mRNA_Ecto-sp6_S_contig92.18404.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig92.18404.1
Unique NamemRNA_Ecto-sp6_S_contig92.18404.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
[Close]
BLAST of mRNA_Ecto-sp6_S_contig92.18404.1 vs. uniprot
Match: A0A6H5L0B7_9PHAE (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0B7_9PHAE)

HSP 1 Score: 329 bits (843), Expect = 9.900e-104
Identity = 208/215 (96.74%), Postives = 209/215 (97.21%), Query Frame = 3 
Query:  519 QNVTLLHRMVQQLGTARDTGELRGQCRCQLQVIGELREKIQAQMRLQQQQAEGASRQDAARLSAMNSKLTKDFNRVNAIALDLGTQAERRMREVDAQRXXXXXXXXXXXXXXXXXXXXXQPHGMVQLQQRRERVQMQEEAINTAIIQETEEELQQINKSLYKVNEIYRDLANIVEQQQEAVEEIETNTEGAHARAQEGLVQVQKANDYQPSCVVS 1163
            QNVTLLHRMVQQLGTARDTGELRGQCRCQLQVI ELREKIQ QMRLQQQQAEGASRQDAARLSAMNSKLTKDFNRVNAIALDLGTQAERRMREVDAQRXXXXXXXXXXXXXXXXXXXXX   GM Q+QQRRERVQMQEEAINTAIIQETEEELQQINKSLYKVNEIYRDLANIVEQQQEAVEEIETNTEGAHARAQEGLVQVQKANDYQPSCVVS
Sbjct:  132 QNVTLLHRMVQQLGTARDTGELRGQCRCQLQVIDELREKIQGQMRLQQQQAEGASRQDAARLSAMNSKLTKDFNRVNAIALDLGTQAERRMREVDAQRXXXXXXXXXXXXXXXXXXXXXXXXGMRQVQQRRERVQMQEEAINTAIIQETEEELQQINKSLYKVNEIYRDLANIVEQQQEAVEEIETNTEGAHARAQEGLVQVQKANDYQPSCVVS 346
[Close]
BLAST of mRNA_Ecto-sp6_S_contig92.18404.1 vs. uniprot
Match: D7FPU1_ECTSI (Soluble NSF Attachment Protein (SNAP) Receptor (SNARE) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPU1_ECTSI)

HSP 1 Score: 317 bits (811), Expect = 7.850e-101
Identity = 203/215 (94.42%), Postives = 203/215 (94.42%), Query Frame = 3 
Query:  519 QNVTLLHRMVQQLGTARDTGELRGQCRCQLQVIGELREKIQAQMRLQQQQAEGASRQDAARLSAMNSKLTKDFNRVNAIALDLGTQAERRMREVDAQRXXXXXXXXXXXXXXXXXXXXXQPHGMVQLQQRRERVQMQEEAINTAIIQETEEELQQINKSLYKVNEIYRDLANIVEQQQEAVEEIETNTEGAHARAQEGLVQVQKANDYQPSCVVS 1163
            QNVTLLHRMVQQLGTARDTGELRGQCRCQLQVIGELREKIQAQMRLQQQQAEGASRQDAARLSAMNSKLTKDFNRVNAIALDLGTQAERRMREVDAQRXXXXXXXXXXXXXXXXXXXXX            ERVQMQEEAINTAIIQETEEELQQINKSLYKVNEIYRDLANIVEQQQEAVEEIETNTEGAHARAQEGLVQVQKANDYQPSCVVS
Sbjct:    5 QNVTLLHRMVQQLGTARDTGELRGQCRCQLQVIGELREKIQAQMRLQQQQAEGASRQDAARLSAMNSKLTKDFNRVNAIALDLGTQAERRMREVDAQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERVQMQEEAINTAIIQETEEELQQINKSLYKVNEIYRDLANIVEQQQEAVEEIETNTEGAHARAQEGLVQVQKANDYQPSCVVS 219
[Close]
BLAST of mRNA_Ecto-sp6_S_contig92.18404.1 vs. uniprot
Match: A0A835ZJ40_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJ40_9STRA)

HSP 1 Score: 110 bits (276), Expect = 2.030e-24
Identity = 75/160 (46.88%), Postives = 98/160 (61.25%), Query Frame = 3 
Query:  693 AARLSAMNSKLTKDFNRVNAIALDLGTQAERRMREVDAQRXXXXXXXXXXXXXXXXXXXXXQPHGMVQL---QQRRERVQMQEEAINTAIIQETEEELQQINKSLYKVNEIYRDLANIVEQQQEAVEEIETNTEGAHARAQEGLVQVQKANDYQPSCVVS 1163
            AARLS    +  +D+NRV+ +A DL  +A RR  ++D +R                        G   L   QQ++ + QM EEAIN AII+ETE EL  INKSL+ V+EI++DLA++V QQQE VE IE  TE AH RAQ+GL QVQ+A+ YQPSC +S
Sbjct:   20 AARLSVCCVR-EQDYNRVSRLAKDLEVEAARRAEDLDRRRRGTAAAEAAVAARIFGVEDNADSAGGGALRGPQQQQLQAQMAEEAINQAIIEETEAELGAINKSLHAVHEIFKDLASMVSQQQEQVEHIEEQTEAAHQRAQQGLAQVQQASHYQPSCSIS 178
[Close]
BLAST of mRNA_Ecto-sp6_S_contig92.18404.1 vs. uniprot
Match: A0A7S3Q8K2_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q8K2_9STRA)

HSP 1 Score: 102 bits (255), Expect = 1.230e-20
Identity = 69/217 (31.80%), Postives = 123/217 (56.68%), Query Frame = 3 
Query:  516 QQNVTLLHRMVQQLGTARDTGELRGQCRCQLQVIGELREKIQAQMRLQQQQAEGASRQDAARLSAMNSKLTKDFNRVNAIALDLGTQAERRMREVDAQRXXXXXXXXXXXXXXXXXXXXXQPHGMVQLQQRRERVQMQEEAINTAIIQETEEELQQINKSLYKVNEIYRDLANIVEQQQEAVEEIETNTEGAHARAQEGLVQVQKAN-DYQPSCVVS 1163
            QQNV +L  ++Q +GT  D   L+ Q + Q  VI E+  KI++Q+  Q++  E  +R DA++  A + KLT+D+  V     ++  + ++R   ++A+R                          +     + ++Q+Q+E +   I++E EEE+++INK +++VNEIY+DLANIV  QQ+ V+E+E + E A+  A+ GL Q++KA+     +C++S
Sbjct:   67 QQNVGILSNIIQGIGTKSDGPLLKQQYKVQTDVIREIGAKIESQLAQQEKHMETMTRTDASKGRATHVKLTRDYRWVETKFKNIQLECKQRRNAIEAERLAAVEDTNRKQFEKG-----------IDSNNAKHQMQLQDERVTEEIMREREEEVRKINKGMHQVNEIYKDLANIVSYQQDQVDEVEEHMESANKNAESGLKQIEKASAKSDQACIIS 272
[Close]
BLAST of mRNA_Ecto-sp6_S_contig92.18404.1 vs. uniprot
Match: A0A4D9D2P6_9STRA (t-SNARE coiled-coil homology domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D2P6_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 1.090e-17
Identity = 76/243 (31.28%), Postives = 124/243 (51.03%), Query Frame = 3 
Query:  447 TNASSSNFLPPLLLPQRWLITHGQQNVTLLHRMVQQLGTARDTGELRGQCRCQLQVIGELREKIQAQMRLQQQQAEGA---SRQDAARLSAMNSKLTKDFNRVNAIALDLGTQAERRMREVDAQRXXXXXXXXXXXXXXXXXXXXXQPHGMVQLQQRRERVQM-QEEAINTAIIQETEEELQQINKSLYKVNEIYRDLANIVEQQQEAVEEIETNTEGAHARAQEGLVQVQKANDYQPSCVVS 1163
            TN S+ +     + P R  +   QQ V L  ++ + LG  RD  ELR Q + Q  V+ E+  +++  + +Q +  EG    + +D ARL     K++KD  R+     +L   A  R+RE+                         +   +++ Q  ++ +Q+ Q E ++  ++QE EEE+  IN+S+ KVNEI+RDL  +V +QQE ++ IE N + +HA A+ GL QV KA  YQ  C +S
Sbjct:   55 TNGSTDHTPGSSVPPLRHALLQYQQQVQLFEKLSRVLGGPRDDSELRSQLQAQGSVVKEVGSRVEQLVHVQLRTVEGVRSKAEKDKARLEVQ--KMSKDAQRLKLRFENLERAAAVRLRELKLAGRRAEDLLRGSGIGNGDEPGAGRGGQLIERQHGQQEMQLLQAEDLDERLLQEREEEIVAINQSVVKVNEIFRDLGELVSRQQEDIDAIEQNVQHSHAAAKSGLEQVAKAAKYQAGCSLS 295
[Close]
BLAST of mRNA_Ecto-sp6_S_contig92.18404.1 vs. uniprot
Match: A0A7R9W8L2_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W8L2_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 1.780e-17
Identity = 89/224 (39.73%), Postives = 135/224 (60.27%), Query Frame = 3 
Query:  504 ITHGQQNVTLLHRMVQQLGTARDTGELRGQCRCQLQVIGELREKIQAQMRLQQQQAEGASRQDAARLSAMNSKLTKDFNRVNAIALDLGTQAERRMR-EVDAQRXXXXXXXXXXXXXXXXXXXXXQPHGMVQLQQRRERVQMQEEAINTAIIQETEEELQQINKSLYKVNEIYRDLANIVEQQQEAVEEIETNTEGAHARAQEGLVQVQKANDYQPS---CVVS 1163
            I   ++N+ +L ++V Q GT  D   L+ Q   QL V+ +L E+I+ Q+R  +++    SR +  +  A ++KLT+D+ RV         QA + ++ EV  +R     XXXXXXXXXXXXXXX +  G   L     R Q+QE+ +   I++E EEE++ INK ++ VNEIY+DLA+IV  QQE ++++E N E A    +EGL QV+KAN+   S   C++S
Sbjct:  115 IVQFRKNIGILEKIVAQFGTKGDGPMLQKQYATQLDVVRQLGERIEGQLRRAEEEMRTMSRTEREKSRATHAKLTRDYRRV--------AQAFKNVQLEVRRKRGLAEAXXXXXXXXXXXXXXXGEGAGDELL-----RAQLQEDRLAEEIMREREEEIRNINKGMHTVNEIYKDLAHIVGNQQEQIDQVEANMEDAKVTTEEGLKQVEKANEKADSPYQCLIS 325
[Close]
BLAST of mRNA_Ecto-sp6_S_contig92.18404.1 vs. uniprot
Match: B8LCN4_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LCN4_THAPS)

HSP 1 Score: 95.9 bits (237), Expect = 2.200e-17
Identity = 81/224 (36.16%), Postives = 126/224 (56.25%), Query Frame = 3 
Query:  516 QQNVTLLHRMVQQLGTARDTGELRGQCRCQLQVIGELREKIQAQMRLQQQQAEGASRQDAARLSAMNSKLTKDFNRVNA----IALDLGTQ---AERRMREVDAQRXXXXXXXXXXXXXXXXXXXXXQPHGMVQLQQRRERVQMQEEAINTAIIQETEEELQQINKSLYKVNEIYRDLANIVEQQQEAVEEIETNTEGAHARAQEGLVQVQKANDYQPS-CVVS 1163
            Q+NV LL +M + +GT  D   L+ Q   QL VI +L  +I+ Q++ Q+ +     R +AA+    + KL++D+  V      + LD+  +   AE R RE+  + XXXXXXX                 G    +  R ++Q+QE+ IN  I++E E E++ I+K +++VNEIY+DLA++V+ QQE V++IET  E        GL  ++KAN+ Q S CVVS
Sbjct:  202 QRNVALLEKMARSVGTKNDNSVLQTQYNLQLDVIRQLGTRIEKQLQSQESRLSTLPRTEAAQSRTTHVKLSRDYRLVEQQFKNVQLDVKKKRSLAEARQREIRIEXXXXXXXXVNGGG-----------EGSAGDEVMRRQMQIQEDRINEEIMREREAEIRNIHKGMHQVNEIYKDLAHLVDNQQEGVDQIETQMENTKENTASGLKHIEKANESQQSQCVVS 414
[Close]
BLAST of mRNA_Ecto-sp6_S_contig92.18404.1 vs. uniprot
Match: A0A7S4JYM9_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JYM9_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 3.040e-17
Identity = 87/224 (38.84%), Postives = 136/224 (60.71%), Query Frame = 3 
Query:  504 ITHGQQNVTLLHRMVQQLGTARDTGELRGQCRCQLQVIGELREKIQAQMRLQQQQAEGASRQDAARLSAMNSKLTKDFNRVNAIALDLGTQAERRMR-EVDAQRXXXXXXXXXXXXXXXXXXXXXQPHGMVQLQQRRERVQMQEEAINTAIIQETEEELQQINKSLYKVNEIYRDLANIVEQQQEAVEEIETNTEGAHARAQEGLVQVQKANDYQPS---CVVS 1163
            I   ++N+ +L ++V Q GT  D   L+ Q   QL V+ +L E+I+ Q+R  +++    SR +  +  + ++KLT+D+ RV         QA + ++ EV  +R     XXXXXXXXXXXXXXX +  G   LQ      Q+QE+ +   I++E EEE++ INK ++ VNEIY+DLA++V +QQE ++++ET+ E A    + GL QV+KAN+   S   CV+S
Sbjct:   58 IVQFRRNIGILEKIVSQFGTKADGPMLQKQYATQLDVVRQLGERIEGQLRRAEEEMRTMSRTEREKSRSTHAKLTRDYRRVE--------QAFKNVQLEVRRKRGLAEAXXXXXXXXXXXXXXXGEGAGDELLQ-----AQLQEDRLAEEIMREREEEIRNINKGMHTVNEIYKDLAHVVGRQQEQIDQVETHMEDAKDNTEAGLKQVEKANEKADSPYQCVIS 268
[Close]
BLAST of mRNA_Ecto-sp6_S_contig92.18404.1 vs. uniprot
Match: F0Y8W0_AURAN (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y8W0_AURAN)

HSP 1 Score: 88.2 bits (217), Expect = 1.920e-15
Identity = 48/82 (58.54%), Postives = 66/82 (80.49%), Query Frame = 3 
Query:  918 VQMQEEAINTAIIQETEEELQQINKSLYKVNEIYRDLANIVEQQQEAVEEIETNTEGAHARAQEGLVQVQKANDYQPSCVVS 1163
            V MQEEAIN AI++E EEE+++IN++++KVNEI+RDLA +V++QQ  V++I    E +HA A++GL QVQKA   QPSCVVS
Sbjct:  218 VAMQEEAINDAILREREEEIREINQNVHKVNEIFRDLATLVDKQQGEVDQIGELVEKSHAHAEKGLDQVQKAAKLQPSCVVS 299
[Close]
BLAST of mRNA_Ecto-sp6_S_contig92.18404.1 vs. uniprot
Match: A0A7S3JXJ1_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JXJ1_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 3.240e-15
Identity = 91/292 (31.16%), Postives = 132/292 (45.21%), Query Frame = 3 
Query:  384 YQPVMHTIMQVCIRDNLLGTITNASSSNFLPPLLLPQRWLITHGQQNVTLLHRMVQQLGTARDTG-ELRGQCRCQLQVIGELREKIQAQMRLQQQQAEGASRQDAARLSAMNSKLTKDFNRV------------NAIALDL---------------GTQAERRMREVDAQRXXXXXXXXXXXXXXXXXXXXXQPHGMVQLQQRRERVQ----MQEEAINTAIIQETEEELQQINKSLYKVNEIYRDLANIVEQQQEAVEEIETNTEGAHARAQEGLVQVQKANDYQPSCVVS 1163
            Y   + T  Q   R     TI N  +   +  L     WL    QQN+ +L R+   +GT  D G E   Q   Q  V+ EL   ++  +    ++ E   R +  R  A  +KL KDF RV            NA  L L                T + ++M   +                           G + +    +RVQ    MQEEAIN AI++E EEE+++IN+S++KVNEI+RDLA IV++QQ  V++I    E +H  A++GL QVQKA   QP+C++S
Sbjct:   24 YNQNVRTQQQTVRRAAPHSTIENREAPTVVETLNQISDWL-RQFQQNLLILDRLGDTVGTDPDPGDEFLRQVAAQQDVVSELASTVRRALNDLPRRIEALPRIEQGRPKAAMAKLRKDFERVGSDLRRVLDKIKNARRLALTNARAEKGGSLSGQASTASSQQMNGSNLYSRSANAAVGAPHRVGRAQFGPSDAPGDLDVVIGNQRVQLQVAMQEEAINDAILREREEEIREINQSVHKVNEIFRDLALIVDKQQTEVDQIGDLVEKSHNHAEKGLDQVQKAAKLQPTCLIS 314
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig92.18404.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L0B7_9PHAE9.900e-10496.74t-SNARE coiled-coil homology domain-containing pro... [more]
D7FPU1_ECTSI7.850e-10194.42Soluble NSF Attachment Protein (SNAP) Receptor (SN... [more]
A0A835ZJ40_9STRA2.030e-2446.88t-SNARE coiled-coil homology domain-containing pro... [more]
A0A7S3Q8K2_9STRA1.230e-2031.80Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A4D9D2P6_9STRA1.090e-1731.28t-SNARE coiled-coil homology domain-containing pro... [more]
A0A7R9W8L2_9STRA1.780e-1739.73Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
B8LCN4_THAPS2.200e-1736.16Predicted protein n=1 Tax=Thalassiosira pseudonana... [more]
A0A7S4JYM9_9STRA3.040e-1738.84Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
F0Y8W0_AURAN1.920e-1558.54t-SNARE coiled-coil homology domain-containing pro... [more]
A0A7S3JXJ1_9STRA3.240e-1531.16Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig92contigEcto-sp6_S_contig92:235541..240429 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score321.2
Seed ortholog evalue4.9e-85
Seed eggNOG ortholog2880.D7FPU1
Preferred nameSTX7
Model size2058
KEGG koko:K03321,ko:K08455,ko:K08488,ko:K13216,ko:K13813
KEGG TC2.A.53.3
KEGG Pathwayko04130,ko04145,map04130,map04145
Hectar predicted targeting categoryother localisation
GOsGO:0000045,GO:0000149,GO:0000323,GO:0000407,GO:0001505,GO:0001772,GO:0001910,GO:0001912,GO:0001914,GO:0001916,GO:0002165,GO:0002682,GO:0002684,GO:0002697,GO:0002699,GO:0002703,GO:0002705,GO:0002706,GO:0002708,GO:0002709,GO:0002711,GO:0002819,GO:0002821,GO:0002822,GO:0002824,GO:0003674,GO:0005484,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005765,GO:0005766,GO:0005768,GO:0005769,GO:0005770,GO:0005773,GO:0005774,GO:0005886,GO:0006810,GO:0006836,GO:0006869,GO:0006886,GO:0006887,GO:0006904,GO:0006906,GO:0006914,GO:0006996,GO:0007033,GO:0007034,GO:0007041,GO:0007154,GO:0007163,GO:0007267,GO:0007268,GO:0007269,GO:0007275,GO:0008021,GO:0008104,GO:0008150,GO:0008152,GO:0008200,GO:0008285,GO:0008333,GO:0009056,GO:0009791,GO:0009987,GO:0010008,GO:0010876,GO:0012505,GO:0012506,GO:0015031,GO:0015833,GO:0015850,GO:0015918,GO:0016020,GO:0016021,GO:0016043,GO:0016050,GO:0016079,GO:0016081,GO:0016192,GO:0016236,GO:0016247,GO:0016248,GO:0017081,GO:0017156,GO:0019869,GO:0019905,GO:0022406,GO:0022607,GO:0023052,GO:0023061,GO:0030100,GO:0030133,GO:0030139,GO:0030141,GO:0030285,GO:0030301,GO:0030424,GO:0030658,GO:0030659,GO:0030672,GO:0031090,GO:0031201,GO:0031224,GO:0031300,GO:0031301,GO:0031341,GO:0031343,GO:0031410,GO:0031647,GO:0031902,GO:0031982,GO:0032501,GO:0032502,GO:0032879,GO:0032880,GO:0032940,GO:0032991,GO:0033036,GO:0033267,GO:0033344,GO:0034058,GO:0034613,GO:0035073,GO:0035088,GO:0035210,GO:0035264,GO:0040007,GO:0042127,GO:0042582,GO:0042886,GO:0042995,GO:0043005,GO:0043195,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043679,GO:0044085,GO:0044237,GO:0044248,GO:0044306,GO:0044422,GO:0044424,GO:0044425,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0044877,GO:0045055,GO:0045121,GO:0045184,GO:0045202,GO:0045335,GO:0045807,GO:0046903,GO:0046907,GO:0048227,GO:0048278,GO:0048284,GO:0048471,GO:0048489,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048589,GO:0048856,GO:0050776,GO:0050778,GO:0050789,GO:0050794,GO:0050821,GO:0051049,GO:0051050,GO:0051128,GO:0051130,GO:0051179,GO:0051234,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0055037,GO:0060341,GO:0060627,GO:0061024,GO:0061025,GO:0061245,GO:0061919,GO:0065007,GO:0065008,GO:0065009,GO:0070382,GO:0070727,GO:0070820,GO:0070925,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0090174,GO:0097458,GO:0097479,GO:0097480,GO:0097708,GO:0098563,GO:0098588,GO:0098589,GO:0098772,GO:0098793,GO:0098794,GO:0098796,GO:0098805,GO:0098837,GO:0098845,GO:0098852,GO:0098857,GO:0098916,GO:0099003,GO:0099106,GO:0099501,GO:0099503,GO:0099504,GO:0099536,GO:0099537,GO:0099643,GO:0120025,GO:0120038,GO:0140029,GO:0140056,GO:0150034,GO:1902683,GO:1902685,GO:1903076,GO:1903827,GO:1904375,GO:1905037,GO:1905475
Exons6
EggNOG free text desc.Glycosyltransferase like family
EggNOG OGsCOG5325@1,KOG0811@2759
Ec32 ortholog descriptionSoluble NSF Attachment Protein (SNAP) Receptor (SNARE)
Ec32 orthologEc-18_001700.1
Cds size876
COG Functional cat.HMU
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01009,ko02000,ko03041,ko04030,ko04131,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig92.18404.1prot_Ecto-sp6_S_contig92.18404.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig92 235831..239537 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350560.6270921-UTR-Ecto-sp6_S_contig92:235540..2358301682350560.6270921-UTR-Ecto-sp6_S_contig92:235540..235830Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig92 235541..235830 +
1682350560.7148066-UTR-Ecto-sp6_S_contig92:239537..2404291682350560.7148066-UTR-Ecto-sp6_S_contig92:239537..240429Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig92 239538..240429 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350560.6505725-CDS-Ecto-sp6_S_contig92:235830..2361871682350560.6505725-CDS-Ecto-sp6_S_contig92:235830..236187Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig92 235831..236187 +
1682350560.662446-CDS-Ecto-sp6_S_contig92:236893..2370221682350560.662446-CDS-Ecto-sp6_S_contig92:236893..237022Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig92 236894..237022 +
1682350560.6723108-CDS-Ecto-sp6_S_contig92:237861..2379701682350560.6723108-CDS-Ecto-sp6_S_contig92:237861..237970Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig92 237862..237970 +
1682350560.6837633-CDS-Ecto-sp6_S_contig92:238506..2386251682350560.6837633-CDS-Ecto-sp6_S_contig92:238506..238625Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig92 238507..238625 +
1682350560.69166-CDS-Ecto-sp6_S_contig92:239079..2391961682350560.69166-CDS-Ecto-sp6_S_contig92:239079..239196Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig92 239080..239196 +
1682350560.7045705-CDS-Ecto-sp6_S_contig92:239492..2395371682350560.7045705-CDS-Ecto-sp6_S_contig92:239492..239537Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig92 239493..239537 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig92.18404.1

>prot_Ecto-sp6_S_contig92.18404.1 ID=prot_Ecto-sp6_S_contig92.18404.1|Name=mRNA_Ecto-sp6_S_contig92.18404.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=292bp
MHLIYPAAGPKRQIETTRLFSRGVDTVTHKTYQPVMHTIMQVCIRDNLLG
TITNASSSNFLPPLLLPQRWLITHGQQNVTLLHRMVQQLGTARDTGELRG
QCRCQLQVIGELREKIQAQMRLQQQQAEGASRQDAARLSAMNSKLTKDFN
RVNAIALDLGTQAERRMREVDAQRQSQVEEDEERARVAFAGAGGGQPHGM
VQLQQRRERVQMQEEAINTAIIQETEEELQQINKSLYKVNEIYRDLANIV
EQQQEAVEEIETNTEGAHARAQEGLVQVQKANDYQPSCVVS*
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mRNA from alignment at Ecto-sp6_S_contig92:235541..240429+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig92.18404.1 ID=mRNA_Ecto-sp6_S_contig92.18404.1|Name=mRNA_Ecto-sp6_S_contig92.18404.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=4889bp|location=Sequence derived from alignment at Ecto-sp6_S_contig92:235541..240429+ (Ectocarpus species6 EcLAC_371)
AATCCGGCGAGCCAAGGCGTTCCGACCACGAAGGTCTACCAAGCACGTGG
CATGCAGAAGAGTCGGCAGTCTTAGGCGAGAGAGGATTAGTCGCGTCTTG
CGACTGATGCTGCTCCTCTCCGGTCGCCGGTCGCCGGTCGCCACACGAAG
CCACTTACTGCTGTCTACAAATCGGGCCAGGTCCCCTTCCTAGCTACGCC
CGTTCACGACATTTTCATGGCCATTGTTGGCCGATGTCGCGAAACGCCAG
CTGTAGACTAGTCCACGAGGCGTTTCGCTAGCCGTATCGTATGCATCTCA
TCTATCCTGCTGCTGGCCCGAAAAGGCAAATAGAGACGACGAGACTATTC
TCAAGAGGCGTTGATACCGTTACACACAAGACATACCAGCCGGTTATGCA
TACGATCATGCAGGTATGTATTCGAGATAACCTTCTGGGCACGATCACAA
ATGCATCGTCTTCCAATTTTTTGCCGCCTCTGTTGTTGCCTCAACGCTGG
TTAATCACACATGGACAGCAAAATGTCACATTACTGCACCGCATGGTGCA
GCAGCTGGGCACGGCCCGAGATACCGGCGAGCTCCGCGGGCAGTGCCGGT
GCCAGCTGCAGGTTATCGGCGAACTTCGAGAAAAGATCCAGGCCCAGGTA
GGGCGGCAGAAGAAGTAGATCCGCGTGTGTTTGCGCAGCAAGGTAGTGGT
CGTGCGGTGTACTTTGGATGCTGTTGCCGCTACTCTCTCGCTATGATCCA
TCTATCCCTTTGTATATCAATGTCGTGCCTACATGTCTCTCTCTTGGTTC
CACGCGAGCTTGTGGACAGGGCTGTAGAGTGACCCTTGACCTTCGTACGA
AAGCCTGAGCTCTACTGTATAGGCCTTCCGCTGTACCGCCCCCCCCCCCC
TTCTGTAGGTTGCATTGAGAAGTACGACGAGGAAGAGACGTAGGTTGCAT
TGAGAAGTACGACGAGGAAGAGACGTCATACGAGGGAATAGACGACCCGA
CATGGGGCAAGACAATAGGAGGTCGTTTACCAGGATGCCAAGAACAGGGA
GAGAACTCACTTATTTTTCCATCTGAGGAGGTAAGTAATGGCCGCCGTAG
GCCGCTGGGAGGGAGGTACGATGAGCGAAACGTGCCGATCCTTAAAACCA
AATGACGGGAGACGTCCCCTTTTAGCATGGGGACCCTGCTTTGCTCAAAA
CGGACGCGTGCTCAAGTGGTCGATGGCCTGAGTTTTAGCCCCACAGACAA
GTACGCTCGGCAACATCCCCCTCCTCGTCGCTCTGCCACACTTATCACCG
TCTGTTGCTTGTTTCTTGCTCGCCGCGGCCGACGGCTGTGGAAACCTGTT
CAGATGCGGCTGCAGCAGCAGCAGGCCGAGGGGGCTTCTAGGCAGGACGC
TGCACGCCTCAGTGCGATGAACTCCAAGCTGACCAAGGATTTCAACCGAG
TCAATGCCATCGCGCTGGACCTGGGGACGCAGGTGCGTGTACAGTTGTAA
TGAGTATGTATTAACAAATAGGTGTGTCTTGCATTAACATCGACCGGAAG
ATTTCAAAGGTTTTCTTGGCATCGGCAGCGGTAGCCGGCAATGAACGTGC
GTCAGTCTTGTGAGGGTTCTGTGTGATGATGTACGTGTTGCTGCGAGTTT
CGTCTTGTTGTGGTTTTTTGGGTATAAAAACCCTTCCGGGAAGGCATCCC
TCAAGAGAGTGTTATCTTGAGGGTAAGTATGAAGTGAAGCCTACCGGGTA
CCGGACTTGCTGGGAGTCCTAGTATTCGGTGTTGCGTGTGCGTTCCCTGA
GGTTGGAGGGCAGACGGAAAGGAAAGGAAGAGTGGGCTTGATGGTGCCTG
TCTGCCTGCCTCCCTGCCTGCACCTGTATCGTATCGCGGGGCTTGTGCAT
GTGTAGAGAGGGGCGCGTTACGATGCTTGGTTGTTCATTTTTCAGTTTGG
CTTTTAATCGTGTCACCAGTGACTGAACGAACATGCGGCGCAACCTGTGA
ACGGGGTTGGTCGATAAGAAAACTCTTGCGGTGGGCGAACTGCTCACACA
ACGCGCGATTGCGACTCGAACTGCGTCGGAAACGCGAAAATACGCAGAGA
ACAGCGGAACGAGGTTTTACCTGTACGCCTCCGCAGCTGCACAACACAGA
GAGAGCCCCATGAAAGTTCCTCGCGCTTCGTGTTCCCCCGCGTTGCTTGC
TTTTGGTTGTCTTGATAAGATACATCTTCGAAGCTGCCTGTTCTGCCGGA
TTTCCTGTACGCGGTCTTGTCGCTCTAACTCGGTGCGCTCATCGTTTGAC
ACTTCTCGGGCCTTGTCTCAGGCGGAACGTAGAATGCGAGAGGTGGACGC
TCAGCGGCAGTCGCAGGTGGAGGAGGACGAGGAGCGAGCACGAGTGGCGT
TCGCCGGGGCCGGAGGCGGCCAACCGCACGGTGAGTTCCTGCGTGCCGTT
GATGATGGCGTCTGGTCCATTTCTTGCCCCGCGCAACTCCCTCTCGGTCA
AGCCTGCCGAAGACCACCCCGATCTTTAGTTCGTTTTTTTGCCCGCCTGC
AATCCCGCAGCGTGCAGCGCAACAACGATATACCTAAACGGCTGCTGTGC
TTCGTTAAGACTGTTCCCAGGGCCGTCTCGTTTTGTGGGCAACAAAATGG
TAGCGTGTGCGGTCTCTGTGGTTCAGGCCGAGTGTCACCACGATGACAGC
AGGTCGACAAAATCCCCGTAGGAAATTGCGCAGCAGCACTTTAACGCTTG
TGCTCGACCTATGAAATCTTGTTCGTCTGGCTCAGCTCTTTCTTTGTCTC
CCGTCCTCATCTCGTTGCATCTCCTGTCCGTTGTACAACCACCGCCCGTT
CTTAAAATATTGCGTGCACCCGGCATGGAGTTGCTTGATTTGCTGGGTTT
TGTCTTGTGTCTCTTGCGTATTGAGCCTTCTGGTTCCCGTTCGTTCTGGC
TCGTTTTGCGCGACAGGCATGGTGCAACTTCAGCAACGGCGGGAGCGAGT
GCAGATGCAGGAGGAGGCAATAAACACCGCCATCATCCAGGAGACTGAGG
AGGAGCTGCAGCAGATCAACAAGAGCCTGTACAAGGTGTGACGGGGTCGA
CGGTGGGGATAGTGTAGTGGGGCAAACGGGGACGTGAACGCCGACCTTGC
TTTCGTTTTTTTATGTCTCACGGCCATCAAACTCTCCTCTAGATGTCCAG
CACGATGTTGTTGGTGTTTTACTACACCAAGTGTTGGGGTACTGATGTGT
TCTTCAGGATGAGCGTCCTGGCGGCTGAAACGCAGCTTTGTGCATCTCTC
AACTCAGCTGAGGTCGACCATAACTCAAATGAGTCCCCAGCGAGATTTTT
TTTAACGACTTCATGCATGGAGAGCGGGCGGTACTCCGCGGCGTTGTCAA
GAGAGTGCTGTGGCAGTCAGATATCCGCTGTTGGAAGGACTGTCTTTCCG
CTTACCATGGTGTTTTCGGTCGAGAACCCAAAGCAACAAGCTGGAGAACG
AACATGTTGCCTTGTGTTGGTCCGTCGCCGTGCCGTCAGGTGAACGAGAT
CTACCGAGACTTGGCGAATATCGTGGAGCAGCAGCAGGAAGCGGTGGAGG
AAATCGAGACCAACACGGAAGGGGCGCACGCGAGAGCCCAAGAGGGTTTA
GTTCAGGTATGCCATGTATCCACGTTTGAGTCGAAGCTATGTACTCCAGA
TGGGAGCTAGCCGTGGTATTTGTCCGTTGTTCTGAAAGCAGTCTTGTTGA
TAGGGCGGGGTGGCTGTTGCACGACACCCACTGGCTCTCAAGAGAAAGGC
TCTATTGTGTTGCGGTGGGCAAGGTCACCCGCGCTTGATCTCTCTGTACC
GACGGTCATTCATCTCTGGGTGCATCCAAGCTCTTGTGATTGGCGATTGA
TCCTTGCTTCATATCTTGCTATGGCCGCGTCTCTTGTTCGTTCAACGCAC
AGGTTCAGAAGGCGAACGACTACCAGCCGTCGTGTGTAGTGTCGTGACCT
CCCCCAACACCTTGCACTCTTCTCCGAAGGCTGGTTTGAGTGCGCGCCCC
TTCCAGGACATGGACGACGTCATGACTTCACCACAAAGCTGGCGTGTCTC
GCTTGTTTGGGTGTAGGGCGTTGGCGAAAAGTGCCATACCACTTCGTAGT
AAGCAAGGATTTTTTTTGCTGTAACACTAAGGCCGGGAGGAACGCGCACG
AAGAATGCGGTACGGGCTGTGTGCATGCTTGGTGTCCACTCTGGATACTT
GGTACGTGACGCCCTGCATGTGGCGCGACTGGATGTATAGAGCAGCAGTG
TCGAAAGCGCTACCGTTGTGCAGCGGTGAGTAGCGATGGGAGCCGGTGGC
GCGTCTTTGTTGCTGCCCCGGCACGCTTTGCTTTGCTGCCTACTGCGGCG
GCGGCGGCGGTTGCTGCTGCTGTTGTACGGCAGTAGGATACCAGCCAGGA
CCGGGACACCCGTAAAGTTGTCGTTGTGGTGTGTGATGTGGTGGTGTGTG
TGTTCCGGTAGAACTCGAATTCTCGCTTCCCCGCTAAGAAAATGCGCTTC
CCTGGGAAGCCGATGAAGTCTTTGGTGGAAGTACCATGAGTGCCCTGCAT
GCGTTCAGTGTTCGTCGATAGTCACGACGCCCTCCCGAAAGTCATCGTGC
TTGCATAGCTATTGCGCTTAACGGCGTACCATATCCACCTTATTTTTGTC
TGTATACTGGAGGGCGTGATGATACCACTGTGTCCAAAATGGGGGGATGC
AGTGTGGCTTTTGCAGGGGCCCCTTTTCGGGTGTTGTGTTGTATAAGGAG
GCGTTTTTGTCTGACTCTTGGTTTGTTCCATCCTGAAGTTTTGAAGTGCT
TCGCCTGTGTCCACCCCCGCCAACCCAAGCCCCTGGTTG
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig92:235541..240429+

>mRNA_Ecto-sp6_S_contig92.18404.1 ID=mRNA_Ecto-sp6_S_contig92.18404.1|Name=mRNA_Ecto-sp6_S_contig92.18404.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=876bp|location=Sequence derived from alignment at Ecto-sp6_S_contig92:235541..240429+ (Ectocarpus species6 EcLAC_371)
ATGCATCTCATCTATCCTGCTGCTGGCCCGAAAAGGCAAATAGAGACGAC
GAGACTATTCTCAAGAGGCGTTGATACCGTTACACACAAGACATACCAGC
CGGTTATGCATACGATCATGCAGGTATGTATTCGAGATAACCTTCTGGGC
ACGATCACAAATGCATCGTCTTCCAATTTTTTGCCGCCTCTGTTGTTGCC
TCAACGCTGGTTAATCACACATGGACAGCAAAATGTCACATTACTGCACC
GCATGGTGCAGCAGCTGGGCACGGCCCGAGATACCGGCGAGCTCCGCGGG
CAGTGCCGGTGCCAGCTGCAGGTTATCGGCGAACTTCGAGAAAAGATCCA
GGCCCAGATGCGGCTGCAGCAGCAGCAGGCCGAGGGGGCTTCTAGGCAGG
ACGCTGCACGCCTCAGTGCGATGAACTCCAAGCTGACCAAGGATTTCAAC
CGAGTCAATGCCATCGCGCTGGACCTGGGGACGCAGGCGGAACGTAGAAT
GCGAGAGGTGGACGCTCAGCGGCAGTCGCAGGTGGAGGAGGACGAGGAGC
GAGCACGAGTGGCGTTCGCCGGGGCCGGAGGCGGCCAACCGCACGGCATG
GTGCAACTTCAGCAACGGCGGGAGCGAGTGCAGATGCAGGAGGAGGCAAT
AAACACCGCCATCATCCAGGAGACTGAGGAGGAGCTGCAGCAGATCAACA
AGAGCCTGTACAAGGTGAACGAGATCTACCGAGACTTGGCGAATATCGTG
GAGCAGCAGCAGGAAGCGGTGGAGGAAATCGAGACCAACACGGAAGGGGC
GCACGCGAGAGCCCAAGAGGGTTTAGTTCAGGTTCAGAAGGCGAACGACT
ACCAGCCGTCGTGTGTAGTGTCGTGA
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