mRNA_Ecto-sp6_S_contig92.18379.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig92.18379.1 vs. uniprot
Match: D8LF93_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF93_ECTSI) HSP 1 Score: 1514 bits (3919), Expect = 0.000e+0 Identity = 947/1061 (89.26%), Postives = 952/1061 (89.73%), Query Frame = 3
Query: 3 AASYDATLQQQFVALTDLLEDAHPQVRAVAGKGACRVLSVFWEMVPLDTTRALLTRVVGRLASDGSSPAVRLAAVEGLSVLLECPASHAVLKSMLPGVQNLIHDTNKKVRTAFVKLLLVVKGVKSIKYYQVATVDHILARLSEDDAKCPASASGLSKLILNSYFPTGSGVTGSFQVSRCLTLLSQDEGAAVAFFSRLHQNAGVPSSAKMIAMLVRCILVVARAXXXXXXXXXXXXXXXXX-KVDRKGKRXXXXXXXGQRGAKGGNKTGLTLKASDSKTMSGILNLIASIWESILPALEKTINEPSLDLIQQTVTAGEALSILYRRFSGQDECRAAFMRVAGLAGGDLAPGMLEDVVVEMLALPADAPPSAYGPTVDLLCSWGQHEHLVGAVVESLRKALSVPVKTTXXXXXXXXXXXXXXXXXXXXXXXRGKRXXPASRKEGXXXXXXXXXXXXXXTCIPAPLALNMLGHLLAGGEGHPSTGAARDAIMASDEAVGSLEAVLVLARSAATTRLSSXXXXXXXXXXXXXXXXXXXX---REDEERVSLRRHCPDALLVRALEALGRVYMHREAAVVGDNSSGNPPAAVADEGSAVAGEDVSMLLQPMPFSVKMRELMVWATNTVLPVLVGXXXXXXXXVDMVEEGGTPVKPGSARLVAESPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVRALAGGVFGVVVLLASEWVEVGSGLAEISMRADTWGNRLLASLLQEDDGHEGPEQPSGVNAVLPQLCRLGLHLSAREAQGARPPASIWDVLMRCADRRVSMSEEALFVREEERSKATCVQSFLAASVALEGRKDGMSSLVERLMAFMFTQAFISDEDDEQGGAEEITDKGPSIDGLTRLEVRAMQDAESDEPPGCLLLQLSRPAAAVLESVLRSSPASKAAGALVLSHLAAFGDASGEGEDASWPLFCAHILVALIENAPAKTRLQLAADAHAGLRSAAASTSTLSSSFSFSEGNKSGAVVSPAGADAPEEEEGVSTRKAAAFAVGAIYGRLEAARRAAVTGVEGEAQGVSVVGAAAAVAVSA 3173
AASYDATLQQQFVALTDLLEDAHPQVRAVAGKGACRVLSVFWEMVPLDTTRALLTRVVGRLASDGSSPAVRLAAVEGLSVLLECPASHAVLKSMLPGVQNLIHDTNKKVRTAFVKLLLVVKGVKSIKYYQVATVDHILARLSEDDAKCPASASGLSKLILNSYFPTGSGVTGSFQVSRCLTLLSQDEGAAVAFFSRLHQNAGVPSSAKMIAMLVRCILVVARAXXXXXXXXXXXXXXXXX KVDRKGKRXXXXXX GQRGAKGGNKTGLTLKASDSKTMSGILNLIASIWESILPALEKTINEPSLDLIQQTVT GEALSILYRRFSGQDECRAAFMRVAGLAGGDLAPGMLEDVVVEMLALPADAPPSAYGPTVDLLCSWGQHEHLVGAVVESLRKA SVPVKTT RGKR XPASRKEG XXXXXXXXXXXX TCIPAPLALNMLGHLLAGGEGHPSTGAARDAIMASDEAVGSLEAVLVLARSAATTRLSSXXXXXXXXXXXXXXXXXXXX REDEERVSLRR CPDALLVRALEALGRVYMHREAAVVGD+S GNPP A ADEGSA AGEDVSMLLQPMPFSVKMRELMVWATNTVLPVLVGXXXXXXXXV+MVEEGGTPVKPGSARLVAESP XXXXXXXXXXXX AVRALAGGVFGVVVLLASEWVEVGSGLAEISMRADTWGNRLLASLLQ VLMRCADRRVSMSEEALFV EEERSKATCVQSFLAASVALEGRKDGMSSLVERLMAFMFTQAFISDEDDEQGGAEEITDKGPSIDGLTRLEVRAMQDAESDEPPGCLLLQLSRPAAAVLESVLRSSPASKAAGALVLSHLAAFGDASG GEDASWPLFCAH+LVALIENAPAKTRLQLAADAHAGLRSAAASTSTLSS FSFSEGNKSGAVVSPAGADAPEEEEGVSTRKAAAFAVGAIYGRLEAARRAAVTGVEGEAQGV++VGAAAAVAVSA
Sbjct: 441 AASYDATLQQQFVALTDLLEDAHPQVRAVAGKGACRVLSVFWEMVPLDTTRALLTRVVGRLASDGSSPAVRLAAVEGLSVLLECPASHAVLKSMLPGVQNLIHDTNKKVRTAFVKLLLVVKGVKSIKYYQVATVDHILARLSEDDAKCPASASGLSKLILNSYFPTGSGVTGSFQVSRCLTLLSQDEGAAVAFFSRLHQNAGVPSSAKMIAMLVRCILVVARAXXXXXXXXXXXXXXXXXXKVDRKGKRXXXXXXGGQRGAKGGNKTGLTLKASDSKTMSGILNLIASIWESILPALEKTINEPSLDLIQQTVT-GEALSILYRRFSGQDECRAAFMRVAGLAGGDLAPGMLEDVVVEMLALPADAPPSAYGPTVDLLCSWGQHEHLVGAVVESLRKAFSVPVKTTTATATDEEAGSGEIADGKGKSS-RGKRRXPASRKEGNXXXXXXXXXXXX-TCIPAPLALNMLGHLLAGGEGHPSTGAARDAIMASDEAVGSLEAVLVLARSAATTRLSSXXXXXXXXXXXXXXXXXXXXXXXREDEERVSLRRRCPDALLVRALEALGRVYMHREAAVVGDDS-GNPPTAAADEGSAAAGEDVSMLLQPMPFSVKMRELMVWATNTVLPVLVGXXXXXXXXVEMVEEGGTPVKPGSARLVAESPSXXXXXXXXXXXXLDNDGGDASSAA-----------AVRALAGGVFGVVVLLASEWVEVGSGLAEISMRADTWGNRLLASLLQ--------------------------------------------VLMRCADRRVSMSEEALFVGEEERSKATCVQSFLAASVALEGRKDGMSSLVERLMAFMFTQAFISDEDDEQGGAEEITDKGPSIDGLTRLEVRAMQDAESDEPPGCLLLQLSRPAAAVLESVLRSSPASKAAGALVLSHLAAFGDASGAGEDASWPLFCAHVLVALIENAPAKTRLQLAADAHAGLRSAAASTSTLSSPFSFSEGNKSGAVVSPAGADAPEEEEGVSTRKAAAFAVGAIYGRLEAARRAAVTGVEGEAQGVAMVGAAAAVAVSA 1442
BLAST of mRNA_Ecto-sp6_S_contig92.18379.1 vs. uniprot
Match: A0A6H5JG90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG90_9PHAE) HSP 1 Score: 1391 bits (3601), Expect = 0.000e+0 Identity = 865/1145 (75.55%), Postives = 884/1145 (77.21%), Query Frame = 3
Query: 3 AASYDATLQQQFVALTDLLEDAHPQVRAVAGKGACRVLSVFWEMVPLDTTRALLTRVVGRLASDGSSPAVRLAAVEGLSVLLECPASHAVLKSMLP-------GVQNLIHDTNKKVRTAFVKLLLVVKGVKSIKYYQVATVDHILARLSEDDAKCPASASGLSKLILNSYFPTGSGVTGSFQVSRCLTLLSQDEGAAVAFFSRLHQNAGVPSSAKMIAMLVRCILVVARAXXXXXXXXXXXXXXXXXKVDRKGKRXXXXXXXGQRGAKGGNKTGLTLKASDSKTMSGILNLIASIWESILPALEKTINEPSLDLIQQTVTAGEALSILYRRFSGQDECRAAFMRVAGLAGGDLAPGMLEDVVVEMLALPADAPPSAYGPTVDLLCSWGQHEHLVGAVVESLRKALSVPVKTTXXXXXXXXXXXXXXXXXXXXXXXRGKRXXPASRKEGXXXXXXXXXXXXXXTCIPAPLALNMLGHLLAGGEGHPSTGAARDAIMASDEAVGSLEAVLVLARSAATTRLSSXXXXXXXXXXXXXXXXXXXXREDEERVSLRRHCPDALLVRALEALGRVYMHREAAVVGDNSSGNPPAAVADEGSAVAGEDVSMLLQPMPFSVKMRELMVWATNTVLPVLVGXXXXXXXXVDMVEEGGTPVKPGSARLVAESPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVRALAGGVFGVVVLLASEWVEVGSGLAEISMRADTWGNRLLASLLQ----------------------------------------------------EDDGHEGPEQPSGVNAVLPQLCRLGLHLSAREAQGARPPASIWD--------------------VLMRCADRRVSMSEEALFVREEERSKATCVQSFLAASVALEGRKDGMSSLVERLMAFMFTQAFISDEDDEQGGAEEITDKGPSIDGLTRLEVRAMQDAESDEPPGCLLLQLSRPAAAVLESVLRSSPASKAAGALVLSHLAAFGDASGEG---------EDASWPLFCAHILVALIENAPAKTRLQLAADAHAGLRSAAASTSTLSSSFSFSEGNKSGAVVSPAGADAPEEEEGVSTRKAAAFAVGAIYGRLEAARRAAVTGVEGEAQGVSVVGAAAAVAVSA 3173
AA+YDATLQQQFVALTDLLEDAHPQVRAVAGKGACRVLSVFWEMVPLDTTRALLTRVVGRLASDGSSPAVRLAAVEGLSVLLECPASHAVLKSMLP GVQNLIHDTNKKVRTAFVKLLLVVKGVKSIKYYQVATVDHILARLSED AKCPASASGLSKLILNSYFPTGSGVTGSFQVSRCLTLLSQDEGAAVAFFSRLHQNAGVPSSAKMIAMLVRCILV ARA XXXXXXXXXXX VDR+GKR G GAKGGNK LTLKASDSKTMSGILNLIASIWESILPALEKTINEPSLDLIQQTVT GEALSILYRRF GQDECRAAFMR+AGLAGGDLAPGMLEDVVVEMLALPADAPPSAYGPTVDLLCSWGQHEHLVGAVVESLRK S P TT A E CIPAPLALNMLGHLLAGGEGHPSTGAARDAIMASDEAVGSLEAVLVLARSA T XXXXXXXXXXXXXXXXXXXX +VSLRR CPDALLVRALEALGRVYMHREAAVVGD+SSGN PAAVADEGSA AG+D+SMLLQPMPFSVKMRELMVWATNTVLPVLVGXXXXXX VDMVEEGGTP G+A AVRALAGGVFGVVVLLASEWVEVGSGLAEISMRADTWGNRLLASLLQ E DGHEG PSGVNAVLPQLCRLGLHLSAREAQGARPPASIWD VLMRCADRRVSMSEEALFV EEER KATCVQSFLAASVALEGRKDGMSSLVERLMAFMFTQAFISDE++EQ E DKGPSIDGLTRLE+RA+QD +SDEPPGCLLLQLSRPAAAVLESVLRSSPASKAAG+LVLSHLAAFGDASG EDASWPLFCAH+LVALIENAPAKTRLQLAA+AHAGLR+ G+KSGA VSPA ADAPEEEEGVSTRKAAAFAVGAIYGRLEAARRAAVTGV GEAQGV+V GAAAAVAVSA
Sbjct: 305 AAAYDATLQQQFVALTDLLEDAHPQVRAVAGKGACRVLSVFWEMVPLDTTRALLTRVVGRLASDGSSPAVRLAAVEGLSVLLECPASHAVLKSMLPVSVSEEGGVQNLIHDTNKKVRTAFVKLLLVVKGVKSIKYYQVATVDHILARLSEDHAKCPASASGLSKLILNSYFPTGSGVTGSFQVSRCLTLLSQDEGAAVAFFSRLHQNAGVPSSAKMIAMLVRCILVAARAPAVADNXXXXXXXXXXX-VDRRGKRKGVEEGGGHCGAKGGNKARLTLKASDSKTMSGILNLIASIWESILPALEKTINEPSLDLIQQTVT-GEALSILYRRFCGQDECRAAFMRLAGLAGGDLAPGMLEDVVVEMLALPADAPPSAYGPTVDLLCSWGQHEHLVGAVVESLRKFFSAPRITTTTAVDE------------------------AGSGEMDDGDHDEGGRGGGGMCIPAPLALNMLGHLLAGGEGHPSTGAARDAIMASDEAVGSLEAVLVLARSA-TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVSLRRRCPDALLVRALEALGRVYMHREAAVVGDSSSGNLPAAVADEGSAAAGDDMSMLLQPMPFSVKMRELMVWATNTVLPVLVGXXXXXXPAVDMVEEGGTP---GAA-------------------------------------------AVRALAGGVFGVVVLLASEWVEVGSGLAEISMRADTWGNRLLASLLQGVRAIGCAIDRGSDSVTSGCCPVGPVERKYEQLPPPPPDHIHDPMMHVVASQEGDGHEGQGHPSGVNAVLPQLCRLGLHLSAREAQGARPPASIWDETCLDAELCLPCPAHPEHLKVLMRCADRRVSMSEEALFVGEEERGKATCVQSFLAASVALEGRKDGMSSLVERLMAFMFTQAFISDEEEEQDLRER--DKGPSIDGLTRLEIRAVQDLDSDEPPGCLLLQLSRPAAAVLESVLRSSPASKAAGSLVLSHLAAFGDASGRETVASQVASWEDASWPLFCAHVLVALIENAPAKTRLQLAAEAHAGLRAXXXXXXXXXXXXXXXXGDKSGAAVSPARADAPEEEEGVSTRKAAAFAVGAIYGRLEAARRAAVTGVGGEAQGVAVEGAAAAVAVSA 1374
BLAST of mRNA_Ecto-sp6_S_contig92.18379.1 vs. uniprot
Match: A0A835YRM8_9STRA (Condensin II non structural maintenance of chromosomes subunit-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRM8_9STRA) HSP 1 Score: 246 bits (629), Expect = 7.020e-63 Identity = 292/1047 (27.89%), Postives = 415/1047 (39.64%), Query Frame = 3
Query: 72 PQVRAVAGKGACRVLSVFWEMVPLDTTRALLTRVVGRLASDGSSPA-----------------------VRLAAVEGLSVLLECPASHA------------------------------VLKSMLPGVQNLIHDTNKKVRTAFVKLLLVVKGVKSIKYYQVATVDHILARLSEDDAKCPASASGLSKLILNSYFPTGSGVTGSFQVSRCLTLLSQDEGAAVAFFSRLHQNAGVPSSAKMIAMLVRCILVVARAXXXXXXXXXXXXXXXXXKVDRKGKRXXXXXXXGQRGAKGG-----------------------------------NKTGLTLKAS----DSKTMSGILNLIASIWESILPALEKT-INEPSLDLIQQTVTAGEALSILYRRFSGQDECRAAFMRVAGLAGGDLAPGMLEDVVVEMLALPADAPPSAYGPTVDLLCSWGQHEHLVGAVVESLRKALSVPVKTTXXXXXXXXXXXXXXXXXXXXXXXRGKRXXPASRKEGXXXXXXXXXXXXXXTCIPAPLALNMLGHLLAGGEGHPSTGAARDAIMASDEAVGSLEAVLVLARSAATTRLSSXXXXXXXXXXXXXXXXXXXXREDEERVSLRRHCPDALLVRALEALGRVYMHREAAVVGDNSSGNPPAAVADEGSAVAGEDVSMLLQPMPFSVKMRELMVWATNTVLPVLVGXXXXXXXXVDMVEEGGTPVKPGSARLVAESPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVRALAGGVFGVVVLLASEWVEVGSGLAEISMRADTWGNRLLASL---------------------LQEDDGHEGPEQPSGVNAVLPQLCRLGLHLSAREAQGARPPASIWDVLMRCADRRVSMSEEALFVREEERSKATCVQSFLAASVALEGRKDGMSSLVERLMAFMFTQAFISDEDDEQGGAEEITDKGPSIDGLTRLEVRAMQDAESDEPP--GCLLLQLSRPAAAVLESVLRSSPASKAAGALVLSHLAAFGDASGEGEDASWPLFCAHILVALIENAP 2864
P+VRA A + C V+ +WE +P+ TTRALLTRV+ VR+AA+EGL+ LL+C SH+ LK++LP ++N +HD N + R AFV LLL V+ V++I++Y VA VD +LA+L DD P A L++L+ NSY+P G+GVTG QV R LT++ Q+ GAA AF L + G + KM ML + + V A A ++++G G +G G ++ A D+ + +L L +WESI L +P +L+ TV G AL++L R G + RAA +R+AGL G P +LE +V ++L+L DAP + +GP +D LC+WG+ HLV ++ +L L K G XXXXXXXX +P LAL LG +L+GG G + AARD ++ ++ L A L A +AA R++ XXXXXXXXXXXXXXXXXX PD L+V ALEALGR+++H A A A P+ + REL +WAT ++P A A +V LA+EWV +GSGLAEI +RA +WG LLA L + ++P LCRL L EAQGA P ++W ++ A S V LA + L R++ +LV R++ F+ A ++ TD P+ LT + RA A + G L+ AAA L +L+S+P ++A A A G AS H+L A++ +AP
Sbjct: 473 PRVRAAAARAVCAVVGDWWEAIPMATTRALLTRVIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRIAALEGLTALLDCALSHSFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALKALLPALRNTLHDANPRARRAFVALLLRVRSVRAIRFYHVAPVDALLAQLEVDDGDAPPVARALAELLANSYYPQGAGVTGEEQVGRMLTMVQQNYGAARAFCRHLRAHVGAGAVTKMAVMLFKAVQVAAAAALSKGESKAAALRNGESALNKRG---------GAKGVGGAXXXXXXXXXXRKRTAXXXXXXXXXXXXXXXXXXXSDRENAVAAAPTVNIDTALSARLLTLCVDLWESIGSDLSTNPALQPCQELLSATVD-GRALTLLLTRLEGNADARAALLRMAGLMGAAALPELLEAMVGQLLSLRGDAPVATWGPIIDTLCTWGEQRHLVAVLIHALSAGL----------------------------------------KPGGXXXXXXXXAP----ALPVRLALRALGFVLSGGGGRAAVAAARDELVRELRSLARLCAALGGAVAAANARIAXXXXXXXXXXXXXXXXXXXVGGG----------APDELVVEALEALGRLHLH---AAXXXXXXXXXXXXXXXXXXAEA---------PLELAPGARELALWATEKLVPAAARGD--------------------------------------------------------------------AFAAAALRPIVALAAEWVALGSGLAEIGLRAQSWGEGLLAGLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALRPLVPALCRLAYQLLVAEAQGAHSPDALWRAVLPFAG-----SGXXXXXXXXXXXXXXXVDKLLAVAAYLHARRNTPEALVARVLPFVCASAAVA------------TDAAPADGDLTAVVARAPAAAAALRRSRIGRSRAALTPAAAAALAPLLKSAPVARALAAXXREGAAGSGRASAA---------MVHVLRAVVASAP 1349
BLAST of mRNA_Ecto-sp6_S_contig92.18379.1 vs. uniprot
Match: W7TM42_9STRA (Condensin-2 complex subunit g2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TM42_9STRA) HSP 1 Score: 223 bits (567), Expect = 2.050e-55 Identity = 227/833 (27.25%), Postives = 333/833 (39.98%), Query Frame = 3
Query: 18 ATLQQQFVALTDLLEDAHPQVRAVAGKGACRVLSVFWEMVPLDTTRALLTRVVGRLASDGSSPAVRLAAVEGLSVLLECPASHAVLKSMLPGVQNLIHDTNKKVRTAFVKLLLVVKGVKSIKYYQVATVDHILARLSEDDAKCPAS---ASGLSKLILNSYFPTGSGVTGSFQVSRCLTLLSQDEGAAVAFFSRLHQNAGVPSSAKMIAMLVRCILVVARAXXXXXXXXXXXXXXXXXKVDRKGKRXXXXXXXGQRGAKGGNKTGLT------------------------------------------------LKASDSKTMSGILNLIASIWESILPALEKTINEPSLDLIQQTVTAGEALSILYRRFSGQDECRAAFMRVAGLAGGDLAPGMLEDVVVEMLALPADAPPSAYGPTVDLLCSWGQHEHLVGAVVESLRKALSVPVKTTXXXXXXXXXXXXXXXXXXXXXXXRGKRXXPASRKEGXXXXXXXXXXXXXXTCIPAPLALNMLGHLLAGGEGHPSTGAARDAIMASDEAVGSLEAVLVLARSAATTRLSSXXXXXXXXXXXXXXXXXXXXREDEERVSLRRHCPDALLVRALEALGRV--YMHREAAVVGDNSSGNPPAAVADEGSAVAGEDVSMLLQPMPFSVKMRELMVWATNTVLPVLVGXXXXXXXXVDMVEEGGTPVKPGSARLVAESPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVRALAGGVFGVVVLLASEWVEVGSGLAEISMR-ADTWGNRLLASLLQEDDGHEGPEQP----SGVNAVLPQLCRLGLHLSARE--AQGARPP 2336
A LQ+Q L LL D P VR A G CRVLS+FWE +PL T+A +TR+VG LA D SS VRL+ VEGL LLE P +H VLKS LP L+ D +VR AFV LL VK V+ IK+Y+V V+H+LAR + D AK P S ++ ++ L+LNSYFP G GVTGS QVSRCLT LSQ + AA+AF+ RL ++ G+ ++ AML++C+L + D++G+ G+ GA+ G + D T+SG+L ++A +W S+ P L +NE + DL++ T+ A E +S LY + + A +++A L A + + ++ S GP LLC WG+ ++ +V+ L + KR AS K + A AL ML H+L+G SD A+ + E V+ + R+A ++ E ++ H L+V ALE R+ ++H +AA+ ++G PP P M + W + +LP +G E+ GT P ++ A ALA +F V +++ S+W+ V A + R W L G+ PEQ SGV ++LP LCR+ L +E +QG P
Sbjct: 398 ALLQRQLDVLQSLLLDPAPHVRVTAVAGVCRVLSLFWEAIPLQVTKAYVTRLVGSLAFDASSALVRLSVVEGLQQLLEQPLAHPVLKSALPLTAPLLQDKTPRVRAAFVGLLQKVKSVRDIKFYEVVPVEHLLARFATDAAK-PGSRTLSARMTGLLLNSYFPQGVGVTGSKQVSRCLTFLSQSKPAALAFYGRLREHVGLGPVTRLTAMLLKCVL----------------GAIADQQNDKEGR--------GEGGAQAGKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAGHGQKKRMSEVDEATLSGMLEVVAVLWASVGPELALPVNEAAADLLRHTL-ASEDMSALYDKLADP----TALLQLAALCPEIFAAALGGPMTKDLKEGAGREADSRAGPIAALLCVWGRSAEVIEMIVKGL--------SALDGCEGRGEGVEGYTPATAMETAGKRKRGGGASGKRKGKGDTGGVQLSEVGP-VSAARALAMLSHILSG---------------QSDAALKARERVVEMERAALEADVAGQGSLLQALGATKDSVEGRI--RGEVKLDEVGHEKRTLMVGALELFFRLQLHVHGQAALATAQATGTPP----------------------PLPEDMVASLDWIEDAILPPALGMQPTASRPSSTSEQPGTQSPPSCGPRTSQ----------------------------VTNCSEGEKKARAALAQELFAVSMMVVSDWIVVLPAAALVMTRKVHQWSTSFFLPDLATASGN--PEQAWVPQSGVTSLLPHLCRIAHQLGLQETRSQGQGSP 1122
BLAST of mRNA_Ecto-sp6_S_contig92.18379.1 vs. uniprot
Match: A0A7S1CM40_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CM40_9STRA) HSP 1 Score: 176 bits (447), Expect = 6.910e-44 Identity = 100/209 (47.85%), Postives = 135/209 (64.59%), Query Frame = 3
Query: 15 DATLQQQFVALTDLLEDAHPQVRAVAGKGACRVLSVFWEMVPLDTTRALLTRVVGRLASDGSSPAVRLAAVEGLSVLLECPASHAVLKSMLPGVQNLIHDTNKKVRTAFVKLLLVVKGVKSIKYYQVATVDHILARLSEDDAKCPASASGLSKLILNSYFPTGSGVTGSFQVSRCLTLLSQDEGAAVAFFSRLHQNAGVPSSAKMIAML 641
DA+LQ+QF AL LL D P VR VA G C+VL VFWE++P T ALL R+VG LA D S AVR A EGL +L+C SH +LK +LP + L+HD +++VR AFV LL V V+SI+++ V +DH++ARL+ D A PA AS +++L+L SYFP G G GS Q+ R + L++ AA+ FF H + V + AK+ ML
Sbjct: 247 DASLQKQFDALGALLSDPVPNVRVVAVHGVCKVLGVFWELIPAATAHALLARLVGELAHDVRSSAVRAAVFEGLDYVLDCGLSHPMLKPLLPALAPLLHDRSERVRAAFVALLQRVSKVRSIRFFDVVHIDHVMARLAMD-ADVPAVASPMTELLLPSYFPQGVG--GSEQLKRAVKCLTRYPAAALVFFRHAHDHTDVAAVAKLGLML 452
BLAST of mRNA_Ecto-sp6_S_contig92.18379.1 vs. uniprot
Match: A0A2R5GJ73_9STRA (Condensin-2 complex subunit G2 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GJ73_9STRA) HSP 1 Score: 184 bits (466), Expect = 1.640e-43 Identity = 134/421 (31.83%), Postives = 209/421 (49.64%), Query Frame = 3
Query: 6 ASYDATLQQQFVALTDLLEDAHPQVRAVAGKGACRVLSVFWEMVPLDTTRALLTRVVGRLASDGSSPAVRLAAVEGLSVLLECPASHAVLKSMLPGVQNLIHDTNKKVRTAFVKLLLVVKGVKSIKYYQVATVDHILARLSEDDAKCPASASGLSKLILNSYFPTGSGVTGSFQVSRCLTLLSQDEGAAVAFFSRLHQNAGVPSSAKMIAMLVRCILVVARAXXXXXXXXXXXXXXXXXKVDRKGKRXXXXXXXGQRGAKGGNKTGLTLKASDSKTMSGILNLIASIWESILPALEKTINEPSLDLIQQTVTAGEALS--ILYRRFSGQDECRAAFMRVAGL--AGGDLAPGMLEDVVVEMLALP------------ADAPPSAY-------GPTVDLLCSWGQHEHLVGAVVESLRKALS 1199
A D LQ+QF A+ LL D P+VR A +GACR+LSVFWE++P T +LL+ +VG L D +SP VR+A + GL + E P + L +LP LIHD +K+VR A + LL+ VK +++IK+Y+V VDH+L RL+ D + S L+KL+L+S++P G+ GS Q+SR L LL A++AFF+ +H++ V S+ K+ +L + I + G + G+RG LT + ++G L +A+IW S+ L + E + +Q + + + + RF D A + VAG G+ A +V E+ A PP GP ++ LC+WG+ + +VG+V+ SL+ + S
Sbjct: 419 AETDQVLQKQFAAIETLLRDVCPRVRVAAVQGACRMLSVFWELIPKKATVSLLSTLVGDLLRDTNSPEVRVAVLRGLEFISENPLAQGALHDVLPHTSPLIHDHSKQVRNALLSLLIRVKSIRTIKFYEVVQVDHLLERLAMD----VSLGSKLTKLLLDSFYPQGA--KGSEQLSRALALLKSHATASMAFFTNVHRHVSVGSACKLALLLGKWI------------------------QNEVGAQLTSGPTIGKRGRVSKKPKTLTTGIDGTPILTGALRAVAAIWRSVATQLNSSRYETARGQMQDAFSFADFVRPVLASNRFDA-DRDMPALLEVAGQLPCDGEFA----REVAAELFTYSPGITFEQYSRGEASLPPQFLVNVVRDLGPVLECLCTWGRVDTVVGSVLASLQASSS 804
BLAST of mRNA_Ecto-sp6_S_contig92.18379.1 vs. uniprot
Match: UPI000F554239 (condensin-2 complex subunit G2-like n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=UPI000F554239) HSP 1 Score: 183 bits (465), Expect = 2.760e-43 Identity = 123/376 (32.71%), Postives = 189/376 (50.27%), Query Frame = 3
Query: 15 DATLQQQFVALTDLLEDAHPQVRAVAGKGACRVLSVFWEMVPLDTTRALLTRVVGRLASDGSSPAVRLAAVEGLSVLLECPASHAVLKSMLPGVQNLIHDTNKKVRTAFVKLLLVVKGVKSIKYYQVATVDHILARLSEDDAKCPASASGLSKLILNSYFPTGSGVTGSFQVSRCLTLLSQDEGAAVAFFSRLHQNAGVPSSAKMIAMLVRCILVVARAXXXXXXXXXXXXXXXXXKVDRKGKRXXXXXXXGQRGAKGGNKTGLTLKASDSKTMSGILNLIASIWESILPALEKTINEPSLDLIQQTVTAGEALSILYRRFSGQDECRAAFMRVAGLAGGDLAPGMLEDVVVEMLALPADAPPSAYGPTVDLLCSW 1142
D LQ+QF L DLL DAHP VRA A G CR+ VFWE++P + LT++V LA D SS AVR+A +GL LL+ SH +LK +L +Q+L+HD ++VR F+ +LL+VKG+K+IK++ + ++ +LA+L + + A L KL++NS+ PT V Q +RC L + AA F+ +H + + ++ K IA L C++ A+ Q K ++ L D T++G+ IA W I L+K+ N+ + + + T AL IL+ F Q +AA + +AG P + + +LPA + S YGP ++ LCSW
Sbjct: 369 DELLQKQFDILKDLLGDAHPTVRATAIHGVCRITGVFWELIPAHIIKMFLTKLVTELAFDTSSSAVRVAVFQGLKFLLDNRLSHPLLKPLLSNLQDLVHDQTERVRVVFLDVLLLVKGLKAIKFWNIVPLEQLLAQLEVEQSA--AVIRRLVKLLVNSFHPTNKSV--DVQATRCSALWQSNPLAARKFYQYVHLHTTISATGKFIAFLGNCLVKCAKNEHDESLSLEPVS---------------------QAEDKENSECLEKLGTYDVNTLAGLAETIAICWGGIKDKLDKSANDATRSKLVEKFT--NALPILFGVFK-QTRIQAACLVIAGFLPSSSLPAFSAKCLSSLSSLPASSLSSEYGPLLNCLCSW 716
BLAST of mRNA_Ecto-sp6_S_contig92.18379.1 vs. uniprot
Match: B7FVJ9_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FVJ9_PHATC) HSP 1 Score: 182 bits (462), Expect = 8.240e-43 Identity = 149/521 (28.60%), Postives = 242/521 (46.45%), Query Frame = 3
Query: 15 DATLQQQFVALTDLLEDAHPQVRAVAGKGACRVLSVFWEMVPLDTTRALLTRVVGRLASDGSSPAVRLAAVEGLSVLLECPASHAVLKSMLPGVQNLIHDTNKKVRTAFVKLLLVVKGVKSIKYYQVATVDHILARLSEDDAKCPAS--ASGLSKLILNSYFPTGSGVTGSFQVSRCLTLLSQDEGAAVAFFSRLHQNAGVPSSAKMIAMLVRCILVVARAXXXXXXXXXXXXXXXXXKVDRKGKRXXXXXXXGQRGAKGGNKTGLTLKASDSKTMSGILNLIASIWESILPALEKTINEPSLDLIQQTVTAGEALSIL--YRRF-------------SGQDECR---AAFMRVAGLAGGDLAPGMLEDVVVEMLALPADAPPSAYGPTVD----LLCSWGQHEHLVGAVVESLRKALSVPVKTTXXXXXXXXXXXXXXXXXXXXXXXRGKRXXPASRKEGXXXXXXXXXXXXXXTCIPAPLALNMLGHLLAGGEGHPSTGAARDAIMASDEAVGSLEAVL 1505
+ + + L +L+D +VR A +LS +W+ +P R+LL +V ASD SS AVR A+ +S+LL+ SHAVL+++LP + NLIHD +KVR A V++LL +K + IKYY V VDH+ ARL+++ P S AS L+ L++NSYFP G GV+ Q+ R ++ LS D AA F++ L VP+ AK+ A+L+RC+ +A +D+ KR + + + L A+++ M+G+ I ++W+SI L K+ NE + D + + S+L Y + S Q++C AA +R AG G++ + + +L PS V LLC W E + ++ +S+ A + R R A+++ +P+ +AL++LG +L G + PS+ AAR+A+++S+ A LE L
Sbjct: 484 EKAIHKAVACLKTVLQDRDARVRVAASIATTTILSTYWDTIPATEIRSLLNHIVAEHASDTSSAAVRAGALTAVSLLLDATQSHAVLRTLLPALGNLIHDKVEKVRLAAVRMLLRIKKIPGIKYYHVVPVDHLKARLADEGRSNPTSSVASSLTALMMNSYFPQGEGVSAMDQMERTISFLSTDPAAAAVFYANLADYFPVPAVAKLAAVLLRCLHSSVQAEEEKQVNAVD--------IDQGRKRRRYGKQQTEEDEDPSDAS--LLSATNTALMAGLAETICTLWQSIEGQLNKSENECTNDYLVNAFSGSGLTSVLNFYEQMAVSEDEGNGEELGSVQEDCYRICAAVLRSAGRLPSKAVKGLVPHISEILASLSEPDTPSVPRKKVSAHIALLCLWDMTEEVAPSLAQSIEAAFESQHELAFSSPSSDNKKR------------RSGRLSKANKE-------------LVVPSLPSRVALSVLGDILRGSD--PSSIAAREALLSSETACSVLEKAL 967
BLAST of mRNA_Ecto-sp6_S_contig92.18379.1 vs. uniprot
Match: A7RGR0_NEMVE (Predicted protein n=3 Tax=Nematostella vectensis TaxID=45351 RepID=A7RGR0_NEMVE) HSP 1 Score: 181 bits (459), Expect = 1.760e-42 Identity = 123/390 (31.54%), Postives = 199/390 (51.03%), Query Frame = 3
Query: 15 DATLQQQFVALTDLLEDAHPQVRAVAGKGACRVLSVFWEMVPLDTTRALLTRVVGRLASDGSSPAVRLAAVEGLSVLLECPASHAVLKSMLPGVQNLIHDTNKKVRTAFVKLLLVVKGVKSIKYYQVATVDHILARLSEDDAKCPASASGLSKLILNSYFPTGSGVTGSFQVSRCLTLLSQDEGAAVAFFSRLHQNAGVPSSAKMIAMLVRCILVVARAXXXXXXXXXXXXXXXXXKVDRKGKRXXXXXXXGQRGAKGGNKTGLTLKASDSKTMSGILNLIASIWESILPALEKTINEPSLDLIQQTVTAGEALSILYRRFSGQDECRAAFMRVAGLAGGDLAPGMLEDVVVEMLALPADAPPSAYGPTVDLLCSWGQHEHLVGAVVESL 1184
DA LQ+QF L +LLED P VRA G CR+ VFWE++P+ T ++L+TR++ +A D +S +VR+A +GL L+E SH +LK++L +++L+HDT++KVR AFV LLL+VKG+K+IK++ + +DH+LARL E ++ P L KL++NS+ P QV+RC L + AA F+ H +A + ++ K I +L RC+ A++ G ++ LT+ D+ T++G+L IA W I L+K+ N+ + + +AL L R A + +AG P + + + +L +GP +D +CSWG+ ++ + SL
Sbjct: 455 DALLQKQFDLLQELLEDPSPIVRATGVHGVCRIAGVFWELIPVHTVKSLITRLITSVAFDATSSSVRVAVFQGLKFLVENHLSHPLLKNLLGSLRDLVHDTSEKVRAAFVDLLLLVKGMKAIKFWTIVPLDHLLARL-EVESSAPVMRK-LVKLLMNSFHPLNK--EPDVQVTRCSALWEANPMAARRFYQYAHLHAPIAATGKFILLLGRCLFQWAQSNANDTTVNGEDTAENKE----------------NEGVDEASEAMLTIP--DADTIAGMLETIAISWAGIKDQLDKSANDSTKAKLVHLFA--KALPRLLEPAESA-RARTAIIFIAGNLPSSSLPNFSKKCLKTLSSLKEGVNNQEFGPMLDCMCSWGKTALVLDMIATSL 819
BLAST of mRNA_Ecto-sp6_S_contig92.18379.1 vs. uniprot
Match: UPI000A2A85E3 (condensin-2 complex subunit G2-like n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A85E3) HSP 1 Score: 180 bits (456), Expect = 3.270e-42 Identity = 127/400 (31.75%), Postives = 196/400 (49.00%), Query Frame = 3
Query: 15 DATLQQQFVALTDLLEDAHPQVRAVAGKGACRVLSVFWEMVPLDTTRALLTRVVGRLASDGSSPAVRLAAVEGLSVLLECPASHAVLKSMLPGVQNLIHDTNKKVRTAFVKLLLVVKGVKSIKYYQVATVDHILARLSEDDAKCPASASGLSKLILNSYFPTGSGVTGSFQVSRCLTLLSQDEGAAVAFFSRLHQNAGVPSSAKMIAMLVRCILV----VARAXXXXXXXXXXXXXXXXXKVD-RKGKRXXXXXXXGQRGAKGGNKTGLTLKASDSKTMSGILNLIASIWESILPALEKTINEPSLDLIQQTVTAGEALSILYRRFSGQDECRA--AFMRVAGLAGGDLAPGMLEDVVVEMLALPADAPPSAYGPTVDLLCSWGQHEHLVGAVVESLRKA 1193
D LQ+QF L L ED P VRA G CR+ VFWE++P+ +ALL +++ +A D SS VR+A +GL LLE SH +LK++L +++LIHD ++KVR+AF+ LLL+VKG+K+IK++ + ++H+LA L + + L KL++NS+ P Q++RC L + AA F+ H +A V ++ K I +L RC++ +A +D + K G+ L D T+SGIL IA W I LEKT NE + Q IL + + ++ RA A + ++ D P + + + +L A +GP +D LCSWGQ E ++ + LR +
Sbjct: 363 DELLQKQFDILQGLFEDPSPIVRATGVHGVCRITGVFWELIPVHXIKALLNKLISEVAFDSSSSTVRVAVFQGLKFLLENHLSHPLLKTLLGNLRDLIHDVSEKVRSAFLDLLLLVKGIKAIKFWTIVPLEHLLACLEVETSATVLRK--LVKLLMNSFHPLNK--EADVQITRCAALWEANPVAARKFYQYAHLHAAVXATGKFILLLCRCLVQWAKNIAPDTSFESFLLDDTCTLNPSVLDPSENKENETIEEVGE----------AVLTLPDIDTISGILETIAISWSGIKDQLEKTSNESIKSKLIQHFK-----KILPKLLTATEDARARAAIIVISAHLPADCLPTFSKRCLSALXSLXDGANSQDFGPMLDCLCSWGQGEKVLDMIDSCLRNS 743 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig92.18379.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig92.18379.1 >prot_Ecto-sp6_S_contig92.18379.1 ID=prot_Ecto-sp6_S_contig92.18379.1|Name=mRNA_Ecto-sp6_S_contig92.18379.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=1015bp MVPLDTTRALLTRVVGRLASDGSSPAVRLAAVEGLSVLLECPASHAVLKSback to top mRNA from alignment at Ecto-sp6_S_contig92:29436..40475- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig92.18379.1 ID=mRNA_Ecto-sp6_S_contig92.18379.1|Name=mRNA_Ecto-sp6_S_contig92.18379.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=11040bp|location=Sequence derived from alignment at Ecto-sp6_S_contig92:29436..40475- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig92:29436..40475- >mRNA_Ecto-sp6_S_contig92.18379.1 ID=mRNA_Ecto-sp6_S_contig92.18379.1|Name=mRNA_Ecto-sp6_S_contig92.18379.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=3045bp|location=Sequence derived from alignment at Ecto-sp6_S_contig92:29436..40475- (Ectocarpus species6 EcLAC_371)back to top |