0_9STRA (HTH CENPB-type domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A425CTH0_9STRA)

HSP 1 Score: 131 bits (330), Expect = 6.120e-29
Identity = 132/269 (49.07%), Postives = 166/269 (61.71%), Query Frame = 1 
Query:  100 RLRAFREDAGVREICEANGLNENAFVRESHLLRSLDLFMSGLRGLGCLSYFGGLTAVCFINVPNLTSVSGLDECCPGLESLNITECGLETTEGLEGLTXXXXXHLSSNHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIGDGLPLGRTLREVNLAHNQLGCFKELLKLAPLEGLRSLTLQDIHFGDNPVCGLSNYKTYVAYHLTQLTSLDMEVVSEESKAFANTVFLKKSMYYNMRSRIVKRHAGHVIRKA 906
            R   F  +  + E C ANGL    FVR    + SL++F+     +  + YFG L  +  +  P +T++ GL ECCP LESL I ECGL          XXXXX      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   E+  G    + L ++N+A N+L  F+ L  L  L  LRSL+L D H+GDNPVC L NY+TY+   L  L  LD   ++  +K  A+T  +KK MYYNMR + +KR+  + +RKA
Sbjct:   48 RFEWFDANPDLEECCTANGLTRKQFVRRGDRVTSLEMFLGFWASMRSVRYFGLLQHLSIVKHPTITTIDGL-ECCPLLESLRIIECGLTHIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLDELESGFEANKLLEDINVASNRLHSFQSLHGLNKLPALRSLSLSDPHYGDNPVCRLCNYQTYLLCQLPALIYLDTIELTSTNKQVADTTLIKKRMYYNMRIKTIKRNVTNCVRKA 315
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig92.18412.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPT4_ECTSI5.410e-23497.07Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5L7J2_9PHAE1.270e-22993.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A5D6YI89_9STRA3.440e-3446.29Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A7S1C613_9STRA1.240e-3047.58Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A396ZXX6_9STRA2.810e-3049.07Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A3L6V454_9STRA3.220e-2949.07Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A418CNC1_9STRA5.250e-2949.07Uncharacterized protein (Fragment) n=6 Tax=Aphanom... [more]
A0A397D3J1_9STRA5.930e-2949.07Uncharacterized protein n=3 Tax=Aphanomyces astaci... [more]
W4H0H8_9STRA5.940e-2949.07Protein phosphatase 1 regulatory subunit 7 n=1 Tax... [more]
A0A425CTH0_9STRA6.120e-2949.07HTH CENPB-type domain-containing protein n=1 Tax=A... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig92contigEcto-sp6_S_contig92:294438..298670 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score704.5
Seed ortholog evalue3.3e-200
Seed eggNOG ortholog2880.D7FPT4
Model size1395
Hectar predicted targeting categoryother localisation
Exons7
EggNOG free text desc.axoneme assembly
EggNOG OGsCOG4886@1,KOG0531@2759
Cds size1395
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig92.18412.1prot_Ecto-sp6_S_contig92.18412.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig92 294438..298670 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350561.305718-CDS-Ecto-sp6_S_contig92:294437..2944721682350561.305718-CDS-Ecto-sp6_S_contig92:294437..294472Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig92 294438..294472 +
1682350561.316882-CDS-Ecto-sp6_S_contig92:295588..2956691682350561.316882-CDS-Ecto-sp6_S_contig92:295588..295669Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig92 295589..295669 +
1682350561.3269062-CDS-Ecto-sp6_S_contig92:296055..2962671682350561.3269062-CDS-Ecto-sp6_S_contig92:296055..296267Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig92 296056..296267 +
1682350561.3392544-CDS-Ecto-sp6_S_contig92:296524..2966971682350561.3392544-CDS-Ecto-sp6_S_contig92:296524..296697Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig92 296525..296697 +
1682350561.349068-CDS-Ecto-sp6_S_contig92:297082..2973491682350561.349068-CDS-Ecto-sp6_S_contig92:297082..297349Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig92 297083..297349 +
1682350561.3628016-CDS-Ecto-sp6_S_contig92:297621..2977831682350561.3628016-CDS-Ecto-sp6_S_contig92:297621..297783Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig92 297622..297783 +
1682350561.3733857-CDS-Ecto-sp6_S_contig92:298205..2986701682350561.3733857-CDS-Ecto-sp6_S_contig92:298205..298670Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig92 298206..298670 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig92.18412.1

>prot_Ecto-sp6_S_contig92.18412.1 ID=prot_Ecto-sp6_S_contig92.18412.1|Name=mRNA_Ecto-sp6_S_contig92.18412.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=465bp
MKKTRRSMHSSGATSVGDLEENTDGVMELSMALRLRAFREDAGVREICEA
NGLNENAFVRESHLLRSLDLFMSGLRGLGCLSYFGGLTAVCFINVPNLTS
VSGLDECCPGLESLNITECGLETTEGLEGLTGLTALHLSSNHLQSLDGVE
GMTRLKKLWANDNRITSMDGLSSLGALEDLWLCRNRLTEIGDGLPLGRTL
REVNLAHNQLGCFKELLKLAPLEGLRSLTLQDIHFGDNPVCGLSNYKTYV
AYHLTQLTSLDMEVVSEESKAFANTVFLKKSMYYNMRSRIVKRHAGHVIR
KASESQRARFATELCGEKAANLQTTLIHLQWQRKHVEQRLMARRAAHDLG
NGDTEATIAGDDAASEGLTATDAAVTKGSSGCPATAQSGNSRKRKGAIAS
SMSSPSMPGSTKRSTSRTTAAAEPEGLEVLQLIAKGQALSSAVVVVEGVL
HKMEEQARNRTAWR*
back to top

mRNA from alignment at Ecto-sp6_S_contig92:294438..298670+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig92.18412.1 ID=mRNA_Ecto-sp6_S_contig92.18412.1|Name=mRNA_Ecto-sp6_S_contig92.18412.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=4233bp|location=Sequence derived from alignment at Ecto-sp6_S_contig92:294438..298670+ (Ectocarpus species6 EcLAC_371)
ATGAAGAAAACAAGACGATCTATGCATAGCTCAGGGTAAGCTGTTGTGGT
GATGGACTGCTGCGGACTGCTGCTGTGCGTGGTGCCATTCTGTCCCACAT
CAGAGGTCAAAAGTACTACTGCTGCTGTGCATGCGTACATTGGATGCGGT
TGACAGGGGTATCGCTGACATTCCTGCAGGTGTCAGGTACTCAGGTGCTG
AGCTACCTAAGTCGCGCTGTAGTCTAGACTACTGCTGCAGCTGTGAACCG
ATTTCTGCGTACCAACAGGAGATGCATGCAGGTATTTTACTGCTGCATGC
TCCAAGAAGAGGAGACTCTGCCGTCGACGCTCGCTCGAGGTTTGTTGCGT
ACGATGCAGAAGCTACAGCAGTGGATAATTACTCGATTGAGGAGGGGTCG
TTCGTTTGGTGGGGACTCGCCCTTTTTGGTTGATGAAGCAACGTTGTTGG
CGCATGCATGCATGTGTTTTGGCATGGGGGACTTCGTGTTTGTCTGCTGG
CGTCTTCCTCTCCGTCTCTGCCCGCGCCCCGGCGTCGTCGTGTACTTCAA
CGCACAGTCCGGGTGGCTCAGTGATGGGGTAGAAGGTTGAACCTTCCAAG
CCTGCTGCCAGCAGTCGAAAGCGCTTTCCAATTTCCGTGTGCTGTCTGAC
ACTACCGAACTCCCCTTCGCGCACAATCGCCGCTCTAGGTACGCCCCAAT
ATAGCCCGCTGTGCCCTGTAGCGCGGTATGAGCAGGATTCAGCAGCAGAA
TGTACGTCTGCTGGTGCTGCTCAGTGGACACGATTACATAGCAGAGATGA
AAATATGAGAAGCAGTGTATTTCTCTCTGAACCGTGTGTACGACTACCGT
ACGGGCTCTGTGTGGCTGATGCACTTACTTGTAACAGACCTGTTGGTGCA
GATCAAAGCACCCACAACGTACACACCACGGTTACGATCCAACAGGGACC
CGGCGAGCCATCAGTGTACTCTCTCTTCGCGCTTGGTTGATTGGTTCAAT
CAAAGCAACTGATAGTTCAACACGTGCTCCGCCACGGTTCCATGCCTAAG
CAATGGAGCCCCGATGATAAAAAGGTTCCATTTTACTACTGTGACAACTA
TAACCGGGATGTGAAGAACGTCCACAACTGCTGCGCTGCTCCGTTTTGTA
GGGCGACCTCTGTCGGCGATCTCGAGGAGAATACAGATGGAGTCATGGAG
CTATCGATGGCCCTTCGTCTGAGAGCATTTCGGTAAGAGCGAAGGCATGC
TTATGCGAGGTGTTGGAGAAGTGTGGTATGTATGGCGCGGAAACGCAAAC
CTACAAGCAACGAGCGTACAGAAAGAACAGCGTCACACGCAGTTGTTGGA
CGAGGGATGATTTACCCTCTTCGACGACCAGGTGTCCAGCGTAAGCGTTG
CGGCCGCAATCTGCAGTAGCCTGCTGCAACAAAGGAGGAGTCAACTTGTT
GCCCCGTCCATCCTTGGCCACAGCACTTGCTGTGATGCTAGGTGATGATG
CCAACACGTACAGCAATAGACCTTCTGTTGACGGAGAAATACTCCCCCCT
TCCGCCCCGACAAACCCCTCCCTACCGACCGACTGCGTTGCTCTTGTTCC
CTTTCCGCAACACAACAGCGAGGACGCCGGAGTACGCGAGATATGCGAGG
CTAACGGCCTCAACGAGAATGCGTTTGTTCGGGAGAGTCACCTGCTGCGG
TCCTTGGATCTTTTTATGAGCGGCTTGAGGGGCTTGGGCTGCCTCAGCTA
CTTCGGAGGCCTTACAGCGGTCTGCTTCATCAATGTACCTAACCTCACCT
CTGTGTCAGGGCTGGACGAGTGCTGTCCTGGTCAGTACCATTTCTTTGAC
AGAGCTTGGCTACGATCGCAAGGGTAGCAGCAGATCACAACTTCGGGGCA
CATATCGAGTCCAGAATAGATGCCCTGTCCATGGGTATGGCATCGACACA
CATGTCAGTGCTTGCTGGAAATTGACAAAGTCCTTTTGACGACAGTGACG
GGTAGGGTCCGCACACTGCACTGACAGTTGTGCGTTTGTCATGTGCTAAA
AATTGCTGAGCCTTCAATGTTCGCGAATTTGTTGCAGGTCTAGAAAGCCT
CAACATCACTGAGTGCGGCCTAGAGACTACGGAAGGGCTGGAGGGTCTGA
CAGGCCTAACGGCCTTGCACCTGTCGAGCAACCACCTGCAATCTTTGGAT
GGGGTAGAGGGGATGACAAGGCTGAAGAAGTTGTGGGCTAACGATAATCG
CATAACGTCGGTGAGCGACCGCCCAGGGGAAAGATTCATGATCAAGGGTT
AATCTACGCCGCCGGTGATGCGAGTCAGAACAGGACGCATGGAAATATTG
ATTGGGTGTTTTATTTTGTGGCATGCGGTACCCAATCAATATGTGGCATG
CGGTAGCAGATGAGTATTGACCGGTTTAGCCTCGGTGTAACCAGTGGCGA
GCGTGTGGACCTACGTCACGTCTACGTGGAGGGCCGTCGAATGTGAGAGT
GGACCGGCAATCTTGAAGTTGTCGGGTGTTTAGATTCTTGTCAGGTGTAT
CAACCGCCATCCAGGTGACCCACGGTTACTCCCGTTCGTGTCTCCACGTT
GTACAACACCAACCTCCTTTTACAAACTCCAAAACGCACGCACAGATGGA
CGGGTTATCCTCTCTTGGGGCTCTCGAGGACCTCTGGCTGTGCCGTAACC
GGCTGACCGAAATTGGAGACGGCCTCCCACTGGGCAGAACCCTGCGAGAG
GTCAACCTTGCCCACAACCAGCTGGGATGTTTCAAGGAGCTCCTTAAGCT
CGCCCCGCTCGAAGGGCTGCGGAGCTTGACGCTCCAGGACATCCACTTTG
GCGACAACCCCGTGTGTGGGCTGTCCAACTACAAGACCTACGTCGCGTAC
CATTTGACGCAGGTACGTATTTTGTGGCTCGCCCGGATGGGTATAGGACT
GAGAGAGTCGGCGACTCTGGACAAGGCAGACGGCCGAGGGCACAGAAGCC
GCTTCGGCACAGATGTATTGCGGTGTATTATGCTCAATTGTTTCAGCGAT
GCTTGCACTCTGTTGGGTGTGTCCCATCCAATCTGGTACGTGTTTCTTGC
GCGGCAAACCGCTGCCGCAGGGTTTAGATTTTCGGTAAATATCGACGTAC
TTTGCCCCCCTGTTTTGGAAACACCTGCTTGCAGTTGACCTCGTTGGATA
TGGAGGTGGTCTCGGAGGAATCTAAGGCCTTCGCCAACACTGTCTTCCTC
AAGAAGAGCATGTACTACAACATGCGATCGCGGATTGTGAAGAGGCACGC
TGGGCACGTCATCCGAAAGGCGAGCGAATCTCAACGGGCACGCTTTGTCC
TACGGCAGTAGTTCGGTCGTCGTAGGTCCTTGTTGATAACGATGGGTCGC
CCACTTTGCACAGTAAGAATGGTCGGCCGCTTCCTAACAACTTCTCCAGC
TTCCCAAGGATGGCGTGATTTGAGGCATCGCGCGGAGGGGGCATGCTCCG
TCTCCACCCAAGCCGCCGCCGCCTGCACTCTGGAAATTCCGTTGCTCGCC
GGCCTTGAAACCCCTCTCCCTTTCGTGAGCATTCCATTTCCAGCGTGTAC
CGTACCAACCGACCCTTTTTTTCCGCGGCTCGGTTTCGGAAAACTCTAGC
TGTATCTTGATGCTTAAAACACTCACTTTTTCGTGGTTAGAACACTAACT
TGTTTTCGTGGTTGGGAACACTTGTTTTTTCGTGGTTGGAAAACGCTCAC
TTTTCGTCGTTGGAACAGGCTACAGAGCTCTGCGGGGAGAAGGCCGCCAA
CCTCCAGACCACGCTTATCCACCTCCAGTGGCAGAGGAAGCACGTAGAGC
AGCGGCTCATGGCCAGGCGCGCGGCCCATGACCTAGGCAACGGGGACACC
GAAGCCACCATTGCTGGCGACGATGCTGCCAGTGAAGGGCTTACCGCCAC
AGATGCGGCCGTCACAAAGGGGAGCAGCGGGTGTCCGGCAACAGCACAGA
GCGGCAACAGCAGAAAACGGAAGGGCGCAATCGCGAGCAGCATGTCATCG
CCCTCCATGCCTGGCAGCACCAAAAGGTCTACCTCTCGCACAACAGCAGC
GGCGGAGCCCGAAGGGCTGGAGGTGCTGCAGCTGATCGCGAAGGGGCAGG
CCCTCTCTAGCGCCGTGGTGGTGGTGGAGGGGGTGCTGCACAAAATGGAA
GAGCAGGCAAGAAATAGGACGGCTTGGAGGTAG
back to top

Coding sequence (CDS) from alignment at Ecto-sp6_S_contig92:294438..298670+

>mRNA_Ecto-sp6_S_contig92.18412.1 ID=mRNA_Ecto-sp6_S_contig92.18412.1|Name=mRNA_Ecto-sp6_S_contig92.18412.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1395bp|location=Sequence derived from alignment at Ecto-sp6_S_contig92:294438..298670+ (Ectocarpus species6 EcLAC_371)
ATGAAGAAAACAAGACGATCTATGCATAGCTCAGGGGCGACCTCTGTCGG
CGATCTCGAGGAGAATACAGATGGAGTCATGGAGCTATCGATGGCCCTTC
GTCTGAGAGCATTTCGCGAGGACGCCGGAGTACGCGAGATATGCGAGGCT
AACGGCCTCAACGAGAATGCGTTTGTTCGGGAGAGTCACCTGCTGCGGTC
CTTGGATCTTTTTATGAGCGGCTTGAGGGGCTTGGGCTGCCTCAGCTACT
TCGGAGGCCTTACAGCGGTCTGCTTCATCAATGTACCTAACCTCACCTCT
GTGTCAGGGCTGGACGAGTGCTGTCCTGGTCTAGAAAGCCTCAACATCAC
TGAGTGCGGCCTAGAGACTACGGAAGGGCTGGAGGGTCTGACAGGCCTAA
CGGCCTTGCACCTGTCGAGCAACCACCTGCAATCTTTGGATGGGGTAGAG
GGGATGACAAGGCTGAAGAAGTTGTGGGCTAACGATAATCGCATAACGTC
GATGGACGGGTTATCCTCTCTTGGGGCTCTCGAGGACCTCTGGCTGTGCC
GTAACCGGCTGACCGAAATTGGAGACGGCCTCCCACTGGGCAGAACCCTG
CGAGAGGTCAACCTTGCCCACAACCAGCTGGGATGTTTCAAGGAGCTCCT
TAAGCTCGCCCCGCTCGAAGGGCTGCGGAGCTTGACGCTCCAGGACATCC
ACTTTGGCGACAACCCCGTGTGTGGGCTGTCCAACTACAAGACCTACGTC
GCGTACCATTTGACGCAGTTGACCTCGTTGGATATGGAGGTGGTCTCGGA
GGAATCTAAGGCCTTCGCCAACACTGTCTTCCTCAAGAAGAGCATGTACT
ACAACATGCGATCGCGGATTGTGAAGAGGCACGCTGGGCACGTCATCCGA
AAGGCGAGCGAATCTCAACGGGCACGCTTTGCTACAGAGCTCTGCGGGGA
GAAGGCCGCCAACCTCCAGACCACGCTTATCCACCTCCAGTGGCAGAGGA
AGCACGTAGAGCAGCGGCTCATGGCCAGGCGCGCGGCCCATGACCTAGGC
AACGGGGACACCGAAGCCACCATTGCTGGCGACGATGCTGCCAGTGAAGG
GCTTACCGCCACAGATGCGGCCGTCACAAAGGGGAGCAGCGGGTGTCCGG
CAACAGCACAGAGCGGCAACAGCAGAAAACGGAAGGGCGCAATCGCGAGC
AGCATGTCATCGCCCTCCATGCCTGGCAGCACCAAAAGGTCTACCTCTCG
CACAACAGCAGCGGCGGAGCCCGAAGGGCTGGAGGTGCTGCAGCTGATCG
CGAAGGGGCAGGCCCTCTCTAGCGCCGTGGTGGTGGTGGAGGGGGTGCTG
CACAAAATGGAAGAGCAGGCAAGAAATAGGACGGCTTGGAGGTAG
back to top