mRNA_Ecto-sp6_S_contig92.18380.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig92.18380.1 vs. uniprot
Match: D8LF93_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF93_ECTSI) HSP 1 Score: 754 bits (1947), Expect = 6.010e-259 Identity = 430/441 (97.51%), Postives = 434/441 (98.41%), Query Frame = 1
Query: 1 MDDRKALIAAVGEAAAAAAPAGEGEEGSATRYESLLVFVKRHSSRSDDLNLGEVFQTMSKKEHNRVWTQVLEAVAPIVEQGSFLSSQXXXXXXXXXXXXXXXXSTREAKREGTTPGRPSTPESAGAQTMPRRPRRGAADSGGXXXXXXXXXXXXXXXXXNNQASVSLAMEVLYAAATLAHEFLADKERVAPRALVETAVHLHDIVLSLQGLQGEALRKVIAKVCEMWWTQDRPGAEHLVVHLIPVMLVRSLGPDAKEADVKRMHGLKGALLLLDFEDESSDSLRALLLRTFMSPVYLKCSEGKRLLASFFGLHPSLVSEIHAVMKAQMPGAKKAVLAAYGEVYFRVWRGAEGQYLEKVEMLCLQDLMHACIHASTPKMHQNILIVLEGLHSQKKVKGVDADLLRLYGPVMWRSLRVANPSVRAQACQVLVDAFPLQDPSAG 1323
MDDRKALIAAVGEAAAAA PAGEGEEGSATRYESLLVFVKRHSSRSDDLNLGEVFQTMSKKEHN VWTQVLEAVAPIVEQG FLSSQXXXXXXXXXXXXXXX STREAKREGTTP RPSTPESAGAQTMPRRPRRGAADSGGXXXXXXXXXXXXXXXXXNNQASVSLAMEVLYA+ATLAHEFLADKERVAPRALV+TAV+LHDIVLSLQGLQGEALR+VIAKVCEMWWTQDRPGAEHLVVHLIPVMLVRSL PDAKEADVKRMHGLKGALLLLDFEDESSDSLRALLLRTFMSPVYLKCSEGKRLLASFFGLHPSLVSEIHAVMKAQMPGAKKAVLAAYGEVYFRVWRG EGQYLEKVEMLCLQDLMHACIHASTPKMHQNILIVLEGLHSQKKVKGVDADLLRLYGPVMWRSLRVANPSVRAQACQVLVDAFPLQDPSAG
Sbjct: 1 MDDRKALIAAVGEAAAAA-PAGEGEEGSATRYESLLVFVKRHSSRSDDLNLGEVFQTMSKKEHNWVWTQVLEAVAPIVEQGRFLSSQXXXXXXXXXXXXXXXNSTREAKREGTTPERPSTPESAGAQTMPRRPRRGAADSGGXXXXXXXXXXXXXXXXXNNQASVSLAMEVLYASATLAHEFLADKERVAPRALVDTAVYLHDIVLSLQGLQGEALRRVIAKVCEMWWTQDRPGAEHLVVHLIPVMLVRSLSPDAKEADVKRMHGLKGALLLLDFEDESSDSLRALLLRTFMSPVYLKCSEGKRLLASFFGLHPSLVSEIHAVMKAQMPGAKKAVLAAYGEVYFRVWRGTEGQYLEKVEMLCLQDLMHACIHASTPKMHQNILIVLEGLHSQKKVKGVDADLLRLYGPVMWRSLRVANPSVRAQACQVLVDAFPLQDPSAG 440
BLAST of mRNA_Ecto-sp6_S_contig92.18380.1 vs. uniprot
Match: A0A6H5JG90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG90_9PHAE) HSP 1 Score: 489 bits (1258), Expect = 2.620e-157 Identity = 246/259 (94.98%), Postives = 253/259 (97.68%), Query Frame = 1
Query: 496 SLAMEVLYAAATLAHEFLADKERVAPRALVETAVHLHDIVLSLQGLQGEALRKVIAKVCEMWWTQDRPGAEHLVVHLIPVMLVRSLGPDAKEADVKRMHGLKGALLLLDFEDESSDSLRALLLRTFMSPVYLKCSEGKRLLASFFGLHPSLVSEIHAVMKAQMPGAKKAVLAAYGEVYFRVWRGAEGQYLEKVEMLCLQDLMHACIHASTPKMHQNILIVLEGLHSQKKVKGVDADLLRLYGPVMWRSLRVANPSVRAQ 1272
S ++VLYAAATLAHEFLADKERVAPRALV+TAV+LHDIVLSLQGLQGEALR+VIAKVCEMWWTQDRPGAEHLVVHLIPVMLVRSL PDAKEADVKRMH +KGALLLLDFEDESSDSLRALLLRTFMSPVYLK SEGKRLLASFFGLHPSLVSEIHAVMKAQMPGAKKAVLAAYGEVYFRVWRGAEGQYLEKVEMLCLQDLMHACIHASTPKMHQNIL+VLEGLHSQKK KGVDADLLRLYGPVMWRSLRVANPSVRAQ
Sbjct: 38 SRQVQVLYAAATLAHEFLADKERVAPRALVDTAVYLHDIVLSLQGLQGEALRRVIAKVCEMWWTQDRPGAEHLVVHLIPVMLVRSLSPDAKEADVKRMHAVKGALLLLDFEDESSDSLRALLLRTFMSPVYLKSSEGKRLLASFFGLHPSLVSEIHAVMKAQMPGAKKAVLAAYGEVYFRVWRGAEGQYLEKVEMLCLQDLMHACIHASTPKMHQNILVVLEGLHSQKKAKGVDADLLRLYGPVMWRSLRVANPSVRAQ 296
BLAST of mRNA_Ecto-sp6_S_contig92.18380.1 vs. uniprot
Match: A0A835YRM8_9STRA (Condensin II non structural maintenance of chromosomes subunit-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRM8_9STRA) HSP 1 Score: 310 bits (794), Expect = 1.190e-90 Identity = 177/416 (42.55%), Postives = 236/416 (56.73%), Query Frame = 1
Query: 103 LLVFVKRHSSRSDDLNLGEVFQTMSKKEHNRVWTQVLEAVAPIVEQGSFLSSQXXXXXXXXXXXXXXXXSTREAKREGTTPGRPSTPESAGAQTMPRRPRRGAADSGGXXXXXXXXXXXXXXXXXNNQASVSLAMEVLYAAATLAHEFLADKERVAPRALVETAVHLHDIVLSLQGLQGEALRKVIAKVCEMWWTQDRPGAEHLVVHLIPVMLVRSLGPDAKEADVKRMHGLKGALLLLDFEDESSDSLRALLLRTFMSPVYLKCSEGKRLLASFFGLHPSLVSEIHAVMKAQMPGAKKAVLAAYGEVYFRVWRGAEGQ------------YLEKVEMLCLQDLMHACIHASTPKMHQNILIVLEGLHSQKKVKGVDADLLRLYGPVMWRSLRVANPSVRAQACQVLVDAFPLQDP 1314
LL +KRH +RSD+ +L EV Q + +KEH R W L V PI E +L E + G+ G ++ A GA D A VS+++E++ A TLA FLADK+R AP +L+ T LH I+L LQG +G AL+ IA+ CE WW +RPG EHLV L+P +L+R+L P A++ADV+R+ +GALLLLD+ED ++ RALLLR F++P +L+ G+R LAS FGLHP+ + IHAV+ AQ+P A++AVLAAYGEVYFR WRGA+G Y ++E C+Q LM VL+ H+Q++ KGVDA LLRLY P++WR+LRVANP VRAQA +L AFPLQDP
Sbjct: 34 LLALLKRHRARSDEYDLDEVIQALPRKEHERFWAAALALVTPITEGHLYLIDD------------------EEDEXXGSEEGTADEEDAPAAH--------GAVDK---------------------DAVVSISLELMDAITTLAGLFLADKKRAAPPSLLSTMAALHGILLYLQGAEGAALQTAIARACEAWWRAERPGGEHLVACLLPYLLLRALDPAARDADVRRLCDARGALLLLDWEDADAEGTRALLLRAFLAPAFLRGDAGRRFLASVFGLHPAFAARIHAVVSAQLPRARRAVLAAYGEVYFRAWRGADGXXXXXXXXXXXXXYAAEIEGACMQPLMXXXXXXXXXXXXXXARGVLDAFHAQRRQKGVDAALLRLYDPILWRALRVANPVVRAQAAALLARAFPLQDP 402
BLAST of mRNA_Ecto-sp6_S_contig92.18380.1 vs. uniprot
Match: W7TM42_9STRA (Condensin-2 complex subunit g2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TM42_9STRA) HSP 1 Score: 297 bits (761), Expect = 2.350e-86 Identity = 160/409 (39.12%), Postives = 235/409 (57.46%), Query Frame = 1
Query: 103 LLVFVKRHSSRSDDLNLGEVFQTMSKKEHNRVWTQVLEAVAPIVEQGSFLSSQXXXXXXXXXXXXXXXXSTREAKREGTTPGRPSTPESAGAQTMPRRPRRGAADSGGXXXXXXXXXXXXXXXXXNNQASVSLAMEVLYAA--ATLAHEFLADKERVAPRALVETAVHLHDIVLSLQGLQGEALRKVIAKVCEMWWTQDRPGAEHLVVHLIPVMLVRSLGPDAKEADVKRMHGLKGALLLLDFEDESSDSLRALLLRTFMSPVYLKCSEGKRLLASFFGLHPSLVSEIHAVMKAQMPGAKKAVLAAYGEVYFRVWRGAEGQYLEKVEMLCLQDLMHACIHASTPKMHQNILIVLEGLHSQKKVKGVDADLLRLYGPVMWRSLRVANPSVRAQACQVLVDAFPLQDPSAG 1323
LL V R+++++DD L + QTM+ K+ +++W ++ + P +E +R+G G + + P+ G A V+ A L A+ + + + P L++ V LHD++ L G+ GEAL+ I +VCE WW Q R GAE LV +P ++ RSL DA+EA VKR++ L+GALLLLD+E+E++ R LLL+ F+ P YLK ++G+RLL FGLHPSLV +IH +K+Q+P AKK ++ AYG+VYFR WR AEG YLE +E C+QDLMHA +H ++P ++ + ++L+ H+ K+++ VDA LLRLY P++WRSLRVA+P+VRAQA +LVDAFPLQDP G
Sbjct: 25 LLNLVARNAAKNDDFALEDFLQTMTAKDQSKLWEEIASRLNPTIE-------------------LVAADGQEGEERDGD----------GGQEFVDTCPKVGKDQEEAWRAFRLL------------SAVVATAQATLQVCPPASASTSTSSSADSATPEGLLQVMVALHDVLFQLSGIDGEALQGAIVRVCEQWWKQGRGGAEFLVAQTVPYLVARSLEEDAREALVKRVYALRGALLLLDYEEEATGPFRELLLQCFLKPTYLKSADGRRLLTFLFGLHPSLVVDIHETVKSQLPYAKKKLVQAYGDVYFRAWRAAEGPYLEAIETGCVQDLMHAAVHCASPSLYATLRLLLQSFHANKRLREVDAMLLRLYDPILWRSLRVASPTVRAQATSLLVDAFPLQDPDMG 392
BLAST of mRNA_Ecto-sp6_S_contig92.18380.1 vs. uniprot
Match: L8GEA4_ACACA (HEAT repeat domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GEA4_ACACA) HSP 1 Score: 266 bits (681), Expect = 1.300e-75 Identity = 162/414 (39.13%), Postives = 235/414 (56.76%), Query Frame = 1
Query: 97 ESLLVFVKRHSSRSDDLNLGEVFQTMSKKEHNRVWTQVLEAVAPIVEQGSFLSSQXXXXXXXXXXXXXXXXSTREAKREGTTPGRPSTPESAGAQTMPRRPRRGAADSGGXXXXXXXXXXXXXXXXXNNQASVSLAMEVLYAAATLAHEFLADKERVAPRALVETAVHLHDIVLSLQGLQGEA----LRKVIAKVCEMWWTQDRPGAEHLVVHLIPVMLVRSLGPDAKEADVKRMHGLKGALLLLDFEDESSDSLRALLLRTFMSPVYLKCSEGKRLLASFFGLHPSLVSEIHAVMKAQMPGAKKAVLAAYGEVYFRVWRGAEGQYLEKVEMLCLQDLMHACIHASTPKMHQNILIVLEGLHSQKKVKGVDADLLRLYGPVMWRSLRVANPSVRAQACQVLVDAFPLQDPSAGK 1326
E L+ VKRH +R D+ +L E+ +T +K + ++W+ + V+ IVE +F + + AKR GRP + XXXXXXXXXX ++ + + A+E L A A LA F+A K+R+AP +L ++ LH I+L + ++G L IA++CE WW QDR E LV I +++++L AK A +KR++ + ALLLLDF+D+SS L+ LLLR F+ P++L+ ++GK+ L FGLHP + IH +K Q+P K++L AYGEVYF+ W+ A+G YL K+E CLQDL+ +H + + VL +H QKK KGVD LLRLY P++WRSL+VANP VR A +L DAFPLQDP + +
Sbjct: 19 EELVALVKRHRARGDNYDLKEIVETFPRKHYEQLWSALHVHVSAIVEGSTFTKPEANDEQQPQQAKKSNAKAKPAAKRGR---GRPKKNDEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRAKKGSEDKTAET-ALEYLRAVALLASLFIASKDRIAPDSLFDSVALLHGILLDVLAIKGAGHALLLHNEIAQLCETWWKQDRTQKEALVPLTIFYLVLQTLEEGAKTATIKRLYDFRSALLLLDFQDDSSTQLKGLLLRCFIHPMFLRAADGKKFLVYLFGLHPPYIDAIHDTIKGQLPACPKSLLEAYGEVYFKAWKVAQGPYLLKLEYTCLQDLISCAVHVQNEAVVSGLRKVLRHIHEQKKQKGVDEMLLRLYEPIIWRSLKVANPMVRRNATVLLADAFPLQDPDSAQ 428
BLAST of mRNA_Ecto-sp6_S_contig92.18380.1 vs. uniprot
Match: A0A7S1CM40_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CM40_9STRA) HSP 1 Score: 233 bits (594), Expect = 3.050e-68 Identity = 117/242 (48.35%), Postives = 158/242 (65.29%), Query Frame = 1
Query: 601 LHDIVLSLQGLQGEALRKVIAKVCEMWWTQDRPGAEHLVVHLIPVMLVRSLGPDAKEADVKRMHGLKGALLLLDFEDESSDSLRALLLRTFMSPVYLKCSEGKRLLASFFGLHPSLVSEIHAVMKAQMPGAKKAVLAAYGEVYFRVWRGAEGQYLEKVEMLCLQDLMHACIHASTPKMHQNILIVLEGLHSQKKVKGVDADLLRLYGPVMWRSLRVANPSVRAQACQVLVDAFPLQDPSAGK 1326
+H+++ L + A + I K CE WWTQ R G E LVV L+P +L+RSL A DVKR++ ++ A LLDFEDES DSL+ LLLR + P+Y+ ++G+R LA F LHP+ V ++H +K QMP ++ V AAYGEVYF+ WR +EG+ K+E C+QDLMH +HAS P M VL ++K+ +GVD L RLY P++WRSL ANP+VR A LVDAFPLQ+P A +
Sbjct: 3 MHNVLFYLMVREAAACQMSIMKACERWWTQARAGREGLVVQLLPTLLMRSLEEGAAPGDVKRVYAVRSAFELLDFEDESIDSLKELLLRCVIHPLYVSRADGRRFLAFLFSLHPTFVDDLHDTIKNQMPSTRR-VHAAYGEVYFKAWRNSEGELTLKIERGCVQDLMHRGVHASLPAMFAATRQVLAAFINEKRSRGVDEMLDRLYEPILWRSLAAANPTVRRNAATALVDAFPLQNPEAAR 243
BLAST of mRNA_Ecto-sp6_S_contig92.18380.1 vs. uniprot
Match: A0A3M6U8W1_POCDA (Uncharacterized protein n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6U8W1_POCDA) HSP 1 Score: 220 bits (561), Expect = 3.730e-65 Identity = 112/232 (48.28%), Postives = 152/232 (65.52%), Query Frame = 1
Query: 637 GEALRKVIAKVCEMWWTQDRPGAEHLVVHLIPVMLVRSLGPDAKEADVKRMHGLKGALLLLDFEDESSDSLRALLLRTFMSPVYLKCSEGKRLLASFFGLHPSLVSEIHAVMKAQMPGAKKAVLAAYGEVYFRVWRGAEGQYLEKVEMLCLQDLMHACIHAS---TPKMHQNILIVLEGLHSQKKVKGVDADLLRLYGPVMWRSLRVANPSVRAQACQVLVDAFPLQDPSAG 1323
E+L+ IA++CE+W+ + G E L+ P +++RSLG +DVKR+ GL+ LLL+DF+D+SS+SL+ LL + + P YLK EG+R L+ FGL+P L E H +K Q+P VL+ YGEVYFR WR A G YL+ +E C+QDLM A +HA T M + VLE +H QKK +GVD LLRLY P++WR+ +VANP VRA A +L D FPLQ+P AG
Sbjct: 7 SESLQNDIAQLCELWFLNELEGKEELITQTFPYLIIRSLGRGLV-SDVKRVWGLRQCLLLMDFDDDSSESLKQLLHQCMIHPTYLKLEEGRRFLSYSFGLNPGLAKEFHKTIKNQIPYCTMNVLSLYGEVYFRAWRVASGAYLKVLEENCIQDLMFAAVHAQRTGTKSMASRLRKVLEYIHQQKKQRGVDEALLRLYQPIIWRAFKVANPMVRANAAALLTDIFPLQNPDAG 237
BLAST of mRNA_Ecto-sp6_S_contig92.18380.1 vs. uniprot
Match: UPI000F554239 (condensin-2 complex subunit G2-like n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=UPI000F554239) HSP 1 Score: 234 bits (598), Expect = 1.620e-64 Identity = 143/413 (34.62%), Postives = 214/413 (51.82%), Query Frame = 1
Query: 97 ESLLVFVKRHSSRSDDLNLGEVFQTMSKKEHNRVWTQVLEAVAPIVEQGSFLSSQXXXXXXXXXXXXXXXXSTREAKREGTTPGRPSTPESAGAQTMPRRPRRGAADSGGXXXXXXXXXXXXXXXXXNNQASVSLAMEVLYAAATLAHEFLADKERVAPRALVETAVHLHDIVLSL-QGLQGEALRKVIAKVCEMWWTQDRPGAEHLVVHLIPVMLVRSLGPDAKEADVKRMHGLKGALLLLDFEDESSDSLRALLLRTFMSPVYLKCSEGKRLLASFFGLHPSLVSEIHAVMKAQMPGAKKAVLAAYGEVYFRVWRGAEGQYLEKVEMLCLQDLMHACIHAS---TPKMHQNILIVLEGLHSQKKVKGVDADLLRLYGPVMWRSLRVANPSVRAQACQVLVDAFPLQDPSAG 1323
++ L F+++H+S++D N+ E QT+ KK+H R+W+ + + ++ S + +++ EG + +V L V+ + +K P A +ETA LH +++SL +G E+L+ IA++CE+W+ + G E L+ P +++RSLG +DVKR+ GL+ LLL+DF+D+SS+SL+ LL + + P YLK EG+R L+ FGL+P L E H +K Q+P VL+ YGEVYFR WR A G YL+ +E C+QDLM A +HA T M + VLE +H QKK +GVD LLRLY P++WR+ +VANP VRA A +L D FPLQ+P AG
Sbjct: 18 QAFLRFIEQHNSKNDSFNIEEALQTLPKKDHERLWSGLRDMTRRLLLTNPVGSREND-----------------DSEEEGPS------------------------------------EWPALLSYLEGVTTVGLCALVV----------MPEKPTHVPSAFLETAAILHGLLMSLPEG--SESLQNDIAQLCELWFLNELEGKEELITQTFPYLIIRSLGRGLV-SDVKRVWGLRQCLLLMDFDDDSSESLKQLLHQCMIHPTYLKLEEGRRFLSYSFGLNPGLAKEFHKTIKNQIPYCTMNVLSLYGEVYFRAWRVASGAYLKVLEENCIQDLMFAAVHAQRTGTKSMASRLRKVLEYIHQQKKQRGVDEALLRLYQPIIWRAFKVANPMVRANAAALLTDIFPLQNPDAG 364
BLAST of mRNA_Ecto-sp6_S_contig92.18380.1 vs. uniprot
Match: B3RMC3_TRIAD (Uncharacterized protein n=2 Tax=Trichoplax TaxID=10227 RepID=B3RMC3_TRIAD) HSP 1 Score: 234 bits (596), Expect = 3.170e-64 Identity = 117/256 (45.70%), Postives = 167/256 (65.23%), Query Frame = 1
Query: 553 DKERVAPRALVETAVHLHDIVLSLQGLQGEALRKVIAKVCEMWWTQDRPGAEHLVVHLIPVMLVRSLGPDAKEADVKRMHGLKGALLLLDFEDESSDSLRALLLRTFMSPVYLKCSEGKRLLASFFGLHPSLVSEIHAVMKAQMPGAKKAVLAAYGEVYFRVWRGAEGQYLEKVEMLCLQDLMHACIHA--STPKMHQNILIVLEGLHSQKKVKGVDADLLRLYGPVMWRSLRVANPSVRAQACQVLVDAFPLQDP 1314
DK+ + P +L E A LH I++SL L+ I+++CE+WW++D E L+ H++P +L+R L PDA D+KR+ ++ LLLLD++D S+DS + LLLR +M P++LK EG+R+L FGLH L+ +IHA +K +P + +++ YGEVYFR WR + G Y EK+E C+QDLMH IHA S P + + +L+ H +KK GVD LL LY P++WRSL+VAN VRA A +L AFPL DP
Sbjct: 107 DKDGIEP-SLHEIASILHGILMSLPEA-AITLQDSISRICELWWSKDFSAKEELIPHMVPYLLMRCLQPDAVLKDIKRLWQIRNCLLLLDYDDPSADSTKLLLLRCYMQPLFLKTDEGRRILTYTFGLHVPLIEDIHATIKNNIPSSSRSLQEYYGEVYFRAWRSSSGPYREKIENFCIQDLMHHAIHARISRPSIAAALKRILDQFHREKKQSGVDKMLLTLYQPIIWRSLKVANAIVRANAAALLFSAFPLHDP 360
BLAST of mRNA_Ecto-sp6_S_contig92.18380.1 vs. uniprot
Match: R1EH25_EMIHU (Putative condensin n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1EH25_EMIHU) HSP 1 Score: 225 bits (574), Expect = 3.270e-64 Identity = 114/266 (42.86%), Postives = 162/266 (60.90%), Query Frame = 1
Query: 571 PRALVETAVHLHDIVLSLQGLQGEALRKVIAKVCEMWWTQDRPGAEHLVVHLIPVMLVRSLGPDAKEADVKRMHGLKGALLLLDFEDESSDSLRALLLRTFMSPVYLKCSEGKRLLASFFGLHPSLVSEIHAVMKAQMPGAKKAVLAAYGEVYFRVWRGAEGQ-----------------YLEKVEMLCLQDLMHACIHASTPKMHQNILIVLEGLHSQKKVKGVDADLLRLYGPVMWRSLRVANPSVRAQACQVLVDAFPLQDPS 1317
P L A LHDI+ L + L+ I ++CE WW +RPG + LV I +LV +L A ADVKR+ L+ AL +LD+ D S +L+ LLL + P+ L+C+EG++LL FGLHP ++E+H +KAQ+P +K++ YGE+YFR WR A G YLE++E CLQDLM +HA++ M + VL H+QK+ +GVD+ LLRLY P++WR+L+VANP VR A +L++AFPLQDP+
Sbjct: 100 PEKLQAVAEALHDIIFDLHDPRASTLQGAIVELCESWWLAERPGRDELVPQTISYLLVSALHEAATAADVKRLWALRSALGVLDYADPSVAALKRLLLHCMIKPLVLRCAEGRKLLVYLFGLHPPFIAELHRAIKAQIPVCRKSLRDLYGEIYFRAWRAASGASSXXXSGGARGGSSVCAYLERLEEGCLQDLMFHAVHAASANMATALRQVLAYTHAQKRQRGVDSMLLRLYEPILWRALKVANPHVRRNAATLLIEAFPLQDPT 365 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig92.18380.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig92.18380.1 >prot_Ecto-sp6_S_contig92.18380.1 ID=prot_Ecto-sp6_S_contig92.18380.1|Name=mRNA_Ecto-sp6_S_contig92.18380.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=442bp MDDRKALIAAVGEAAAAAAPAGEGEEGSATRYESLLVFVKRHSSRSDDLNback to top mRNA from alignment at Ecto-sp6_S_contig92:41129..47926- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig92.18380.1 ID=mRNA_Ecto-sp6_S_contig92.18380.1|Name=mRNA_Ecto-sp6_S_contig92.18380.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=6798bp|location=Sequence derived from alignment at Ecto-sp6_S_contig92:41129..47926- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig92:41129..47926- >mRNA_Ecto-sp6_S_contig92.18380.1 ID=mRNA_Ecto-sp6_S_contig92.18380.1|Name=mRNA_Ecto-sp6_S_contig92.18380.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1326bp|location=Sequence derived from alignment at Ecto-sp6_S_contig92:41129..47926- (Ectocarpus species6 EcLAC_371)back to top |