mRNA_Ecto-sp6_S_contig92.18409.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig92.18409.1
Unique NamemRNA_Ecto-sp6_S_contig92.18409.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
[Close]
BLAST of mRNA_Ecto-sp6_S_contig92.18409.1 vs. uniprot
Match: D7FPT6_ECTSI (Heat Shock transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPT6_ECTSI)

HSP 1 Score: 1214 bits (3141), Expect = 0.000e+0
Identity = 836/1000 (83.60%), Postives = 844/1000 (84.40%), Query Frame = 2 
Query:   14 GKAQRHPPGASPTRATGAYIRFNHSGAVGSGISRPLASESECVEVFWKRETFS*SLRGTKTAAGMVVALEHRHDRNEPDHDEDAYSRSGDVPGMDVVSAGSVTSFVRKLFQMVQGECDSIVGFVADGTAFEVKDPRRLEQDILPKYFRHSRFQSLVRQLNFYSFKKISKERSVWIYKHAFFRRDEPELLHALKRKTNQHGAPARVGGGVAGLGVGDGGADDMMVVDRVAPIVGGSLSRDPLDSNKARSRGLSFLPPRHADGGGSAFRPPHHDYHHSPSFSNQHQEXXQHRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKNGSSSSGSGRMYRASSSRGAGGGPSTGGAXXXXXXXXXXXXXXXAPDFAWAGAGGRPVSSSGGPGVDYDRRSGGVDGGNGNGMRATKAGGHRGFDDGRSPSSSSSSQAYSRQGPAIGDDRGSALGRQRGCGNGGPAXXXXXXXXXXXXX---VTDKDHALALFGLSALCQVASATEAPAAHDKESIGQMDEDGGXXXXXXXRGSRRLSDVVDRQPQKRHRGVGPEADAGSRRGWAAQESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSGSGGVFCPTWDWGRAACEPAIRLPGSFVDRRFEEVDQQVVKXXXXXXXXXXXXXXXXXREQGESRQEFAQESDDEGPEARPDNGSAAHRRGAAMAITDEASPHVSVSLAGSDEPRXXXXXXXXXXXRDAQADMKAEADVGLDGIGAFFSHCCSAAAPGNDTTRASESVFLATVANSGDGGLREMAVFCAGPAGKAPDAAPAAYLAREVSLFLQGEEAVAEDLRVYAEALDPAAVDVVVEGSLGSSSNPAAVTQPLSPDGAKLLRVFCRFAACRLGRALEVASLVAESAEXXXXXXXXXXXXXXXXXXGLLLQRHGAFARRVAPQLDSCRWKWWRAAVRFS 3004
            GKAQRHPPGA+PTRATGAYIRF HSGAVG  ISR LASE+                      AGMVVALEHRHDRNEPD DEDAYSRSGDVPGMDVVSAGSVTSFVRKLFQMVQGECDSIVGFVADGTAFEVKDPRRLEQDILPKYFRHSRFQSLVRQLNFYSFKKISKERSVWIYKHAFFRRDEPELLHALKRKTNQHGAPARVGGGVAGLGVGDGGADDMMVVDR APIVGGSLSRDPLDSNKARSRGLSFLPPRHADGG SAFRPPHHDYHHSPSFSNQHQE  QH P   XXXXXXXXXXXXXXXXXXXXXX   RKNGSS  GSGR+Y ASSSRGAGGGPST   XXXXXXXXXXXXXXX                  GPGV+YDRRSGGVDGGNG  MRATKAGGHRGFDDGRSPSSSSSSQAYSRQGPAIGDDRGSA+GRQRG       XXXXXXXXXXXXX   VTDKDHALALFGLSALCQVASATEAPAAHD ESIGQMDEDGGXXXXXXXRGSRRLSDVVDRQPQKRHRGVGP+ADAGSRRGWA QES  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                                 TSGSGGVFCPTWDWGRAACEPAIRLPGSFVDRRFEEVDQQVVKXXXXXXXXXXXXXXXXXR+QGESRQEFAQ+SDDEGPEARPD GSAAHRRG AMAITDE    VSVSLAGSDEPRXXXXXXXXXXX DAQADMKAEADVGLDGIGAFFSHCCSAAA GNDTTRASESVFLATVANSGDGGLREMAVFCAGPAGKAPDAA  AYLAREVSLFLQ EEAVAEDLRVYAEALDPAAVDVVVEGSLGSSSNP  VTQPLSPDGAKLLRVFCRFAACRLGRALEVASLVAESAEXXXXXXXXXXXXXXXXXXGLLLQRHGAFARRVAPQLDSCRWKWWRAAVRFS
Sbjct:  286 GKAQRHPPGAAPTRATGAYIRFYHSGAVGREISRSLASET----------------------AGMVVALEHRHDRNEPDLDEDAYSRSGDVPGMDVVSAGSVTSFVRKLFQMVQGECDSIVGFVADGTAFEVKDPRRLEQDILPKYFRHSRFQSLVRQLNFYSFKKISKERSVWIYKHAFFRRDEPELLHALKRKTNQHGAPARVGGGVAGLGVGDGGADDMMVVDRAAPIVGGSLSRDPLDSNKARSRGLSFLPPRHADGGVSAFRPPHHDYHHSPSFSNQHQEHHQHPPHYPXXXXXXXXXXXXXXXXXXXXXXPAHRKNGSS--GSGRVYHASSSRGAGGGPSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPGVEYDRRSGGVDGGNG--MRATKAGGHRGFDDGRSPSSSSSSQAYSRQGPAIGDDRGSAVGRQRGXXXXXXXXXXXXXXXXXXXXXXXVTDKDHALALFGLSALCQVASATEAPAAHDNESIGQMDEDGGXXXXXXXRGSRRLSDVVDRQPQKRHRGVGPDADAGSRRGWAVQESSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------------------------------------------------------TSGSGGVFCPTWDWGRAACEPAIRLPGSFVDRRFEEVDQQVVKXXXXXXXXXXXXXXXXXRDQGESRQEFAQKSDDEGPEARPDTGSAAHRRGEAMAITDE----VSVSLAGSDEPRXXXXXXXXXXXXDAQADMKAEADVGLDGIGAFFSHCCSAAASGNDTTRASESVFLATVANSGDGGLREMAVFCAGPAGKAPDAASPAYLAREVSLFLQSEEAVAEDLRVYAEALDPAAVDVVVEGSLGSSSNPVPVTQPLSPDGAKLLRVFCRFAACRLGRALEVASLVAESAEXXXXXXXXXXXXXXXXXXGLLLQRHGAFARRVAPQLDSCRWKWWRAAVRFS 1190
[Close]
BLAST of mRNA_Ecto-sp6_S_contig92.18409.1 vs. uniprot
Match: A0A6H5L0A5_9PHAE (HSF_DOMAIN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0A5_9PHAE)

HSP 1 Score: 1110 bits (2871), Expect = 0.000e+0
Identity = 829/941 (88.10%), Postives = 845/941 (89.80%), Query Frame = 2 
Query:  206 MVVALEHRHDRNEPDHDEDAYSRSGDVPGMDVVSAGSVTSFVRKLFQMVQGECDSIVGFVADGTAFEVKDPRRLEQDILPKYFRHSRFQSLVRQLNFYSFKKISKERSVWIYKHAFFRRDEPELLHALKRKTNQHGAPARVGGGVAGLGVGDGGADDMMVVDRVAPIVGGSLSRDPLDSNKARSRGLSFLPPRHADGG-GSAFRPPHHDYHHSPSFSNQHQEXXQHRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKNGSSSSGSGRMYRASSSRGAGGGPSTGGAXXXXXXXXXXXXXXXAPDFAWAGAGGRPVSSSGGPGVDYDRRSGGVDGGNGNGMRATKAGGHRGFDDGRSPSSSSSSQAYSRQGPAIGDDRGSALGRQRGCGNGGPAXXXXXXXXXXXXX-----VTDKDHALALFGLSALCQVASATEAPAAHDKESIGQMDEDGGXXXXXXXRGSRRLSDVVDRQPQKRHRGVGPEADAGSRRGWAAQESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSGSGGVFCPTWDWGRAACEPAIRLPGSFVDRRFEEVDQQVVKXXXXXXXXXXXXXXXXX-REQGESRQEFAQESDDEGPEARPDNGSAAHRRGAAMAITDEAS-PHVSVSLAGSDEPRXXXXXXXXXXXRDAQADMKAEADVGLDGIGAFFSHCCSAAAPGNDTTRASESVFLATVANSGDGGLREMAVFCAGPAGKAPDAAPAAYLAREVSLFLQGEEAVAEDLRVYAEALDPAAVDVVVEGSLGSSSNPAAVTQPLSPDGAKLLRVFCRFAACRLGRALEVASLVAESAEXXXXXXXXXXXXXXXXXXGLLLQRHGAFARRVAPQLDSCRWKWWRAAVRFS 3004
            MVVALEHRHDRNE DHDEDAYSRSGDVPGMDV+SAGSVTSFVRKLFQMVQGECDSIVGFVADGTAFEVKDPRRLEQDILPKYFRHSRFQSLVRQLNFYSFKKISKERSVWIYKHAFFRRDEPELLHALKRKTNQHG PARVGGGVAGLGVG GGADDMMVVDR APIVGGSLSRDPL +NKARS GLSFLPPRHADGG G AFRP       SPSFSNQHQE  QH  XXXXXXXXXXXXXXXXXXXXXXXX    RKNGSS  GSGRMY ASSSRGAGGGPSTGGA   XXXXXXXXXXX AP FAWAGAGGRPVSSS GPG +YDRRSGGVDGG+G  MRATKAG HRGFDDGRS  SSSSSQAYSRQGPAIGDDRGSALGRQRG G     XXXXXXXXXXXXX     VT+KDHALALFGLSALCQVASATEAPAAH K SIGQ+DEDG XXXXXXXRGSRRLSD VDR+ QKRHRGVGPEA+A SRRGWA QES     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    TSGSGGVFCPTWDWGRAACEPA+RLPGSFVDRRFEEVDQQVVKXXXXXXXXXXXXXXXXX R++GESRQEFAQESDDEGPEARPD  S AHRRG A+   DEAS PHVSVS  GSDEPR           RD +ADMKAEADVGL+GIGAFFSHCCSAA+ GNDTTRA ES FLATVANSGDGGLREMAVFCAGPAGKAPDAAPAAYLAREVSLFLQ EEAVAEDLRVYAEALDPAAVD+VVE SLGSSSNPAAVTQPLSPDG KLLRVFCRFAACRLGRALEVASLVAESAE XXXXXXXXXXXXXXXX GLLLQRHGAFARRVAPQLDSCRWKWWRAAVRFS
Sbjct:    1 MVVALEHRHDRNELDHDEDAYSRSGDVPGMDVMSAGSVTSFVRKLFQMVQGECDSIVGFVADGTAFEVKDPRRLEQDILPKYFRHSRFQSLVRQLNFYSFKKISKERSVWIYKHAFFRRDEPELLHALKRKTNQHGVPARVGGGVAGLGVGGGGADDMMVVDRAAPIVGGSLSRDPLANNKARSHGLSFLPPRHADGGAGGAFRPXXXXXXXSPSFSNQHQEHHQHXXXXXXXXXXXXXXXXXXXXXXXXXXRPAHRKNGSS--GSGRMYHASSSRGAGGGPSTGGAAVPXXXXXXXXXXXGAPGFAWAGAGGRPVSSSXGPGAEYDRRSGGVDGGSG--MRATKAGEHRGFDDGRS--SSSSSQAYSRQGPAIGDDRGSALGRQRGDGXXXXXXXXXXXXXXXXXXXXXXXVTNKDHALALFGLSALCQVASATEAPAAH-KGSIGQVDEDGXXXXXXXXRGSRRLSDGVDRRQQKRHRGVGPEAEARSRRGWAVQESLGDEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----TSGSGGVFCPTWDWGRAACEPAMRLPGSFVDRRFEEVDQQVVKXXXXXXXXXXXXXXXXXXRDEGESRQEFAQESDDEGPEARPDTSSTAHRRGEAIVTPDEASLPHVSVSFVGSDEPRPTPTAPVPPRPRDTRADMKAEADVGLEGIGAFFSHCCSAAS-GNDTTRALESGFLATVANSGDGGLREMAVFCAGPAGKAPDAAPAAYLAREVSLFLQSEEAVAEDLRVYAEALDPAAVDIVVEESLGSSSNPAAVTQPLSPDGGKLLRVFCRFAACRLGRALEVASLVAESAEEXXXXXXXXXXXXXXXXQGLLLQRHGAFARRVAPQLDSCRWKWWRAAVRFS 929
[Close]
BLAST of mRNA_Ecto-sp6_S_contig92.18409.1 vs. uniprot
Match: A0A7S2ANP9_9STRA (Hypothetical protein n=4 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2ANP9_9STRA)

HSP 1 Score: 145 bits (365), Expect = 1.220e-32
Identity = 69/96 (71.88%), Postives = 81/96 (84.38%), Query Frame = 2 
Query:  320 TSFVRKLFQMVQGECDSIVGFVADGTAFEVKDPRRLEQDILPKYFRHSRFQSLVRQLNFYSFKKISKERSVWIYKHAFFRRDEPELLHALKRKTNQ 607
            TSFVRKL+ +V  E D IVGF+ DG++FEVKDP+RLE ++LPKYFRHSRFQSLVRQLNFYSFKK SKER +WIY+H  F RD+P LL  LKRKT+Q
Sbjct:   37 TSFVRKLYDLVTCESDDIVGFLPDGSSFEVKDPKRLEVEVLPKYFRHSRFQSLVRQLNFYSFKKASKERHMWIYRHELFHRDKPVLLEGLKRKTSQ 132
[Close]
BLAST of mRNA_Ecto-sp6_S_contig92.18409.1 vs. uniprot
Match: A0A4D9D5W3_9STRA (HSF_DOMAIN domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D5W3_9STRA)

HSP 1 Score: 132 bits (333), Expect = 3.090e-28
Identity = 72/138 (52.17%), Postives = 89/138 (64.49%), Query Frame = 2 
Query:  191 KTAAGMVVALEHRHDRNEPDHDEDAYSRSGDVPGMDVVSAGSVTSFVRKLFQMVQGECDSIVGFVADGTAFEVKDPRRLEQDILPKYFRHSRFQSLVRQLNFYSFKKISKERSVWIYKHAFFRRDEPELLHALKRKTN 604
            + A     AL  R +    + DED  S        D+V   S  +F+RKLFQMV  E + I+ F  DG +F VKDP RLE ++LPKYFRHSRFQSLVRQLNFY FKKISKER +WIY+H  F++ +P LL  LKRK +
Sbjct:   28 RLATRQEAALPSRSNSTASEDDEDIQS--------DLVP--SANTFIRKLFQMVTSENNDIISFTPDGLSFHVKDPVRLENEVLPKYFRHSRFQSLVRQLNFYDFKKISKERVIWIYRHKLFQQGKPHLLDDLKRKPS 155
[Close]
BLAST of mRNA_Ecto-sp6_S_contig92.18409.1 vs. uniprot
Match: I2CQX2_NANGC (HSF_DOMAIN domain-containing protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQX2_NANGC)

HSP 1 Score: 125 bits (315), Expect = 1.030e-27
Identity = 64/118 (54.24%), Postives = 82/118 (69.49%), Query Frame = 2 
Query:  320 TSFVRKLFQMVQGECDSIVGFVADGTAFEVKDPRRLEQDILPKYFRHSRFQSLVRQLNFYSFKKISKERSVWIYKHAFFRRDEPELLHALKRKTNQHGAPAR-------VGGGVAGLG 652
            T FV+KLF MV  E  SI+ F  DG +FEVK+P+RLE ++LP+Y+RH  F S VRQLNFY+FKK+SKER++WIY+H  F+R  P+LL  LKRKT+    P         +GGG AG G
Sbjct:   25 TCFVKKLFTMVAVEDPSILSFTPDGKSFEVKNPKRLESEVLPRYYRHGHFTSFVRQLNFYNFKKVSKERNIWIYRHECFQRGRPQLLDMLKRKTSNAHHPHHPYNIQHTMGGGRAGEG 142
[Close]
BLAST of mRNA_Ecto-sp6_S_contig92.18409.1 vs. uniprot
Match: A0A4D9D0Y9_9STRA (HSF_DOMAIN domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D0Y9_9STRA)

HSP 1 Score: 126 bits (316), Expect = 8.280e-26
Identity = 62/119 (52.10%), Postives = 83/119 (69.75%), Query Frame = 2 
Query:  248 DHDEDAYSRSGDVPGMDVVSAGSVTSFVRKLFQMVQGECDSIVGFVADGTAFEVKDPRRLEQDILPKYFRHSRFQSLVRQLNFYSFKKISKERSVWIYKHAFFRRDEPELLHALKRKTN 604
            D +  A S+ G  P     ++   T FV+KLF MV  E  SI+ F  DG +FEVK+P+RLE ++LP+Y+RH  F S VRQLNFY+FKK+SKER++WIY+H  F+R  P+LL  LKRKT+
Sbjct:    5 DRNTGAISKKGSPPE----ASSQSTCFVKKLFTMVAVEDPSILSFTPDGKSFEVKNPKRLESEVLPRYYRHGHFTSFVRQLNFYNFKKVSKERNIWIYRHECFQRGRPQLLEMLKRKTS 119
[Close]
BLAST of mRNA_Ecto-sp6_S_contig92.18409.1 vs. uniprot
Match: B8BWZ1_THAPS (HSF_DOMAIN domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BWZ1_THAPS)

HSP 1 Score: 120 bits (302), Expect = 9.130e-25
Identity = 72/160 (45.00%), Postives = 94/160 (58.75%), Query Frame = 2 
Query:  311 GSVTSFVRKLFQMVQGECDSIVGFVADGTAFEVKDPRRLEQDILPKYFRHSRFQSLVRQLNFYSFKKISKERSVWIYKHAFFRRDEPELLHALKRKT---------NQHGAPARVGGGVAGLGVGDG------GADDMMVVDRVAPIVGGSLSRDPLDSN 745
            G+ + FV KLFQMV G  D IV +V  G AF + D  RLE++ LP YFRHSRFQSLVRQLNFY+F+K+++ER+ W+Y H  F RD+ E LH L+R+T          ++G P     G A   + +G      G  DMMV  R     G  +SR P  S+
Sbjct:   20 GAPSGFVMKLFQMVNGAEDDIVSWVPSGQAFRINDISRLEKETLPSYFRHSRFQSLVRQLNFYNFRKVNRERTFWVYYHPLFHRDQEENLHNLRRRTCPGVDGRISKRNGGPNLDRDGFASPSLYEGSVSASSGGVDMMVSTRA----GAKVSRSPSPSS 175
[Close]
BLAST of mRNA_Ecto-sp6_S_contig92.18409.1 vs. uniprot
Match: A0A7S2M136_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2M136_9STRA)

HSP 1 Score: 117 bits (294), Expect = 1.810e-24
Identity = 58/106 (54.72%), Postives = 72/106 (67.92%), Query Frame = 2 
Query:  284 VPGMDVVSAGSVTSFVRKLFQMVQGECDSIVGFVADGTAFEVKDPRRLEQDILPKYFRHSRFQSLVRQLNFYSFKKISKERSVWIYKHAFFRRDEPELLHALKRKT 601
            VP       G+ + FV KL+QMV G  D IV +V  G AF + D  RLE D LP YFRHSRFQSLVRQLNFY+F+KI++ER+ W+Y H  F RD P+ L  L+R+T
Sbjct:   37 VPSSGDGKNGTPSGFVLKLYQMVNGAPDDIVSWVPSGEAFRITDLSRLESDTLPSYFRHSRFQSLVRQLNFYNFRKINRERTFWVYYHPLFHRDHPDKLCELRRRT 142
[Close]
BLAST of mRNA_Ecto-sp6_S_contig92.18409.1 vs. uniprot
Match: A0A7S1ZYH7_9STRA (Hypothetical protein (Fragment) n=4 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZYH7_9STRA)

HSP 1 Score: 118 bits (295), Expect = 1.670e-23
Identity = 53/94 (56.38%), Postives = 69/94 (73.40%), Query Frame = 2 
Query:  320 TSFVRKLFQMVQGECDSIVGFVADGTAFEVKDPRRLEQDILPKYFRHSRFQSLVRQLNFYSFKKISKERSVWIYKHAFFRRDEPELLHALKRKT 601
            + FV KLFQMV G  D ++ ++  G AF + D  RLE + LP +FRHSRFQSLVRQLNFY+F+K+++ER+ WIYKH  F RD P  LH L+R+T
Sbjct:   19 SGFVLKLFQMVNGAPDDVISWIPSGEAFRISDLNRLENETLPSFFRHSRFQSLVRQLNFYNFRKVNRERTFWIYKHPLFHRDRPYELHKLRRRT 112
[Close]
BLAST of mRNA_Ecto-sp6_S_contig92.18409.1 vs. uniprot
Match: B7G2S1_PHATC (Predicted protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G2S1_PHATC)

HSP 1 Score: 114 bits (286), Expect = 9.040e-23
Identity = 54/95 (56.84%), Postives = 73/95 (76.84%), Query Frame = 2 
Query:  320 TSFVRKLFQMVQGECDSIVGFVADGTAFEV-KDPRRLEQDILPKYFRHSRFQSLVRQLNFYSFKKISKERSVWIYKHAFFRRDEPELLHALKRKT 601
            + F+ KLFQMV G  D ++ +  +G AF +  D  RLE + LP+YFRH+RFQSLVRQLNFYSF+KI++ER+VWIYKH+ F RD PE L+ ++R+T
Sbjct:   28 SGFILKLFQMVNGAPDKVISWTPNGDAFIIGSDLNRLESETLPQYFRHNRFQSLVRQLNFYSFRKINRERNVWIYKHSLFHRDRPEDLNMVRRRT 122
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig92.18409.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPT6_ECTSI0.000e+083.60Heat Shock transcription factor n=1 Tax=Ectocarpus... [more]
A0A6H5L0A5_9PHAE0.000e+088.10HSF_DOMAIN domain-containing protein n=1 Tax=Ectoc... [more]
A0A7S2ANP9_9STRA1.220e-3271.88Hypothetical protein n=4 Tax=Dictyocha speculum Ta... [more]
A0A4D9D5W3_9STRA3.090e-2852.17HSF_DOMAIN domain-containing protein n=2 Tax=Monod... [more]
I2CQX2_NANGC1.030e-2754.24HSF_DOMAIN domain-containing protein (Fragment) n=... [more]
A0A4D9D0Y9_9STRA8.280e-2652.10HSF_DOMAIN domain-containing protein n=2 Tax=Monod... [more]
B8BWZ1_THAPS9.130e-2545.00HSF_DOMAIN domain-containing protein n=1 Tax=Thala... [more]
A0A7S2M136_9STRA1.810e-2454.72Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
A0A7S1ZYH7_9STRA1.670e-2356.38Hypothetical protein (Fragment) n=4 Tax=Ditylum br... [more]
B7G2S1_PHATC9.040e-2356.84Predicted protein n=3 Tax=Phaeodactylum tricornutu... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig92contigEcto-sp6_S_contig92:277889..285344 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score1174.5
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D7FPT6
Model size3472
Hectar predicted targeting categoryother localisation
Exons5
EggNOG free text desc.sequence-specific DNA binding
EggNOG OGsCOG5169@1,KOG0627@2759
Ec32 ortholog descriptionHeat Shock transcription factor
Ec32 orthologEc-18_001660.1
Cds size2802
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig92.18409.1prot_Ecto-sp6_S_contig92.18409.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig92 278094..284879 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350561.1561146-UTR-Ecto-sp6_S_contig92:277888..2780931682350561.1561146-UTR-Ecto-sp6_S_contig92:277888..278093Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig92 277889..278093 +
1682350561.2177708-UTR-Ecto-sp6_S_contig92:284879..2853441682350561.2177708-UTR-Ecto-sp6_S_contig92:284879..285344Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig92 284880..285344 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350561.1750543-CDS-Ecto-sp6_S_contig92:278093..2782771682350561.1750543-CDS-Ecto-sp6_S_contig92:278093..278277Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig92 278094..278277 +
1682350561.185449-CDS-Ecto-sp6_S_contig92:279259..2793901682350561.185449-CDS-Ecto-sp6_S_contig92:279259..279390Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig92 279260..279390 +
1682350561.1937551-CDS-Ecto-sp6_S_contig92:280547..2807441682350561.1937551-CDS-Ecto-sp6_S_contig92:280547..280744Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig92 280548..280744 +
1682350561.2019186-CDS-Ecto-sp6_S_contig92:282275..2838511682350561.2019186-CDS-Ecto-sp6_S_contig92:282275..283851Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig92 282276..283851 +
1682350561.2100606-CDS-Ecto-sp6_S_contig92:284165..2848791682350561.2100606-CDS-Ecto-sp6_S_contig92:284165..284879Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig92 284166..284879 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig92.18409.1

>prot_Ecto-sp6_S_contig92.18409.1 ID=prot_Ecto-sp6_S_contig92.18409.1|Name=mRNA_Ecto-sp6_S_contig92.18409.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=934bp
MVVALEHRHDRNEPDHDEDAYSRSGDVPGMDVVSAGSVTSFVRKLFQMVQ
GECDSIVGFVADGTAFEVKDPRRLEQDILPKYFRHSRFQSLVRQLNFYSF
KKISKERSVWIYKHAFFRRDEPELLHALKRKTNQHGAPARVGGGVAGLGV
GDGGADDMMVVDRVAPIVGGSLSRDPLDSNKARSRGLSFLPPRHADGGGS
AFRPPHHDYHHSPSFSNQHQEHHQHRPHYPHHRSSNGDRHSSRSSRPPHH
PHPAHRKNGSSSSGSGRMYRASSSRGAGGGPSTGGAAVPSYGGQGPSSRG
GAPDFAWAGAGGRPVSSSGGPGVDYDRRSGGVDGGNGNGMRATKAGGHRG
FDDGRSPSSSSSSQAYSRQGPAIGDDRGSALGRQRGCGNGGPAAAAAAGG
GAGGGGVTDKDHALALFGLSALCQVASATEAPAAHDKESIGQMDEDGGGG
SGGGGRGSRRLSDVVDRQPQKRHRGVGPEADAGSRRGWAAQESSGDDERE
EEEEDGVTSAERDDSSLSNHRRSPSNSSCVSSSSSSSNSLVSSADSSDGG
FERHHHGSTDNGVFVQPPPPPTTTTTTDAKKTVPRQQQQQRTSGSGGVFC
PTWDWGRAACEPAIRLPGSFVDRRFEEVDQQVVKDDDDDDDDESSRAEEE
EREQGESRQEFAQESDDEGPEARPDNGSAAHRRGAAMAITDEASPHVSVS
LAGSDEPRPTPTAAVPPRPRDAQADMKAEADVGLDGIGAFFSHCCSAAAP
GNDTTRASESVFLATVANSGDGGLREMAVFCAGPAGKAPDAAPAAYLARE
VSLFLQGEEAVAEDLRVYAEALDPAAVDVVVEGSLGSSSNPAAVTQPLSP
DGAKLLRVFCRFAACRLGRALEVASLVAESAEEAAAGGGGGGGDKAAEQQ
GLLLQRHGAFARRVAPQLDSCRWKWWRAAVRFS*
back to top

mRNA from alignment at Ecto-sp6_S_contig92:277889..285344+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig92.18409.1 ID=mRNA_Ecto-sp6_S_contig92.18409.1|Name=mRNA_Ecto-sp6_S_contig92.18409.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=7456bp|location=Sequence derived from alignment at Ecto-sp6_S_contig92:277889..285344+ (Ectocarpus species6 EcLAC_371)
GAGTCAACAGCCAGGCAAGGCTCAAAGACACCCTCCTGGCGCTTCTCCGA
CGCGAGCCACAGGCGCGTACATCCGCTTCAACCACTCGGGAGCAGTCGGC
AGTGGGATCTCCAGGCCGTTGGCCAGCGAGAGTGAGTGTGTTGAAGTTTT
CTGGAAACGCGAGACGTTTTCGTGATCCCTGCGTGGAACAAAGACAGCAG
CCGGGATGGTTGTAGCACTTGAGCACCGGCATGACCGGAACGAGCCAGAT
CACGACGAGGACGCCTACTCCCGCAGCGGCGACGTGCCCGGCATGGACGT
CGTGTCCGCTGGCTCCGTGACCTCCTTCGTGCGGAAGCTGTTCCAGATGG
TCCAGGGAGAGTGCGACAGCATCGTGGGCTTCGTCGCGGGTGAGCGAGAG
ACGTTTGACCTTTTTTTTTGTTTTTGGATTCGTACAGCCGAAACTGCACA
CGCGAGTACGTCGCCCTAATTCTTTGGCTGTGGGCGGGGGTTGAAGCGCA
GTGCGTTCGTGGGCGCAGCAAGGGTCGCAGGCACCTGGTCGAGGCTGTCA
CGGCGCGGGTGCAGGTCAGCAGCGCGCGAGACGTGTCTCCAGAGCTTGGG
TCTCTTCTCGGTGATTGTTGACGTGCCTTTGTCTCGCATGATCGCGCTTC
AAAAAAATGTTCTACGAAGAAACGTCGTTGGAACGAGACAGAGCGAGCGT
ACCAGGGAAATGTTCTGCACCTTCCTCGTGGCTGTCTGTCTCTCTCTCGC
GCGCTCACCGACATCGAGAGACTTGCGCCGCGCTGCTTGGGTGCCACCCA
CCCCTACTGCAGCAGAGCCTCCCCATGGCCAGCCGCTGCGCTGCTGATGC
TGCTGCTGCGCGCTGCTTCTGGCGGTTCTTCGCTGTTTTTTTATTTTTTG
AACAGACGTCACCCCATCACAAGTTGAACCCCAGCAAACCAACCACGTCT
CTTCGTGTCTGTCTCTCACGACCTGCGACCACGTACACGTGTTTGTTCAT
ATTCTGCTAGTTGACGCTTGGGGAGAGGGGTCGGGACGCGGGAAAGTAAC
CCACTGACACCCTCTCTCGAAGTGCTCTGCTGTCCCGCTGCTGATGGCGT
GTTGTGTGTGAATCGTGAGCATGATTTGTCTCTGTGTTGGTGCTGCTGGG
AAGAGAGAGCCTTTGTTCTTCCTTCCTTTTTCTGTTCCGCCGAAAGAGCT
TTGTGTTGGCTCCTTCAATTTGCATGATTTTTGTTGGTTGGGATCTATCT
CGGGATCGAAGAAATTCCGAGAGAGATAACATTTTGTTTTCGGTGCTGCT
GCTGCTGCTGCTGCTACCAAGACACCAACCACTGCCGTCCTTTTCCTGCA
CCCGTACCCTGGCTGTCTCAGATGGCACCGCGTTCGAAGTGAAGGACCCG
AGACGGCTGGAGCAGGACATCCTCCCAAAGTACTTCCGACACTCTAGGTT
CCAGAGCCTCGTGCGTCAGCTCAACTTCTACAGCTTCAAAAAGATCAGCA
AGGTTCGTGGTTTACACTCGTGTTGCTACCTAGCATACGGCCGGTGGTTG
GGGTTGGAACAACTACACAGGATCAAACATGCCAACCACAAGAGCACGAC
AACAGAGAGAGCCCGCTGCTGCGCCTCTTGTTCTGCAGCTGCACGCGTTG
ACGCGCATAGCCCAATATTGGTGGTGCTCTTGGGTGTTGATCAGCAGGGA
CGCGTGGTTCCCAGCCGACTGCAACGCGCCCCAGAAAAGATAGAGATTTT
TGTGTTTGATTCTTTGTGCGAGCAAGTCGACCGCCGAAAATTGAATCCAC
AGCAGCAGCAGTGGCGGCGGCGGCGGCGGCGATACCCCCTTGGTGCGGTC
GCTCCCGTGCCGTGCTCTCTCGACCGAAGTATGGCTCCGGGCGGCTGCTG
CTGCACTGCCGGATAAGAGATACTTGGTTCAACCCACGTGGGATTTCAGG
TGTTATTTTGTTCTTCAATCCATTCTCTCTCAGGACCAGGGACCCAGGAG
CGCTTTCTGTAGAAAGTTTTCGTTGTTGAACCAAAAACATGGAAAACGGG
TGGCTGGAGGGAGATGATAGTGCGTGGTTGAACATTCGGCGCATACAAAA
GTGGACAGCGAGTTCTCGCTCTTTCCACATTTTACAGAGGACGGGGGCGG
GTGCCAAGCTGCCGCAACACTGTGACAGCAGCAGCAGCAGCAGCACCCCC
GCCTCTTTTGGGGCAATCAATCAGTTTCCTCGAGGTCTGTTATTTCCAAG
TGGGCCACGTAGTTTTTTTTCCTGCGAAGAACGTGTTGCGCATATTCTCT
CTCTCTTTCATATGGTGGCATTTGCGGTTGCTGCTCCTTAACAGCGCAGT
ACACAAGACCACCACCCCAACAGCAGTACCGTCCTGACCACGAACTGACA
ATAATTATTTGCTGCGTTGATTGCTTTAGACATTCATTTTGTGCACACAC
ACACGAGATGCATCTCTTCCTATACTAGCAACACAACGCGTACTGCGGAG
TGTGGGTGCAAGCAGCATTTGCATCTGCGTACATGTGTTGAGTTGAAGTA
CACCATTGTTCAACGTTCCATGCATGCATACATTGCCGACCGAGCACTGA
CGCTTGTTGCGAGCACTGACGCTTGTTGCACCACACATAAATTCTGTGCG
AATTAGCAGGAGAGGAGCGTGTGGATCTACAAGCATGCGTTCTTCCGCAG
GGACGAGCCGGAGCTCTTGCACGCGCTCAAGCGCAAGACCAACCAGCATG
GGGCGCCGGCTCGCGTGGGCGGTGGCGTCGCAGGGCTTGGGGTCGGCGAC
GGCGGCGCGGATGACATGATGGTGGTGGACAGAGTCGCCCCGATTGTCGG
AGGAAGGTGTGATGTATATATATTGTCTGCCTGCTGTTGAATCATGATTC
TAGATACCAGCGTTTCTTTCAAAGATTCGTAGCGATGGCTTGGCGTTCAC
TTGTACAAGAAGCAGCACTGCTGTGTGTTATTTGTCGGATCAGATATCTC
AGCCCTGCCGGCGGGAGTTTTTTTTTTTTTACTTCACTTCAAATCAGCGC
TCACAGCACTTTTGCTGTTTACTCCAACCCGTGGTCACACAGAAGAGCCC
CTCTCTACCCTCCCCTCCTGCGGTACTTTGCCTTCGATTTTTAATGAGAG
AAAAGTTCAGCAATCTCTTCCCTCTGTGTACACACGAACTAGCGCTATCC
ACTAGACCAGAATCGGAAGCGAGATAAAAACTCACTTTGCAAGAAAAGCT
CGCTTACGCCGGGATTCGGACCCCTGACGGACCCCTGACCTGACCTCTGT
AAAATAGAATGTTTCGAGGATACCAACTGGACCACGGGGGCGACCGGGTA
CGGTTTACGTGCGTTCGAATTTTGGTTGAGTAATGTTTGATTTTCTGCGG
GAGCAATATTGGCGGGAGTGGAGATGAAACCTATGGAAACATCTGGCGTA
TCGTGGAAATGTCACCTTTCAGCTCGTCCTCGTGAGCGTGCTAATACCGC
TGCTCCGTACGCGGCAATATTTTATTTTGCTCGGTGACGTATGTACATCG
AtTTATCAGTTTGAAATGTTGAAGTTGGGGGCGGGGACGCCATGGAACGA
AAAATGTGCGAACAGCAGCAGCTTCCTTGTCCTCATGAAACATGATGCTC
AGCACTGATGAAAGTGTCGGTTTGCACGAGCCCTTTTTTGTATTGAAAAT
GCAAGGAGCTTTGCGTGTACCCAGGAACTACTGTATACTCTTGCCGTAGA
GTCGGTAAGATTCCAGTGATGAGTCGCTCGTTTTCCGCAAGTTTGGTGTT
TCTGTCCACCCTCTACCACTAATTCGTTCTTCATTCTGTTGCCCTGAGAG
ATGCTGAGTCATTAGCACACTCGGTGCTGCTGCTGTCACGTGTGTCATTT
GTTGACGCCGTGGGTTACATGCGTACAGTTGTCGCCCTAACTTGAGAACC
GGGGCGGCAAGAAATTCAGGCTGAACAAAAATCAATACTCACTGCTGTGT
GCTGCGCGGGAAATCGTGGAAAAACGAACCTTCGCTGACGCTATGGATTC
ATTGCTAACCTATCTCAAGACTCTTTGTTAGATAGAGATGGATTCGTTGG
GTCATACTGAGAAAATAAAAAAGTGCTTGAAAGTATTACCAGAACTGGGC
CAAAATGACAGGTGCTCAGTCAAGAAGCGTACACTAAAACCTATATATTC
ACTGTTCGGGTACCCCGTATGGAGAAAAAAGAGAAACAAGCCTCGACCGA
AAGAAAAGGTAACTGTTCAGTACGCAATGGTTCATGTCCAACTGTCCTGT
CCTACTTGTGCTTGTTTCATTTATTTACCACACCCCTCCGATGTCCGTCC
GCGTCTGAACTTGCTGCTATCCTCTCCGCGCATCTAGTCTCTCTCGCGAC
CCACTCGACAGCAACAAGGCGAGATCCCGCGGCCTCAGCTTCCTGCCCCC
CCGCCACGCGGACGGCGGCGGCAGCGCCTTCCGGCCCCCTCACCACGACT
ACCACCACAGCCCTTCGTTCAGCAACCAACACCAAGAGCACCACCAGCAC
CGCCCCCACTACCCTCATCACCGCAGCAGCAACGGCGACCGTCACTCCAG
CAGAAGCAGCAGGCCACCGCACCACCCGCACCCCGCTCACCGCAAGAACG
GCAGCAGCAGCAGCGGCAGCGGCAGGATGTACCGCGCTTCGTCGTCCCGG
GGCGCCGGCGGCGGGCCGTCCACGGGCGGCGCGGCCGTCCCGTCCTACGG
GGGGCAGGGGCCTTCTTCCCGTGGCGGAGCCCCCGACTTCGCGTGGGCGG
GAGCGGGGGGTCGTCCGGTCTCTTCTAGCGGTGGTCCCGGCGTGGATTAC
GATCGCCGCAGCGGCGGCGTCGACGGCGGCAACGGCAACGGCATGCGCGC
GACCAAGGCGGGGGGGCACCGCGGATTCGACGACGGTCGGTCCCCGTCGT
CGTCGTCATCGTCCCAGGCCTACAGTCGGCAGGGCCCCGCGATAGGCGAC
GACAGGGGAAGCGCGCTCGGCCGGCAACGCGGATGCGGCAATGGGGGGCC
CGCTGCTGCTGCTGCTGCTGGCGGTGGTGCCGGTGGCGGCGGTGTCACGG
ACAAGGACCACGCGTTGGCCCTGTTTGGCCTCTCCGCGCTCTGCCAGGTG
GCCTCGGCGACGGAGGCTCCCGCCGCCCACGACAAGGAGTCGATCGGGCA
GATGGACGAGGACGGCGGTGGCGGTAGCGGCGGCGGTGGCCGCGGCTCCC
GGCGTTTGTCCGACGTCGTAGATCGACAGCCACAAAAGCGCCACCGGGGG
GTAGGCCCGGAGGCGGACGCGGGTAGCCGGCGAGGGTGGGCGGCGCAGGA
GTCATCGGGCGACGACGAGAGGGAAGAGGAGGAGGAGGACGGTGTCACGA
GTGCCGAGCGCGACGACTCTAGCTTGTCGAACCACCGCCGCAGCCCCAGC
AACAGCAGCTGCGTCAGCAGCAGCAGCAGCAGCAGCAACAGCCTGGTGAG
CAGCGCTGACAGCTCCGACGGCGGTTTTGAACGCCACCACCACGGTAGCA
CTGACAACGGCGTCTTCGTGCAGCCGCCGCCGCCGCCGACGACGACAACG
ACGACCGACGCTAAGAAAACAGTCCCTCGGCAGCAGCAGCAGCAACGGAC
TAGCGGCAGCGGAGGCGTGTTCTGCCCGACGTGGGACTGGGGACGCGCCG
CGTGCGAGCCGGCCATCAGGCTACCGGGCTCCTTCGTAGACCGTCGTTTC
GAGGAGGTGGACCAGCAGGTGGTCAAGGACGATGACGATGACGACGATGA
CGAGTCGAGCAGGGCCGAGGAGGAAGAAAGAGAACAGGGCGAGAGCAGAC
AGGAGTTCGCACAGGAATCGGACGACGAAGGACCTGAGGCCAGGCCCGAC
AATGGCAGTGCAGCACACCGCAGAGGGGCGGCGATGGCGATAACGGACGA
GGCAAGTCCTCATGTACTGCTGTCATTTTTTTTTTGCAATTTTTGTTTCG
CGTTTCGTCGCAAGGCCGAACAAGGTCTCGGCGTTTGATTGCGTTTAGGA
TCAGCAATCCGAGGAACCAGAAATGCACAAGAGACGTAGGTGCGTGCATC
CCGTTGTTTTCGCGTGCGTCAACGCAGAGAGAGCCGAGAGCACGAGGAAC
GAAGGTGCACAGCCAAGGCAAATTTGGCACCACGCTAACACTCTTCATCC
CCACACACCAGCTTGCAAAAATAACCCAATCCCTCCCCCCCCTTCCCTTT
TCGGCCATTCTTGATACAAACCAGCAGGTTTCGGTGTCCCTCGCGGGGAG
CGACGAGCCCCGGCCAACCCCTACCGCCGCCGTCCCACCGCGGCCGCGAG
ACGCGCAGGCGGACATGAAAGCGGAAGCCGACGTCGGCCTCGACGGCATC
GGCGCGTTCTTCTCGCACTGCTGCTCCGCCGCCGCTCCCGGCAACGACAC
CACGAGGGCGTCGGAGTCGGTGTTCCTCGCCACCGTTGCTAACAGCGGGG
ACGGCGGGCTGCGCGAGATGGCGGTGTTCTGCGCCGGCCCGGCCGGCAAG
GCTCCCGACGCCGCTCCCGCGGCGTACCTCGCCCGGGAGGTGTCCCTCTT
CCTCCAGGGTGAGGAAGCCGTCGCGGAGGACCTCCGCGTGTACGCGGAGG
CCCTCGACCCCGCCGCCGTGGACGTTGTGGTGGAGGGGAGCCTGGGGAGC
AGCAGCAATCCGGCGGCGGTAACGCAGCCGTTGTCGCCGGACGGCGCGAA
ACTTCTGCGCGTTTTCTGCCGGTTCGCGGCGTGCCGGCTCGGACGCGCGC
TCGAGGTGGCGTCGCTGGTGGCGGAGTCGGCGGAAGAAGCCGCCGCTGGC
GGCGGCGGTGGCGGCGGCGACAAGGCCGCGGAGCAGCAGGGGCTGCTGCT
GCAGCGGCACGGCGCCTTCGCGCGGCGGGTTGCGCCGCAGCTGGACTCGT
GCCGGTGGAAGTGGTGGCGCGCTGCCGTTCGCTTCAGCTGAGGGAGATAG
GCATCGATCGTGGGCTTTCTTGGGTCTTCGGGCGACAGGGGTAACGGTTG
AAGTCTCGTCGAGAGCCTCGTGCCCGCCCGTGGCCCCGCTCTTGGATCAC
CGCCCGAAAAGAAAACAAGGCCGCAGTCTGTTGCGGTGTTCTCGCTCGTA
CCCCAGAAGACGAAAAGGAGGGGCTTGGATAAGAAGGGGGAGGTCACATA
ACACAATGTTAGAGGGTAGACAAAGATATTTTTTCGCGCGTCGCCTGTGG
GTGCTACGCCGGGCGATATACATGTGGGGTGGAACAGGCGCTATTGATTG
CTGCTGCTTTTCAAAATATGTTGTGCGCATTTCGTGTGTGGTACTGTTTT
TGTCTCATAGAAGAGAAATCTATGCGTGCTCTGACGTTTTTTTGATGTGA
AGATCGTCGCCATTTTTCAATAAAGAAAAGGGGTGGAAATGTCTAGAGGG
GGCGTA
back to top

Coding sequence (CDS) from alignment at Ecto-sp6_S_contig92:277889..285344+

>mRNA_Ecto-sp6_S_contig92.18409.1 ID=mRNA_Ecto-sp6_S_contig92.18409.1|Name=mRNA_Ecto-sp6_S_contig92.18409.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=2802bp|location=Sequence derived from alignment at Ecto-sp6_S_contig92:277889..285344+ (Ectocarpus species6 EcLAC_371)
ATGGTTGTAGCACTTGAGCACCGGCATGACCGGAACGAGCCAGATCACGA
CGAGGACGCCTACTCCCGCAGCGGCGACGTGCCCGGCATGGACGTCGTGT
CCGCTGGCTCCGTGACCTCCTTCGTGCGGAAGCTGTTCCAGATGGTCCAG
GGAGAGTGCGACAGCATCGTGGGCTTCGTCGCGGATGGCACCGCGTTCGA
AGTGAAGGACCCGAGACGGCTGGAGCAGGACATCCTCCCAAAGTACTTCC
GACACTCTAGGTTCCAGAGCCTCGTGCGTCAGCTCAACTTCTACAGCTTC
AAAAAGATCAGCAAGGAGAGGAGCGTGTGGATCTACAAGCATGCGTTCTT
CCGCAGGGACGAGCCGGAGCTCTTGCACGCGCTCAAGCGCAAGACCAACC
AGCATGGGGCGCCGGCTCGCGTGGGCGGTGGCGTCGCAGGGCTTGGGGTC
GGCGACGGCGGCGCGGATGACATGATGGTGGTGGACAGAGTCGCCCCGAT
TGTCGGAGGAAGTCTCTCTCGCGACCCACTCGACAGCAACAAGGCGAGAT
CCCGCGGCCTCAGCTTCCTGCCCCCCCGCCACGCGGACGGCGGCGGCAGC
GCCTTCCGGCCCCCTCACCACGACTACCACCACAGCCCTTCGTTCAGCAA
CCAACACCAAGAGCACCACCAGCACCGCCCCCACTACCCTCATCACCGCA
GCAGCAACGGCGACCGTCACTCCAGCAGAAGCAGCAGGCCACCGCACCAC
CCGCACCCCGCTCACCGCAAGAACGGCAGCAGCAGCAGCGGCAGCGGCAG
GATGTACCGCGCTTCGTCGTCCCGGGGCGCCGGCGGCGGGCCGTCCACGG
GCGGCGCGGCCGTCCCGTCCTACGGGGGGCAGGGGCCTTCTTCCCGTGGC
GGAGCCCCCGACTTCGCGTGGGCGGGAGCGGGGGGTCGTCCGGTCTCTTC
TAGCGGTGGTCCCGGCGTGGATTACGATCGCCGCAGCGGCGGCGTCGACG
GCGGCAACGGCAACGGCATGCGCGCGACCAAGGCGGGGGGGCACCGCGGA
TTCGACGACGGTCGGTCCCCGTCGTCGTCGTCATCGTCCCAGGCCTACAG
TCGGCAGGGCCCCGCGATAGGCGACGACAGGGGAAGCGCGCTCGGCCGGC
AACGCGGATGCGGCAATGGGGGGCCCGCTGCTGCTGCTGCTGCTGGCGGT
GGTGCCGGTGGCGGCGGTGTCACGGACAAGGACCACGCGTTGGCCCTGTT
TGGCCTCTCCGCGCTCTGCCAGGTGGCCTCGGCGACGGAGGCTCCCGCCG
CCCACGACAAGGAGTCGATCGGGCAGATGGACGAGGACGGCGGTGGCGGT
AGCGGCGGCGGTGGCCGCGGCTCCCGGCGTTTGTCCGACGTCGTAGATCG
ACAGCCACAAAAGCGCCACCGGGGGGTAGGCCCGGAGGCGGACGCGGGTA
GCCGGCGAGGGTGGGCGGCGCAGGAGTCATCGGGCGACGACGAGAGGGAA
GAGGAGGAGGAGGACGGTGTCACGAGTGCCGAGCGCGACGACTCTAGCTT
GTCGAACCACCGCCGCAGCCCCAGCAACAGCAGCTGCGTCAGCAGCAGCA
GCAGCAGCAGCAACAGCCTGGTGAGCAGCGCTGACAGCTCCGACGGCGGT
TTTGAACGCCACCACCACGGTAGCACTGACAACGGCGTCTTCGTGCAGCC
GCCGCCGCCGCCGACGACGACAACGACGACCGACGCTAAGAAAACAGTCC
CTCGGCAGCAGCAGCAGCAACGGACTAGCGGCAGCGGAGGCGTGTTCTGC
CCGACGTGGGACTGGGGACGCGCCGCGTGCGAGCCGGCCATCAGGCTACC
GGGCTCCTTCGTAGACCGTCGTTTCGAGGAGGTGGACCAGCAGGTGGTCA
AGGACGATGACGATGACGACGATGACGAGTCGAGCAGGGCCGAGGAGGAA
GAAAGAGAACAGGGCGAGAGCAGACAGGAGTTCGCACAGGAATCGGACGA
CGAAGGACCTGAGGCCAGGCCCGACAATGGCAGTGCAGCACACCGCAGAG
GGGCGGCGATGGCGATAACGGACGAGGCAAGTCCTCATGTTTCGGTGTCC
CTCGCGGGGAGCGACGAGCCCCGGCCAACCCCTACCGCCGCCGTCCCACC
GCGGCCGCGAGACGCGCAGGCGGACATGAAAGCGGAAGCCGACGTCGGCC
TCGACGGCATCGGCGCGTTCTTCTCGCACTGCTGCTCCGCCGCCGCTCCC
GGCAACGACACCACGAGGGCGTCGGAGTCGGTGTTCCTCGCCACCGTTGC
TAACAGCGGGGACGGCGGGCTGCGCGAGATGGCGGTGTTCTGCGCCGGCC
CGGCCGGCAAGGCTCCCGACGCCGCTCCCGCGGCGTACCTCGCCCGGGAG
GTGTCCCTCTTCCTCCAGGGTGAGGAAGCCGTCGCGGAGGACCTCCGCGT
GTACGCGGAGGCCCTCGACCCCGCCGCCGTGGACGTTGTGGTGGAGGGGA
GCCTGGGGAGCAGCAGCAATCCGGCGGCGGTAACGCAGCCGTTGTCGCCG
GACGGCGCGAAACTTCTGCGCGTTTTCTGCCGGTTCGCGGCGTGCCGGCT
CGGACGCGCGCTCGAGGTGGCGTCGCTGGTGGCGGAGTCGGCGGAAGAAG
CCGCCGCTGGCGGCGGCGGTGGCGGCGGCGACAAGGCCGCGGAGCAGCAG
GGGCTGCTGCTGCAGCGGCACGGCGCCTTCGCGCGGCGGGTTGCGCCGCA
GCTGGACTCGTGCCGGTGGAAGTGGTGGCGCGCTGCCGTTCGCTTCAGCT
GA
back to top