mRNA_Ecto-sp6_S_contig91.18373.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig91.18373.1
Unique NamemRNA_Ecto-sp6_S_contig91.18373.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
BLAST of mRNA_Ecto-sp6_S_contig91.18373.1 vs. uniprot
Match: D7FSK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK2_ECTSI)

HSP 1 Score: 555 bits (1431), Expect = 1.290e-199
Identity = 271/280 (96.79%), Postives = 275/280 (98.21%), Query Frame = 1
Query:    1 MYDEHIHLPTEESGKLDLVMEQYDRLGFTGAMGSMDVTHIAWSRCPYNQARSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDAAVEKIRTDKQYTEKTFDVYNEDGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVENRNWVSSAGVGTTSVTEPEADSGSVGTKDVNDRPQVEAGHAVRKRQLTTSFAYRKKHKKDIVW 840
            MYDEHIHLPTEESGKLDLV+EQYDRLGFTGAMGSMDVTHIAWSRCPYNQARSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKT VCWDAAVEKIRTDKQYTEKTFDVYN+DGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGR RIL LAMA+QSQERIDNVFFTCCILHNMLHTFDGMDQLVEN NWVSSAGVGTTSVTEPEADSGSVGTKDVN RPQVEAGHAVRKRQLTTSFAYRKKHKKDIV+
Sbjct:    1 MYDEHIHLPTEESGKLDLVIEQYDRLGFTGAMGSMDVTHIAWSRCPYNQARSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKTTVCWDAAVEKIRTDKQYTEKTFDVYNQDGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRLRILMLAMAFQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGVGTTSVTEPEADSGSVGTKDVNGRPQVEAGHAVRKRQLTTSFAYRKKHKKDIVY 280          
BLAST of mRNA_Ecto-sp6_S_contig91.18373.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE)

HSP 1 Score: 520 bits (1340), Expect = 1.910e-183
Identity = 262/311 (84.24%), Postives = 267/311 (85.85%), Query Frame = 1
Query:    1 MYDEHIHLPTEESGKLDLVMEQYDRLGFTGAMGSMDVTHIAWSRCPYNQARSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDAAVEKIRTDKQYT----------------------------EKTFDVYNEDGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVENRNWVSSAGVGTTSVTEPEADSGSVGTKDVNDRPQVEAGHAVRKRQLTTSFAYRKKHKKDIVWLSR 849
            MYDE IHLPTEESGKLD VM+QYDRLGFTGA+GSMDVTHIAWSRCPYNQARSYTGKEGFPTI YQVTVDHAGRAIAVTEGFTGSTNDKTIVCWD AVEKI TDK YT                            EKTFDVYNEDGTTTTLKGCY+LVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAM YQSQERIDNVFFTC ILHNMLHTFDGMDQLVEN NWVSSAGVG T  TEPEAD GSVGTKDVND+PQ+E  H VRKRQLTTSFAYRKKHKKDIVWLSR
Sbjct:  128 MYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMEYQSQERIDNVFFTCYILHNMLHTFDGMDQLVENTNWVSSAGVGATLTTEPEADCGSVGTKDVNDQPQLEIEHTVRKRQLTTSFAYRKKHKKDIVWLSR 438          
BLAST of mRNA_Ecto-sp6_S_contig91.18373.1 vs. uniprot
Match: A0A6H5JUX7_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX7_9PHAE)

HSP 1 Score: 490 bits (1262), Expect = 2.810e-173
Identity = 244/283 (86.22%), Postives = 251/283 (88.69%), Query Frame = 1
Query:    1 MYDEHIHLPTEESGKLDLVMEQYDRLGFTGAMGSMDVTHIAWSRCPYNQARSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDAAVEKIRTDKQYTEKTFDVYNEDGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVENRNWVSSAGVGTTSVTEPEADSGSVGTKDVNDRPQVEAGHAVRKRQLTTSFAYRKKHKKDIVWLSR 849
            MYDEHIHLP EESGKL  VM+QYDRLG                 CPYNQARSYTGK+ FPTI YQVTVDHA RAIAVTEGFTGSTNDKTIVCWDAAV+KIRTDKQYTEKTFD+YNEDGTTTTLKGCY L DNGYHKWQILIEPSKYPLSE+DLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVEN NWVSSAGVGTT  TEPEAD GS GTKDVND+PQ+E GH VRKRQLTTSFAYRKKHKKDIVWLSR
Sbjct:   63 MYDEHIHLPAEESGKLHHVMKQYDRLG-----------------CPYNQARSYTGKDWFPTIAYQVTVDHASRAIAVTEGFTGSTNDKTIVCWDAAVDKIRTDKQYTEKTFDLYNEDGTTTTLKGCYFLDDNGYHKWQILIEPSKYPLSEDDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGVGTTLATEPEADCGSFGTKDVNDQPQLEIGHTVRKRQLTTSFAYRKKHKKDIVWLSR 328          
BLAST of mRNA_Ecto-sp6_S_contig91.18373.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE)

HSP 1 Score: 444 bits (1143), Expect = 3.000e-153
Identity = 218/283 (77.03%), Postives = 242/283 (85.51%), Query Frame = 1
Query:    1 MYDEHIHLPTEESGKLDLVMEQYDRLGFTGAMGSMDVTHIAWSRCPYNQARSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDAAVEKIRTDKQYTEKTFDVYNEDGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVENRNWVSSAGVGTTSVTEPEADSGSVGTKDVNDRPQVEAGHAVRKRQLTTSFAYRKKHKKDIVWLSR 849
            MYDEHI LP+EE+G+LD VM QY++LGF GAMGS DVTHI WSRCPYNQ RSYTGKEG PT+GYQVTV+HAGR +AVTEGFTGSTNDKTI+C D AV++IRTDKQY EK F V+ +DGTT TLKGCY++VDNGYHKW++LIEPSKYPLSE DLLFSKRLESVRKDVECFFGILK RFRILKLAM YQ QER+D VFFTCCILHNMLHT DGM  L E+ NWV SA +  TS      DS SVGTKD+ND+PQVEA HA  KR+LTT+F YRKKHKKDIVWLSR
Sbjct:  170 MYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVGSAELQNTSGHN--LDSSSVGTKDLNDKPQVEAAHAELKRKLTTNFLYRKKHKKDIVWLSR 450          
BLAST of mRNA_Ecto-sp6_S_contig91.18373.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE)

HSP 1 Score: 441 bits (1135), Expect = 5.330e-153
Identity = 210/250 (84.00%), Postives = 228/250 (91.20%), Query Frame = 1
Query:    1 MYDEHIHLPTEESGKLDLVMEQYDRLGFTGAMGSMDVTHIAWSRCPYNQARSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDAAVEKIRTDKQYTEKTFDVYNEDGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVENRNWVSSAGVGTTSVTEPEADSGSVGTKDVNDR 750
            MYDEHI+LP+E++G+LD VM+QYDRLGF+GAMGSMDVTHI WS+CPYN ARSYTGKEG PT+GYQVTV+HAGRAIAVTEGFT STNDKT VCWDA VEKIRTD QYTEKTFDVYNEDGTTTTLKGCY+LVDNGYHKW+IL+EP+KYPLSEND+LFSKRLESVRKDVECFFGILKG FRI K+AMAY  QERIDNVFFTCCILHNMLHTFDGMDQLVEN  WVSSAG GT   TE EADS +VG KD ND+
Sbjct:  141 MYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTVCWDAVVEKIRTDNQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWKILMEPTKYPLSENDILFSKRLESVRKDVECFFGILKGCFRIQKVAMAYHEQERIDNVFFTCCILHNMLHTFDGMDQLVENTLWVSSAGAGTGVATEQEADSSTVGAKDTNDK 390          
BLAST of mRNA_Ecto-sp6_S_contig91.18373.1 vs. uniprot
Match: A0A6H5L0X4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0X4_9PHAE)

HSP 1 Score: 389 bits (999), Expect = 2.380e-131
Identity = 208/283 (73.50%), Postives = 218/283 (77.03%), Query Frame = 1
Query:    1 MYDEHIHLPTEESGKLDLVMEQYDRLGFTGAMGSMDVTHIAWSRCPYNQARSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDAAVEKIRTDKQYTEKTFDVYNEDGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVENRNWVSSAGVGTTSVTEPEADSGSVGTKDVNDRPQVEAGHAVRKRQLTTSFAYRKKHKKDIVWLSR 849
            MYDEHIHL  EESGKLD V+    R G+                CPYNQARSYTGKEGFPTI YQV                      TIVCWDAAVEKIRTDKQYTEKTFDVYNEDGTTTTLKG Y+LVDNGYHKWQILIEPSKYPLSENDLLFSKRL+SVR+D     GILKGRFRILKLAMAYQSQERID+VFFTCCI+HNMLHTFDGMDQLVEN   VSSAGVG T  TE EAD GSVG +DVND+PQ+E G  VRKRQLTTSFAYRKKHKKDIVWLSR
Sbjct:  215 MYDEHIHLLAEESGKLDHVV----RSGWVYG-------------CPYNQARSYTGKEGFPTIAYQVV---------------------TIVCWDAAVEKIRTDKQYTEKTFDVYNEDGTTTTLKGWYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLDSVRRDGSASDGILKGRFRILKLAMAYQSQERIDDVFFTCCIMHNMLHTFDGMDQLVENTIRVSSAGVGATLATELEADCGSVGRRDVNDQPQLEIGRTVRKRQLTTSFAYRKKHKKDIVWLSR 459          
BLAST of mRNA_Ecto-sp6_S_contig91.18373.1 vs. uniprot
Match: A0A6H5JTS2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTS2_9PHAE)

HSP 1 Score: 374 bits (960), Expect = 2.380e-126
Identity = 193/247 (78.14%), Postives = 203/247 (82.19%), Query Frame = 1
Query:  145 QARSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDAAVEKIRTDKQYTEKTFDVYNEDGTTTTLKGCYVLVDNG------------YHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVENRNWVSSAGVGTTSVTEPEADSGSVGTKDVNDRPQVEAGHAVRKRQLTTSFAYRKKHKKDIVWLSR 849
            +A S+T + G PTI YQVTVDHAGRAIAVTEGFTGSTNDKTI CWDAAVEKIRTDKQYT+KTFDVYNEDGTTTTLKGCY+LVDNG            +  WQILIEPSK PLSENDLLFSKRLES             GR R LKLAM YQSQERIDNVFFTCCILHNMLHTFDG+DQLVEN NWVSSAGVG T  TEPE+D GSVGTKDVND+PQ+E GH VRKRQLTTSFAYRKKHKKDIVWLSR
Sbjct:  162 RAASWTTQGGVPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIFCWDAAVEKIRTDKQYTDKTFDVYNEDGTTTTLKGCYLLVDNGTEPVFAFHLSVVFFHWQILIEPSKNPLSENDLLFSKRLES-------------GRVRTLKLAMVYQSQERIDNVFFTCCILHNMLHTFDGIDQLVENTNWVSSAGVGATLATEPESDCGSVGTKDVNDQPQLEIGHTVRKRQLTTSFAYRKKHKKDIVWLSR 395          
BLAST of mRNA_Ecto-sp6_S_contig91.18373.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE)

HSP 1 Score: 356 bits (913), Expect = 5.110e-118
Identity = 180/285 (63.16%), Postives = 207/285 (72.63%), Query Frame = 1
Query:    1 MYDEHIHLPTEESGKLDLVMEQYDRLGFTGAMGSMDVTHIAWSRCPYNQARSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDAAVEKIRTDKQYTEKTFDVYNEDGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVENRNWVSSAGVGTTSVTEPEADSGSVGTKDVN---DRPQVEAGHAVRKRQLTTSFAYRKKHKKDIVWLS 846
            MY EHI LPT +  K   VM QYDRLGF+GA GS DVTHI W  CPYNQARSYTGKEG+PT+ YQVTVDH  R +AVT GFTGSTNDK+I+ +D AV KIR D  Y+EK F VY  DGT   LKGCY+LVDNGYHKW  LI PSKYP+ +NDL FSKRLESVRKDVECFFGI+KGRFRILKL++ Y  QE IDNVFFTCCILHNMLH++D   ++ E  NW  +AG+       P  D  SVG K  +   +  +VE+G   R++QL  SF YRK  K DI WLS
Sbjct:  201 MYAEHIFLPTGDYQKK--VMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHNAWEHNPSLDLSSVGAKGSSASTEDVEVESGFNTRRKQLIASFVYRKS-KNDIAWLS 482          
BLAST of mRNA_Ecto-sp6_S_contig91.18373.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE)

HSP 1 Score: 350 bits (899), Expect = 6.030e-117
Identity = 170/283 (60.07%), Postives = 210/283 (74.20%), Query Frame = 1
Query:    1 MYDEHIHLPTEESGKLDLVMEQYDRLGFTGAMGSMDVTHIAWSRCPYNQARSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDAAVEKIRTDKQYTEKTFDVYNEDGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVENRNWVSSAGVGTTSVTEPEADSGSVGTKD-VNDRPQVEAGHAVRKRQLTTSFAYRKKHKKDIVWLS 846
            +YDE+++LPT E   L  VMEQYDR+GF GA+GS DVTHI W  CPYNQAR YTGKEG PT+ +QVTVDH+GR +AVT GFTG+TNDKTI+ +D AV +IRTD  YTE+ + +Y +DG     KGCY+LVDNGYHKW+ LI PSK P+   DL+FSKRLES RKDVEC+FGILKGRFRI KLA+ +  QE IDNVFFTCCILHNMLH+FD    + E  NW  SAG+   +  +P  D  SVG+ D  ++  +VE G    + +L T+F YR++ K+DIVWLS
Sbjct:  126 LYDEYVYLPTGED--LRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNAADRDPNTDYSSVGSMDGQHEAVEVETGFGALRSKLVTNFVYRREKKRDIVWLS 406          
BLAST of mRNA_Ecto-sp6_S_contig91.18373.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE)

HSP 1 Score: 350 bits (899), Expect = 1.060e-115
Identity = 170/283 (60.07%), Postives = 210/283 (74.20%), Query Frame = 1
Query:    1 MYDEHIHLPTEESGKLDLVMEQYDRLGFTGAMGSMDVTHIAWSRCPYNQARSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDAAVEKIRTDKQYTEKTFDVYNEDGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVENRNWVSSAGVGTTSVTEPEADSGSVGTKD-VNDRPQVEAGHAVRKRQLTTSFAYRKKHKKDIVWLS 846
            +YDE+++LPT E   L  VMEQYDR+GF GA+GS DVTHI W  CPYNQAR YTGKEG PT+ +QVTVDH+GR +AVT GFTG+TNDKTI+ +D AV +IRTD  YTE+ + +Y +DG     KGCY+LVDNGYHKW+ LI PSK P+   DL+FSKRLES RKDVEC+FGILKGRFRI KLA+ +  QE IDNVFFTCCILHNMLH+FD    + E  NW  SAG+   +  +P  D  SVG+ D  ++  +VE G    + +L T+F YR++ K+DIVWLS
Sbjct:  217 LYDEYVYLPTGED--LRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNAADRDPNTDYSSVGSMDGQHEAVEVETGFGALRSKLVTNFVYRREKKRDIVWLS 497          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig91.18373.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSK2_ECTSI1.290e-19996.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KNX4_9PHAE1.910e-18384.24DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JUX7_9PHAE2.810e-17386.22DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JBE2_9PHAE3.000e-15377.03Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHI0_9PHAE5.330e-15384.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L0X4_9PHAE2.380e-13173.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTS2_9PHAE2.380e-12678.14DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JAU4_9PHAE5.110e-11863.16Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KY50_9PHAE6.030e-11760.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPH7_9PHAE1.060e-11560.07Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig91contigEcto-sp6_S_contig91:563728..564961 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score560.1
Seed ortholog evalue6e-157
Seed eggNOG ortholog2880.D7FSK2
Model size852
Hectar predicted targeting categoryother localisation
Exons2
EggNOG free text desc.Plant transposon protein
EggNOG OGs2E2RF@1,2S9YA@2759
Cds size852
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350556.8883572-CDS-Ecto-sp6_S_contig91:563727..5641711682350556.8883572-CDS-Ecto-sp6_S_contig91:563727..564171Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig91 563728..564171 -
1682350556.9014528-CDS-Ecto-sp6_S_contig91:564553..5649611682350556.9014528-CDS-Ecto-sp6_S_contig91:564553..564961Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig91 564554..564961 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig91.18373.1prot_Ecto-sp6_S_contig91.18373.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig91 563728..564961 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig91.18373.1

>prot_Ecto-sp6_S_contig91.18373.1 ID=prot_Ecto-sp6_S_contig91.18373.1|Name=mRNA_Ecto-sp6_S_contig91.18373.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=284bp
MYDEHIHLPTEESGKLDLVMEQYDRLGFTGAMGSMDVTHIAWSRCPYNQA
RSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDAAVEKI
RTDKQYTEKTFDVYNEDGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSE
NDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCC
ILHNMLHTFDGMDQLVENRNWVSSAGVGTTSVTEPEADSGSVGTKDVNDR
PQVEAGHAVRKRQLTTSFAYRKKHKKDIVWLSR*
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mRNA from alignment at Ecto-sp6_S_contig91:563728..564961-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig91.18373.1 ID=mRNA_Ecto-sp6_S_contig91.18373.1|Name=mRNA_Ecto-sp6_S_contig91.18373.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=1234bp|location=Sequence derived from alignment at Ecto-sp6_S_contig91:563728..564961- (Ectocarpus species6 EcLAC_371)
ATGTACGATGAACACATCCACCTCCCTACGGAAGAGAGCGGCAAGCTGGA CCTCGTCATGGAGCAGTACGACCGGCTTGGGTTTACGGGTGCGATGGGTT CTATGGACGTAACACATATCGCTTGGAGCAGGTGCCCCTACAACCAAGCC CGTTCGTACACTGGCAAGGAGGGGTTTCCCACGATCGGGTACCAGGTCAC CGTTGATCACGCTGGCCGGGCTATTGCCGTGACCGAGGGCTTCACCGGCT CGACGAACGACAAGACCATCGTCTGCTGGGATGCCGCGGTGGAGAAGATT CGGACGGACAAGCAGTACACGGAGAAGACGTTCGACGTGTACAACGAGGA TGGCACGACGACGACGCTCAAGGGGTGCTACGTGCTCGTCGACAACGGGT ACCACAAGGTGGATGTATTTGAAGTACCGTGTGGTTGACTTGCCAAAATA TTGTTTTGGAAGAGACATGTGTCCGGCCTGAGACAGATAGACAGAGAAAG AGAGAGCGCTGGCGAGCAACGTCTTTGTTGTCGGGGAAAATGACGGAGCA GCTAGTTTCGGACAGTTTCGACGCCAATCGTTCATGGTATTGACATGTCG GATACGGAAATCAAAACCTCGGCTGCACGCTCTTGCAGTCTACTCCGGTG TTTCATGGGTGGCTGCTGTTATTTTTCGAGCGCCTCCTTCCAACCTCGAA GCCCCCGCTTGAGTCTCCGAGTGTAAATTTCACAGCTTTTAACAACAAAG AACCAAACTCGTACCCCTTCTCCCTCTCGCGTTTTTCCAGTGGCAAATCC TGATCGAGCCCTCCAAGTACCCGCTGAGCGAGAACGACCTGCTCTTTTCG AAGAGGCTGGAGAGCGTGCGGAAGGACGTCGAGTGCTTTTTCGGCATCCT GAAGGGTCGCTTTAGGATCCTGAAGCTCGCCATGGCGTACCAGAGCCAGG AGCGCATCGACAACGTGTTTTTCACGTGCTGCATCTTGCACAACATGCTG CACACCTTCGACGGCATGGACCAGCTGGTGGAGAACAGGAACTGGGTCAG CAGTGCCGGGGTGGGGACCACATCGGTGACGGAGCCGGAGGCGGACTCTG GATCTGTTGGGACGAAGGACGTCAACGACCGGCCTCAAGTGGAGGCAGGG CACGCGGTGCGCAAGCGGCAGCTCACCACGAGCTTCGCGTACCGCAAGAA GCACAAGAAGGACATTGTGTGGCTTTCTAGGTAG
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig91:563728..564961-

>mRNA_Ecto-sp6_S_contig91.18373.1 ID=mRNA_Ecto-sp6_S_contig91.18373.1|Name=mRNA_Ecto-sp6_S_contig91.18373.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=852bp|location=Sequence derived from alignment at Ecto-sp6_S_contig91:563728..564961- (Ectocarpus species6 EcLAC_371)
ATGTACGATGAACACATCCACCTCCCTACGGAAGAGAGCGGCAAGCTGGA
CCTCGTCATGGAGCAGTACGACCGGCTTGGGTTTACGGGTGCGATGGGTT
CTATGGACGTAACACATATCGCTTGGAGCAGGTGCCCCTACAACCAAGCC
CGTTCGTACACTGGCAAGGAGGGGTTTCCCACGATCGGGTACCAGGTCAC
CGTTGATCACGCTGGCCGGGCTATTGCCGTGACCGAGGGCTTCACCGGCT
CGACGAACGACAAGACCATCGTCTGCTGGGATGCCGCGGTGGAGAAGATT
CGGACGGACAAGCAGTACACGGAGAAGACGTTCGACGTGTACAACGAGGA
TGGCACGACGACGACGCTCAAGGGGTGCTACGTGCTCGTCGACAACGGGT
ACCACAAGTGGCAAATCCTGATCGAGCCCTCCAAGTACCCGCTGAGCGAG
AACGACCTGCTCTTTTCGAAGAGGCTGGAGAGCGTGCGGAAGGACGTCGA
GTGCTTTTTCGGCATCCTGAAGGGTCGCTTTAGGATCCTGAAGCTCGCCA
TGGCGTACCAGAGCCAGGAGCGCATCGACAACGTGTTTTTCACGTGCTGC
ATCTTGCACAACATGCTGCACACCTTCGACGGCATGGACCAGCTGGTGGA
GAACAGGAACTGGGTCAGCAGTGCCGGGGTGGGGACCACATCGGTGACGG
AGCCGGAGGCGGACTCTGGATCTGTTGGGACGAAGGACGTCAACGACCGG
CCTCAAGTGGAGGCAGGGCACGCGGTGCGCAAGCGGCAGCTCACCACGAG
CTTCGCGTACCGCAAGAAGCACAAGAAGGACATTGTGTGGCTTTCTAGGT
AG
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