mRNA_Ecto-sp6_S_contig92.18407.1 (mRNA) Ectocarpus species6 EcLAC_371
|
Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig92.18407.1 vs. uniprot
Match: A0A6H5KZP9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZP9_9PHAE) HSP 1 Score: 291 bits (744), Expect = 2.650e-99 Identity = 146/147 (99.32%), Postives = 146/147 (99.32%), Query Frame = 1
Query: 37 MTMEVSPGLQEFCQKILQRAPNVRAVLIGTADGTPIVNALRKDVENKSFTDHLERELAQHFALAAVQADKMGMGNLRYTVTFYPQACLVHVNLAPLVVTLVHQDGQDDSRDKLNFGDALDLIPEMSDALEPLRKQVLRACWEENSAA 477
MTMEVSPGLQEFCQKILQRAPNVRAVLIGTADGTPIVNALRKDVENKSFTDHLERELAQHFALAAVQADKMGMGNLRYTVTFYPQACLVHVNLAPLVVTLVHQDGQDDSRDKLNFGDALDLIPEMSDALEPLRKQVLRA WEENSAA
Sbjct: 1 MTMEVSPGLQEFCQKILQRAPNVRAVLIGTADGTPIVNALRKDVENKSFTDHLERELAQHFALAAVQADKMGMGNLRYTVTFYPQACLVHVNLAPLVVTLVHQDGQDDSRDKLNFGDALDLIPEMSDALEPLRKQVLRAYWEENSAA 147
BLAST of mRNA_Ecto-sp6_S_contig92.18407.1 vs. uniprot
Match: A0A7S2Y003_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y003_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 6.530e-20 Identity = 47/104 (45.19%), Postives = 69/104 (66.35%), Query Frame = 1
Query: 46 EVSPGLQEFCQKILQRAPNVRAVLIGTADGTPIVNALR-----KDVENKSFTDHLERELAQHFALA-AVQADKMGMGNLRYTVTFYPQACLVHVNLAPLVVTLV 339
EV+P LQ+FC+++L R P++ A+LI T+DG IV ++R + + + LE LA++FA+A A QA K+G+G L+ FY LVHVNL+PLV+TLV
Sbjct: 5 EVNPALQDFCERVLARIPSIDAILISTSDGVSIVKSVRGGGLVESAGGRKPAEELESGLARYFAMAVADQAGKVGLGGLKTITAFYNTLALVHVNLSPLVLTLV 108
BLAST of mRNA_Ecto-sp6_S_contig92.18407.1 vs. uniprot
Match: A0A836CDC5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDC5_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 1.570e-19 Identity = 48/114 (42.11%), Postives = 69/114 (60.53%), Query Frame = 1
Query: 109 AVLIGTADGTPIVNALRKD--VENKSFTDHLERELAQHFALAAVQADKMGMGNLRYTVTFYPQACLVHVNLAPLVVTLVHQDGQDDSRDKLNFGDALDLIPEMSDALEPLRKQV 444
A+++ T DG P+ A+R VE ++ +ER L+ + A AA QA KMG+G L+ T T Y + CLVHV + PLV+T VH N G LD++PE+ +AL+P+R QV
Sbjct: 9 AIVVSTGDGVPLCRAVRPGAAVEPEALAG-IERRLSHYCAAAAEQAQKMGLGPLKVTTTLYDKLCLVHVYMLPLVITCVHSPDS-------NCGTTLDIVPELREALDPIRAQV 114
BLAST of mRNA_Ecto-sp6_S_contig92.18407.1 vs. uniprot
Match: D7FPT7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPT7_ECTSI) HSP 1 Score: 70.1 bits (170), Expect = 2.450e-13 Identity = 33/33 (100.00%), Postives = 33/33 (100.00%), Query Frame = 1
Query: 52 SPGLQEFCQKILQRAPNVRAVLIGTADGTPIVN 150
SPGLQEFCQKILQRAPNVRAVLIGTADGTPIVN
Sbjct: 11 SPGLQEFCQKILQRAPNVRAVLIGTADGTPIVN 43
BLAST of mRNA_Ecto-sp6_S_contig92.18407.1 vs. uniprot
Match: K3X7C8_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X7C8_GLOUD) HSP 1 Score: 70.5 bits (171), Expect = 1.510e-12 Identity = 44/137 (32.12%), Postives = 70/137 (51.09%), Query Frame = 1
Query: 34 MMTMEVSPGLQEFCQKILQRAPNVRAVLIGTADGTPIVNALRKDVENKSFTDHLERELAQHFALAAVQADKMGMGNLRYTVTFYPQACLVHVNLAPLVVTLVHQDGQDDSRDKLNFGDALDLIPEMSDALEPLRKQV 444
MM E+SP L E +L R + A+L+ T++G P++ + + + D+ E L FA AA Q K+ G ++ +F+ L+H+N APLV+TLV + + + G L E+ AL PL+K V
Sbjct: 1 MMGAELSPVLVEQLNTVLDRFEALEAILVCTSEGVPLLKVMADEEKATLAYDYAETVLPTVFAGAAEQIGKLKFGAVQTVTSFFDNVVLIHINNAPLVITLV-------ASNSAHIGALQALASELRPALSPLKKAV 130
BLAST of mRNA_Ecto-sp6_S_contig92.18407.1 vs. uniprot
Match: A0A7S2APW0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2APW0_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 1.310e-11 Identity = 35/136 (25.74%), Postives = 77/136 (56.62%), Query Frame = 1
Query: 79 KILQRAPNVRAVLIGTADGTPIVNALR----KDVENKSFTDHLERELAQHFALAAVQADKMGMGNLRYTVTFYPQACLVHVNLAPLVVTLVHQDGQDDSRDKLNFGDALDLIPEMSDALEPLRKQVLRACWEENSA 474
++++ ++ A+L+ T G P+++ ++ K ++++F + E ++ F++ AVQ +KM +G +R FY L+HVN++PLV+TL+ + G N G L ++P ++++LEP+ + + ++
Sbjct: 9 QVVEWQHDLEALLVSTVSGVPLMHFVKGPDGKSTQSETFGSN-ELHMSALFSITAVQIEKMELGAVRSVTAFYQNMMLIHVNISPLVLTLIAKPGA-------NAGALLAMVPSLNESLEPISAAAAETVFSQTTS 136
BLAST of mRNA_Ecto-sp6_S_contig92.18407.1 vs. uniprot
Match: A0A6V1R4B5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1R4B5_HETAK) HSP 1 Score: 67.8 bits (164), Expect = 2.050e-11 Identity = 39/97 (40.21%), Postives = 52/97 (53.61%), Query Frame = 1
Query: 58 GLQEFCQKILQRAPNVRAVLIGTADGTPIVNALRKDVENKSFTD---HLERELAQHFALAAVQADKMGMGNLRYTVTFYPQACLVHVNLAPLVVTLV 339
LQ C ++L R V+A++I T+DG I + R LE +A++FA AA QA KM +G L+ FY L H+NL PLVVTLV
Sbjct: 10 SLQSLCSRLLNRYDEVQAIVISTSDGVTIACSARDGXXXXXXXXXARRLEAGVARYFAGAADQAGKMNLGQLQSITAFYENLMLYHINLLPLVVTLV 106
BLAST of mRNA_Ecto-sp6_S_contig92.18407.1 vs. uniprot
Match: A0A7S0MJ25_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MJ25_9CRYP) HSP 1 Score: 65.1 bits (157), Expect = 1.480e-10 Identity = 40/131 (30.53%), Postives = 66/131 (50.38%), Query Frame = 1
Query: 58 GLQEFCQKILQRAPNVRAVLIGTADGTPIVNALRKDVENKSFTDHLERELAQHFALAAVQADKMGMGNLRYTVTFYPQACLVHVNLAPLVVTLVHQDGQDDSRDKLNFGDALDLIPEMSDALEPLRKQVLR 450
L +++R P +R V++ DG P++ + + + T E A FA+AA Q K+ MG + T Y +VH+N++PL+VT+V S +N L L P+++ ALEP+R V +
Sbjct: 3 NLDSGLSSVVERVPGLRVVVVSGGDGIPLLKYPHEPLPSDGSTSLGTLESA--FAIAADQVSKLEMGRSKTITTMYQNQVVVHMNMSPLIVTMV-------SDSDVNIAVLLALAPKLALALEPIRSAVAK 124
BLAST of mRNA_Ecto-sp6_S_contig92.18407.1 vs. uniprot
Match: H3GIG4_PHYRM (Uncharacterized protein n=18 Tax=Phytophthora TaxID=4783 RepID=H3GIG4_PHYRM) HSP 1 Score: 65.1 bits (157), Expect = 1.770e-10 Identity = 43/133 (32.33%), Postives = 68/133 (51.13%), Query Frame = 1
Query: 46 EVSPGLQEFCQKILQRAPNVRAVLIGTADGTPIVNALRKDVENKSFTDHLERELAQHFALAAVQADKMGMGNLRYTVTFYPQACLVHVNLAPLVVTLVHQDGQDDSRDKLNFGDALDLIPEMSDALEPLRKQV 444
E+SP LQE +L R + A+L+ T++G P++ ++ S+ ++ E L FA AA Q K+ G ++ F+ L+H+N APLV+TLV + + G L E+ AL PL+K V
Sbjct: 6 EMSPILQEKLNDVLSRYDALEAILVCTSEGVPLLKVSAEEKSELSY-EYTETVLPTVFAGAAEQVGKLKFGAVQSVTAFFDDVVLIHINHAPLVITLVAPNSP-------HTGALHALASELRPALTPLKKCV 130
BLAST of mRNA_Ecto-sp6_S_contig92.18407.1 vs. uniprot
Match: A0A0P1AK10_PLAHL (Ragulator complex protein lamtor3-a-like n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AK10_PLAHL) HSP 1 Score: 63.9 bits (154), Expect = 4.890e-10 Identity = 42/133 (31.58%), Postives = 68/133 (51.13%), Query Frame = 1
Query: 46 EVSPGLQEFCQKILQRAPNVRAVLIGTADGTPIVNALRKDVENKSFTDHLERELAQHFALAAVQADKMGMGNLRYTVTFYPQACLVHVNLAPLVVTLVHQDGQDDSRDKLNFGDALDLIPEMSDALEPLRKQV 444
E+SP L+E +L R + A+L+ T++G P++ ++ S+ + E L+ FA AA Q K+ +G ++ F+ L+H+N APLV+TLV + G L E+ AL PL+K V
Sbjct: 6 EMSPILKEKLNDVLSRYDALEAILVCTSEGVPLLTVSAEEESELSY-ECTETVLSTVFAGAAEQVGKLKLGAVQTVTAFFDDVVLIHINHAPLVITLVASNSP-------QIGALQALANELRPALTPLKKCV 130 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig92.18407.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig92.18407.1 >prot_Ecto-sp6_S_contig92.18407.1 ID=prot_Ecto-sp6_S_contig92.18407.1|Name=mRNA_Ecto-sp6_S_contig92.18407.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=160bp HKRSVLPTCSWMMTMEVSPGLQEFCQKILQRAPNVRAVLIGTADGTPIVNback to top mRNA from alignment at Ecto-sp6_S_contig92:255826..263734- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig92.18407.1 ID=mRNA_Ecto-sp6_S_contig92.18407.1|Name=mRNA_Ecto-sp6_S_contig92.18407.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=7909bp|location=Sequence derived from alignment at Ecto-sp6_S_contig92:255826..263734- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig92:255826..263734- >mRNA_Ecto-sp6_S_contig92.18407.1 ID=mRNA_Ecto-sp6_S_contig92.18407.1|Name=mRNA_Ecto-sp6_S_contig92.18407.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=480bp|location=Sequence derived from alignment at Ecto-sp6_S_contig92:255826..263734- (Ectocarpus species6 EcLAC_371)back to top |