mRNA_Ecto-sp6_S_contig90.18330.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig90.18330.1 vs. uniprot
Match: A0A6H5K566_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K566_9PHAE) HSP 1 Score: 563 bits (1451), Expect = 3.430e-195 Identity = 281/340 (82.65%), Postives = 292/340 (85.88%), Query Frame = 1
Query: 148 ACLLCLCGDDLVGSPTDDVYGDGGSVCGIDITFGGDVPEYKYLCSGDSRVLCGTDDHISVYSLDGSTGGGDDDSGDPPVGSELIGCVADSQDDRVMAEGPMSADTMSAEICLGICSGMDASYTHFGTQYGNECWCTGSLGSTETSTACTMDCAGNTAETCGGFDALTLYEIVSEAPPTPAPFTPPGXXXXXXSPVVPSGDYDFVGCVADSQSSRVMPVGPLAEDVMSAEICFGICSAQDDSYTHFGTQYGEECWC-----TGSLGTTETSSACTMDCAGNSAETCGGFDALSMYEIVADTSSPPTPAPTLPVXXXXXXXSIVSDDYKVIGCVADNQAARV 1152
+ + CLCGD+LVGSPTDDVYGDGGSVCGIDITFGGDVPEYKYLCSGDSRVLCGTDDHISVYSLDGSTGGGDDDSGDPPVGSELIGCVADSQDDRVM+EGPMSA TMSAEICLGICS MD+SYTHFGTQYG ECWCTGSLG+TETSTACT CAGN ETCGGFDALTLYEI+SEAPPTPAP TPPG SPVVPSGDYDFV CVADSQSSRVMPVGPLAE VMSAEICFGICSAQDDSYTHFGTQYGEE + T ETS+AC CAGN E CGGFDALS+YEIVAD SPPT APTLP SIVSDDY+VIGCVADNQAARV
Sbjct: 271 SAVKCLCGDELVGSPTDDVYGDGGSVCGIDITFGGDVPEYKYLCSGDSRVLCGTDDHISVYSLDGSTGGGDDDSGDPPVGSELIGCVADSQDDRVMSEGPMSAATMSAEICLGICSEMDSSYTHFGTQYGEECWCTGSLGTTETSTACTYPCAGNAGETCGGFDALTLYEIISEAPPTPAPLTPPGPMPAPASPVVPSGDYDFVDCVADSQSSRVMPVGPLAEAVMSAEICFGICSAQDDSYTHFGTQYGEEDLSGQPRPPPTAPTXETSTACVYPCAGNPEEICGGFDALSVYEIVADIPSPPTTAPTLPAPRTPAPASIVSDDYEVIGCVADNQAARV 610
BLAST of mRNA_Ecto-sp6_S_contig90.18330.1 vs. uniprot
Match: D7G5F7_ECTSI (WSC domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5F7_ECTSI) HSP 1 Score: 513 bits (1321), Expect = 7.880e-181 Identity = 256/269 (95.17%), Postives = 260/269 (96.65%), Query Frame = 1
Query: 31 LEVQRAVAESLSATPNPHTPRHTHVQQPTRQPRHNRRKGACLLCLCGDDLVGSPTDDVYGDGGSVCGIDITFGGDVPEYKYLCSGDSRVLCGTDDHISVYSLDGSTGGGDDDSGDPPVGSELIGCVADSQDDRVMAEGPMSADTMSAEICLGICSGMDASYTHFGTQYGNECWCTGSLGSTETSTACTMDCAGNTAETCGGFDALTLYEIVSEAPPTPAPFTPPGXXXXXXSPVVPSGDYDFVGCVADSQSSRVMPVGPLAEDVMSAEI 837
+EVQRA+A+SLSA PNPHTPRHTH QQPTRQPRHNRRK CL CGDDLVGSPTDDVYGDGGSVCGIDITFGGDVPEYKYLCSGDSRVLCGTDDHISVYSLDGSTGGGDDDSGDPPVGSE IGCVADSQDDRVMAEGPMSADTMSAEICLGICSGMDASYTHFGTQYGNECWCTGSLGSTETSTACTMDCAGNTAETCGGFDALTLYEIVSEAPPTPAPFTPPGXXXXXXSPVVPSGDYDFVGCVADSQSSRVMPVGPL EDVMSAE+
Sbjct: 10 VEVQRALADSLSAIPNPHTPRHTHAQQPTRQPRHNRRKENCL---CGDDLVGSPTDDVYGDGGSVCGIDITFGGDVPEYKYLCSGDSRVLCGTDDHISVYSLDGSTGGGDDDSGDPPVGSEFIGCVADSQDDRVMAEGPMSADTMSAEICLGICSGMDASYTHFGTQYGNECWCTGSLGSTETSTACTMDCAGNTAETCGGFDALTLYEIVSEAPPTPAPFTPPGXXXXXXSPVVPSGDYDFVGCVADSQSSRVMPVGPLTEDVMSAEV 275
BLAST of mRNA_Ecto-sp6_S_contig90.18330.1 vs. uniprot
Match: D7FL81_ECTSI (WSC domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL81_ECTSI) HSP 1 Score: 377 bits (967), Expect = 1.950e-128 Identity = 198/202 (98.02%), Postives = 199/202 (98.51%), Query Frame = 1
Query: 595 MDCAGNTAETCGGFDALTLYEIVSEAPPTPAPFTPPGXXXXXXSPVVPSGDYDFVGCVADSQSSRVMPVGPLAEDVMSAEICFGICSAQDDSYTHFGTQYGEECWCTGSLGTTETSSACTMDCAGNSAETCGGFDALSMYEIVADTSSPPTPAPTLPVXXXXXXXSIVSDDYKVIGCVADNQAARVMPVGPLAEDTMSAEVG 1200
MDCAGNTAETCGGFDALTLYEI SEAPPTPAPFTPPGXXXXXXSPVVPSGDYDFVGCVADSQSSRVMPVGPLAEDVMSAEICFGICSAQDDS THFGTQYGEECWCTGSLGTTETSSACTMDCAGNSAETCGGFDALSMYEIVADTSSPPTPAPTLPVXXXXXX SIVSDDY+VIGCVADNQAARVMPVGPLAEDTMSAEVG
Sbjct: 1 MDCAGNTAETCGGFDALTLYEIASEAPPTPAPFTPPGXXXXXXSPVVPSGDYDFVGCVADSQSSRVMPVGPLAEDVMSAEICFGICSAQDDSNTHFGTQYGEECWCTGSLGTTETSSACTMDCAGNSAETCGGFDALSMYEIVADTSSPPTPAPTLPVXXXXXXASIVSDDYEVIGCVADNQAARVMPVGPLAEDTMSAEVG 202
BLAST of mRNA_Ecto-sp6_S_contig90.18330.1 vs. uniprot
Match: A0A6H5K6V8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6V8_9PHAE) HSP 1 Score: 320 bits (821), Expect = 6.660e-103 Identity = 151/166 (90.96%), Postives = 157/166 (94.58%), Query Frame = 1
Query: 148 ACLLCLCGDDLVGSPTDDVYGDGGSVCGIDITFGGDVPEYKYLCSGDSRVLCGTDDHISVYSLDGSTGGGDDDSGDPPVGSELIGCVADSQDDRVMAEGPMSADTMSAEICLGICSGMDASYTHFGTQYGNECWCTGSLGSTETSTACTMDCAGNTAETCGGFDAL 645
+ + CLCGD+LVGSPTDDVYGDGGSVCGIDITFGGDVPEYKYLCSGDSRVLCGTDDHISVYSLDGSTGGGDDDSGDPPVGSELIGCVADSQDDRVM+EGPMSA TMSAEICLGICS MD+SYTHFGTQYG ECWCTGSLG+TETSTACT CAGN ETCGGFDAL
Sbjct: 271 SAVKCLCGDELVGSPTDDVYGDGGSVCGIDITFGGDVPEYKYLCSGDSRVLCGTDDHISVYSLDGSTGGGDDDSGDPPVGSELIGCVADSQDDRVMSEGPMSAATMSAEICLGICSEMDSSYTHFGTQYGEECWCTGSLGTTETSTACTYPCAGNAGETCGGFDAL 436
BLAST of mRNA_Ecto-sp6_S_contig90.18330.1 vs. uniprot
Match: A0A6H5K384_9PHAE (WSC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K384_9PHAE) HSP 1 Score: 321 bits (822), Expect = 2.010e-102 Identity = 177/266 (66.54%), Postives = 190/266 (71.43%), Query Frame = 1
Query: 148 ACLLCLCGDDLVGSPTDDVYGDGGSVCGIDITFGGDVPEYKYLCSGDSRVLCGTDDHISVYSLDGSTGGGDDDSGDPPVGSELIGCVADSQDDR-------------------------------VMAEGPMSADTMSAEIC-----LGICSGMDASYTHFGTQYGN---------ECWCTGSLGSTETSTACTMDCAGNTAETCGGFDALTLYEIVSEAPPTPAPFTPPGXXXXXXSPVVPSGDYDFVGCVADSQSSRVMPVGPL 810
+ + CLCGD+LVGSPTDDVYGDGGSVCGIDITFGGDVPEYKYLCSGDSRVLCGTDDHISVYSLDGSTGGGDDDSGDPPVGSELIGCVADSQDDR VM+EGPMSA TMSAE+ + + + F + +CWCTGSLG+TETSTACT CAGN ETCGGFDALTLYEI+SEAPPTPAP TPPGXXXXXX PVVPSGDYDFV CVADSQS RV G +
Sbjct: 211 SAVKCLCGDELVGSPTDDVYGDGGSVCGIDITFGGDVPEYKYLCSGDSRVLCGTDDHISVYSLDGSTGGGDDDSGDPPVGSELIGCVADSQDDRDGYTELHVRRIATALQVNPAGSRASPFFDSQVMSEGPMSAATMSAEVGAIPFQVNFLVSLTKALLFFPLRMLPSSSPKSRLVQCWCTGSLGTTETSTACTYPCAGNAGETCGGFDALTLYEIISEAPPTPAPLTPPGXXXXXXXPVVPSGDYDFVDCVADSQSPRVRQRGEI 476
BLAST of mRNA_Ecto-sp6_S_contig90.18330.1 vs. uniprot
Match: A0A6H5JNN6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNN6_9PHAE) HSP 1 Score: 305 bits (780), Expect = 4.910e-95 Identity = 196/357 (54.90%), Postives = 237/357 (66.39%), Query Frame = 1
Query: 154 LLCLCGDDLVGSPTDDVYGDGGSVCGIDITFGGDVPEYKYLCSGDSRVLCGTDDHISVYSLDGSTGGGDDDSGDP---PVGS---ELIGCVADSQDDRVMAEGPMSADTMSAEICLGICSGMDASYTHFGTQYGNECWCTGSLGSTETSTACTMDCAGNTAETCGGFDALTLYEIVSEAPPTPAPFTPPGXXXXXXSPVVPSGDYDFVGCVADSQSSRVMPVGPLAEDVMSAEICFGICSAQDDSYTHFGTQYGEECWCTGSLGTTETSSACTMDCAGNSAETCGGFDALSMYEIVADTSSP---PTPAPTLPVXXXXXXXSIV-SDDYKVIGCVADNQAARVMPVGPLAEDTMSAE 1194
L CLCGD+LVGSP DDVYG GGSVCGIDITFGGDVPEYKYLCSGDSRV CGTDDHISVYS+ GSTGGG++D +P PVGS EL GCVAD Q +RVM P++ + MSAE D+ G+ +GSLG+T++STAC DCAGN E C GF+A+++YEI S +P + P XXXXXX VVPS D + VGCVAD +RVMPVGPL+ + M+AE DD GSLG T++S+AC DCAGN+ E C GF+A+S+YEI + T+SP PT XXXXXXX +V SDDY++IG VAD ARVMPVGPL+ + M+AE
Sbjct: 180 LQCLCGDELVGSPIDDVYGIGGSVCGIDITFGGDVPEYKYLCSGDSRVRCGTDDHISVYSIGGSTGGGNEDEEEPNPAPVGSDDFELTGCVADDQSNRVMPVEPIAENAMSAEDAAH--PSRDSPNISRRFALGDVRAWSGSLGATQSSTACDYDCAGNAEEICSGFNAMSVYEIASVTT-SPTDY-PTXXXXXXXXXVVPSDDSELVGCVADFNGARVMPVGPLSSNAMTAE--------DDDG---------------GSLGATQSSTACDYDCAGNADEICSGFNAMSVYEIASVTTSPADDPTXXXXXXXXXXXXXXXVVPSDDYELIGYVADFNGARVMPVGPLSSNAMTAE 509
BLAST of mRNA_Ecto-sp6_S_contig90.18330.1 vs. uniprot
Match: A0A6H5KQ76_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ76_9PHAE) HSP 1 Score: 265 bits (676), Expect = 1.440e-79 Identity = 157/361 (43.49%), Postives = 198/361 (54.85%), Query Frame = 1
Query: 154 LLCLCGDDLVGSPTDDVYGDGGSVCGIDITFGGDVPEYKYLCSGDSRVLCGTDDHISVYSLDGSTGGGDDDSGDPPVGSELIGCVADSQDDRVMAEGPMSADTMSAEICLGICSGMDASYTHFGTQYGNECWCTGSLGSTETSTACTMDCAGNTAETCGGFDALTLYEIVSEAPPTPAPFTPPGXXXXXXSPVVPSGD-YDFVGCVADSQSSRVMPVGPLAEDVMSAEICFGICSAQDDSYTHFGTQYGEECWCTGSL---------GTTETSSACTMDCAG--NSAETCGGFDALSMYEIVADTSSPPTPAPTLPVXXXXXXXSIVSDDYKVIGCVAD-NQAARVMPVGPLAEDTMSAEV 1197
L CLCGD+L GSP DDV G+ SVCG+D T ++PEYK+LCSG+S VLCGTD H+SVYSL+ G +D GD ELIGC D ++ RVM+ GP+ D MSAEIC IC + + THFGTQYGNEC+CT LG + ST CT DC GN ETCGGFD +T Y I P +GD Y +GC+AD R+M + MSAEIC+GIC +D + THFGTQ+G+EC+C G T+S C M CAG + E CGGFD +S YEI+ ++ P ++ Y +GC D + M TMSA+V
Sbjct: 236 LECLCGDELDGSPYDDVRGE--SVCGVDYTDDVNIPEYKFLCSGESTVLCGTDTHMSVYSLNEDRGANND--GD----YELIGCRVDDREARVMSVGPIEGDAMSAEICFDICRELHPTSTHFGTQYGNECFCTDVLGESAVSTDCTYDCIGNPDETCGGFDRITAYRIAGSEPS--------------------AGDGYVSIGCLADKNGDRIMDRRMVTSIPMSAEICYGIC--KDGTNTHFGTQWGKECFCLADADFENMDKHGGELSTASHCQMGCAGFTHRDEKCGGFDEMSAYEIIPESKVP-----------------VIDGPYTALGCFEDPRDGDKAMDALFTDATTMSADV 549
BLAST of mRNA_Ecto-sp6_S_contig90.18330.1 vs. uniprot
Match: D7FMV1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMV1_ECTSI) HSP 1 Score: 258 bits (660), Expect = 1.480e-76 Identity = 156/364 (42.86%), Postives = 198/364 (54.40%), Query Frame = 1
Query: 148 ACLLCLCGDDLVGSPTDDVYGDGGSVCGIDITFGGDVPEYKYLCSGDSRVLCGTDDHISVYSL-DGSTGGGDDDSGDPPVGSELIGCVADSQDDRVMAEGPMSADTMSAEICLGICSGMDASYTHFGTQYGNECWCTGSLGSTETSTACTMDCAGNTAETCGGFDALTLYEIVSEAPPTPAPFTPPGXXXXXXSPVVPSGD-YDFVGCVADSQSSRVMPVGPLAEDVMSAEICFGICSAQDDSYTHFGTQYGEECWCTGSL---------GTTETSSACTMDCAG--NSAETCGGFDALSMYEIVADTSSPPTPAPTLPVXXXXXXXSIVSDDYKVIGCVAD-NQAARVMPVGPLAEDTMSAEV 1197
+ + CLCGD+L GSP DDV G+ SVCG+D T ++PEYK+LCSG+S VLCGTD H+SVYSL +G D GD ELIGC D ++ RVM+ GP+ D MSAEIC IC + + THFGTQYGNEC+CT L + ST CT +C GN ETCGGFD +T Y I P +GD Y +GC+AD R+M + MSAEIC+GIC +D + THFGTQ+G+EC+C G T+S C M CAG + E CGGFD +S YEI+ P P +PV + Y +GC D + M TMSA++
Sbjct: 285 SAVKCLCGDELDGSPYDDVRGE--SVCGVDYTDDVNIPEYKFLCSGESTVLCGTDTHMSVYSLNEGREVSETSDDGD----YELIGCRVDDREARVMSAGPIEGDAMSAEICFDICRELHPTSTHFGTQYGNECFCTDVLRESAVSTGCTYECRGNPDETCGGFDMITAYRIAGSEPS--------------------AGDGYVSIGCLADKNGDRIMDGRMVTSIPMSAEICYGIC--KDGTNTHFGTQWGKECFCMADADFENMEKHGGELSTASHCQMGCAGFTHRDEKCGGFDEMSAYEII--------PEPEVPV---------IDGPYTALGCFEDPRDGDKAMDALFTDATTMSADI 603
BLAST of mRNA_Ecto-sp6_S_contig90.18330.1 vs. uniprot
Match: A0A6H5JYR3_9PHAE (WSC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYR3_9PHAE) HSP 1 Score: 208 bits (530), Expect = 1.830e-61 Identity = 96/110 (87.27%), Postives = 104/110 (94.55%), Query Frame = 1
Query: 148 ACLLCLCGDDLVGSPTDDVYGDGGSVCGIDITFGGDVPEYKYLCSGDSRVLCGTDDHISVYSLDGSTGGGDDDSGDPPVGSELIGCVADSQDDRVMAEGPMSADTMSAEI 477
+ + CLCGD+L GSPTDDVYG+GGSVCGIDITFGGDVPEYKYLCSGDSRVLCGTDDHISVYSLDGSTGGGDDDSGDPPVGSE IGCVADSQDDRVM+ GP++ DTMSAE+
Sbjct: 149 SAVKCLCGDELAGSPTDDVYGEGGSVCGIDITFGGDVPEYKYLCSGDSRVLCGTDDHISVYSLDGSTGGGDDDSGDPPVGSEFIGCVADSQDDRVMSVGPIAEDTMSAEM 258
BLAST of mRNA_Ecto-sp6_S_contig90.18330.1 vs. uniprot
Match: A0A6H5K223_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K223_9PHAE) HSP 1 Score: 135 bits (341), Expect = 8.070e-35 Identity = 75/183 (40.98%), Postives = 103/183 (56.28%), Query Frame = 1
Query: 481 LGICSGMDASYTHFGTQYGNECWCTGS----LGSTETSTACTMDCAGNTAETCGGFDALTLYEIVSEAPPTPAPFTPPGXXXXXXSPVVPSGDYDFVGCVADSQSSRVMPVGPLAEDVMSAEICFGICSAQDDSYTHFGTQYGEECWCTGS-LGTTETSSACTMDCAGNSAETCGGFDALSMY 1014
+ C+ A Y ++GTQYG ECWC S LG ST C+ C+G+ ETCGGF+A+++Y S+ TP P V+ D ++GC DSQ+ R+ PV A DVM+ C C+ Y ++GTQYGEECWC S T S+ C DC+G++ ETCGGF+A+S+Y
Sbjct: 1 MQFCADFCAEYAYYGTQYGEECWCGNSGYDTLGE---STDCSFGCSGDAGETCGGFNAMSVYSTGSDPVETPTPVA-----------VIEPTDPTYLGCYVDSQTDRIFPV-TTASDVMTLAFCADFCA----EYAYYGTQYGEECWCGNSGYDTLGESTDCNYDCSGDADETCGGFNAMSVY 164 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig90.18330.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig90.18330.1 >prot_Ecto-sp6_S_contig90.18330.1 ID=prot_Ecto-sp6_S_contig90.18330.1|Name=mRNA_Ecto-sp6_S_contig90.18330.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=401bp VPVANDNICSLEVQRAVAESLSATPNPHTPRHTHVQQPTRQPRHNRRKGAback to top mRNA from alignment at Ecto-sp6_S_contig90:250859..260362- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig90.18330.1 ID=mRNA_Ecto-sp6_S_contig90.18330.1|Name=mRNA_Ecto-sp6_S_contig90.18330.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=9504bp|location=Sequence derived from alignment at Ecto-sp6_S_contig90:250859..260362- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig90:250859..260362- >mRNA_Ecto-sp6_S_contig90.18330.1 ID=mRNA_Ecto-sp6_S_contig90.18330.1|Name=mRNA_Ecto-sp6_S_contig90.18330.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1203bp|location=Sequence derived from alignment at Ecto-sp6_S_contig90:250859..260362- (Ectocarpus species6 EcLAC_371)back to top |