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Homology
BLAST of mRNA_Ecto-sp6_S_contig92.18385.1 vs. uniprot
Match: D8LF98_ECTSI (SH3 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF98_ECTSI) HSP 1 Score: 782 bits (2019), Expect = 8.990e-279 Identity = 453/459 (98.69%), Postives = 454/459 (98.91%), Query Frame = 1
Query: 1 MFKKKSSKEKNTEEEAPTSPKGEAAANYPGLDVGGGTDPAGGKGGIIDKFSTGRRRLKENIAQKTGKEAVDNSEFEERSQKVADLKEKVGKVRDAMKRQLDCSRALCLACADLGNACSEVGLRDVGFQNAQFQLDEDMRKQLDAAVAKAVESLENKMAPFAELDKMIMSRNKLKLDYDHYMRKVRDLKEKPGPDAAKLSNNEAKLTAARQRLQEATGKLYKGFGYYDAVGGTLCQPEIEMLKQAQQGFFGSAFSVVKGVPARDPQEVAREIESVGKDGMNAPFTLPASEYGSSGGGGLSNMSGMSGAIKDASTRAGGDDSPDRSPASAYVPSASAPWLTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADTQPAAAASGWGAGTKGPPAPPAAGQQQARALFSYTAADNTELSLTEGEVLTVVSQDQSGWWTGEKGGRKGLFPSNYVNLI 1377
MFKKKSSKEKNTEEEAPTSPKGEA NY GLDVGGG DPAGGKGGIIDKFSTGRRRLKENIAQKTGKEAVDNSEFEERSQ+VADLKEKVGKVRDAMKRQLDCSRALCLACADLGNACSEVGLRDVGFQNAQFQLDEDMRKQLDAAVAKAVESLENKMAPFAELDKMIMSRNKLKLDYDHYMRKVRDLKEKPG DAAKLSNNEAKLTAARQRLQEATGKLYKGFGYYDAVGGTLCQPEIEMLKQAQQGFFGSAFSVVKGVPARDPQEVAREIESVGKDGMNAPFTLPASEYGSSGGGGLSNMSGMSGAIKDASTRAGGDDSPDRSPASAYVPSASAPWLTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADTQPAAAASGWGAGTKGPPAPPAAGQQQARALFSYTAADNTELSLTEGEVLTVVSQDQSGWWTGEKGGRKGLFPSNYVNLI
Sbjct: 1 MFKKKSSKEKNTEEEAPTSPKGEATPNYAGLDVGGGADPAGGKGGIIDKFSTGRRRLKENIAQKTGKEAVDNSEFEERSQRVADLKEKVGKVRDAMKRQLDCSRALCLACADLGNACSEVGLRDVGFQNAQFQLDEDMRKQLDAAVAKAVESLENKMAPFAELDKMIMSRNKLKLDYDHYMRKVRDLKEKPGSDAAKLSNNEAKLTAARQRLQEATGKLYKGFGYYDAVGGTLCQPEIEMLKQAQQGFFGSAFSVVKGVPARDPQEVAREIESVGKDGMNAPFTLPASEYGSSGGGGLSNMSGMSGAIKDASTRAGGDDSPDRSPASAYVPSASAPWLTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADTQPAAAASGWGAGTKGPPAPPAAGQQQARALFSYTAADNTELSLTEGEVLTVVSQDQSGWWTGEKGGRKGLFPSNYVNLI 459
BLAST of mRNA_Ecto-sp6_S_contig92.18385.1 vs. uniprot
Match: A0A835YV50_9STRA (SH3 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV50_9STRA) HSP 1 Score: 270 bits (690), Expect = 3.240e-79 Identity = 206/418 (49.28%), Postives = 258/418 (61.72%), Query Frame = 1
Query: 133 GIIDKFSTGRRRLKENIAQKTGKEAVDNSEFEERSQKVADLKEKVGKVRDAMKRQLDCSRALCLACADLGNACSEVGLRDVGFQNAQFQLDEDMRKQLDAAVAKAVESLENKMAPFAELDKMIMSRNKLKLDYDHYMRKVRDLKEKPGPDAAKLSNNEAKLTAARQRLQEATGKLYKGFGYYDAVGGTLCQPEIEMLKQAQQGFFGSAFSVVKGVPARDPQEVAREIESVGKDGMNAPFTLPASEYGSSGGGGLSNMSGMSGAIKDASTRAGGDDSPDRSPASAYVPSASAPWLTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADTQP------AAAASGWGAGTKGPPAPPAAGQQQARALFSYTAADNTELSLTEGEVLTVVSQDQSGWWTGEKGGRKGLFPSNYV 1368
GI K + RRR E + QK GKE D+++FE+R + DL KV KVRD+MK LD +RA+ DL NAC + RD F Q QLD+ MR LD +V KA++SL+ K+APF ELD+ + +RN LKLDYDHY+RKVR+LKEK G DA+K++NNE KL AAR + +AT +YK F YYDAVGG L PE+E K AQ+ F+ +A + VK VP RDP +VA E++ +G+DG N P A+ Y S S + S + + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +P A A G P PP+ G ARAL+ YTA DNTELSLT G+V+ V+ + +SGWW GEK G +GLFP+NYV
Sbjct: 37 GIKGKMAVNRRRFNEKLGQKMGKEGTDDADFEDRHRATQDLHFKVCKVRDSMKALLDATRAMSQRAVDLSNACGDADARDQDFITTQLQLDQAMRSMLDDSVGKALDSLDRKLAPFKELDERVKTRNNLKLDYDHYVRKVRELKEKSGADASKIANNEMKLEAARVAVHKATLSVYKAFNYYDAVGGRLVAPEVEAFKAAQRAFYMAALNCVKDVPLRDPVQVAAEVDRLGEDGSNRPV---ATGYDGSYAAASSAHNRQSSGLAQSQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPNPFGTPVAVAVPMGIA----PPPPSQGGGSARALYDYTAHDNTELSLTTGDVIRVMEKHESGWWVGEKAGVRGLFPANYV 447
BLAST of mRNA_Ecto-sp6_S_contig92.18385.1 vs. uniprot
Match: A0A1E1W9D7_PECGO (SH3 domain-containing protein (Fragment) n=1 Tax=Pectinophora gossypiella TaxID=13191 RepID=A0A1E1W9D7_PECGO) HSP 1 Score: 72.0 bits (175), Expect = 2.240e-10 Identity = 38/83 (45.78%), Postives = 52/83 (62.65%), Query Frame = 1
Query: 1135 DTQPAAAASGWGAGTKGPPAPPAAGQQQARALFSYTAADNTELSLTEGEVLTVVSQD--QSGWWTGEKGGRKGLFPSNYVNLI 1377
D QPAAA P PP ++Q R LF YTA ++ EL+L EG+++++VS+D GWW GE GR+GLFP N+V +I
Sbjct: 16 DAQPAAAFE------PAPALPPKPVKEQCRVLFPYTAVNDDELTLAEGDIVSIVSKDAPDRGWWRGELHGRQGLFPDNFVQII 92
BLAST of mRNA_Ecto-sp6_S_contig92.18385.1 vs. uniprot
Match: A0A058ZG03_FONAL (Myosin I n=1 Tax=Fonticula alba TaxID=691883 RepID=A0A058ZG03_FONAL) HSP 1 Score: 75.1 bits (183), Expect = 3.880e-10 Identity = 37/72 (51.39%), Postives = 49/72 (68.06%), Query Frame = 1
Query: 1168 GAGTKGPPAPPAAGQQ--QARALFSYTAADNTELSLTEGEVLTVVSQDQSGWWTGEKGGRKGLFPSNYVNLI 1377
GA K P PPA+ + Q RAL+ Y A + ELSL+ G+V+++ ++D GWWTG GRKGLFPSNYV +I
Sbjct: 1042 GASGKRPAPPPASKPKLPQCRALYDYAACEADELSLSVGDVVSITAKDDGGWWTGTCNGRKGLFPSNYVEMI 1113
BLAST of mRNA_Ecto-sp6_S_contig92.18385.1 vs. uniprot
Match: A0A507CPF9_9FUNG (Uncharacterized protein (Fragment) n=1 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507CPF9_9FUNG) HSP 1 Score: 73.6 bits (179), Expect = 8.380e-10 Identity = 32/61 (52.46%), Postives = 43/61 (70.49%), Query Frame = 1
Query: 1186 PPAPPAAGQQQARALFSYTAADNTELSLTEGEVLTVVSQDQSGWWTGEKGGRKGLFPSNYV 1368
PPAPPA RAL+ Y AA+ ELS G+++TV+S+D +GWWTG G++GLFP+NY
Sbjct: 571 PPAPPAKKLPTVRALYDYAAAEADELSFKAGDMITVISKDDAGWWTGNVKGKRGLFPANYA 631
BLAST of mRNA_Ecto-sp6_S_contig92.18385.1 vs. uniprot
Match: A0A1Y3BI18_EURMA (SH3 domain-containing protein (Fragment) n=2 Tax=Pyroglyphidae TaxID=6952 RepID=A0A1Y3BI18_EURMA) HSP 1 Score: 65.5 bits (158), Expect = 1.260e-9 Identity = 31/77 (40.26%), Postives = 48/77 (62.34%), Query Frame = 1
Query: 1186 PPAPPAAGQQQARALFSYTAADNTELSLTEGEVLTVVSQDQ--SGWWTGEKGGRKGLFPSNYVNLI*CGLWTAAGQP 1410
P PP ++QA+ LF Y A ++ EL++ EG+++T++S++ +GWW GE GR LFP N+V +I L QP
Sbjct: 3 PKLPPKPQREQAKVLFRYDAQNDDELTIKEGDIITIISKENEDAGWWKGELNGRIALFPDNFVEIIKQPLPPPQPQP 79
BLAST of mRNA_Ecto-sp6_S_contig92.18385.1 vs. uniprot
Match: D3AY24_POLPP (SH3 domain-containing protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3AY24_POLPP) HSP 1 Score: 72.8 bits (177), Expect = 1.420e-9 Identity = 31/73 (42.47%), Postives = 46/73 (63.01%), Query Frame = 1
Query: 1210 QQQARALFSYTAADNTELSLTEGEVLTVVSQDQSGWWTGEKGGRKGLFPSNYVNLI*CGLWTAAGQPGGRTKR 1428
Q+Q +AL+ Y +D TEL G+++TV+ +D+SGWW G GR+GLFPSNY ++I P ++KR
Sbjct: 347 QKQVKALYDYVGSDATELDFYTGDIITVLDEDESGWWKGSVDGREGLFPSNYCDII---------TPSNQSKR 410
BLAST of mRNA_Ecto-sp6_S_contig92.18385.1 vs. uniprot
Match: A0A7D9LDY7_PARCT (Unconventional myosin-Ie, partial (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9LDY7_PARCT) HSP 1 Score: 66.2 bits (160), Expect = 1.480e-9 Identity = 33/75 (44.00%), Postives = 43/75 (57.33%), Query Frame = 1
Query: 1177 TKGPPAP--------PAAGQQQARALFSYTAADNTELSLTEGEVLTVVSQDQSGWWTGEKGGRKGLFPSNYVNLI 1377
TK PPAP P + R L++Y A D ELS GEV+ ++ ++ SGWWTG G++GLFP NYV I
Sbjct: 36 TKRPPAPGRPKPGLPPRPSLPKCRTLYAYDAQDTEELSFNAGEVVDILKEEDSGWWTGRLRGKEGLFPYNYVEKI 110
BLAST of mRNA_Ecto-sp6_S_contig92.18385.1 vs. uniprot
Match: A0A4P9YDJ5_ROZAC (Uncharacterized protein (Fragment) n=2 Tax=Rozella allomycis (strain CSF55) TaxID=988480 RepID=A0A4P9YDJ5_ROZAC) HSP 1 Score: 65.5 bits (158), Expect = 1.790e-9 Identity = 33/66 (50.00%), Postives = 41/66 (62.12%), Query Frame = 1
Query: 1186 PPAPP--AAGQQQARALFSYTAADNTELSLTEGEVLTVVSQDQSGWWTGEKGGRKGLFPSNYVNLI 1377
PP PP A + +AL+ Y AA+N ELS +EG ++T V + WW GE GR GLFPSNYV I
Sbjct: 29 PPKPPRGVAEEITVKALYDYDAAENNELSFSEGAIITNVEKTTPDWWQGEINGRIGLFPSNYVEQI 94
BLAST of mRNA_Ecto-sp6_S_contig92.18385.1 vs. uniprot
Match: A0A194PMT5_PAPXU (Intersectin-1 n=1 Tax=Papilio xuthus TaxID=66420 RepID=A0A194PMT5_PAPXU) HSP 1 Score: 70.9 bits (172), Expect = 5.060e-9 Identity = 34/66 (51.52%), Postives = 44/66 (66.67%), Query Frame = 1
Query: 1186 PPAPPAAGQQQARALFSYTAADNTELSLTEGEVLTVVSQD--QSGWWTGEKGGRKGLFPSNYVNLI 1377
P PP ++Q R LF YTA + EL+L EGEV+T++S+D GWW GE GR GLFP N+V L+
Sbjct: 146 PALPPKPVKEQCRVLFPYTAVNEDELTLAEGEVVTILSKDAPDRGWWRGELHGRVGLFPDNFVQLL 211
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Stop | 1 |
| Start | 1 |
| Seed ortholog score | 790.4 |
| Seed ortholog evalue | 4.5e-226 |
| Seed eggNOG ortholog | 2880.D8LF98 |
| Model size | 2228 |
| KEGG ko | ko:K10356,ko:K12562,ko:K21421 |
| KEGG TC | 5.B.1.1.1 |
| KEGG Pathway | ko04066,ko04144,ko04145,ko04216,ko04217,ko04621,ko04666,ko04670,ko04933,ko05140,map04066,map04144,map04145,map04216,map04217,map04621,map04666,map04670,map04933,map05140 |
| Hectar predicted targeting category | other localisation |
| Exons | 8 |
| EggNOG free text desc. | translation initiation factor activity |
| EggNOG OGs | COG5022@1,KOG0162@2759 |
| Ec32 ortholog description | SH3 domain |
| Ec32 ortholog | Ec-01_004150.1 |
| Cds size | 1380 |
| COG Functional cat. | Z |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko01000,ko01009,ko03036,ko04131,ko04147,ko04812 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1682350558.1792445-CDS-Ecto-sp6_S_contig92:83210..83313 | 1682350558.1792445-CDS-Ecto-sp6_S_contig92:83210..83313 | Ectocarpus species6 EcLAC_371 | CDS | Ecto-sp6_S_contig92 83211..83313 + |
| 1682350558.1915305-CDS-Ecto-sp6_S_contig92:85631..85792 | 1682350558.1915305-CDS-Ecto-sp6_S_contig92:85631..85792 | Ectocarpus species6 EcLAC_371 | CDS | Ecto-sp6_S_contig92 85632..85792 + |
| 1682350558.2013674-CDS-Ecto-sp6_S_contig92:86627..86912 | 1682350558.2013674-CDS-Ecto-sp6_S_contig92:86627..86912 | Ectocarpus species6 EcLAC_371 | CDS | Ecto-sp6_S_contig92 86628..86912 + |
| 1682350558.21131-CDS-Ecto-sp6_S_contig92:87343..87559 | 1682350558.21131-CDS-Ecto-sp6_S_contig92:87343..87559 | Ectocarpus species6 EcLAC_371 | CDS | Ecto-sp6_S_contig92 87344..87559 + |
| 1682350558.221294-CDS-Ecto-sp6_S_contig92:88263..88388 | 1682350558.221294-CDS-Ecto-sp6_S_contig92:88263..88388 | Ectocarpus species6 EcLAC_371 | CDS | Ecto-sp6_S_contig92 88264..88388 + |
| 1682350558.231372-CDS-Ecto-sp6_S_contig92:89059..89351 | 1682350558.231372-CDS-Ecto-sp6_S_contig92:89059..89351 | Ectocarpus species6 EcLAC_371 | CDS | Ecto-sp6_S_contig92 89060..89351 + |
| 1682350558.2411332-CDS-Ecto-sp6_S_contig92:89919..90018 | 1682350558.2411332-CDS-Ecto-sp6_S_contig92:89919..90018 | Ectocarpus species6 EcLAC_371 | CDS | Ecto-sp6_S_contig92 89920..90018 + |
| 1682350558.2502842-CDS-Ecto-sp6_S_contig92:90651..90750 | 1682350558.2502842-CDS-Ecto-sp6_S_contig92:90651..90750 | Ectocarpus species6 EcLAC_371 | CDS | Ecto-sp6_S_contig92 90652..90750 + |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1682350558.2611144-UTR-Ecto-sp6_S_contig92:90750..91598 | 1682350558.2611144-UTR-Ecto-sp6_S_contig92:90750..91598 | Ectocarpus species6 EcLAC_371 | UTR | Ecto-sp6_S_contig92 90751..91598 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig92.18385.1 >prot_Ecto-sp6_S_contig92.18385.1 ID=prot_Ecto-sp6_S_contig92.18385.1|Name=mRNA_Ecto-sp6_S_contig92.18385.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=460bp
MFKKKSSKEKNTEEEAPTSPKGEAAANYPGLDVGGGTDPAGGKGGIIDKF STGRRRLKENIAQKTGKEAVDNSEFEERSQKVADLKEKVGKVRDAMKRQL DCSRALCLACADLGNACSEVGLRDVGFQNAQFQLDEDMRKQLDAAVAKAV ESLENKMAPFAELDKMIMSRNKLKLDYDHYMRKVRDLKEKPGPDAAKLSN NEAKLTAARQRLQEATGKLYKGFGYYDAVGGTLCQPEIEMLKQAQQGFFG SAFSVVKGVPARDPQEVAREIESVGKDGMNAPFTLPASEYGSSGGGGLSN MSGMSGAIKDASTRAGGDDSPDRSPASAYVPSASAPWLTGGSSGGGGMAG ASSGTGSFKAPPAGGGGSSWWDKHSATADTQPAAAASGWGAGTKGPPAPP AAGQQQARALFSYTAADNTELSLTEGEVLTVVSQDQSGWWTGEKGGRKGL FPSNYVNLI* back to topmRNA from alignment at Ecto-sp6_S_contig92:83211..91598+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp6_S_contig92.18385.1 ID=mRNA_Ecto-sp6_S_contig92.18385.1|Name=mRNA_Ecto-sp6_S_contig92.18385.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=8388bp|location=Sequence derived from alignment at Ecto-sp6_S_contig92:83211..91598+ (Ectocarpus species6 EcLAC_371) ATGTTTAAGAAGAAGAGCTCCAAGGAGAAAAACACTGAGGAGGAGGCGCC
AACTTCTCCCAAGGGAGAGGCTGCGGCAAACTACCCCGGACTGGATGTGG
GAGGTGAGATAAGAAGCATTGCACAGCAGCAGCAGCAGTGAGTCGAAAGA
CTCCGGTGCTTGTGAATGTTAAGTAGTGTGCTTTTGGACCACCCGCTGAG
GTCAAAGAGCAAGCGCGAACAGCTGTTGCGCGACGAACGAACGATGCAGA
GAAGAGATGTGGTGGATGTTGGTCAAATGGCATTAGTCCGCGCGCCGAGA
CTCAGCAGCAGGAGGTTGCTCTCGCCTCAACATCAACTATCTGGACCTAC
GGTAGGGATAAAGCTGTTCGTCGAGCCTGCCGCCTTCTTGACATGTGCTG
TTTCTTTTTCAGAGGTAGAGCCGCGCTCTGCCGCACACCTTAAAAGCATG
CCAATACCTACAGCGTCTCGACGAGATGTTTGTATTTCCTAAGCTAGCCA
GACTCCGAATGAAATACTTGGTCCGCCCGACAGCTCCTGTCATGATGGCG
GCCGTTGAGAGTCGGAAGCAGGAATAATGTGTGTTCTTCTGCTGATCTCT
CTCTCTCTGCACCGAGGGGATGCCAAGGGTCAGTCAGATCAAGCCCGGGA
GTCTGTTGCTGGTGTAGCCTACGCGTTCTGTACACATCCCCTATGAGCAC
CCAGGCATGCCCTGCTGTACTACAAACCCCGCGCGTGTAGCTTTAGCCGC
GCAACCGGTTCTTCTAAAAACAAAGGCAGACACTGGCCGCAAGTGCTTCA
TGGGCTGCCAGTTGGCAAAATCATCCTTGTGTAGATCGAGCACGGGCACC
GGAAACACCTCTAGCGAGGAGACCAACTCCGTTTTCTACAACAAGAAGGA
TTCATTTATTTGAAACGACAACATTTTCATGGTCGCTAACGACGCTCCAC
AGCGCCGCACTGGCGCACCACTTCTCCGGCGCCGCGTAGACTTCCTGCGT
TACGCTCGGGGGGGCTGGGTCGAAGTTCTTGCCGACGGTCATGACGCCAA
TCCCTGCTTAAAGCATGCGACTTGACAGCCTAGAGCTCAGCGATCGTTGG
CCCAAGTTGTTCGTCTTACCTAAAACATACCCCGTGTCCATCAGCAAGCA
GCGAGGCGGTCCAATTTTTACGTTTGGTATGAGATGTACACAGATTTCTC
GCGTTGGCGCGGTTTTCGTGTATCCCTTGCTTTCGACCTTCGGATGGGGC
AGCATTTGCTGGGTTCGGTGCGAATGAACTGAAAAGAAATCAGCAAGCAT
GGATAAACACTTCGTGTTTGAAAAATACTTCATGTTTGGAACATGAGCGT
GCGGCGTTCGGTCTGGAGAGTCTGCTTGCTCACCCGATGTCGGTTGTCCC
GCTAATAAATATTCTCCCGCAACGGGCTACGAATATTTGACGCCCTTGTT
GTTTGTTTGTCTTTGGTCGATTAATCCAGAAAAAAATCCTTGCGAGGCAC
GACAGCAGGGGATATTTGTAATAACTTAACCCTCCTATGTAGTACTGGAA
GCCTAAATGGGGACACTTTGGGGACACAGCGCTCAAAAATTCTGTTTACC
ACACCTGTAGTCACACCCTAGGCTCCGCTGTGTGAAACGCACGTGAGAAC
CCTTGGTCTATCATGCTTGTGTGACGTGGTACGCTGTGTGACATGCTGTG
TGATGCCTCTCCTCGGCCTCTGACTTGCTGTACACCATCTCCCAACCCGC
GTGTCCCCTAGATCGTAAAGCTGTTGTACATCGCCTGGTACTGGAAAAAT
TTGCAGTTTTTGGCTTCCATTGTATGAAAAGTGTCCCCAAAACACGTGGG
GAAACTTTTCATACAGAAGCCAAGTCACTCTTTGTTTAGCAAGGAGCTCA
GATTCTTTGGAGGGACTGTAGCCCCTCGACCAACATCTGACAATCATTTT
CGAGACATTTTTTTTTTCGGAGAGACTGGGTACTAAATGGGAAGTAGGAA
GACTAACCCAAGAGAGAAGCGCAGCAGGTCAAAACTTGCAACTCTCAACT
TAGCATCAGCATGGCACCGGGTGATGATCGAACAGGCACGAACATGCCTC
CGAGCATCATTCGACTAACAGCAGAACAGCAGTGCCCTTGGCCGCGCTCT
CCACACCCAACCAAGCCCGCACACACGCCAGGGTTGACGTCGTGTCATTG
GTCAGTCGGTGAGGGGGTGCGCACATTTTTTTTTGTGGTACCCTCACCCC
CCCGCCCCGGGGGTTGCCTCTTGGTCACAACGAGCTCGTCAAGGGCGATG
TAAATTCCCAATCTGTGAACACCCACGTGATTATTTCCAAAAAGTTGTAA
AGCAGTTTTTCATCTCGTTTTCTGGTTTCGCACGCACGGGACGCGGCATG
TGTCTGTCTGTACGTACGTAGGCGGCACGGACCCGGCGGGCGGGAAGGGG
GGAATCATCGACAAGTTCAGCACGGGGCGGCGGCGGCTGAAGGAGAACAT
AGCCCAGAAGACTGGGAAGGAGGCGGTGGATAACTCGGAGTTCGAGGAGC
GGTCGCAGAAGGTGGCGGACTTGAAGGAGAAGGTGGGGAGGGAGGGAGGG
AGGGAGGGAGGGATGGACCGGCGTGTGTTGTCCGCGTTTTGTGTTCGTGT
TGGGGGCTTTTCAAAGGTGTGGATGCGTATATGTTGGGCACAGGTTCGAG
GTTGGTTTTGTTTTGTTTTTTGGTCGCCGTTCTTGGGTGGACTGGTCAGG
TCGTGAGAGACAGAAACCTAGGGGTGAAGTTGAGGGCCCGACGGTACGGA
TGACCCTGCGCCCCCCTCACAGCGGACTCACAAGAAGTACTGGCGAAGCG
CGCGGCCCGAAAAAGGGGGCAGTTGTGCCGAGAAAGATGATTTCGCGCAC
TGCGCTTATTGTCGCCTACTTTGAACGCTACTGAGACAAGTGTCACTTCA
TTGGCTTGCTGGTTAGCGCGGATGATGTACTAGGCAGAGAAGCACGCACG
GGATACAACCAGCAATGCTGCGGGAGCACATCGTCACGAATAGCGGCATG
TGGTGCAGGAGAAATGCGTCATGGGCCTGTTTTCCTTTGATACAAATATT
CTGGATCCCAGAGGCTGTAATACTGTATGTACCCTTTCGCTCAACCTCCT
CCGGCCGCCGCCCCCCACACAGTATCGGGGAAGCCGGGGGACTCTTCTTA
GAGAACTTGTCGCAGTTTGGGTCCCGCTTAATCCGCGGTTTAAAAACACT
GGTCAGCCGGTTTTCGTGCGGTCGACGCCGGCCGAATATACAGCGCGCGC
AAACACACGCGCGCCGGTTGGGTGTCTGCTGCCCCCCCCCCCCCTCGAAT
CCTGTCACACCAACCCCCAAAACACACACACACATACCGCACAACACGTC
AACGCCAATGACTGTAGGTGGGCAAGGTGCGGGACGCGATGAAGAGGCAG
CTAGACTGCTCCCGGGCGCTGTGCCTGGCGTGCGCGGACCTCGGGAACGC
GTGCTCGGAGGTGGGGCTGCGAGACGTGGGGTTCCAGAACGCTCAGTTCC
AGCTGGACGAGGACATGAGGAAGCAGCTGGACGCGGCCGTGGCGAAGGCG
GTCGAGTCGCTGGAGAACAAGATGGCGCCCTTCGCTGAGTTGGACAAGAT
GATCATGTCCCGGAACAAGCTCAAGCTCGACTACGACCACTACATGCGCA
AGGTGCAGCAGTGTTTGGGCCGCCTTTTCGCGAGGATTTTATCATTACTC
TATGAAATAGAGAGGGCTCTATGAAATAGAGAGGGGGGGGTTGTATCCCT
AACCCTATCGCTGACCCTAACCCCCACCCCGTACCCTCTACTAAAACCAA
GATAATACCCTCGCGAACGCTACTGGTAATATAATAGTATGTCAGGATGG
GAGGAGGGGGTGGTGGAAGGCGAGTGGTACACCTTTTTCATGGCGGAGGA
GGGTTGGAATTCTGGCGTGCCGTTTCTTTTTTTCGATTTACCGTGACAAT
TGTGGAACGCGCCACACAAGTGTTTTCCGCTTTCAAAAGTCAGATACGGA
CGGACGGACGACTTCCCTTCTCGCTTTTTTGACAGAAAGTTGGCGCATTA
ATTGCTGCAACGTGGTATTTGAATCATGCGCAGGTGAGAGATCTGAAAGA
AAAGCCCGGCCCGGACGCGGCAAAGCTGTCCAACAACGAGGCCAAGCTGA
CGGCGGCGCGGCAGCGGCTGCAGGAGGCGACGGGCAAGCTGTACAAGGGC
TTCGGGTACTACGACGCCGTTGGCGGCACCCTGTGCCAGCCGGAGATTGA
GATGCTCAAGCAGGCGCAGCAGGGCTTCTTCGGGTCTGCCTTTTCGGTGG
TAAGGCGTTTTTTCTTTTTTGCGCGCGTTCGCGTGGGCATTTGCGGAATG
TCATTCGCCTCACGACGGCATTCTTTCTTGTTGGGCTTTGTATGGGTGTA
TGTTGGCACATACACATGTACGTGAAAGCGCGTTTTACGGCGTGGCACAC
GCCGTGGTATGTGAAAAAGCATTAGTGAATGTCGGCACATGCCCATGCGC
ATACAAGCGCGTGTTACGACATGGCACACGCCGTGCTACGTGAGGTATGG
ATGCGCGGGTGTGTGGAGATGTCTTTTGCCAAATCTTGTGAGACTCGCTC
GAGGACAGGTTCTACAAACGTTCGTTGCTATCCATCTACCATCTGAGAAG
GCCTAGGACAGACAGATGTTGGTCGGTGCTGTTTCGCTCGGTCCGTGCGT
TGTCTTGTTTGAATGTGTTTCCGCCTTGTCTCGGTGGTTGGGCGGCGAGC
GAGTGCGACGTCGCTTGCGCGCCACGCGTACACGCATCACACCTCCGACG
AAGCGCAGACGCCATTTTTTTGTCCTGTTTCAGCCTCTTGGAACTGGATG
AAAGTGTCACGAAATTTCGATTTTTCCTCATATCCCAGACAGTCCCTTTT
TGTTGAGTCGGTGGCTTTTTGTTGAGTCGGTCGTGGGGAATGGAAGCGAG
TCGACCGACCCCCGCCCCTCGCCCTCACCCCCGTACGCAACGCGCGTTCG
TAGGTGAAAGGGGTCCCCGCGCGCGACCCGCAGGAGGTGGCGAGAGAGAT
CGAGTCCGTGGGAAAGGACGGCATGAACGCCCCTTTCACCCTGCCGGCAA
GCGAGTACGGATCATCGGGGGGCGGCGGGTAAGATTATTCCTATTAGTGA
CGCTGCAGCTGTTTCTAGCGGGGTGGACAGCTTGTCCCGGTCCTACTTGC
CAGAATCGATGCCGCATGTGTAGGTTTATTTGCAGGCACGCACGCGTTTT
CGTGGCGCCCTCATGTTCTATCCGTGTCCTGGCTAGGGGATTCTGGCACG
TTTCCCTGCGGCGGTGATGTTTGTTGCTGCTGAAAAAGGGCATGGCGGAG
ATGGGCGATCGAAAGATCATTTCAATGTCGTTGCTTTTGCTCCTGCCGAA
ACGAGCGCGTGTGCACAACACGAGAGGGAGGAAGAGAGACAGAGAGGCGC
CTCTAAGGCACGCGCCAGACAGCAGTGCTCCCGACAGGTCGGCCAACAGC
ACCAAGCACAAAGCTCTTCACCACCTGCAGATCGTGGTTGTTGGCCGGAA
GCCTTTCAAAGTCGCATCTCATTGTTTTCGGAAGGCCTTCGACAGGCAAT
TTTCGACTCATTCAGACGCCATCCTCTCTCTCCCCCTGTTTCCCACACCA
AAAAGTGTCAGCCTCAAGAAACCCCCAAGGTTGACAGACAGTAGGATGAA
CCAAGAACAATACTTTGAAAACAACCCAGTTATACTTTATCCCGTGTGTG
TGTACGCTTCTGTTCCCCACCCCCCCCCAAAAAAAAAACTCCCACCAAGG
TTGTCCAACATGTCCGGTATGAGCGGTGCAATCAAGGACGCTTCGACGAG
GGCCGGGGGCGACGACTCGCCAGACCGAAGCCCGGCCTCCGCGTACGTCC
CGTCGGCGTCGGCCCCGTGGTTAACGGGCGGGTCGAGCGGGGGCGGCGGG
ATGGCGGGAGCCTCTTCGGGGACCGGGTCGTTCAAGGCGCCCCCAGCCGG
CGGGGGCGGGAGCAGCTGGTGGGATAAGCACTCGGCGACGGCGGACACCC
AACCGGCGGCGGCCGCTTCGGGGTGGGGGGCAGGGACCAAGGTACGTGTG
TGAGATAAGGGGGGGGGGGGGGGAGTCGAGGAGGTTGTGCCACCGTGCAT
GCAGCGCTTGTGCTCCGGTGGTTGGCGTGCGTGAGTCAGGCTAAGAACTT
CTCCGTGTGAGTCGGCGGAACGAAAAAGACGAAAAAGAGGCCGCCCGCCG
CGGAAAAGCTTTTTTTTTTGTGTGAACGCGACACAAACGTGACACATGTA
GATACGGTTTCACGCGTATATGTATATGCACCCGCAATCATTCGGTGGGG
TCTGTTTGTTGAGCTGTATCCATCGCCCTTGTGTGTCCGTTCGGAAGGTT
GTCTTTTCGTTGGACTTGATGACTCTTTCATGCGACGGTTTGTTGCCTGT
GTGGGGCAGGAGGGGTAAACAGCAATGGGCCGGGGGCGGGTTCTGCCTGT
TTGCTTGCTGTGTTTCCATTCtaaatTAGCGGTCGTTTTCCAAAGAAATG
GAGCGTTGCTCCCTGTTACCTTAAGCTCACGCATGGCTCATCTCGGATGT
CTTCATTTTGTTGTGAACGTGTCCACGCCCCCCCCCGCGCTCGTGGATTA
TTCCGCTAGGGACCTCCGGCGCCACCCGCGGCGGGCCAACAGCAAGCCCG
AGCGCTGTTCAGTTACACCGCAGCGGACAACACGGAGCTCTCGCTCACGG
AGGGCGAGGTTAGTCgGGGTCTTGTGTTGAACAGCCACGGCAGATTATTC
TCGACATGTAGTGTTGGTTTCGTGTTTTTTGTGGGCTGCTGCTGCTGCTG
CTGCTGCTGCTGTTGGTATTGACGCTGCGTTGCCTGAACACGATAGCAAA
CCATGGACACGCGTTGATTTCTACAATATCCGTGTCCGAAGCACCACATA
CTGATGTAGATTATTCGCTAACCTTTCCTTCATTCTTCCAGCCCGTGCGG
CGACGACGTATCCAACCATGGTAATGTTTTTCGTTCACGCCTCTTTTTCT
TGCGTCATTTCTCTTGTGATGTTTTGTCGTTCACGTTGCGAGTGTCATTC
TTGCGTCTGCTGTTGCTGCTGCTACCACTACCGATGTTGGTTGCATGTGC
GAAACACGGACTGAGCCCGTCCATCTGTTGTACAGTGGCCTGTTTTGCGC
CCAGGTTTTCTTGTTGTGAAGGCCTCGAGCCCGCCCTCCCGTTAAGCCGT
TGGTACTGTTTTGTTTTCATGAGCGCTTGCCCCCTCCTCCCCCCGCCGCC
GTCTCGATGTTGATGGTCACCTTATCCTTGTGCTTGCTTCTTCTCTTTCG
GCTTGCTTTTTGGTGAACGACGTGTTTTAACTCTGCTGTAGGTGCTAACG
GTGGTGAGCCAGGATCAGAGCGGATGGTGGACAGGAGAAAAGGGGGGACG
CAAGGGCCTCTTCCCTTCTAACTACGTGAACCTGATCTGATGCGGCCTGT
GGACGGCGGCGGGCCAGCCGGGCGGTCGAACGAAACGTTTTATTTAGCAA
ACTTTCTTCTCGTTGTGTGTGTCGTTCTTGTCCCCGTGTATCCTTGGGCG
TTGATACACGTTGGTGTCTTCTGCGTCATCTACGTGCCACGAGGTAGTTT
GCAATACATCTGTCTGCCTGTCCTCTCTTTCCCTTTTCTGGGCTCGTTGC
TCAAGGTCGCGACAGCCACTAGGGTGCGCGCGGGCGAGATCGGGTTGGAG
GATATGTGGGCCATCGGCGTAGCATATTACTCCTCAAACCTGTAGCCGTA
GCGTGCTTTTTTATCGAGTTAAGCGCTGGTGTGGAGTGGTGCTTTTACCA
CAACAGCAGCAAAGGTATTAACGGAGGGAGAAGCTAATGGGGAATTGTTG
TCCCCCCCCCGTTTTTACCGCGTGCGTCTCATATGGAACGGTGAATGGCT
CTTGGAGCTATGCAGCGGTACCTTGATTTCCCCCCTCTTGGCTTCATCGG
AGTACGGTCGGTTTGGACTGGGATATCCAAGATCGTAAAAGCAATTACTG
TACTTGTAGATGCCTTTCAGAGGAGGCAAGAAAAGTGTCTCTGTTGCCAA
CGGTATATCCTAATCTTTGGGATTTGTTACGATATTGAGGCGTCGCTTAA
GATGCTGCGCTGTTCGACTCTTGACGAGAGAGTGCGGGAGAAGATCGCGA
CAGCGGTTGCATTCTGTGGTGGTACGCGTTTAGAGGGAATTTAAAAGCAA
CCGTCTGACGGATGGATGGACGGACACAAGGCTCTCTCCGGTGTTCATAC
CGGGCGGAGGGGGGAGAGGCAGGGAAGGTATGCTGTCG back to topCoding sequence (CDS) from alignment at Ecto-sp6_S_contig92:83211..91598+ >mRNA_Ecto-sp6_S_contig92.18385.1 ID=mRNA_Ecto-sp6_S_contig92.18385.1|Name=mRNA_Ecto-sp6_S_contig92.18385.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1380bp|location=Sequence derived from alignment at Ecto-sp6_S_contig92:83211..91598+ (Ectocarpus species6 EcLAC_371) ATGTTTAAGAAGAAGAGCTCCAAGGAGAAAAACACTGAGGAGGAGGCGCC AACTTCTCCCAAGGGAGAGGCTGCGGCAAACTACCCCGGACTGGATGTGG GAGGCGGCACGGACCCGGCGGGCGGGAAGGGGGGAATCATCGACAAGTTC AGCACGGGGCGGCGGCGGCTGAAGGAGAACATAGCCCAGAAGACTGGGAA GGAGGCGGTGGATAACTCGGAGTTCGAGGAGCGGTCGCAGAAGGTGGCGG ACTTGAAGGAGAAGGTGGGCAAGGTGCGGGACGCGATGAAGAGGCAGCTA GACTGCTCCCGGGCGCTGTGCCTGGCGTGCGCGGACCTCGGGAACGCGTG CTCGGAGGTGGGGCTGCGAGACGTGGGGTTCCAGAACGCTCAGTTCCAGC TGGACGAGGACATGAGGAAGCAGCTGGACGCGGCCGTGGCGAAGGCGGTC GAGTCGCTGGAGAACAAGATGGCGCCCTTCGCTGAGTTGGACAAGATGAT CATGTCCCGGAACAAGCTCAAGCTCGACTACGACCACTACATGCGCAAGG TGAGAGATCTGAAAGAAAAGCCCGGCCCGGACGCGGCAAAGCTGTCCAAC AACGAGGCCAAGCTGACGGCGGCGCGGCAGCGGCTGCAGGAGGCGACGGG CAAGCTGTACAAGGGCTTCGGGTACTACGACGCCGTTGGCGGCACCCTGT GCCAGCCGGAGATTGAGATGCTCAAGCAGGCGCAGCAGGGCTTCTTCGGG TCTGCCTTTTCGGTGGTGAAAGGGGTCCCCGCGCGCGACCCGCAGGAGGT GGCGAGAGAGATCGAGTCCGTGGGAAAGGACGGCATGAACGCCCCTTTCA CCCTGCCGGCAAGCGAGTACGGATCATCGGGGGGCGGCGGGTTGTCCAAC ATGTCCGGTATGAGCGGTGCAATCAAGGACGCTTCGACGAGGGCCGGGGG CGACGACTCGCCAGACCGAAGCCCGGCCTCCGCGTACGTCCCGTCGGCGT CGGCCCCGTGGTTAACGGGCGGGTCGAGCGGGGGCGGCGGGATGGCGGGA GCCTCTTCGGGGACCGGGTCGTTCAAGGCGCCCCCAGCCGGCGGGGGCGG GAGCAGCTGGTGGGATAAGCACTCGGCGACGGCGGACACCCAACCGGCGG CGGCCGCTTCGGGGTGGGGGGCAGGGACCAAGGGACCTCCGGCGCCACCC GCGGCGGGCCAACAGCAAGCCCGAGCGCTGTTCAGTTACACCGCAGCGGA CAACACGGAGCTCTCGCTCACGGAGGGCGAGGTGCTAACGGTGGTGAGCC AGGATCAGAGCGGATGGTGGACAGGAGAAAAGGGGGGACGCAAGGGCCTC TTCCCTTCTAACTACGTGAACCTGATCTGA back to top
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