mRNA_Ecto-sp6_S_contig90.18339.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig90.18339.1
Unique NamemRNA_Ecto-sp6_S_contig90.18339.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
BLAST of mRNA_Ecto-sp6_S_contig90.18339.1 vs. uniprot
Match: A0A6H5KYQ9_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYQ9_9PHAE)

HSP 1 Score: 748 bits (1930), Expect = 2.290e-270
Identity = 377/390 (96.67%), Postives = 384/390 (98.46%), Query Frame = 1
Query:  322 MVLGEASSAECRRTLQRAWQASSSEARTHEQLEQEQQQCRVAPPAEESARSAGESKDAVARGMEFRLTTFNLLAPCYKRMHSEVSTPVGGVGTGLLANRAKGQRTARESEFDGVWRERALETVDFICRHMSSSDIICLQEFWLDPAYHAIFQSALEKDYEFYTVKRTGLKSDGVAVLLRRGKFDVLSQQGLSLSSIGNRVALIMHLRESVAGGGEVGEDMILVNTHLAFPHNALDRVNQMSQIRAVTDTVERVMVEAGLPTMTPRVVVGDLNVEETDPVCGHLGRNGFRSAFTSLHRERRVITHRNHRGEEVMCDHVFVKAPGFAGRRRGDSVAPATAPEIPGLVPRLCENVSVEEALVLPGEVDAAEWCPNFSLSDHRPLTVRLKFPPQ 1491
            M+LGEASSAECRRTLQRAWQASSSEARTHEQLE EQQQCRV PP+EE+ARSAGESKDAVARGMEFRLTTFNLLAPCYKRMHSEVSTPVGGVGTGLLANRAKGQRTARESEFDGVWRERALETVDFICRHMSSSDIICLQEFWLDPAYHAIFQSALE+DYEFYTVKRTGLKSDGVAVLLRRGKFDVLSQ GLSLS IG+RVALIMHLRES AGGGEVGEDMILVNTHLAFPHNALDRVNQMSQIRAVTDTVE +MVEAGLPTMTPRVVVGDLNVEETDPVCGHLGRNGFRSAFTSLHRERRVITHRNHRGE+VMCDHVFVKAPGFAGRRRGDSVAPATAPEIPGLVPRLCENVSVEEALVLPGEVDAAEWCPNFSLSDHRPLTVRLKFPPQ
Sbjct:    1 MILGEASSAECRRTLQRAWQASSSEARTHEQLE-EQQQCRVTPPSEETARSAGESKDAVARGMEFRLTTFNLLAPCYKRMHSEVSTPVGGVGTGLLANRAKGQRTARESEFDGVWRERALETVDFICRHMSSSDIICLQEFWLDPAYHAIFQSALEEDYEFYTVKRTGLKSDGVAVLLRRGKFDVLSQLGLSLSCIGDRVALIMHLRESGAGGGEVGEDMILVNTHLAFPHNALDRVNQMSQIRAVTDTVEGMMVEAGLPTMTPRVVVGDLNVEETDPVCGHLGRNGFRSAFTSLHRERRVITHRNHRGEDVMCDHVFVKAPGFAGRRRGDSVAPATAPEIPGLVPRLCENVSVEEALVLPGEVDAAEWCPNFSLSDHRPLTVRLKFPPQ 389          
BLAST of mRNA_Ecto-sp6_S_contig90.18339.1 vs. uniprot
Match: A0A835ZAD2_9STRA (Endonuclease/exonuclease/phosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAD2_9STRA)

HSP 1 Score: 271 bits (694), Expect = 2.940e-83
Identity = 153/336 (45.54%), Postives = 205/336 (61.01%), Query Frame = 1
Query:  520 LTTFNLLAPCYKRMHSEVST----------PVGGVGTGLLANRAKGQRTARESEFDGVWRERALETVDFICRHMSSSDIICLQEFWLDPAYHAIFQSALEKDYEFYTVKRTGLKSDGVAVLLRRGKFDVLSQQGLSLSSIGNRVALIMHLRESVAGGGEVGEDMILVNTHLAFPHNALDRVNQMSQIRAVTDTVERVMVEAGLPTMTPRVVVGDLNVEETDPVCGHLGRNGFRSAFTSLHR-ERRVITHRNHRGEEVMCDHVFVKAPGFAG---RRRGDSVAPATAPEIPGLVPRLCENVSVEEALVLPGEVDAAEWCPNFSLSDHRPLTVRLKFP 1485
            LTTFNLLAP YKR+  +             P GG+   L        R +RESE D +WR RA  TV+F+   M+ SDIIC QE+W   AY  +F+  LE++Y F+T +RTG K+DG+A+LLR+G     + QG+SL SIGNRVAL++H++       E G D +L N HL FPHN  DR  Q  QI+ VT  ++    + GL   TPRV+VGD NVEE+DPVC HL   G++SAF++LH  ++ V+TH NH  EEVM DHV+V   G A    +RRG+S    +  E  G        +S+ +AL+LP  VD + W  +F+LSDHRPL VR+ +P
Sbjct:   47 LTTFNLLAPVYKRIDEQALRKEGLRPQSVDPEGGLLESLKETWQG--RPSRESECDAMWRARARSTVEFVKESMTGSDIICFQEYWFQDAYQELFREQLEQEYSFFTKQRTGHKADGIAILLRKGSAAAAAAQGVSLCSIGNRVALLLHVKP------EGGRDFLLANCHLTFPHNLFDRQLQQQQIQGVTAALDEFAEQEGLAVDTPRVIVGDFNVEESDPVCAHLRDLGYKSAFSTLHSTDKHVVTHYNHNAEEVMVDHVWVL--GLADSQHQRRGESPEGESQQEGEGGAG--APGLSIGKALLLPKGVDDSRWNRSFALSDHRPLQVRIDWP 370          
BLAST of mRNA_Ecto-sp6_S_contig90.18339.1 vs. uniprot
Match: A0A7S3A7G3_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A7G3_9RHOD)

HSP 1 Score: 194 bits (494), Expect = 2.190e-54
Identity = 119/329 (36.17%), Postives = 171/329 (51.98%), Query Frame = 1
Query:  520 LTTFNLLAPCYKRMHSEVSTPV-----GGVGTGLLANRAKGQRTARESEFDGVWRERALETVDFICRHMSSSDIICLQEFWLDPAYHAIFQSALEKDYEFYTVKRTGLKSDGVAVLLRRGKFDVLSQQGLSLSSIGNRVALIMHLRESVAGGGEVGEDMILVNTHLAFPHNALDRVNQMSQIRAVTDTVERVMVEAGLPTMTPRVVVGDLNVEETDPVCGHLGRNGFRSAFTSLHRERRVITHRNHRGEEVMCDHVFVK----APGFAGRRRGDSVAPATAPEIPGLVPRLCENVSVEEALVLPGEVDAAEWCPNFSLSDHRPLTVRLK 1479
            + TFN+LAPCY+R+  E+S  V      G+G G    R +     RES+F  +W  R  E   F+   +   D++CLQEFW D  Y + F     KDYE ++ +RTG K+DG+  +LRRGKF V   Q L     GNRVAL++  R +     +VG  +I+VNTHL FPH+  DRV +  QI  + + ++  +   GL  + P ++ GD+N +  DPVC HL  N F ++F  +     V TH NHR E V  DH++ +        +GR   DS           LVPR        + +V P   D   W  +F LSDHR +++  +
Sbjct:    8 VATFNVLAPCYRRL-DELSVKVQVVEKSGIGPGNFGRRPR----PRESQFRDLWSARCSEMCAFVKADVF--DVVCLQEFWFDEGYVSKFSDCFMKDYELFSAQRTGGKADGLLTMLRRGKFHVEHMQKLEFKDAGNRVALLLCARLA-----DVGSLLIIVNTHLTFPHHEHDRVLRQGQISKLVEFIDGFVDRHGLENV-PVIIGGDMNGDHADPVCAHLRANCFVNSFVQVSGLEDVETHLNHRNERVFVDHIWYRKHIYGSPISGRLETDSSGSDDELRDTHLVPR--------DFIVKPQSEDLKPWVDDFQLSDHRLVSITFE 315          
BLAST of mRNA_Ecto-sp6_S_contig90.18339.1 vs. uniprot
Match: A0A482S2T6_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S2T6_9ARCH)

HSP 1 Score: 159 bits (403), Expect = 1.130e-41
Identity = 92/231 (39.83%), Postives = 137/231 (59.31%), Query Frame = 1
Query:  511 EFRLTTFNLLAPCYKRMHSEVSTPVGGVGTGLLANRAKGQRTARESEFDGVWRERALETVDFICRH-MSSSDIICLQEFWLDPAYHAIFQSAL-EKDYEFYTVKRTGLKSDGVAVLLRRGKFDVLSQQGLSLSSIGNRVALIMHLRESVAGGGEVGEDMILVNTHLAFPHNALDRVNQMSQIRAVTDTVERVMVEAGLPTMTPRVVVGDLNVEETDPVCGHLGRNGFRSAF 1197
            +F + +FNLLAP YKR+ S   T      TG            RES+ + +W  RAL T DF  R  + S+DII LQEFWLD AY  IF+    +  Y+ + +KR G K DGVA++++   F+VL  + + LS++G+RVAL++ L+       E G+D+++ NTHL+FPH+  DR++QM+Q++ +T  ++       +   T RV++GD NVE   PVC HL   G+ S F
Sbjct:   52 QFNIVSFNLLAPVYKRLQSVDIT------TGFRK---------RESQKEELWGARALRTADFFRREVLGSTDIIGLQEFWLDSAYRHIFEDEFAQAGYDVHVLKRPGKKLDGVALVIKSQDFEVLGSEHVFLSTLGDRVALLLWLKHR-----ESGKDLLVANTHLSFPHSTADRLDQMTQMQNLTGVIDTFAHRYHIDYAT-RVIMGDFNVESKSPVCNHLRSVGYASCF 261          
BLAST of mRNA_Ecto-sp6_S_contig90.18339.1 vs. uniprot
Match: A0A4D9D791_9STRA (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D791_9STRA)

HSP 1 Score: 154 bits (388), Expect = 3.330e-37
Identity = 106/281 (37.72%), Postives = 154/281 (54.80%), Query Frame = 1
Query:  511 EFRLTTFNLLAPCYKRMHSEVSTPVGGVGTGLLANRAKGQRTARESEFDGVWRERALETVDFICRHMSSSDIICLQEFWL-DPAYHAIFQSALEKDYEFYTVKRTGLKSDGVAVLLRRGKFDVLSQQGLSLSSIGNRVALIMHLRESVAGGG--EVGEDMILVNTHLAFPHNALDRVNQMSQIRAVTDTVERVMVEAGLPTM-----TPRVVVGDLNVEETDPVCGHLGRNGFRSAFTSLHR--ERRVITHRNHRGEEVMCDHVFVKAPGFAGRR-RGDSV 1320
            +  ++TFN+LAPCYKRM        GG                RE++F      RA ET  FI R + + DIICLQEF++ D  Y  +F S+L   Y+FY   R   K DG+ VLL++GKF V   +G +LS  G+RV L+M L E++AG    + G+ +IL++THL+FPHN  D   Q  Q+ ++T  +E  +   G P +       +++ GD NV+ T+PV G +   GF+       R  E   +THR HRG++V  DH+F ++   A  R RG +V
Sbjct:  122 DISISTFNILAPCYKRMKD------GG----------------READFPERMESRAEETAAFIRRELDT-DIICLQEFFMQDEGYTTLFSSSLADAYDFYLHPRPS-KKDGLGVLLKKGKFRVHGARGATLSRWGSRVGLLMDL-ETLAGATSEQEGQRIILLSTHLSFPHNRFDENQQHRQVSSLTRMLEAYV--KGCPALGGQRDVLQILCGDFNVDLTNPVLGPIHALGFQHVREEGGRRDEANFVTHRTHRGDDVAVDHIFYRSFNAARHRWRGATV 375          
BLAST of mRNA_Ecto-sp6_S_contig90.18339.1 vs. uniprot
Match: UPI000A2A8388 (uncharacterized calcium-binding protein At1g02270 n=2 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A8388)

HSP 1 Score: 147 bits (370), Expect = 1.220e-36
Identity = 97/339 (28.61%), Postives = 161/339 (47.49%), Query Frame = 1
Query:  484 SKDAVARG---MEFRLTTFNLLAPCYKRMHSEVSTPVGGVGTGLLANRAKGQRTARESEFDGVWRERALETVDFICRHMSSSDIICLQEFWLDPAYHAIFQSALEKDYEFYTVKRTGLKSDGVAVLLRRGKFDVLSQQGLSLSSIGNRVALIMHLRESVAGGGEVGEDMILVNTHLAFPHNALDRVNQMSQIRAVTDTVERVMVEAGLPTMTPRVVVGDLNVEETDPVCGHLGRNGFRSAFTSLHRERRVITHRNHRGEEVMCDHVFVKAPGFAGRRRGDSVAPATAPEIPGLVPRLCENVSVEEALVLPGEVDAAEWCPNFSLSDHRPLTVRLKFPPQ 1491
            SK AVA     + FR  TFN+LAPCY+R+                    +GQ +  ES    ++ ER L+++  +       D ICLQEFW +     +F++ L   Y+   +KR G K+DG+A+ + R    +L+ Q L  +  G RVAL++HL        + G ++IL  THL++ HN  D+  +MSQ + V D +   M    +    P ++ GD N  + +PV  ++ +NGF S+F ++H    ++TH++H G+E+  D+VF +  G                          + +    + ++P +     W   F++SDHR L    +   Q
Sbjct:   15 SKMAVAAASNKVSFRCATFNILAPCYRRL--------------------EGQYSKWESSQPNLYMER-LQSIIQLISQQPKLDTICLQEFWFNSDALELFENKLGDRYKIIKLKRQGEKTDGLAIFVDRS-LRILATQSLRFNDYGYRVALLLHLELP-----DNGYEVILTTTHLSYCHNFFDQYVRMSQAQKVVDGINSYMERDDIEA-PPVILCGDFNSPQENPVYKYVCQNGFTSSFKNVHGREPLVTHKDHTGQEMSVDYVFYRNSGS-------------------------QTIKPISSTLIPEKYSDQTWPKEFNISDHRMLITEFEIESQ 300          
BLAST of mRNA_Ecto-sp6_S_contig90.18339.1 vs. uniprot
Match: W7U4G6_9STRA (Calcium-binding endonuclease exonuclease phosphatase family protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U4G6_9STRA)

HSP 1 Score: 152 bits (384), Expect = 1.640e-36
Identity = 103/276 (37.32%), Postives = 150/276 (54.35%), Query Frame = 1
Query:  511 EFRLTTFNLLAPCYKRMHSEVSTPVGGVGTGLLANRAKGQRTARESEFDGVWRERALETVDFICRHMSSSDIICLQEFWL-DPAYHAIFQSALEKDYEFYTVKRTGLKSDGVAVLLRRGKFDVLSQQGLSLSSIGNRVALIMHLRESVAGGG--EVGEDMILVNTHLAFPHNALDRVNQMSQIRAVTDTVERVMVEAGLPTM-----TPRVVVGDLNVEETDPVCGHLGRNGFRSAFTSLHRERRV--ITHRNHRGEEVMCDHVFVKAPGFAGRRR 1308
            +  ++TFN+LAPCYKRM        GG                RE++F      RALET  FI R + + DIICLQEF++ D  Y  +F S+L   Y+FY   R   K DG+ VLLR+GKF +   +G +LS  G+RV L+M L E++AG    + G+ +IL++THL+FPHN  D   Q  Q+ ++T  +E  +   G P +       +++ GD NV+ T+PV   +   GF+       R      +THR HRG++V  DH+F ++   A  RR
Sbjct:  150 DISISTFNILAPCYKRMKD------GG----------------READFPERMESRALETAAFIRRELDT-DIICLQEFFVQDEGYTTLFSSSLADAYDFYLHPRPS-KKDGLGVLLRKGKFRLHGARGATLSRWGSRVGLLMDL-ETLAGATSEQEGQRIILLSTHLSFPHNRFDENQQHRQVSSLTRMLEAYV--KGCPALGGQRDVLQILCGDFNVDLTNPVLAPIHALGFQHVREEGERGDGADFVTHRTHRGDDVAVDHIFYRSFNAARHRR 398          
BLAST of mRNA_Ecto-sp6_S_contig90.18339.1 vs. uniprot
Match: A0A819GST7_9BILA (Hypothetical protein n=2 Tax=Rotaria TaxID=231623 RepID=A0A819GST7_9BILA)

HSP 1 Score: 145 bits (366), Expect = 3.290e-36
Identity = 94/322 (29.19%), Postives = 156/322 (48.45%), Query Frame = 1
Query:  526 TFNLLAPCYKRMHSEVSTPVGGVGTGLLANRAKGQRTARESEFDGVWRERALETVDFICRHMSSSDI--ICLQEFWL-DPAYHAIFQSALEKDYEFYTVKRTGLKSDGVAVLLRRGKFDVLSQQGLSLSSIGNRVALIMHLRESVAGGGEVGEDMILVNTHLAFPHNALDRVNQMSQIRAVTDTVERVMVEAGLPTMTPRVVVGDLNVEETDPVCGHLGRNGFRSAFTSLHRERRVITHRNHRGEEVMCDHVFVKAPGFAGRRRGDSVAPATAPEIPGLVPRLCENVSVEEALVLPGEVDAAEWCPNFSLSDHRPLTVRLKF 1482
            TFN+LAPCYKR+ SE                       RES +D +W +R L  ++ +     S DI  ICLQEFW  +P++  +++S L   Y FYT++RTGL  DG+A+L+    F VL +  L L+ IG+R+ L+++L  +       G++++L+N HL FPH+  +   ++ Q++   + +    +   L      ++ GD N          L    F+S++  +H     +TH  HR E++  D +F K+         D + P ++     L+PR C +++           D  EW    +LSDHR +    K+
Sbjct:   25 TFNVLAPCYKRLSSEYD---------------------RESSYDALWEKRHLSIINLL----QSLDIHLICLQEFWFKNPSFIKLYKSNLLSKYSFYTLRRTGLLDDGLAILVDSNHFKVLDKYELILNDIGDRIGLLLNLEFN-------GKNLLLINIHLTFPHHRFESRLRLKQMKTFLELIHNYQISKNLLNKCTIILCGDFNSSYHKDDVYQLIDKQFQSSYKFIHGNEPNVTHLTHRNEQLGVDFIFYKS---------DILLPVSSE----LIPRGCNSLTWS---------DQGEW----NLSDHRAILTMFKY 288          
BLAST of mRNA_Ecto-sp6_S_contig90.18339.1 vs. uniprot
Match: F0WDT8_9STRA (Uncharacterized protein AlNc14C69G4806 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WDT8_9STRA)

HSP 1 Score: 145 bits (366), Expect = 7.750e-36
Identity = 92/255 (36.08%), Postives = 137/255 (53.73%), Query Frame = 1
Query:  511 EFRLTTFNLLAPCYKRMHSEVSTPVGGVGTGLLANRAKGQRTARESEFDGVWRERALETVDFICRHMSSSDIICLQEFWLDPAYHAIFQSALEKDYEFYTVKRTGLKSDGVAVLLRRGKFDVLSQQGLSLSSIGNRVALIMHLRESVAGGGEVGEDMILVNTHLAFPHNALDRVNQMSQIRAVTDTVERVMVEAGLPTMTPRVVVGDLNVEETDPVCGHLGRNGFRSAFTSLHRERRVITHRNHRGEEVMCDHVF 1275
            +  L TFN+LAPCY R H            GLL           ES+F+ V+  RA E V FI  H    D+ICLQE+W + +Y  IF SA +  +  +T+KR G+K DG+A+L+ + K D+   Q ++    G+RVA++MHL        +  +  +L+N+HL FPH    +  ++SQI+ V ++V+  M +  L    P ++ GD N +  DPV   +  NG+RS F  +H     ITH NH+  EV  D +F
Sbjct:   21 QISLMTFNILAPCYFR-HG-----------GLL-----------ESDFEQVYVTRAQEIVQFI--HKQCCDVICLQEYWFNQSYERIFHSAFQHSHTIHTIKRPGIKQDGLAILVNKQKLDI---QFVNPIQAGDRVAMMMHLTLK-----QPYQSFLLINSHLTFPHGQEYKEIRLSQIQLVLNSVQGYMEQHNL--QVPVLLCGDFN-DHNDPVHQKVLDNGYRSVFEVVHGREARITHCNHKNREVGVDFIF 239          
BLAST of mRNA_Ecto-sp6_S_contig90.18339.1 vs. uniprot
Match: A0A024G3R7_9STRA (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G3R7_9STRA)

HSP 1 Score: 144 bits (363), Expect = 1.640e-35
Identity = 106/333 (31.83%), Postives = 163/333 (48.95%), Query Frame = 1
Query:  520 LTTFNLLAPCYKRMHSEVSTPVGGVGTGLLANRAKGQRTARESEFDGVWRERALETVDFICRHMSSSDIICLQEFWLDPAYHAIFQSALEKDYEFYTVKRTGLKSDGVAVLLRRGKFDVLSQQGLSLSSIGNRVALIMHLRESVAGGGEVGEDMILVNTHLAFPHNALDRVNQMSQIRAVTDTVERVMVEAGLPTMTPRVVVGDLNVEETDPVCGHLGRNGFRSAFTSLHRERRVITHRNHRGEEVMCDHVFVKAPGFAGRRRGDSVAPATAPEIPGLVPRLCENV---------SVEEALVLPGE---------VDAAEWCPNFSLSDHRPL 1464
            L TFN+LAPCY R H            GL+           ESE++ ++  RA E V FI +     D+ICLQE+W + +Y  IF SA +  +  +T+KR G+K DG+A+L+ + K  +     ++    G+RVA++MHL         + +  +L+N+HL FPH    +  ++SQI+ V ++++    +  L  M P ++ GD N +  DPV   +  NG++S F  +H     ITH NH+  EV  D +F    GF   + G S+ P     +P  +P               ++E  L +P E         VD   WC    +SDHRPL
Sbjct:   19 LMTFNILAPCYFR-HG-----------GLV-----------ESEYEHLYVARAQELVQFIQKQCC--DVICLQEYWFNQSYQNIFHSAFQHSHTIHTIKRPGIKQDGLAILVNKQKLKI---NFVNPIQAGDRVAMMMHLTMK-----PLHQSFLLINSHLTFPHGHEYKQTRLSQIQLVLNSIQGYKDQHNLQEM-PVLLCGDFN-DYNDPVHEKVLENGYQSVFQQIHGREARITHCNHKNREVGVDFIFASGLGF--EKNGQSLIPICCDLLPRHLPDTARLKRPSFGHDWNTIERPLEMPIEQCKESQQRLVDY--WC---LISDHRPL 309          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig90.18339.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KYQ9_9PHAE2.290e-27096.67Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A835ZAD2_9STRA2.940e-8345.54Endonuclease/exonuclease/phosphatase n=1 Tax=Tribo... [more]
A0A7S3A7G3_9RHOD2.190e-5436.17Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A482S2T6_9ARCH1.130e-4139.83Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A4D9D791_9STRA3.330e-3737.72Endo/exonuclease/phosphatase domain-containing pro... [more]
UPI000A2A83881.220e-3628.61uncharacterized calcium-binding protein At1g02270 ... [more]
W7U4G6_9STRA1.640e-3637.32Calcium-binding endonuclease exonuclease phosphata... [more]
A0A819GST7_9BILA3.290e-3629.19Hypothetical protein n=2 Tax=Rotaria TaxID=231623 ... [more]
F0WDT8_9STRA7.750e-3636.08Uncharacterized protein AlNc14C69G4806 n=1 Tax=Alb... [more]
A0A024G3R7_9STRA1.640e-3531.83Endo/exonuclease/phosphatase domain-containing pro... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig90contigEcto-sp6_S_contig90:349868..353166 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score752.3
Seed ortholog evalue1.5e-214
Seed eggNOG ortholog2880.D7FL44
Model size1494
KEGG rclassRC00032
KEGG koko:K01662,ko:K18729,ko:K19612
KEGG ReactionR05636
KEGG Pathwayko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130
KEGG ModuleM00096
Hectar predicted targeting categorysignal anchor
Exons4
EggNOG free text desc.Endonuclease/Exonuclease/phosphatase family
EggNOG OGsCOG5239@1,KOG2338@2759
EC2.2.1.7,3.1.13.4
Cds size1494
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03019,ko03029
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350552.7570152-CDS-Ecto-sp6_S_contig90:349867..3501071682350552.7570152-CDS-Ecto-sp6_S_contig90:349867..350107Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig90 349868..350107 -
1682350552.7734497-CDS-Ecto-sp6_S_contig90:350494..3510611682350552.7734497-CDS-Ecto-sp6_S_contig90:350494..351061Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig90 350495..351061 -
1682350552.7836218-CDS-Ecto-sp6_S_contig90:351493..3517601682350552.7836218-CDS-Ecto-sp6_S_contig90:351493..351760Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig90 351494..351760 -
1682350552.795779-CDS-Ecto-sp6_S_contig90:352746..3531661682350552.795779-CDS-Ecto-sp6_S_contig90:352746..353166Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig90 352747..353166 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig90.18339.1prot_Ecto-sp6_S_contig90.18339.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig90 349868..353166 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig90.18339.1

>prot_Ecto-sp6_S_contig90.18339.1 ID=prot_Ecto-sp6_S_contig90.18339.1|Name=mRNA_Ecto-sp6_S_contig90.18339.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=498bp
MSLSTLQSRPQQQQQQQQQQPVLRTSRRRPLKTSCGHLLLLVGATLLPTA
NYAFVPQALLRHLAGAGTGLRSGARKASHSSRASSLYHRNEHRAPPPAKA
AAARSNRMVLGEASSAECRRTLQRAWQASSSEARTHEQLEQEQQQCRVAP
PAEESARSAGESKDAVARGMEFRLTTFNLLAPCYKRMHSEVSTPVGGVGT
GLLANRAKGQRTARESEFDGVWRERALETVDFICRHMSSSDIICLQEFWL
DPAYHAIFQSALEKDYEFYTVKRTGLKSDGVAVLLRRGKFDVLSQQGLSL
SSIGNRVALIMHLRESVAGGGEVGEDMILVNTHLAFPHNALDRVNQMSQI
RAVTDTVERVMVEAGLPTMTPRVVVGDLNVEETDPVCGHLGRNGFRSAFT
SLHRERRVITHRNHRGEEVMCDHVFVKAPGFAGRRRGDSVAPATAPEIPG
LVPRLCENVSVEEALVLPGEVDAAEWCPNFSLSDHRPLTVRLKFPPQ*
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mRNA from alignment at Ecto-sp6_S_contig90:349868..353166-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig90.18339.1 ID=mRNA_Ecto-sp6_S_contig90.18339.1|Name=mRNA_Ecto-sp6_S_contig90.18339.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=3299bp|location=Sequence derived from alignment at Ecto-sp6_S_contig90:349868..353166- (Ectocarpus species6 EcLAC_371)
ATGTCCTTGTCTACTTTGCAATCCCGACCGCAGCAGCAGCAGCAGCAGCA GCAGCAGCAGCCCGTCCTCCGCACGAGCAGAAGAAGACCACTCAAGACCA GCTGCGGGCACCTCCTCTTGCTTGTCGGAGCGACCCTTTTGCCCACAGCC AACTACGCCTTCGTACCACAAGCGTTGTTGCGTCACTTAGCAGGAGCAGG GACGGGATTGCGATCGGGTGCCCGCAAGGCGTCCCACAGCAGCAGGGCCA GCAGCCTATATCACCGTAACGAGCACCGAGCACCACCACCAGCGAAAGCA GCTGCGGCGAGGTCAAACAGGATGGTCCTAGGGGAAGCGTCTTCGGCGGA GTGCCGGCGAACCTTGCAGCGGGCGTGGCAGGCCTCGTCATCGGAAGCGA GGACCCACGAACAACTGGAGGTAAAGCGCAAAAGAAGTGAAAGAATGCTG AAAAAAGACTGCAATAAAATTTGGACGGCATTTGACGGGAAGAGACAGCT TCACGGCGCGTCGATTGATTTGAACGAATGGGTACCTGTGGCTAGGCGGG GGTTTCATCCCCAAGGGCGCGAGGGCGCTGCCTTCGCGGGTGGGGCGCCT TCACCTATTGTACGCCTTGAAGTGTTGGCGTACCACTACATATCCGCAGC AGCAGCAGTCGGGGCGAACTTGTCCCTTTCCCTCTCTATTTTGCATCGCT CGCGGTTGTCTTGACGTGCGAAACCGCTCCGATCTCTCCTCAGACCTCCG TGCATCCGCAGCAGCACTTTTCTCACTGACGCGGATGCCTTCCGCGATCC CAGGATAATCATCGCAAAAACAGTGCAGCATATTGCGAACAATCAAGGAG ACCTAGAGAGTCGAGAGAAATCGAAAAGAAAATCACGAAATATCACCCCC AACTCCCCAACCAAGAGTCGCGACAGGGAAAACATGCCGCCAAACGGAGA TCGGCGAAGGAGAGCTTCCATGGACACGGCCCAACGCTCTCACTCGACGC GCGAGGCCAAGCAATTTCAACGCACAACGTACACAAAGATTACCAACAAG ACGAAGAGCTTAATTCTATCCGCGTTCTAGGCCCGGGTGTCATCACCCCG GGGCTTGCAGCGGCCATCCCGTCCCCTTTCACCCTCACACAAATACGTGC GCGTACGTACAGCGGTCGTAGCGGGCACAGATCCAAGGGCACAGCAGGTG ATCCCTAGATGTTGCATTGGGACAGAAACAAGGCGCTTTGCCGCCAAAGT CCCTACTAACTATGCCGGAGAGACGCTCTCGCGCGCGCCTATGGTCTAGC GCCTGTTCAACACGAACTTACTCCTGCTATAGTGCTTGTACTTGCACACT CGTCCATCTCATGAAATCCCATCGCACCGGTGCCCCCCTCTATGGTTGGA CACCAGCAGGAGCAGCAGCAGTGCCGGGTAGCACCACCCGCAGAAGAATC CGCACGCTCAGCAGGGGAGTCGAAGGATGCGGTGGCCCGGGGCATGGAGT TCCGATTGACCACGTTCAACCTACTCGCGCCATGCTACAAGCGTATGCAC TCGGAGGTTTCAACGCCCGTCGGCGGAGTCGGTACCGGGCTGCTGGCGAA CCGTGCGAAGGGGCAACGCACCGCGCGCGAGAGCGAGTTCGATGGTGTCT GGAGGGAGCGTGCACTCGAGACGGTGAGATAGGTGGCCGCGAGGTGTTTT TGCCCTTGTCGTATTCCTGGTTAGGGACATGCTTGTGTGTTTTTGGTCGG AGGCCGATTACGCACCAATCGGAACCGGTTGCCTGTTTCTTTTTGATGCA AGCGACCGCTGCTGTCTCGCTGCATACGTACATGCCCAGGTGCTTTTCAT GACTTTGGCGGACACTGGCGCGATCACGCCCAAGCTTGTAACAACAACAA GTGTCCTTGTCCCCGTTACCTTCACCCATTATGCGGCAACCACAACTTGC GTGTGTCCCTCAACCGGCCGATGTTGCATCACGCGCCTCTCTAGACGTCT TTCCCCGTCTACTACTGTACATGTACTCGACCCAAAAGCGAACCTCCATA CAAACGAGAACCCGCGCACACCGCCCCCCCCCCCTGCACCCCCGCCGACG TTCAGGTGGACTTCATCTGTCGACACATGTCTTCGTCCGACATCATTTGC CTGCAAGAGTTCTGGCTGGACCCCGCCTACCACGCCATCTTCCAGTCGGC GCTCGAGAAGGACTACGAGTTCTACACCGTCAAGCGCACGGGTCTCAAGT CCGACGGGGTGGCGGTGCTACTAAGGCGCGGCAAGTTCGACGTCCTCTCC CAGCAAGGCCTGTCGCTATCTTCCATCGGCAACAGGGTGGCCCTGATAAT GCACCTCCGGGAGTCGGTCGCGGGGGGCGGCGAGGTCGGGGAGGACATGA TCCTGGTAAACACACACCTGGCGTTCCCCCACAACGCGCTCGATCGCGTC AACCAGATGTCCCAGATCCGAGCGGTCACGGACACGGTCGAGCGGGTGAT GGTGGAGGCCGGGCTGCCGACCATGACTCCCCGGGTGGTTGTCGGGGACC TTAACGTGGAGGAGACGGACCCGGTCTGTGGGCACCTTGGCCGGAACGGC TTCAGGAGCGCGTTTACGTCGTTGCATCGCGAGCGGCGGGTCATTACGCA CCGCAACCACCGAGGGGAAGAGGTGAGGTTCGCCAAGGATAGGGGTCCAT GCCATGACACTTGCTTGCGGCGCCGGAATGGATGGCATGTGTTGTCAACA CCCTTCCTGTCGACTGAACCTACCAGCCCCGTTACCTTTTGATTGATCGC TGTGTTCTTGCCCACGCCCACTGCACGCACGCTTAGTGACCGCAGCGGAG GAGGAAATGCCATAGACGGGGCGTCAGATCGAGTAGGAAATTGTTTGGTG GTGGGATGTCTCAAACGCACACAACGGGGCGAGCGCAGAGTCTGCTCAAC CGAAGGACAGCCCTCTCATGTTTTGCTCAGTTTATCCAGGCATCTTTTGT AACCCCCGATCCTCGTCTTTGTACCCCACACTTCCCCTCTTGTCGCCATT TTTTAAAAGGTTATGTGCGACCACGTGTTTGTCAAGGCGCCGGGCTTTGC CGGGAGGCGAAGAGGAGACTCCGTCGCACCGGCGACGGCACCTGAGATTC CTGGTCTCGTCCCCAGGCTTTGCGAAAACGTGTCCGTCGAGGAGGCGTTG GTCTTGCCGGGGGAAGTAGACGCGGCGGAATGGTGCCCGAATTTCTCGTT GTCAGACCACAGGCCACTGACGGTGCGCCTCAAGTTTCCCCCGCAATGA
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig90:349868..353166-

>mRNA_Ecto-sp6_S_contig90.18339.1 ID=mRNA_Ecto-sp6_S_contig90.18339.1|Name=mRNA_Ecto-sp6_S_contig90.18339.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1494bp|location=Sequence derived from alignment at Ecto-sp6_S_contig90:349868..353166- (Ectocarpus species6 EcLAC_371)
ATGTCCTTGTCTACTTTGCAATCCCGACCGCAGCAGCAGCAGCAGCAGCA
GCAGCAGCAGCCCGTCCTCCGCACGAGCAGAAGAAGACCACTCAAGACCA
GCTGCGGGCACCTCCTCTTGCTTGTCGGAGCGACCCTTTTGCCCACAGCC
AACTACGCCTTCGTACCACAAGCGTTGTTGCGTCACTTAGCAGGAGCAGG
GACGGGATTGCGATCGGGTGCCCGCAAGGCGTCCCACAGCAGCAGGGCCA
GCAGCCTATATCACCGTAACGAGCACCGAGCACCACCACCAGCGAAAGCA
GCTGCGGCGAGGTCAAACAGGATGGTCCTAGGGGAAGCGTCTTCGGCGGA
GTGCCGGCGAACCTTGCAGCGGGCGTGGCAGGCCTCGTCATCGGAAGCGA
GGACCCACGAACAACTGGAGCAGGAGCAGCAGCAGTGCCGGGTAGCACCA
CCCGCAGAAGAATCCGCACGCTCAGCAGGGGAGTCGAAGGATGCGGTGGC
CCGGGGCATGGAGTTCCGATTGACCACGTTCAACCTACTCGCGCCATGCT
ACAAGCGTATGCACTCGGAGGTTTCAACGCCCGTCGGCGGAGTCGGTACC
GGGCTGCTGGCGAACCGTGCGAAGGGGCAACGCACCGCGCGCGAGAGCGA
GTTCGATGGTGTCTGGAGGGAGCGTGCACTCGAGACGGTGGACTTCATCT
GTCGACACATGTCTTCGTCCGACATCATTTGCCTGCAAGAGTTCTGGCTG
GACCCCGCCTACCACGCCATCTTCCAGTCGGCGCTCGAGAAGGACTACGA
GTTCTACACCGTCAAGCGCACGGGTCTCAAGTCCGACGGGGTGGCGGTGC
TACTAAGGCGCGGCAAGTTCGACGTCCTCTCCCAGCAAGGCCTGTCGCTA
TCTTCCATCGGCAACAGGGTGGCCCTGATAATGCACCTCCGGGAGTCGGT
CGCGGGGGGCGGCGAGGTCGGGGAGGACATGATCCTGGTAAACACACACC
TGGCGTTCCCCCACAACGCGCTCGATCGCGTCAACCAGATGTCCCAGATC
CGAGCGGTCACGGACACGGTCGAGCGGGTGATGGTGGAGGCCGGGCTGCC
GACCATGACTCCCCGGGTGGTTGTCGGGGACCTTAACGTGGAGGAGACGG
ACCCGGTCTGTGGGCACCTTGGCCGGAACGGCTTCAGGAGCGCGTTTACG
TCGTTGCATCGCGAGCGGCGGGTCATTACGCACCGCAACCACCGAGGGGA
AGAGGTTATGTGCGACCACGTGTTTGTCAAGGCGCCGGGCTTTGCCGGGA
GGCGAAGAGGAGACTCCGTCGCACCGGCGACGGCACCTGAGATTCCTGGT
CTCGTCCCCAGGCTTTGCGAAAACGTGTCCGTCGAGGAGGCGTTGGTCTT
GCCGGGGGAAGTAGACGCGGCGGAATGGTGCCCGAATTTCTCGTTGTCAG
ACCACAGGCCACTGACGGTGCGCCTCAAGTTTCCCCCGCAATGA
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