mRNA_Ecto-sp6_S_contig92.18392.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig92.18392.1 vs. uniprot
Match: D7FPV3_ECTSI (Glutathione S-transferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPV3_ECTSI) HSP 1 Score: 434 bits (1117), Expect = 9.700e-148 Identity = 233/244 (95.49%), Postives = 233/244 (95.49%), Query Frame = 2
Query: 107 MSSITLTYFDIPGPAEAIRLAFYVGGIPFKDRRVSRQEFAKIKRGPFALSCRIPDLPFAQLPILTVDDEVFPQSAAILRYAGKIGGLYPSDPIAAAKVDAVIDCMFDIQAAIRPSIYETNAQRKLSMRKELSEVTLPLWLQYLERWLERAGTTFFVGEEITICDLVIYTRMKWLRRGVLVGIPDTILRNFRRVRAHSEAVASHPKVDDYYKNGPGKVTGDGSPPIXXXXXXXXXXXITLPSNGD 838
MSSITLTYFDIPGPAEAIRLAFYVGGIPFKDRRVSRQEFAKIKR DLPFAQLPILTVDDEVFPQSAAILRYAGKIGGLYPSDPIAAAKVDAVIDCMFDIQAAIRPSIYETNAQRKLSMRKELSEVTLPLWLQYLERWLERAGTTFFVGEEITICDLVIYTRMKWLRRGVLVGIPDTILRNFRRVRAHSEAVASHPKVDDYYKNGPGKVTGDGSPPIXXXXXXXXXXX TLPSNGD
Sbjct: 1 MSSITLTYFDIPGPAEAIRLAFYVGGIPFKDRRVSRQEFAKIKR----------DLPFAQLPILTVDDEVFPQSAAILRYAGKIGGLYPSDPIAAAKVDAVIDCMFDIQAAIRPSIYETNAQRKLSMRKELSEVTLPLWLQYLERWLERAGTTFFVGEEITICDLVIYTRMKWLRRGVLVGIPDTILRNFRRVRAHSEAVASHPKVDDYYKNGPGKVTGDGSPPIXXXXXXXXXXXXTLPSNGD 234
BLAST of mRNA_Ecto-sp6_S_contig92.18392.1 vs. uniprot
Match: A0A7S2V6C7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6C7_9STRA) HSP 1 Score: 170 bits (431), Expect = 8.470e-46 Identity = 91/217 (41.94%), Postives = 132/217 (60.83%), Query Frame = 2
Query: 95 QSHQMSSITLTYFDIPGPAEAIRLAFYVGGIPFKDRRVSRQEFAKIKRGPFALSCRIPDLPFAQLPILTVDDEVFPQSAAILRYAGKIGGLYPSDPIAAAKVDAVIDCMFDIQAAIRPSIYETNAQRKLSMRKELSEVTLPLWLQYLERWLERAGTTFFVGEEITICDLVIYTRMKWLRRGVLVGIPDTILRNFRRVRAHSEAVASHPKVDDYYKNG 745
QS ++I LTYF +PG A RLAFYVGG+ F+D V ++F +K LP QLP+L V+ + +S AILRYAGK+ GLYPSDP+ A K D +ID + + +I E +A++K+ MR+EL+ TLP YLE L + G F +G+++TI DL + ++ WL +G+L GIP + + F +V+A EA +H KV +YY +G
Sbjct: 5 QSTMATTIKLTYFPLPGRAGYTRLAFYVGGVDFEDVIVKGEDFQAMKDS----------LPGKQLPVLEVNGVTYCESMAILRYAGKLSGLYPSDPVEALKCDMLIDMIQGAGNKVAATIREPDAEKKMKMREELASQTLPTLFGYLEEQLNKFGGNFCIGDQLTIADLELLIKVTWLTKGILDGIPPSWIDPFTKVKAIVEATKNHEKVAEYYASG 211
BLAST of mRNA_Ecto-sp6_S_contig92.18392.1 vs. uniprot
Match: A0A061SAH2_9CHLO (Prostaglandin-H2 D-isomerase n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SAH2_9CHLO) HSP 1 Score: 169 bits (429), Expect = 1.290e-45 Identity = 88/202 (43.56%), Postives = 127/202 (62.87%), Query Frame = 2
Query: 122 LTYFDIPGPAEAIRLAFYVGGIPFKDRRVSRQEFAKIKRGPFALSCRIPDLPFAQLPILTVDDEVFPQSAAILRYAGKIGGLYPSDPIAAAKVDAVIDCMFDIQAAIRPSIYETNAQRKLSMRKELSEVTLPLWLQYLERWLERAGTT-FFVGEEITICDLVIYTRMKWLRRGVLVGIPDTILRNFRRVRAHSEAVASHPKV 724
L+YFD G AE IRLAF VGGI F+D R R+++ ++K P P+ +P LT+ D V+ QS AILRYAGK+ GLYP+DP+ A VD ++D + D+ ++P++ E + ++K+ MRK L+E TLP WL Y + +E G++ + VG+ +TI DL +YT + L G+L GIP TI F +V A E V + KV
Sbjct: 5 LSYFDFKGVAEPIRLAFAVGGIDFEDHRFQREDWPQLK----------PKTPYGSVPTLTIGDRVYAQSNAILRYAGKLAGLYPTDPVEALAVDQIVDALEDMFLHVKPTVQEQDEKKKMEMRKVLAEETLPKWLGYFNKHIEENGSSGYIVGDSLTIADLKLYTLIGLLTSGMLDGIPKTIAEPFPKVTALLEKVGADEKV 196
BLAST of mRNA_Ecto-sp6_S_contig92.18392.1 vs. uniprot
Match: A0A3C1L1F1_9DELT (Uncharacterized protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A3C1L1F1_9DELT) HSP 1 Score: 167 bits (423), Expect = 1.150e-44 Identity = 94/204 (46.08%), Postives = 128/204 (62.75%), Query Frame = 2
Query: 110 SSITLTYFDIP-GPAEAIRLAFYVGGIPFKDRRVSRQEFAKIKRGPFALSCRIPDLPFAQLPILTVDDEVFPQSAAILRYAGKIGGLYP-SDPIAAAKVDAVIDCMFDIQAAIRPSIYETNAQRKLSMRKELSEVTLPLWLQYLERWLERAGTT-FFVGEEITICDLVIYTRMKWLRRGVLVGIPDTILRNFRRVRAHSEAVAS 712
+++ L Y+D P AE RLA ++GGI F+D R +RQ+ ++KR +LPF QLP+L V DEV Q+ AI RY G++ GLYP DP+ AA+VDAVID DI IRPSI E + +KL+MR ++ E +LP WL +L+RWLE G F VGE +TI DL ++ + WLR GVL GIP+ I + + AH + S
Sbjct: 3 TTLRLVYWDFPFWRAEVCRLALHLGGIEFEDVRPNRQQSQQMKRDH--------ELPFGQLPVLYVGDEVIAQTGAIARYCGRLAGLYPHDDPLKAARVDAVIDAATDITWLIRPSIREPDPAKKLAMRAQIVETSLPTWLGHLQRWLECHGDQGFVVGESLTIGDLALWRLVGWLRSGVLDGIPENIGEHLPLLMAHQHKIGS 198
BLAST of mRNA_Ecto-sp6_S_contig92.18392.1 vs. uniprot
Match: D8LHF0_ECTSI (Glutathione S-transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHF0_ECTSI) HSP 1 Score: 160 bits (405), Expect = 3.600e-42 Identity = 84/216 (38.89%), Postives = 124/216 (57.41%), Query Frame = 2
Query: 107 MSSITLTYFDIPGPAEAIRLAFYVGGIPFKDRRVSRQEFAKIKRGPFALSCRIPDLPFAQLPILTVDDEVFPQSAAILRYAGKIGGLYPSDPIAAAKVDAVIDCMFDIQAAIRPSIYETNAQRKLSMRKELSEVTLPLWLQYLERWLERAGTTFFVGEEITICDLVIYTRMKWLRRGVLVGIPDTILRNFRRVRAHSEAVASHPKVDDYYKNGPGK 754
M+ + LTYF+ E +RLA G+ + D RV +++ +K P LP+ Q+P+L VD V PQS AILRY GKIG LYP+DPI AA D+ D + DIQ +R I+E +A +K +RK+L E LP WL LE+ L+ AG +F G++++I D+ + R+ WL G G+P T+L V + + V + P++ Y + P K
Sbjct: 1 MAPMKLTYFEFAALGEPLRLALAQSGVEWIDNRVPSEQWPTLK----------PTLPYQQMPVLEVDGAVIPQSLAILRYVGKIGNLYPTDPIQAAFADSATDAVSDIQGYMRGIIFEKDADKKAQLRKDLVETLLPTWLANLEKALKLAGGEYFAGDKLSIGDIAVVARLNWLTDGTFEGVPSTLLDESPLVSSLVQRVMAEPRIVAYMEERPKK 206
BLAST of mRNA_Ecto-sp6_S_contig92.18392.1 vs. uniprot
Match: A0A7S2SNE8_9STRA (Hypothetical protein n=2 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SNE8_9STRA) HSP 1 Score: 159 bits (403), Expect = 6.350e-42 Identity = 88/204 (43.14%), Postives = 125/204 (61.27%), Query Frame = 2
Query: 113 SITLTYFDIPGPAEAIRLAFYVGGIPFKDRRVSRQEFAKIKRGPFALSCRIPDLPFAQLPILTVDDEVFPQSAAILRYAGKIGGLYPSDPIAAAKVDAVIDCMFDIQAAIRPSIYETNAQRKLSMRKELSEVTLPLWLQYLERWLERAGTTFFVGEEITICDLVIYTRMKWLRRGVLVGIPDTILRNFRRVRAHSEAVASHPKV 724
S+ L+YFD G AEAIRLAF VG I F+D R++R+ F K K PDLPF LP L++ D+ F QS A+LRYAGK+ GLYP+D + A KVD ++D + DIQ A+RPS +E + ++KLSMRKE E P ++ +E +E VG+++TI DLV+Y G L GIP + ++ + ++AV + +V
Sbjct: 6 SLKLSYFDGKGRAEAIRLAFAVGKIEFEDERLAREAFIKRK----------PDLPFGSLPTLSIGDKQFAQSNALLRYAGKLAGLYPADALEALKVDQILDAVEDIQGALRPSFFEQDKEKKLSMRKEFMENAFPRYVSGIESLVEGKWA---VGDKMTIADLVLYQLKDTFTSGFLDGIPKNAFDEYSKISSVADAVGLNAEV 196
BLAST of mRNA_Ecto-sp6_S_contig92.18392.1 vs. uniprot
Match: A0A2E7BV08_9DELT (Uncharacterized protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A2E7BV08_9DELT) HSP 1 Score: 159 bits (401), Expect = 1.550e-41 Identity = 87/206 (42.23%), Postives = 120/206 (58.25%), Query Frame = 2
Query: 113 SITLTYFDIP-GPAEAIRLAFYVGGIPFKDRRVSRQEFAKIKRGPFALSCRIPDLPFAQLPILTVDDEVFPQSAAILRYAGKIGGLYPSDPIAAAKVDAVIDCMFDIQAAIRPSIYETNAQRKLSMRKELSEVTLPLWLQYLERWLERAGTT-FFVGEEITICDLVIYTRMKWLRRGVLVGIPDTILRNFRRVRAHSEAVASHPKV 724
++ L YFD P AE R+A ++G IPF+D R SR+EF ++KR +LP+ QLP+L VDD QS AI RY GK+ GLYPSD + AA+ D ++D I + PS+ + + K +R+ L++ P WL LE LE G FFVGE +T+ DL+I+ + WLR G+L GIP +L F + H E V HP V
Sbjct: 4 ALRLIYFDFPFWRAEPSRIALFIGDIPFEDVRPSREEFLRMKRTG--------ELPYGQLPVLDVDDVRIAQSVAIARYCGKVSGLYPSDALQAARCDELLDTATQITQDLGPSMRSKDPEEKARLRQNLAQKIFPRWLGMLEARLEANGDNGFFVGESLTMADLIIWRLLGWLRGGILDGIPTDLLDPFPGLLGHQETVGQHPGV 201
BLAST of mRNA_Ecto-sp6_S_contig92.18392.1 vs. uniprot
Match: A0A3F2RK48_9STRA (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RK48_9STRA) HSP 1 Score: 165 bits (417), Expect = 2.540e-41 Identity = 86/210 (40.95%), Postives = 132/210 (62.86%), Query Frame = 2
Query: 113 SITLTYFDIPGPAEAIRLAFYVGGIPFKDRRVSRQEFAKIKRGPFALSCRIPDLPFAQLPILTVDDEVFPQSAAILRYAGKIGGLYP-SDPIAAAKVDAVIDCMFDIQAAIRPSIYETNAQRKLSMRKELSEVTLPLWLQYLERWLERAGTT-FFVGEEITICDLVIYTRMKWLRRGVLVGIPDTILRNFRRVRAHSEAVASHPKVDDYY 736
+I LTYF G AEA RL FY+GG+PF+D+R++ Q+F +K LP Q+PIL VD E+F QS AI+RYAG++ GLYP S P A K+D ++ M +++ + PS YE++A +K +MR+EL+ TLP + + +E LE+ F +++ + D+ IY +K LR G + IP T+L ++ + + E VA+HPKV ++Y
Sbjct: 29 NIKLTYFAAAGRAEAQRLVFYLGGVPFEDKRINHQQFTAMKES----------LPLGQVPILEVDGEIFTQSHAIMRYAGRVSGLYPNSTPYLALKIDELLHAMAEVEEQMGPSFYESDADKKKAMREELAATTLPRYARLIEARLEKMQQLPAFQSDKVYVHDVAIYAWVKSLRAGYIDSIPTTVLDGYKLLNSTYERVAAHPKVKEWY 228
BLAST of mRNA_Ecto-sp6_S_contig92.18392.1 vs. uniprot
Match: M4B167_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B167_HYAAE) HSP 1 Score: 164 bits (415), Expect = 2.960e-41 Identity = 87/211 (41.23%), Postives = 134/211 (63.51%), Query Frame = 2
Query: 113 SITLTYFDIPGPAEAIRLAFYVGGIPFKDRRVSRQEFAKIKRGPFALSCRIPDLPFAQLPILTVDDEVFPQSAAILRYAGKIGGLYPSD-PIAAAKVDAVIDCMFDIQAAIRPSIYETNAQRKLSMRKELSEVTLPLWLQYLERWLERAGTT-FFVGEEITICDLVIYTRMKWLRRGVLVGIPDTILRNFRRVRAHSEAVASHPKVDDYYK 739
SI LTYF G AEA RL FY+GGIPF+D+R++R++F +K P Q+P L ++ +V QS A++RYAG++ GLYPS P+ A K+D V+ M +I+A + PS YE++ +K +MR+EL+ VTLP + LE L++ T FF + I + ++ IY +K LR GV+ IP T+L +++ + + VA+HPKV ++Y+
Sbjct: 6 SIKLTYFSAAGRAEAARLIFYIGGIPFEDKRITREQFMAMKD----------TFPLGQVPTLEINGDVMTQSYAMMRYAGRLSGLYPSTRPVLALKIDEVLSVMGEIEARMVPSFYESDVAKKKAMREELTTVTLPRYAGLLEACLQKMKQTPFFQSDRIYVHEVAIYIWVKSLRSGVIDFIPTTVLSSYQLLNEMHDKVANHPKVQEWYR 206
BLAST of mRNA_Ecto-sp6_S_contig92.18392.1 vs. uniprot
Match: A0A1V9YVC1_9STRA (Glutathione S-transferase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YVC1_9STRA) HSP 1 Score: 157 bits (397), Expect = 5.430e-41 Identity = 87/209 (41.63%), Postives = 127/209 (60.77%), Query Frame = 2
Query: 113 SITLTYFDIPGPAEAIRLAFYVGGIPFKDRRVSRQEFAKIKRGPFALSCRIPDLPFAQLPILTVDDEVFPQSAAILRYAGKIGGLYPS-DPIAAAKVDAVIDCMFDIQAAIRPSIYETNAQRKLSMRKELSEVTLPLWLQYLERWLERA-GTTFFVGEEITICDLVIYTRMKWLRRGVLVGIPDTILRNFRRVRAHSEAVASHPKVDDY 733
++ LTYF+ PG AE RLA ++ +PF+D R+ R +F R P LPF Q+P LT++ EVF QS + RY G + GLYPS DP+ A +VD ++ DI + PS++E + +K++MR+EL+EVTLP LE L G +FVG+ +T+ D+ +Y K L G L GIP TI+ + R A ++AVA+HPKV ++
Sbjct: 5 TLKLTYFNAPGRAELTRLALFINDVPFEDERLDRDQFL----------ARKPTLPFKQVPTLTINGEVFAQSHGMARYVGVLTGLYPSNDPLRAYRVDEILAFSDDIVNKLIPSLFEQDVTKKMAMRRELAEVTLPGLFPLLEARLRATPGGKYFVGDTLTLADIELYCMRKNLTSGHLDGIPTTIIDAYPRWNAIADAVAAHPKVQEW 203 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig92.18392.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig92.18392.1 >prot_Ecto-sp6_S_contig92.18392.1 ID=prot_Ecto-sp6_S_contig92.18392.1|Name=mRNA_Ecto-sp6_S_contig92.18392.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=245bp MSSITLTYFDIPGPAEAIRLAFYVGGIPFKDRRVSRQEFAKIKRGPFALSback to top mRNA from alignment at Ecto-sp6_S_contig92:158073..162935- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig92.18392.1 ID=mRNA_Ecto-sp6_S_contig92.18392.1|Name=mRNA_Ecto-sp6_S_contig92.18392.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=4863bp|location=Sequence derived from alignment at Ecto-sp6_S_contig92:158073..162935- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig92:158073..162935- >mRNA_Ecto-sp6_S_contig92.18392.1 ID=mRNA_Ecto-sp6_S_contig92.18392.1|Name=mRNA_Ecto-sp6_S_contig92.18392.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=735bp|location=Sequence derived from alignment at Ecto-sp6_S_contig92:158073..162935- (Ectocarpus species6 EcLAC_371)back to top |