mRNA_Ecto-sp6_S_contig90.18322.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig90.18322.1 vs. uniprot
Match: D7G6K5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6K5_ECTSI) HSP 1 Score: 2125 bits (5506), Expect = 0.000e+0 Identity = 1100/1143 (96.24%), Postives = 1107/1143 (96.85%), Query Frame = 1
Query: 628 SVDSKKVPGTRPGACMVCLEDCDNVLDSAWLHRLAASSSASDVGGTDCTVTACVSCLKTYFTGIVEAGFDGACPRMRCMCCPRVVCEWVWAPLVEATVLETFQKRAATLLSIQCGMCHSRGTIMVKPPVDHCYSSALDKLMAMIASGLAPATPPAATTATTITTQGSPANIKSSTNGGDNSVASSTCNAQRLEIFRASLERYISGHEIDPSLCYIALEAAIANPGIRQAAQESRDELMVLLMSCVEADSERRANLHIRFIRSNPMVVTQCCKSLHCYPCRVVGGHHPQTCEQYEAGRGHQDVCKCPGCGVYVVKGDGCDSISCICGHDFSWSELVAARHRRIADAFRDAHPEDTGRAAAQIIRRGPPTAADLGAGPQEDINEHAGARGDIEEQQQQGHEYPLDAPAATTAGXXXXXXXXXXXXXXXQPATGGAWGEPVGHWEPVXXXXXXQRWVPGVEQGPGAGADAWQPNQGPVQELERAPLHGTGQGTVEEERDEPVPVPEENGRLSAADEFRLANAYAEAYPRELARGRAVIYGEENPHFTVQRACAQSNQLPPLLALSYFHQPRPASTSETEAAWLLRAAEDWRTTNQGEVNAVRRRDEAARSSLVEAFYSCDDLLRHIAAEYTRSALRVAAPFTSVAATDRPRVFWSRLEQYQQQQANGEQNGEPLFKWLGIVEPPPPTGHQPTWEEGDDGAVADEDAWEVPFADAEIEVETFEVLPPARRLFTPWPSARTGRVDLRRTPPSSRGRRHAPDPASRLVSATSTFGTLNLRAEVELWVAGSNIRQEGLRRLMAVQERELSKAWVALWSHRRRLDPVSKTWVDADDPGDAAVRAAARRVVFLEAHPEQACQEQGAMMKAFVRRNGAEVLKAVEEADAELAAAWERMHDNRDDVDASHSSTTPPASTSPSTFDRAYAAYRKHIDTRASAVLVANSLPPTSVASATLHLRRIGRMADAWESANHRRVCAQRFVDHFSGAAGAEKAAQEREALPKRLRESRAAANEDAAAFGAVVALVVAPMLIGRASQMCECDMGAILSNAVDWVAFNGEAFEEELQRMEARLRLAPGTMAGKNVKDEGCSGGGMGRVLDGCECNLESSVSSCSRLVACPIVTRRILRVPEPVCPECEDGSGVFGTDLFDLFA 4056
S DSKKVPGTRPGACMVCLEDCDNVLDSAWLHRLAASSSASDVGGTDCTVTACVSCLKTYFTGIVEAGFDGACPRMRCMCCPRVVCEWVWAPLVEATVLETFQKRAATLLSIQCGMCHSRGTIMVKPP DHCYSSALDKLMAMIASGLAPATPP+ATTAT ITTQGSPANIKSSTNGGDNSVASSTCNAQRLEIFRASLERYISGHEIDPSLCYIALEAAIANPGI QAAQESRDELMVLLMSCVE DSERRANLHIRFIRSNPMVVTQCCKSLHCYPCRVVGGHHPQTCEQYEAGRGHQDVCKCPGCGVYVVKGDGCDSISCICGHDFSWSELVAARHRRIADAFRDAHPEDTGRAAAQIIRRGPPTAADLGAGPQEDINEH GARGDIEEQQQQGHEYPLDAPAAT AG XXXXXXXXXXXXXXQPAT GAWGEPV XXXXXXQRWVPGVEQGPGA ADAWQPNQ P QELERAPLHGTGQ T+EEERDEPVPVPEENGRLSA DEFRLANAYAEAYPRELARGRAVIYGEENPHFTVQRACAQS+QLPPLLALSYFHQP PASTSETEAAWL+RAAEDWRTTNQGEVNAVRRRDEAARSSLVEAFYS DDLLRHIAAEY RSALRVA PFTSVAATDRPR FWSRLEQY QQQANGEQNGEPLFKWLGIVEPPPPTG Q TWEEGDDGAVADEDAWEVPFADAEIEVETFEVLPP RRLFTPWPSARTGRVDLR TPPSSRGRRHA DPASRLV ATSTFGTLNLRAEVELWVAG+NIRQEGLRRLMAVQERELSKAWVALWSHRRRLDPVSKTWVDADDPGDAAVRAAARRVVFLEAHPEQACQEQGAMMKAFVRRNGAEVLKAVEEADAELAAAWERMHDN DDVDASHSSTTPPASTSPSTFDRAYAAYRKHIDTRASA LVANSLPPTSVASATL LRRIGRMADAWESANHRRVCAQRF DHFSGAAGAEKAAQEREALPKRLRESRAAANEDAAAFGAVVALVVAPMLIGRASQMCECDMGAILSNAVDWVAFNGEAFEEELQRMEARLRL+PGTMAGKNVKDEGCSGGGMGR+LDGCECNLESSVSSCSRLVACPIVTRRILRVPEPVCPECEDGSGVFGTDLFDLFA
Sbjct: 47 SADSKKVPGTRPGACMVCLEDCDNVLDSAWLHRLAASSSASDVGGTDCTVTACVSCLKTYFTGIVEAGFDGACPRMRCMCCPRVVCEWVWAPLVEATVLETFQKRAATLLSIQCGMCHSRGTIMVKPPADHCYSSALDKLMAMIASGLAPATPPSATTATAITTQGSPANIKSSTNGGDNSVASSTCNAQRLEIFRASLERYISGHEIDPSLCYIALEAAIANPGIGQAAQESRDELMVLLMSCVE-DSERRANLHIRFIRSNPMVVTQCCKSLHCYPCRVVGGHHPQTCEQYEAGRGHQDVCKCPGCGVYVVKGDGCDSISCICGHDFSWSELVAARHRRIADAFRDAHPEDTGRAAAQIIRRGPPTAADLGAGPQEDINEHVGARGDIEEQQQQGHEYPLDAPAATAAGTXXXXXXXXXXXXXXQPATSGAWGEPVXXXXXXXXXXXXQRWVPGVEQGPGA-ADAWQPNQRPAQELERAPLHGTGQATIEEERDEPVPVPEENGRLSAEDEFRLANAYAEAYPRELARGRAVIYGEENPHFTVQRACAQSSQLPPLLALSYFHQPCPASTSETEAAWLMRAAEDWRTTNQGEVNAVRRRDEAARSSLVEAFYSGDDLLRHIAAEYARSALRVAPPFTSVAATDRPRAFWSRLEQYLQQQANGEQNGEPLFKWLGIVEPPPPTGDQSTWEEGDDGAVADEDAWEVPFADAEIEVETFEVLPPPRRLFTPWPSARTGRVDLRPTPPSSRGRRHALDPASRLVLATSTFGTLNLRAEVELWVAGTNIRQEGLRRLMAVQERELSKAWVALWSHRRRLDPVSKTWVDADDPGDAAVRAAARRVVFLEAHPEQACQEQGAMMKAFVRRNGAEVLKAVEEADAELAAAWERMHDNHDDVDASHSSTTPPASTSPSTFDRAYAAYRKHIDTRASAALVANSLPPTSVASATLQLRRIGRMADAWESANHRRVCAQRFADHFSGAAGAEKAAQEREALPKRLRESRAAANEDAAAFGAVVALVVAPMLIGRASQMCECDMGAILSNAVDWVAFNGEAFEEELQRMEARLRLSPGTMAGKNVKDEGCSGGGMGRILDGCECNLESSVSSCSRLVACPIVTRRILRVPEPVCPECEDGSGVFGTDLFDLFA 1187
BLAST of mRNA_Ecto-sp6_S_contig90.18322.1 vs. uniprot
Match: A0A6H5JAV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAV0_9PHAE) HSP 1 Score: 1582 bits (4097), Expect = 0.000e+0 Identity = 835/1004 (83.17%), Postives = 862/1004 (85.86%), Query Frame = 1
Query: 1048 MAMIASGLAPATPPAATTATTITTQGSPANIKSSTNGGDNSVASSTCNAQRLEIFRASLERYISGHEIDPSLCYIALEAAIANPGIRQAAQESRDELMVLLMSCVEADSERRANLHIRFIRSNPMVVTQCCKSLHCYPCRVVGGHHPQTCEQYEAGRGHQDVCKCPGCGVYVVKGDGCDSISCICGHDFSWSELVAARHRRIADAFRDAHPEDTGRAAAQIIRRGPPTAADLGAGPQEDINEHAGARGDIEEQQQQGHEYPLDAPAATTAGXXXXXXXXXXXXXXXQPATGGAWGEPVGHWEPVXXXXXXQRWVPGVEQGPGAGADAWQPNQGPVQELERAPLHGTGQGTVEEERDEPVPVPEENGRLSAADEFRLANAYAEAYPRELARGRAVIYGEENPHFTVQRACAQSNQLPPLLALSYFHQPRPA-STSETEAAWLLRAAEDWRTTNQGEVNAVRRRDEAARSSLVEAFYSCDDLLRHIAAEYTRSALRVAAPFTSVAATDRPRVFWSRLEQYQQQQANGEQNGEPLFKWLGIVEPPPPTGHQPTWEEGDDGAVADEDAWEVPFADAEIEVETFEVLPPARRLFTPWPSARTGRVDLRRTPPSSRGRRHAPDPASRLVSATSTFGTLNLRAEVELWVAGSNIRQEGLRRLMAVQERELSKAWVALWSHRRRLDPVSKTWVDADDPGDAAVRAAARRVVFLEAHPEQACQEQGAMMKAFVRRNGAEVLKAVEEADAELAAAWERMHDNRDDVDASHSSTTPPASTSPSTFDRAYAAYRKHIDTRASAVLVANSLPPTSVASATLHLRRIGRMADAWESANHRRVCAQRFVDHFSGAAGAEKAAQEREALPKRLRESRAAANEDAAAFGAVVALVVAPMLIGRASQMCECDMGAILSNAVDWVAFNGEAFEEELQRMEARLRLAPGTMAGKNVKDEGCSGGGMGRVLDGCECNLESSVSSCSRLVACPIVTRRILRVPEPVCPECEDGSGVFGTDLFDLFA 4056
M MIASGLAPA PAATTAT ITTQ SPA+IK++ SVASSTCNAQR+E FR SLERYI+G+EIDPS CYIALEAAIANPGI QAAQESRDELMVLL+SCV DSERR NLHIRFIRSNPMVVT+C KSLHCYPCRVVGGHHPQTCEQYEAGRGHQDVCKCPGCGVYVVKGDGCDSISC+CGH F+WSELVAARHRRI DAFRDAHPEDTGRAAAQIIRRGPPTAADLG GPQEDINEH GA GDIE QQ GVE GPGAGADA QPNQ VQELERAP H TGQGTVEEERDEPVPVP ENGRLSA DEFRLANAYAEAY RELARGRA IYGEENPHFTVQRA AQS+QLPPL ALSYF QPRPA TSETEAAWL RAAEDW TTNQG+VN VRRRDEAARSSLVEAFYS DDLLRHIAAEY RSALRVAAPFTSVAATDRPR FWSRLEQYQQQQA+GEQNGEPLFKWLGIVEPPPPTG Q TW++ DDGAVADEDAWE PFA+AEIE ETFE+LPP + LFT WPSART RVDLR TPPSS GRR A DPASRLVSATSTFGTL LRAEVELWVAGSNIRQ+GLRRLMAVQERELSKAWVALW HRRRLDPVSKTWVDADD GDAAVRAAARRVVFLEAHPEQACQEQGAMMKAF+RRNGA VLKAVEEADAELAAAWERMHDNRDDVDA+HSSTTPPASTSP+ FDRAY AYRKHIDTRASA LVANSLPPT ASATL LRRIGRM DAWESANHRRVCAQRF DHFSGAAGAEKAAQEREALPKR RESRAAANEDA AFG VVALVVAPMLIGRASQMCECDM AILSNAVDWVAFNGEAFEEELQRMEARL+L PGTMAGK+ K+EGCS GGMGR+LD CEC LE SVSSCSRLVACPIVTRRILRVP+PVCPECEDGSGVFGTDLFDLFA
Sbjct: 1 MTMIASGLAPAASPAATTATAITTQDSPADIKAAPTVATKSVASSTCNAQRMERFRDSLERYIAGYEIDPSPCYIALEAAIANPGIGQAAQESRDELMVLLLSCV-VDSERRENLHIRFIRSNPMVVTRCYKSLHCYPCRVVGGHHPQTCEQYEAGRGHQDVCKCPGCGVYVVKGDGCDSISCVCGHCFNWSELVAARHRRIVDAFRDAHPEDTGRAAAQIIRRGPPTAADLGTGPQEDINEHVGAHGDIEAQQH------------------------------------------------------------GVEHGPGAGADAGQPNQEAVQELERAPRHRTGQGTVEEERDEPVPVPGENGRLSAEDEFRLANAYAEAYRRELARGRAAIYGEENPHFTVQRARAQSDQLPPLSALSYFRQPRPAICTSETEAAWLTRAAEDWLTTNQGKVNVVRRRDEAARSSLVEAFYSGDDLLRHIAAEYARSALRVAAPFTSVAATDRPRAFWSRLEQYQQQQADGEQNGEPLFKWLGIVEPPPPTGDQSTWKDDDDGAVADEDAWEAPFANAEIEEETFEILPPPQTLFTAWPSARTERVDLRPTPPSSWGRRRALDPASRLVSATSTFGTLRLRAEVELWVAGSNIRQKGLRRLMAVQERELSKAWVALWGHRRRLDPVSKTWVDADDSGDAAVRAAARRVVFLEAHPEQACQEQGAMMKAFIRRNGAVVLKAVEEADAELAAAWERMHDNRDDVDAAHSSTTPPASTSPAAFDRAYTAYRKHIDTRASAALVANSLPPTCAASATLQLRRIGRMVDAWESANHRRVCAQRFADHFSGAAGAEKAAQEREALPKRPRESRAAANEDATAFGDVVALVVAPMLIGRASQMCECDMEAILSNAVDWVAFNGEAFEEELQRMEARLKLPPGTMAGKDGKNEGCSEGGMGRILDRCECKLERSVSSCSRLVACPIVTRRILRVPKPVCPECEDGSGVFGTDLFDLFA 943
BLAST of mRNA_Ecto-sp6_S_contig90.18322.1 vs. uniprot
Match: A0A6H5JJ77_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ77_9PHAE) HSP 1 Score: 163 bits (412), Expect = 1.230e-42 Identity = 85/105 (80.95%), Postives = 90/105 (85.71%), Query Frame = 3
Query: 126 KVYEYHDAAFL*CASTGRPKARRHVSLFSRPFLYWPRPRRSNPSRFRPRHAPASFQLLCLERRSEKPIVSIIGSNSGTSISSVITSTSTLGESKISYHHVRHLSK 440
+VYEYHDAAFL CAST RPKARRHV LFSRP LY RPR NPSRF PRHAPAS QLLCLERRS+KPIVS IGSNSGTSI+ VIT TS+LG SKI+YH VRHLSK
Sbjct: 45 EVYEYHDAAFLQCASTSRPKARRHVFLFSRPILYRSRPRPPNPSRFHPRHAPASIQLLCLERRSDKPIVSTIGSNSGTSINGVITRTSSLGGSKITYHLVRHLSK 149
BLAST of mRNA_Ecto-sp6_S_contig90.18322.1 vs. uniprot
Match: A0A835YLL2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLL2_9STRA) HSP 1 Score: 168 bits (426), Expect = 2.020e-40 Identity = 108/332 (32.53%), Postives = 160/332 (48.19%), Query Frame = 1
Query: 664 GACMVCLEDCDNVLDSAWLHR---LAASSSASDVGGT-DCTVTACVSCLKTYFTGIVEAGFDGACPRMRCMCCPRVVCEWVWAPLVEATVLETFQKRAATLLSIQCGMCHSRGTIMVKPPVDHCYSSALDKLMAMIASGLAPATPPAATTATTITTQGSPANIKSSTNGGDNSVASSTCNAQRLEIFRASLERYISGHEIDPSLCYIALEAAIANPGIRQAAQESRDELMVLL---MSCVEADSERRANLHIRFIRSNPMVVTQCCKSLHCYPCRVVGGHHPQTCEQYEAGR--GHQDVCKCPGCGVYVVKGDGCDSISCICGHDFSWSELV 1632
G C VC+E+ V+ + +LH S + D D T AC CL YFT IV G++G CPRM+C CP VV E W+ LVE F++RAA LL++QC CH+R ++M H + + D A+ P + + + + S+T +F + + G P C + E +P + E+ ++ L+ + C++ D ERRA LH RF+ +P+V T CC ++HCY CRV HH QTC +Y+A + V CP C +Y+VK DGC S+SC+CGH F + +
Sbjct: 79 GMCSVCMEE-QQVVGAEYLHATESFCTSEAYRDATAVHDSTHVACEGCLAKYFTAIVAEGYNGVCPRMKCPFCPLVVPEMRWSALVEPETSRLFRQRAAILLTLQCSSCHTRCSLM---EFAHYSAGSADFERAL------------------------PGALAADLHLFEAGAISAT-------VFVERIAAAVDGDIAQP--CAVTAEQ---DPELNHVVPETTAKVWALMREVLKCIQ-DWERRAVLHSRFLSLHPVVQTPCCMAVHCYRCRVGHVHHGQTCAEYQAATYPSEELVATCPNCSIYIVKNDGCSSVSCVCGHGFCFESRL 369
BLAST of mRNA_Ecto-sp6_S_contig90.18322.1 vs. uniprot
Match: A0A7S4DEH3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DEH3_HETAK) HSP 1 Score: 158 bits (399), Expect = 3.230e-35 Identity = 109/360 (30.28%), Postives = 168/360 (46.67%), Query Frame = 1
Query: 670 CMVCLEDCDNVLDSAWLHRLAASSSASDVGGTDCTVTACVSCLKTYFTGIVEAGFDGACPRMRCM-CCPRVVCEWVWAPLVEATVLETFQKRAATLLSIQCGMCHSRGTIMVKPPVDHCYSSALDKLMAMIASGLAPATPPAATTATTITTQGSPANIKSSTNGGDNSVASSTCNAQRLEIFRASLERYISGHEIDPSLC-------YIALEAAIANPGIRQAAQESRDELMVLLMSCVEADSERRANLHIRFIRSNPMVVTQCCKSLHCYPCRVVGGHHPQTCEQYEAGR-GHQDVCKCPGCGVYVVKGDGCDSISCICGHDFSWSELVAARHRRI-ADAFRDAHPEDTGRAAAQIIRR 1719
C++C E+ +A + ++ G DC +T+C +CLKT+F IV+ G+DG +M C C V W+P V+A+ LE FQ+RAA LLS+QC CHSR + + P S+ L + L P + + + GD + +R +L R++ G + + + + AA +P A +R L+ + D+ RA LH+R++R +P V T CC++ C+ CR H QTC + A H D+ C CG+ +VKGDGC S++C+CG+ F W + R R + AD F++ H ED R AA R
Sbjct: 69 CLICYEN------------VAENKIKKNICGPDCPLTSCTACLKTHFESIVKQGYDGILKKMTCPGCISMTVPSDAWSPFVDASTLELFQRRAAILLSLQCSGCHSRKDLFI--PETELPSNPEQHLK----NTLKP--------------------LLENEHAGD-------------QEYRLALGRFVRGEDNEDAFFQQLRTRFFPGKFAAAEDPDAGPWAAAARPVLLSV------RDARARAVLHLRYLREHPKVTTGCCQATQCFRCRTGRWHAGQTCAEVAAASYQHSDLLTCASCGLQLVKGDGCSSVTCVCGNHFDWDQ----RCREVFADGFQERHGEDASRLAALAHHR 367
BLAST of mRNA_Ecto-sp6_S_contig90.18322.1 vs. uniprot
Match: A0A7S2SQB9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQB9_9STRA) HSP 1 Score: 151 bits (381), Expect = 5.840e-33 Identity = 101/332 (30.42%), Postives = 149/332 (44.88%), Query Frame = 1
Query: 760 GTDCTVTACVSCLKTYFTGIVEAGFDGACPRMRCMCCP-RVVCEWVWAPLVEA--------TVLETFQKRAATLLSIQCGMCHSRGTIMVKPPVDHCYSSAL-DKLMAMIASGLAPATPPAATTATTITTQGSPANIKSSTNGGDNSVASSTCNAQRLEIFRASLERYISGHEIDPSLCYIALEAAIANPGIRQAAQESRDELMVLLMSCVEADSERRANLHIRFIRSNPMVVTQCCKSLHCYPCRVVGGHHPQTCEQYEAGRGH-QDVCKCPGCGVYVVKGDGCDSISCICGHDFSWSELVAARHRRIADAFRDAHPEDTGRAAAQIIRRG 1722
G DC C SCL + V++G+ GA RM C P R+ W P V +++ F A +LS+QCG CH+R +M +P S AL DK M + + AP +++ +E ++ G + + EA + P +D LL+ +E D ER+A LH F+R P ++ CCKS+HC+ C + G H +TCE+++A R +DV CPGCGV + KGDGC S+SC+CG+ F+W VA +A F + + T AAQI+ G
Sbjct: 45 GPDCQTIMCSSCLAEHCRVTVDSGYPGAAIRMHCPIHPKRIAAAGRWQPAVMEHLGQADGKALIDRFTSHARGILSLQCGSCHARRDLM-RPT-----SKALADKAMQALQASHAPVYD---------------------------------------HLYKQHVEPFLVG-AVSQEHVIVQCEAFLPKPEFALTHPSGKDTAFGLLLDSIE-DDERKATLHYAFLRRFPKCISNCCKSVHCFRCHISGFHTNKTCEEFQASRTTVEDVVPCPGCGVQLTKGDGCSSVSCVCGNSFNWDTEVAKIREALAKLFCEDFRDRTAHHAAQILFEG 329
BLAST of mRNA_Ecto-sp6_S_contig90.18322.1 vs. uniprot
Match: A0A7S3UWB4_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWB4_HETAK) HSP 1 Score: 143 bits (361), Expect = 2.510e-31 Identity = 105/354 (29.66%), Postives = 156/354 (44.07%), Query Frame = 1
Query: 670 CMVCLEDCDNVLDSAWLHRLAASSSASDVGGTDCTVTACVSCLKTYFTGIVEAGFDGACPRMRCMCCPRV-VCEWVWAPLVEATVLETFQKRAATLLSIQCGMCHSRGTIMVKPPVDHCYSSALDKLMAMIASGLAPATPPAATTATTITTQGSPANIKSSTNGGDNSVASSTCNAQRLEIFRASLERYISGHEIDPSLCYIALEAAIANPGIRQAAQES--RDELMVLLMSCVEADSERRANLHIRFIRSNPMVVTQCCKSLHCYPCRVVGGHHPQTCEQYEAGR-GHQDVCKCPGCGVYVVKGDGCDSISCICGHDFSWSELVAARHRRIADAFRDAHPEDTGRAAAQIIRR 1719
C VCL D V S L L G C + AC SC ++F GIV +DG +M C C + V WA + +L FQ+RAA LLS+QC CH+R + ++ D + DK M I + L VAS ++ + F +L + SG + + + + E D + +L+S D+ +RA LH+R++RS P T CCK + C+ CR H QTC Q A + + +V CP C + +VKGDGC S++C+CG F+W + + +A+ FRD + + GR AA + R
Sbjct: 69 CQVCL---DEVPQSLILKELC---------GPKCPLVACKSCASSHFEGIVSESYDGILRKMTCPSCISMEVPSSTWANFTDPEMLALFQRRAAILLSLQCAGCHTRKDLFIQ---DQSLPTDADKHMEGIETML---------------------------------VAS-----EKRDAFSQALGLFTSGSINEEDFFQLICITLFPDQFQSSSPDEGPWEDVMKPILLSI--RDARQRAVLHLRYLRSFPKCSTPCCKRVQCFRCRTGQWHEGQTCSQVLAAQFQNSEVLTCPACAIQLVKGDGCSSVTCVCGKTFNWDQR---KKECVAETFRDLYGDSAGRMAALMFIR 364
BLAST of mRNA_Ecto-sp6_S_contig90.18322.1 vs. uniprot
Match: A0A7S1TQX8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TQX8_9STRA) HSP 1 Score: 134 bits (338), Expect = 8.120e-28 Identity = 102/350 (29.14%), Postives = 152/350 (43.43%), Query Frame = 1
Query: 769 CTVTACVSCLKTYFTGIVEAGFDGACPRMRCM--CCPRVVCEWVWAPLVE-------ATVLETFQKRAATLLSIQCGMCHSRGTIMVK--PPVDHCYS---SALDKLMAMIASGLAPATPPAATTATTITTQGSPANIKSSTNGGDNSVASSTCNAQRLEIFRASLERYISGHEIDPSLCYIALEAAIAN-----------------PGIRQAAQESRDELMVLLMSCVEADSERRANLHIRFIRSNPMVVTQCCKSLHCYPCRVVGGHHPQTCEQYEA-GRGHQDVCKCPGCGVYVVKGDGCDSISCICGHDFSWSELVAARHRRIADAFRDAHPEDTGRAAAQIIRRG 1722
C +T C CL Y V+A + GAC +RC C ++ +W L++ A + F K A ++LS+QCG CHSRGT+ V P C+ + L A +A + A +TT T G ++ + ++ L +Y+ GH +D C+ AL+ + PG + EL+V + C D ERRA L R + +P + CC HCY C+ G H +C+ + RG + V C CGV++VKGDGC SI+C+CG +F+W V FRD +D R A + + RG
Sbjct: 260 CGMTICRPCLGAYVQSHVDALYLGACKPLRCPDPACRAILPMPLWLALLDQKTGDERAGLRRQFIKYAKSVLSLQCGSCHSRGTLHVGDYPNAPSCFPLKPGCVHPLSMAGACSVAKSKAVVAALGREVTT----------TAPGGEAIPPKLAS----DVMEVPLMKYMRGH-LDAGACWAALKRCVPQLACASEGLADEEYCPTVPGHADPTAQYEKELLVNAVLCRIPDPERRAALLSRVLALHPKAKSNCCAYTHCYRCKTKGFHDGVSCDANQGWDRGAEQVVTCHNCGVWIVKGDGCSSINCVCGANFNWDTRVTQMGDAQVAGFRDFFTKDPFRIAYEFVVRG 594
BLAST of mRNA_Ecto-sp6_S_contig90.18322.1 vs. uniprot
Match: A0A7S4D641_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D641_HETAK) HSP 1 Score: 123 bits (308), Expect = 5.190e-26 Identity = 96/339 (28.32%), Postives = 138/339 (40.71%), Query Frame = 1
Query: 685 EDCDNVLDSAWLHRLAASSSASDVGGTDCTVTACVSCLKTYFTGIVEAGFDGACPRMRCMCC-PRVVCEWVWAPLVEATVLETFQKRAATLLSIQCGMCHSRGTIMVKPPVDHCYSSALDKLMAMIASGLAPATPPAATTATTITTQGSPANIKSSTNGGDNSVASSTCNAQRLEIFRASLERYISGHEIDPSL-----CYIALEAAIANPGI--RQAAQESRDELMVLLMSCVEADSERRANLHIRFIRSNPMVVTQCCKSLHCYPCRVVGGHHPQTCEQY----EAGRGHQDVCKCPGCGVYVVKGDGCDSISCICGHDFSWSELVAARHRRIADAF 1665
+DCD L++ L S G+DC + AC C+ +F + +G+DG +M C C R V +W P+ + + +RAA LL++QC CH R TI+ P D + T G P +K E ER+ G D L Y + NP + + Q+ RDE RA L++R++R P V T CC++ C+ CR H TCE+ EA + DV CP C + +VKGDGC+ ++C+CGH F W EL R +A AF
Sbjct: 78 DDCDICLETLSSLELEYSFC-----GSDCPLKACKECIAKHFKDTISSGYDGILRKMTCPACVKRSVPVSLWGPVCSSNQTTLYSRRAAILLTLQCSGCHERKTIL--PDEDENQ---------------------------VLPTDGMPKAVK--------------------EELLMEFERFNDGKINDQELYERISTYFFSFENLPNPWLVMQPILQKIRDEGF-------------RAELYLRYLRHYPKVSTICCEAEQCFRCRTEDWHDGMTCEEMRKELEAEQLSDDVLNCPECDIQLVKGDGCEWVTCVCGHGFDWEEL---RRASLAAAF 346
BLAST of mRNA_Ecto-sp6_S_contig90.18322.1 vs. uniprot
Match: A0A7S1XW06_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XW06_9STRA) HSP 1 Score: 117 bits (292), Expect = 2.130e-23 Identity = 88/303 (29.04%), Postives = 132/303 (43.56%), Query Frame = 1
Query: 784 CVSCLKTYFTGIVEAGFDGACPRMRCMCC-PRVVCEWVWAPLVEAT--VLETFQKRAATLLSIQCGMCHSRGTIMVKPPVDHCYSSALDKLMAMIASGLAPATPPAATTATTITTQGSPANIKSSTNGGDNSVASSTCNAQRLEIFRASLERYISGHEIDPSLCYIALEAAIANPGIRQAAQESRDELMVLLMSCVEADSERRANLHIRFIRSNPMVVTQCCKSLHCYPCRVVGGHHPQTCEQYEA---GRGHQDVCKCPGCGVYVVKGDGCDSISCICGHDFSWS----ELVAARHRRIADA 1662
C CL YF+G+V G+CPR+ C+ R V WA +V + E K A LS QCG CH+R ++ ++ + S LD + + G A A ++ GG + A +L RA+ E ++P+ E++V ++ AD ERRA L +R +R+ P T+CC+ HC+ CR H Q+C +Y G ++ C C + + KGDGCDS++CICGH FSWS E+ R R A++
Sbjct: 69 CRGCLDHYFSGVVTGAVIGSCPRVACLYHHARTVPAHRWARVVAKPDELKERHAKAARDALSFQCGSCHARRSLYLEEETANVDS--LDAGLCHVLGGTAEVK----------------AAVREYNEGGMTAEDLYALLAAKLPPLRAAAENPHGSDVVEPA------------------------EVIVDAVARCVADPERRAALQLRHLRTVPRFRTRCCRVEHCFNCRTRAWHGSQSCAEYARKANASGRVELVTCFKCDLQLTKGDGCDSVTCICGHAFSWSSRVEEMATMRRERRAES 329 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig90.18322.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig90.18322.1 >prot_Ecto-sp6_S_contig90.18322.1 ID=prot_Ecto-sp6_S_contig90.18322.1|Name=mRNA_Ecto-sp6_S_contig90.18322.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=1353bp MITPLVAQTYARLPPSLSLPFSLRCPRLSAPHTGCPQRRRHLRCTSTMMRback to top mRNA from alignment at Ecto-sp6_S_contig90:84339..95907+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig90.18322.1 ID=mRNA_Ecto-sp6_S_contig90.18322.1|Name=mRNA_Ecto-sp6_S_contig90.18322.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=11569bp|location=Sequence derived from alignment at Ecto-sp6_S_contig90:84339..95907+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig90:84339..95907+ >mRNA_Ecto-sp6_S_contig90.18322.1 ID=mRNA_Ecto-sp6_S_contig90.18322.1|Name=mRNA_Ecto-sp6_S_contig90.18322.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=4059bp|location=Sequence derived from alignment at Ecto-sp6_S_contig90:84339..95907+ (Ectocarpus species6 EcLAC_371)back to top |