mRNA_Ecto-sp6_S_contig92.18405.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig92.18405.1 vs. uniprot
Match: A0A6H5KZX5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZX5_9PHAE) HSP 1 Score: 570 bits (1468), Expect = 5.170e-203 Identity = 290/321 (90.34%), Postives = 295/321 (91.90%), Query Frame = 1
Query: 49 MANPTQPGIKVINKDFKRDDNDTVLCTDRVEVEFDGVTLDLAQSWENGEEMAPIFSGACWAGTVVWPAALDLCDYMSEHLRQAMVGATVVELGCGIGVPGMVARLLGATVVLTEQDELLSLLDRNLDGNFAGHPRGEGGIRREALDWEREADTDGLLASLERSGIAPGEAEREPGAGVRRRSTRLDFVLCADCVFEPLYGDSWKALAKVMGRLSDAGTTVLCSVERRGVDGVPEFLRACKAEGFSLQTVYRAAPSAPAPVELYEFSKGVFRGEAVAVVESDGGTEGGDGKGKPMEGEGGGALEVVDGGAVSPGAGSKSTAR 1011
MANPTQPGIKVINKDFKRD NDTVLCTDRVEVEFDGVTLDLAQSWENGEEMAPIFSGACWAGTVVWPAALDLCDYMSEHLRQA+VGATVVELGCG+ DELLSLLDRNLDGNFAGHPRGEGGIRREALDWEREADTDGLLAS+ERSG PGEAE EPGAGVRRRSTRLDFVLCADCVFEPLYGDSWKALAKVMGRLSDAGTTVLCSVERRGVDGVP+FLRAC+AEGFSLQTVYRAAPSA A VELYEFSKGVFRGEAVAVVESDGG EGGDGKGKPMEGEGGGALEVVDGGAVSPGAGSKSTAR
Sbjct: 1 MANPTQPGIKVINKDFKRDVNDTVLCTDRVEVEFDGVTLDLAQSWENGEEMAPIFSGACWAGTVVWPAALDLCDYMSEHLRQALVGATVVELGCGMF------------------DELLSLLDRNLDGNFAGHPRGEGGIRREALDWEREADTDGLLASMERSGTVPGEAEGEPGAGVRRRSTRLDFVLCADCVFEPLYGDSWKALAKVMGRLSDAGTTVLCSVERRGVDGVPDFLRACEAEGFSLQTVYRAAPSASAQVELYEFSKGVFRGEAVAVVESDGGMEGGDGKGKPMEGEGGGALEVVDGGAVSPGAGSKSTAR 303
BLAST of mRNA_Ecto-sp6_S_contig92.18405.1 vs. uniprot
Match: D7FPU0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPU0_ECTSI) HSP 1 Score: 566 bits (1460), Expect = 6.840e-202 Identity = 284/288 (98.61%), Postives = 285/288 (98.96%), Query Frame = 1
Query: 148 FDGVTLDLAQSWENGEEMAPIFSGACWAGTVVWPAALDLCDYMSEHLRQAMVGATVVELGCGIGVPGMVARLLGATVVLTEQDELLSLLDRNLDGNFAGHPRGEGGIRREALDWEREADTDGLLASLERSGIAPGEAEREPGAGVRRRSTRLDFVLCADCVFEPLYGDSWKALAKVMGRLSDAGTTVLCSVERRGVDGVPEFLRACKAEGFSLQTVYRAAPSAPAPVELYEFSKGVFRGEAVAVVESDGGTEGGDGKGKPMEGEGGGALEVVDGGAVSPGAGSKSTAR 1011
FDGVTLDLAQSWENGEEMAPIFSGACWAGTVVWPAALDLCDYMSEHLRQAMVGATVVELGCGIGVPGMVARLLGATVVLTEQDELLSLLDRNLDGNFAGHPRGEGGIRREALDWEREADTDGLLASLERSG APGEAE EPGAGVRRRSTRLDFVLCADCVFEPLYGDSWKALAKVMGRLSDAGTTVLCSVERRGVDGVPEFLRAC+AEGFSLQTVYRAAPSAPAPVELYEFSKGVFRGEAVAVVESDGG EGGDGKGKPMEGEGGGALEVVDGGAVSPGAGSKSTAR
Sbjct: 10 FDGVTLDLAQSWENGEEMAPIFSGACWAGTVVWPAALDLCDYMSEHLRQAMVGATVVELGCGIGVPGMVARLLGATVVLTEQDELLSLLDRNLDGNFAGHPRGEGGIRREALDWEREADTDGLLASLERSGTAPGEAEGEPGAGVRRRSTRLDFVLCADCVFEPLYGDSWKALAKVMGRLSDAGTTVLCSVERRGVDGVPEFLRACEAEGFSLQTVYRAAPSAPAPVELYEFSKGVFRGEAVAVVESDGGMEGGDGKGKPMEGEGGGALEVVDGGAVSPGAGSKSTAR 297
BLAST of mRNA_Ecto-sp6_S_contig92.18405.1 vs. uniprot
Match: A0A836CJX9_9STRA (Putative methyltransferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJX9_9STRA) HSP 1 Score: 165 bits (418), Expect = 3.420e-45 Identity = 101/214 (47.20%), Postives = 122/214 (57.01%), Query Frame = 1
Query: 214 SGACWAGTVVWPAALDLCDYMSEH-LRQAMVGATVVELGCGIGVPGMVARLLGATVVLTEQDELLSLLDRNLDGNF--AGHPRGEGGIRREALDWEREADTDGLLASLERSGIAPGEAEREPGAGVRRR--STRLDFVLCADCVFEPLYGDSWKALAKVMGRLSDAGTTVLCSVERRGVDGVPEFLRACKAEGFSLQTVYRAAPSAPAPVELYE 840
+GACWAGT+VW AALDL DY+S H Q GATVVELGCGIGVPGMVA LLGA+ VLTEQ ELL LL RNL NF A + RR + A D A +P A +R DF+L ADC++EPLYG+SWKAL + L T L VERR DG+ FL A + G + T+ A+ ++ P+ELYE
Sbjct: 30 AGACWAGTIVWQAALDLSDYLSRHHAGQLAGGATVVELGCGIGVPGMVAHLLGASAVLTEQAELLGLLRRNLAANFGVAHASASQVSSRRRTAPFISAAQLDW--------------ATDDPRALLRDHFEGAHPDFILSADCIYEPLYGESWKALVTALRGLCGPHTRALVCVERRTADGINGFLDAARGAGLEV-TLPHASGASGVPIELYE 228
BLAST of mRNA_Ecto-sp6_S_contig92.18405.1 vs. uniprot
Match: A0A2R5G0X5_9STRA (Protein N-lysine methyltransferase METTL21A n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G0X5_9STRA) HSP 1 Score: 148 bits (374), Expect = 5.430e-38 Identity = 96/234 (41.03%), Postives = 124/234 (52.99%), Query Frame = 1
Query: 151 DGVTLDLAQSWENGEEMAPIFSGACWAGTVVWPAALDLCDYMSEHLRQAMVGATVVELGCGIGVPGMVARLLGAT-VVLTEQDELLSLLDRNLDGNFAGH-PRGEGGIRREALDWEREADTDGLLASLERSGIAPGEAEREPGAGVRRRSTRLDFVLCADCVFEPLYGDSWKALAKVMGRLS--DAGTTVLCSVERRGVDGVPEFLRACKAEGFSLQTVYRAAPSAPAPVELYE 840
DG L+L ++ E + PIFSGACWAGTVVWPAAL LC+++ + + + V+ELG G+GVPGMV +LLGA V+LTEQD L LL RN+D NFA PR + LDWE EP D +L +DCV++ LYGDSW+ALA + LS T L ++ERR DGV EFL C+ G + + +ELYE
Sbjct: 98 DGKMLELELTFPE-ESIQPIFSGACWAGTVVWPAALLLCEHL-KTMADTVKDQRVLELGSGLGVPGMVCQLLGAKEVILTEQDPLPELLRRNVDANFANDAPR----PLVDTLDWE------------------------EPEESSTNAQEPFDLILISDCVYQELYGDSWRALADCIKALSRPKRATLTLNALERRKADGVDEFLAYCREIGVCHKRIQTLMGPENEQLELYE 301
BLAST of mRNA_Ecto-sp6_S_contig92.18405.1 vs. uniprot
Match: F0X125_9STRA (Uncharacterized protein AlNc14C546G12115 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0X125_9STRA) HSP 1 Score: 145 bits (366), Expect = 2.890e-37 Identity = 97/260 (37.31%), Postives = 132/260 (50.77%), Query Frame = 1
Query: 109 NDTVLCTDRVEVEFDGVTLDLAQSWENGEEMAPIFSGACWAGTVVWPAALDLCDYMSEH----LRQAMVGATVVELGCGIGVPGMVARLLGA-TVVLTEQDELLSLLDRNLDGNF------AGHPRGEGGIRREALDWEREADTDGLLASLERSGIAPGEAEREPGAGVRRRSTRLDFVLCADCVFEPLYGDSWKALAKVMGRLSDAGTT--VLCSVERRGVDGVPEFLRACKAEGFSLQTVY-RAAPSAPAPVELYEFS 846
ND + VEV +G T EE+AP+FSGA WAGTVVW AA+ L Y H LR + V+ELG GIGVPGM AR+ GA +V+LTEQ++L+ L+ RNL GN A + + E I L W +E+ + L+ + ++DFVL DC+F PLYGDSWKALA M + + V SVERR DGV FL + + + ++ SA +E+Y+ +
Sbjct: 23 NDDTKLNESVEVLVNGTTKLTLSLLLKEEELAPLFSGAAWAGTVVWDAAIYLARYFLHHYGAILRDKLRSIRVLELGAGIGVPGMAARIAGAESVILTEQEDLVDLMHRNLKGNANALGLDAANDKKEQAIVGRVLSWGKESIHNYLMTY---------------------QDEQIDFVLSCDCIFVPLYGDSWKALAITMQAICETNPQCCVFLSVERRKEDGVDSFLEYIASRTILISKLLEKSIASAENLLEIYQLN 261
BLAST of mRNA_Ecto-sp6_S_contig92.18405.1 vs. uniprot
Match: A0A024FZ75_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FZ75_9STRA) HSP 1 Score: 141 bits (355), Expect = 9.110e-36 Identity = 92/229 (40.17%), Postives = 118/229 (51.53%), Query Frame = 1
Query: 109 NDTVLCTDRVEVEFDGVTLDLAQSWENGEEMAPIFSGACWAGTVVWPAALDLCDYMSEH----LRQAMVGATVVELGCGIGVPGMVARLLGA-TVVLTEQDELLSLLDRNLDGNFAG---HP---RGEGGIRREALDWEREADTDGLLASLERSGIAPGEAEREPGAGVRRRSTRLDFVLCADCVFEPLYGDSWKALAKVMGRLSDAGT--TVLCSVERRGVDGVPEFL 756
+D+ ++ EV G T EE+AP+FSGA WAGTVVW AA+ L Y H LR A+ V+ELG GIGVPGM AR+ GA +V+LTEQ++L+ L+ RN+ N HP + E I L W +E+ L ++DFVL DC+FEPLYGDSWKALA M + + +V SVERR DGV FL
Sbjct: 14 HDSTNLNEKAEVLVFGTTKLTLSLLLKEEELAPLFSGAAWAGTVVWDAAIYLTRYFLHHYGTELRNALRSTRVLELGAGIGVPGMAARIAGADSVILTEQEDLVDLIHRNIKSNANALGLHPANDKKEQAIVGRVLSWGKESINTYLKTY---------------------HDEQIDFVLSCDCIFEPLYGDSWKALAITMQEICELNPECSVFLSVERRKEDGVDRFL 221
BLAST of mRNA_Ecto-sp6_S_contig92.18405.1 vs. uniprot
Match: A0A8J2SF35_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SF35_9STRA) HSP 1 Score: 140 bits (352), Expect = 2.480e-35 Identity = 99/253 (39.13%), Postives = 132/253 (52.17%), Query Frame = 1
Query: 121 LCTDRVEVEFDGVT---LDLAQSWENGEEMAPIFSGACWAGTVVWPAALDLCD--YMSEHLRQAMVGATVVELGCGIGVPGMVARLLGA-TVVLTEQDELLSLLDRNLDGNFAGHPRGEGGIRREALDWEREADTDGLLASLERSGIAPGEAEREPGAGVRRRSTRLDFVLCADCVFEPLYGDSWKALAKVMGRLSDAGTTVLCSVERR----GVDGVPEFLRACKAEGFSLQTVYRAAPSAPAPVELYEFSK 849
+C ++ V +GV LDL S +++ P+FSGA WAGTV+W AA L D ++ Q + G T +ELGCG+GVPGM LGA V LTEQ L+ LL RN+ NF+ GE +R + W R A + L G D ++C DCV+ PLYGDSWKAL + + L+ T VL S+ERR G DGV FL +A GF+ +T Y AA PVE++ F +
Sbjct: 35 ICQSQLTVRCEGVAPLNLDLKLS---PDDLEPVFSGAAWAGTVLWRAAAVLVDRAFLGADAVQ-IKGRTCIELGCGLGVPGMACARLGARNVALTEQQSLVDLLTRNVAANFSA---GED-VRAVSFPWSR-AGAEALKHDFCDGGC-------------------FDVIVCCDCVYMPLYGDSWKALLEAIDALAGPATDVLISLERRHVKDGDDGVDPFLEGMRANGFA-RTSYPAAM----PVEVFRFRR 254
BLAST of mRNA_Ecto-sp6_S_contig92.18405.1 vs. uniprot
Match: A0A7S2RY16_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RY16_9STRA) HSP 1 Score: 139 bits (351), Expect = 4.490e-35 Identity = 86/203 (42.36%), Postives = 113/203 (55.67%), Query Frame = 1
Query: 205 PIFSGACWAGTVVWPAALDLCDYMSEHLRQAMVGATVVELGCGIGVPGMVARLLGAT-VVLTEQDELLSLLDRNLDGNFAGHPRGEGGIRR---EALDWEREADTDGLLASLERSGIAPGEAEREPGAGVRRRSTRLDFVLCADCVFEPLYGDSWKALAKVMGRLS-DAGTTVLCSVERRGVDGVPEFLRACKAEGFSLQTVY 798
PIF G CWAGT+VW AA + +++ R+ + GA+V+ELGCG+G PGMVA LLGA V+LTEQ LL LL RN+ NF GEG + + L W D L+ S RR D +L DCVFEPLYG+SW L + + L+ D TT++ +ERR DGVP+FL A + F L+ V+
Sbjct: 2 PIFGGCCWAGTIVWAAAQAVMEHVLFPERERVQGASVIELGCGLGAPGMVAALLGARDVLLTEQSSLLPLLHRNIARNFPA--AGEGAVAAPGAQELAWGNSQVRD-LIDS--------------------RRGETFDLILVCDCVFEPLYGESWVLLCETLRHLAVDESTTLVVGLERRSEDGVPKFL-AELGKDFDLKLVW 180
BLAST of mRNA_Ecto-sp6_S_contig92.18405.1 vs. uniprot
Match: A0A1V9YH22_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YH22_9STRA) HSP 1 Score: 137 bits (344), Expect = 2.310e-34 Identity = 94/235 (40.00%), Postives = 121/235 (51.49%), Query Frame = 1
Query: 121 LCTDRVEVEFDGVTLDLAQSWENGEEMAPIFSGACWAGTVVWPAALDLCDYMSEHLRQAMVGATVVELGCGIGVPGMVARLLGAT-VVLTEQDELLSLLDRNLDGNFAGHPRGEGGIRREALDWEREADTDGLLASLERSGIAPGEAEREPGAGVRRRSTRLDFVLCADCVFEPLYGDSWKALAKVMGRLSDAGTT--VLCSVERRGVDGVPEFLRACKAEGFSLQTVYRAAPSA 816
+C +R+ + + +LD++ + EE+AP+F GA WAGT+VW AA L +YM L + + V+ELG G+GVPGMVA LLGA VVLTEQ EL+ LL N+ NFAG + L W REA A V T D +L DCV+EPLYG+SW+ALA M L A L SVERR DG+ FL ++ RA P A
Sbjct: 15 VCEERIVIHVEDKSLDISLLLDE-EELAPLFCGAAWAGTLVWEAAELLSNYMLNELDVSSL--RVLELGAGLGVPGMVAGLLGAQHVVLTEQPELVPLLRTNIRRNFAG----ANSVAAAELSWGREATR----------------------AFVATHGT-FDVLLSCDCVYEPLYGESWRALAHTMDELCAANPACRALVSVERRHGDGIDRFLAFLPTATRLTASLLRAVPKA 219
BLAST of mRNA_Ecto-sp6_S_contig92.18405.1 vs. uniprot
Match: A0A7S3JW58_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JW58_9STRA) HSP 1 Score: 138 bits (347), Expect = 4.170e-34 Identity = 92/226 (40.71%), Postives = 121/226 (53.54%), Query Frame = 1
Query: 193 EEMAPIFSGACWAGTVVWPAALDLCD--YMSEHLR--QAMVGATVVELGCGIGVPGMVARLLGATVV-LTEQDELLSLLDRNLDGNFAGHPRGEGGIRREALDWEREADTDGLLASLERSGIAPGEAEREPGAGVRRRSTRLDFVLCADCVFEPLYGDSWKALAKVMGRLSDAGTTVLCSVERR----GVDGVPEFLRACKAEGFSLQTVYRAAPSAPAPVELYEF 843
+ + PIFSG WAGTV+W AA+ L D ++S++ + + A+V+ELGCG+GVPGMVA +LGA +V LTEQ L+SLLDRN+ NF I LDW E A R+ + GE D VL DCV+ PLYGDSW+AL + ++ + VL +VERR G DGV FL A + F + S P PVE+Y F
Sbjct: 86 DAIEPIFSGGAWAGTVLWRAAIRLVDICFLSDNKKGIDELQSASVIELGCGLGVPGMVAAVLGARLVALTEQSNLVSLLDRNIKANFLSDSTNNPRIVARELDWCAEQ------AIALRNELLDGEP--------------FDIVLSCDCVYIPLYGDSWRALVDAIIAVAGPKSLVLVAVERRYVQGGTDGVDLFLNAMTSANFIPSLI-----SEP-PVEIYSF 285 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig92.18405.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig92.18405.1 >prot_Ecto-sp6_S_contig92.18405.1 ID=prot_Ecto-sp6_S_contig92.18405.1|Name=mRNA_Ecto-sp6_S_contig92.18405.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=322bp MANPTQPGIKVINKDFKRDDNDTVLCTDRVEVEFDGVTLDLAQSWENGEEback to top mRNA from alignment at Ecto-sp6_S_contig92:240906..244216- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig92.18405.1 ID=mRNA_Ecto-sp6_S_contig92.18405.1|Name=mRNA_Ecto-sp6_S_contig92.18405.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=3311bp|location=Sequence derived from alignment at Ecto-sp6_S_contig92:240906..244216- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig92:240906..244216- >mRNA_Ecto-sp6_S_contig92.18405.1 ID=mRNA_Ecto-sp6_S_contig92.18405.1|Name=mRNA_Ecto-sp6_S_contig92.18405.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=966bp|location=Sequence derived from alignment at Ecto-sp6_S_contig92:240906..244216- (Ectocarpus species6 EcLAC_371)back to top |