mRNA_Ecto-sp6_S_contig9.18318.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig9.18318.1
Unique NamemRNA_Ecto-sp6_S_contig9.18318.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
[Close]
BLAST of mRNA_Ecto-sp6_S_contig9.18318.1 vs. uniprot
Match: D7FV78_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV78_ECTSI)

HSP 1 Score: 560 bits (1444), Expect = 2.440e-201
Identity = 289/295 (97.97%), Postives = 293/295 (99.32%), Query Frame = 1 
Query:    1 MPPP-QHAEGFHDKDARASAGNAGGGARPSDVSVPAGGNGTNAAAAVYAKPLTDKEMLAADEAKDKLDRMVKVEALVGKRKRFFSYLKKTHEEGGFWLNCVQLTRQGDLAVYAAELSSQRILRLFYLGVGLAKLLQSKGGLELIRGILQLLEEWEYHFALAGVAHHSVKAMLAKNIDNIDHSARGRDASEEGGGKHQEQIVARLKKFNNEVVYENLLTPEVPFALDYLEVVFSLCEVMCRIYAKFVEEECYKNAFVYDGLVKVDNKIKHHIINVFAKEFTDMSTNIAKDELKTLR 882
            MPPP QHA+GF DKDARASAGNAGGGARPSDVSVPAGGNGTNAAAAVYAKPLT+KEMLAADEAKDKLDRMVKVEALVGKRKRFFSYLKKTHEEGGFWLNCVQLTRQGDLAVYAAELSSQRILRLFYLGVGLAKLLQSKGGLELIRGILQLLEEWEYHFALAGVAHHSVKAMLAKNIDN+DHSARGRDASEEGGGKHQEQIVARLKKFNNEVVYENLLTPEVPF+LDYLEVVFSLCEVMCRIYAKFVEEECYKNAFVYDGLVKVDNKIKHHIINVFAKEFTDMSTNIAKDELKTLR
Sbjct:    1 MPPPLQHAQGFQDKDARASAGNAGGGARPSDVSVPAGGNGTNAAAAVYAKPLTEKEMLAADEAKDKLDRMVKVEALVGKRKRFFSYLKKTHEEGGFWLNCVQLTRQGDLAVYAAELSSQRILRLFYLGVGLAKLLQSKGGLELIRGILQLLEEWEYHFALAGVAHHSVKAMLAKNIDNLDHSARGRDASEEGGGKHQEQIVARLKKFNNEVVYENLLTPEVPFSLDYLEVVFSLCEVMCRIYAKFVEEECYKNAFVYDGLVKVDNKIKHHIINVFAKEFTDMSTNIAKDELKTLR 295
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BLAST of mRNA_Ecto-sp6_S_contig9.18318.1 vs. uniprot
Match: A0A836CEB8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEB8_9STRA)

HSP 1 Score: 246 bits (628), Expect = 2.700e-78
Identity = 129/228 (56.58%), Postives = 161/228 (70.61%), Query Frame = 1 
Query:  205 MVKVEALVGKRKRFFSYLKKTHEEGGFWLNCVQLTRQGDLAVYAAELSSQRILRLFYLGVGLAKLLQSK-GGLELIRGILQLLEEWEYHFALAGVAHHSVKAMLAK-NIDNIDHSARGRDASEEGGGKHQEQIVARLKKFNNEVVYENLLTPEVPFALDYLEVVFSLCEVMCRIYAKFVEEECYKNAFVYDGLVKVDNKIKHHIINVFAKEFTDMSTNIAKDELKTLR 882
            M K++ALV KRK  F YLKKTHE G +WLNCVQL R+ DL  YAAE+   R  +LFYLG+ LA+LLQS  GG  ++RG LQL EEWEYHFA  G A  SV+ ++AK N         G   S  GGG+    +VARL KF +E+VYE+LLTP +PFALDY EV FSLC+++C++Y K +EEECY N  V++ LVKVD K+K H++NV AKEFT+MS  IA+ EL  LR
Sbjct:    1 MTKLQALVEKRKSSFVYLKKTHEGGCYWLNCVQLNRKPDLEAYAAEIPRARTTQLFYLGLSLARLLQSGCGGAAVVRGALQLFEEWEYHFA--GNAAQSVRGLMAKVNTQTQGQGVEG-GGSASGGGEDNNPVVARLCKFGSEMVYEHLLTPPLPFALDYFEVFFSLCDIICQVYNKLMEEECYSNVHVFEALVKVDAKVKRHVLNVTAKEFTEMSAKIARSELAALR 225
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BLAST of mRNA_Ecto-sp6_S_contig9.18318.1 vs. uniprot
Match: A0A7S3MFY2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MFY2_9STRA)

HSP 1 Score: 164 bits (416), Expect = 3.230e-44
Identity = 90/232 (38.79%), Postives = 136/232 (58.62%), Query Frame = 1 
Query:  193 KLDRMVKVEALVGKRKRFFSYLKKTHEEGGFWLNCVQLTRQGDLAVYAAELSSQRILRLFYLGVGLAKLLQSKGGLELIRGILQLLEEWEYHFALAGVAHHSVKAMLAKNIDNIDHSARGRDASEEGGGKHQEQIVAR--LKKFNNEVVYENLLTPEVPFALDYLEVVFSLCEVMCRIYAKFVEEECYKNAFVYDGLVKVDNKIKHHIINVFAKEFTDMSTNIAKDELKTLR 882
            KL R  +++A++ KR+R  +YLKK H+ G +WLN + LT    LA     +S QR+   F LG+ ++K+++   GL ++R   QL+EEWEY    +G    SVK M+AKN   +       +   +         +AR  + KFNN VV+E+L  P +PF LDYLEV   LC  + ++Y K + EECY N  +YD +V++D ++KHHIIN+ +KE TD  +   K   ++LR
Sbjct:   42 KLQRKQRLQAMIIKRQRNLAYLKKVHQGGCYWLNTILLTHADLLAYSTKFVSKQRVESFFSLGISISKIVELNAGLPVVRAFSQLMEEWEY--VHSGTTMQSVKFMMAKNSTCVYPQMSPIEGFSD---------LARPSVYKFNNAVVFEHLRLPHIPFELDYLEVFTGLCVELSKLYEKLIHEECYANQIIYDTIVRLDTRVKHHIINLVSKEVTDACSAKMKSNTRSLR 262
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BLAST of mRNA_Ecto-sp6_S_contig9.18318.1 vs. uniprot
Match: A0A7R9Y7M0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y7M0_9STRA)

HSP 1 Score: 154 bits (389), Expect = 6.900e-42
Identity = 80/204 (39.22%), Postives = 125/204 (61.27%), Query Frame = 1 
Query:  205 MVKVEALVGKRKRFFSYLKKTHEEGGFWLNCVQLTRQGDLAVYAAELSSQRILRLFYLGVGLAKLLQSKGGLELIRGILQLLEEWEYHFALAGVAHHSVKAMLAKNIDNIDHSARGRDASEEGGGKHQEQIVARLKKFNNEVVYENLLTPEVPFALDYLEVVFSLCEVMCRIYAKFVEEECYKNAFVYDGLVKVDNKIKHHIIN 816
            + + EALV KR   F+YLK+ H EGG+WLN V LT+         E+S  RI +LF+LGV L K+L  + G  +++ +LQL EEWEY   +AG     VK ++AK+      SA+    +       ++ + A L +F++EV+YE L  P++   +DY E++ SLCE +  +Y KF+E +CY NA ++D L+++D K+K H++N
Sbjct:   63 LAQTEALVAKRTDNFAYLKELHAEGGYWLNVVLLTKSILEDFVRREVSKARIEQLFFLGVSLGKILDIQSGPTVLQAVLQLFEEWEYW--MAGSTTQGVKWVMAKS------SAKPHPTTAAVPSSPEDAVKAGLYRFHSEVIYERLCLPQLSIEIDYFELIISLCETLTLLYKKFLESDCYSNALLFDALMRMDAKVKQHLVN 258
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BLAST of mRNA_Ecto-sp6_S_contig9.18318.1 vs. uniprot
Match: A0A7S2CN58_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CN58_9STRA)

HSP 1 Score: 130 bits (326), Expect = 8.600e-34
Identity = 70/161 (43.48%), Postives = 100/161 (62.11%), Query Frame = 1 
Query:  400 LQSKGGLELIRGILQLLEEWEYHFALAGVAHHSVKAMLAKNIDNIDHSARGRDASEEGGGKHQEQIVARLKKFNNEVVYENLLTPEVPFALDYLEVVFSLCEVMCRIYAKFVEEECYKNAFVYDGLVKVDNKIKHHIINVFAKEFTDMSTNIAKDELKTLR 882
            L    G   +  + QL++E+EYHFA +  A   V+   A+N + +      R+  E+   K      A L +F NEVVY +L TP V F LDY EV+FSLC+V+  +Y KFV+EE ++N+ V+D LVK D++IKHH+IN+ AKE TD+ST I ++E   LR
Sbjct:    1 LDMPAGAVTVEALWQLIQEYEYHFANS--AMQMVRYTTARNSECVYPQLNPREEGEDEAAK------ANLYRFGNEVVYLHLQTPHVAFELDYREVLFSLCDVLSLLYNKFVDEEIWQNSAVFDMLVKADSRIKHHVINLLAKELTDLSTQILRNEFSALR 153
[Close]
BLAST of mRNA_Ecto-sp6_S_contig9.18318.1 vs. uniprot
Match: A0A8K1C382_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C382_PYTOL)

HSP 1 Score: 130 bits (328), Expect = 2.170e-31
Identity = 83/229 (36.24%), Postives = 127/229 (55.46%), Query Frame = 1 
Query:  202 RMVKVEALVGKRKRFFSYLKKTHEEGGFWLNCVQLTRQGDLAVYAAELSSQRILRLFYLGVGLAKLLQSKGGLE-LIRGILQLLEEWEYHFALAGVAHHSVKAMLAKNIDNIDHSARGRDASEEGGGKHQEQIVARLKKFNNEVVYENLLTPEVPFALDYLEVVFSLCEVMCRIYAKFVEEE-CYKNAFVYDGLVKVDNKIKHHIINVFAKEFTDMSTNIAKDELKTLR 882
            RM  +E LV  R+  +SYLK  HE    WLN   L     LA    + S +R ++ FYLG+GL +L+      + L     QLLEE E++F+ A V   S+K M+A +   +       D  +EG     E     + K+N   V+  LLTP +PF LDY EV+ SLC+++  +Y+KFVE+  C +N F++  +V+ D KIK  +I+   KEF+ ++ ++  DEL ++R
Sbjct:  177 RMHILEELVQHRRHDWSYLKAMHEGTNHWLNIAVLRESQVLAHLGEKQSIRRSVQFFYLGLGLGRLISDVRHAQFLAMEGCQLLEELEFYFSSATV--QSMKLMVATSTPTLHQPLHKMD--DEGIYSVDEPFRPTIYKWNQRPVFRRLLTPSIPFPLDYREVMLSLCDILALVYSKFVEDNICSENIFLFQAIVRFDEKIKKLVIDPVKKEFSAVAASVLNDELTSVR 401
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BLAST of mRNA_Ecto-sp6_S_contig9.18318.1 vs. uniprot
Match: A0A4D9CUK2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CUK2_9STRA)

HSP 1 Score: 124 bits (310), Expect = 5.600e-30
Identity = 88/260 (33.85%), Postives = 135/260 (51.92%), Query Frame = 1 
Query:  202 RMVKVEALVGKRKRFFSYLKKTHEEGGFWLNCVQLTRQGDLAVYAAELSSQRILRLFYLGVGLAKLLQ----------SKGGLEL--------------------IRGILQLLEEWEYHFALAGVAHHSVKAMLAKNIDNIDHSARGRDASEEGGGKHQEQIVARLKKFNNEVVYENLLTPEVPFALDYLEVVFSLCEVMCRIYAKFVEEECY---KNAFVYDGLVKVDNKIKHHIINVFAKEFTDMSTNIAKDELKTLR 882
            R V+++ALV KR     Y++K HE G +WL+ V L++        +++ S R +  F+LGV ++ LL+          S GG E                     +R + QL EE EYH +   +   ++K +LAK+ID    +     A EE        I  R+ +F+NEVV++N   P +PF LDYLEV+ SLC  +  +Y +          ++A +++ LVK+D K+KHHIIN  AKE T ++T +AK EL+  R
Sbjct:   38 RHVQLQALVEKRILNLDYIRKVHEGGQYWLHTVLLSQNVIHHYVRSQVPSSRAIVFFHLGVSVSPLLEAPSALRPHPHSGGGSESAAVSEGEERRCSGKEECIAQLRSLAQLFEEMEYHTSTGAL--QAMKFLLAKSID----TPFPEQAPEE-------PINPRIFRFSNEVVFKNFGAPYIPFPLDYLEVLDSLCHTLALLYRQLGHRHAASLERDAALFEVLVKIDAKVKHHIINPIAKELTSLATRLAKQELEGWR 284
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BLAST of mRNA_Ecto-sp6_S_contig9.18318.1 vs. uniprot
Match: A0A484EBJ4_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EBJ4_BRELC)

HSP 1 Score: 117 bits (293), Expect = 1.040e-26
Identity = 73/229 (31.88%), Postives = 122/229 (53.28%), Query Frame = 1 
Query:  202 RMVKVEALVGKRKRFFSYLKKTHEEGGFWLNCVQLTRQGDLAVYAAELSSQRILRLFYLGVGLAKLLQSKGGLELIR-GILQLLEEWEYHFALAGVAHHSVKAMLAKNIDNIDHSARGRDASEEGGGKHQEQIVARLKKFNNEVVYENLLTPEVPFALDYLEVVFSLCEVMCRIYAKFVEEE-CYKNAFVYDGLVKVDNKIKHHIINVFAKEFTDMSTNIAKDELKTLR 882
            RM  +E L+  R+  ++YLK  HE   +WLN   L  Q  L     +  S+R  + FYLG+GL KL++     EL+     QLLEE E+ FA   V   S+K M+A +    D       ++EE            + K+N   +Y  L+TP +PF LDY EV+ SLC+++  +Y+K +E+    +N  ++  +++ DN+I+  +I+   KEF  ++  +  +E++ +R
Sbjct:  141 RMKILEELIQHRRFDWNYLKTMHEGSNYWLNIALLREQQVLQYIGKKPRSRRSAQFFYLGLGLGKLVEETPHPELLAMNCCQLLEELEFFFASTAV--QSMKMMVATSSTLYDKENFDAYSTEEA-------FRPSVYKWNQRPMYRRLMTPPIPFPLDYREVLLSLCDILALVYSKLIEDNGASENIHLFQSILRFDNRIQKLVIDPIKKEFAAVAAQVVAEEMRLVR 360
[Close]
BLAST of mRNA_Ecto-sp6_S_contig9.18318.1 vs. uniprot
Match: K3WIZ2_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WIZ2_GLOUD)

HSP 1 Score: 115 bits (288), Expect = 1.550e-25
Identity = 78/229 (34.06%), Postives = 125/229 (54.59%), Query Frame = 1 
Query:  202 RMVKVEALVGKRKRFFSYLKKTHEEGGFWLNCVQLTRQGDLAVYAAELSSQRILRLFYLGVGLAKLLQSKGGLE-LIRGILQLLEEWEYHFALAGVAHHSVKAMLAKNIDNIDHSARGRDASEEGGGKHQEQIVARLKKFNNEVVYENLLTPEVPFALDYLEVVFSLCEVMCRIYAKFVEEE-CYKNAFVYDGLVKVDNKIKHHIINVFAKEFTDMSTNIAKDELKTLR 882
            RM  +E LV  R+  +SY+K  HE   +WLN   L  Q  LA    + + +R ++ FYLG+GL +L+      + L     QLLEE E++FA + V    +K M+A +  +  H    RD  E     H E     + K+N   V+  L+TP +PF LDY EV+ SLC+++  IY+K VE+    +N  ++  +++ D KIK  +I+   KEF+ ++  +  DE+ ++R
Sbjct:  222 RMQILEDLVQCRRSDWSYIKAMHEGTNYWLNIALLREQQVLAHLGEKQTIRRSVQFFYLGLGLGRLISEFNHPQFLAMEGCQLLEELEFYFASSAV--QGMKLMVATS--STLHEPCERDDEESRYSLH-EPFRPTIYKWNQRPVFRRLVTPPIPFPLDYREVMLSLCDILAIIYSKLVEDNNSSENIHLFQAIIRFDEKIKKLMIDPVKKEFSAVALQVLTDEIASVR 445
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BLAST of mRNA_Ecto-sp6_S_contig9.18318.1 vs. uniprot
Match: A0A3R7JNW3_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JNW3_9STRA)

HSP 1 Score: 110 bits (275), Expect = 2.430e-25
Identity = 71/227 (31.28%), Postives = 121/227 (53.30%), Query Frame = 1 
Query:  214 VEALVGKRKRFFSYLKKTHEEGGFWLNCVQLTRQGDLAVYAAELSSQRILRLFYLGVGLAKLLQSKGGLELIR-GILQLLEEWEYHFALAGVAHHSVKAMLAKNIDNIDHSARGRDASEEGGGKHQ--EQIVARLKKFNNEVVYENLLTPEVPFALDYLEVVFSLCEVMCRIYAKFVEEE-CYKNAFVYDGLVKVDNKIKHHIINVFAKEFTDMSTNIAKDELKTLR 882
            +E LV  R+  ++YLK  HE   +WLN   L  Q  +     +   +R  + FYLG+GL +L+      EL+     QLLEE E++F+ A V    +K M+A +      S       +E   ++   E     + K+N   VY  L+TP +PF LDY EV+ SLC+++  IY+K +E+  C +N  ++  +++ D +IK   I+   KEF+ +++ +  +E++ +R
Sbjct:    4 LEDLVQHRRSDWNYLKTMHEGSNYWLNVALLREQQMMNHLGDKQIIRRGAQFFYLGIGLGRLVGESLHPELLAMDCCQLLEELEFYFSSATV--QGMKMMVATS------STLHEPLDDENSPQYSVDEAFRPAMHKWNQRPVYRRLMTPPIPFPLDYREVLLSLCDILALIYSKLIEDSVCSENLNLFQAIIRFDERIKKLFIDPVKKEFSAVASQVIAEEMRLVR 222
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18318.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FV78_ECTSI2.440e-20197.97Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CEB8_9STRA2.700e-7856.58Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3MFY2_9STRA3.230e-4438.79Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7R9Y7M0_9STRA6.900e-4239.22Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S2CN58_9STRA8.600e-3443.48Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A8K1C382_PYTOL2.170e-3136.24Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A4D9CUK2_9STRA5.600e-3033.85Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A484EBJ4_BRELC1.040e-2631.88Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
K3WIZ2_GLOUD1.550e-2534.06Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A3R7JNW3_9STRA2.430e-2531.28Uncharacterized protein n=2 Tax=Phytophthora kerno... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig9contigEcto-sp6_S_contig9:2985405..2992327 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score565.1
Seed ortholog evalue2e-158
Seed eggNOG ortholog2880.D7FV78
Model size885
Hectar predicted targeting categoryother localisation
Exons7
EggNOG OGs2ADY6@1,2RYUG@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-14_000090.1
Cds size885
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig9.18318.1prot_Ecto-sp6_S_contig9.18318.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig9 2985405..2992327 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350550.777046-CDS-Ecto-sp6_S_contig9:2985404..29855481682350550.777046-CDS-Ecto-sp6_S_contig9:2985404..2985548Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 2985405..2985548 -
1682350550.7864652-CDS-Ecto-sp6_S_contig9:2985856..29860031682350550.7864652-CDS-Ecto-sp6_S_contig9:2985856..2986003Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 2985857..2986003 -
1682350550.794448-CDS-Ecto-sp6_S_contig9:2987068..29872571682350550.794448-CDS-Ecto-sp6_S_contig9:2987068..2987257Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 2987069..2987257 -
1682350550.802293-CDS-Ecto-sp6_S_contig9:2988307..29883971682350550.802293-CDS-Ecto-sp6_S_contig9:2988307..2988397Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 2988308..2988397 -
1682350550.8099756-CDS-Ecto-sp6_S_contig9:2988863..29889651682350550.8099756-CDS-Ecto-sp6_S_contig9:2988863..2988965Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 2988864..2988965 -
1682350550.817753-CDS-Ecto-sp6_S_contig9:2990183..29902901682350550.817753-CDS-Ecto-sp6_S_contig9:2990183..2990290Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 2990184..2990290 -
1682350550.8253722-CDS-Ecto-sp6_S_contig9:2992221..29923271682350550.8253722-CDS-Ecto-sp6_S_contig9:2992221..2992327Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 2992222..2992327 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig9.18318.1

>prot_Ecto-sp6_S_contig9.18318.1 ID=prot_Ecto-sp6_S_contig9.18318.1|Name=mRNA_Ecto-sp6_S_contig9.18318.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=295bp
MPPPQHAEGFHDKDARASAGNAGGGARPSDVSVPAGGNGTNAAAAVYAKP
LTDKEMLAADEAKDKLDRMVKVEALVGKRKRFFSYLKKTHEEGGFWLNCV
QLTRQGDLAVYAAELSSQRILRLFYLGVGLAKLLQSKGGLELIRGILQLL
EEWEYHFALAGVAHHSVKAMLAKNIDNIDHSARGRDASEEGGGKHQEQIV
ARLKKFNNEVVYENLLTPEVPFALDYLEVVFSLCEVMCRIYAKFVEEECY
KNAFVYDGLVKVDNKIKHHIINVFAKEFTDMSTNIAKDELKTLR*
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mRNA from alignment at Ecto-sp6_S_contig9:2985405..2992327-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig9.18318.1 ID=mRNA_Ecto-sp6_S_contig9.18318.1|Name=mRNA_Ecto-sp6_S_contig9.18318.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=6923bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:2985405..2992327- (Ectocarpus species6 EcLAC_371)
ATGCCTCCTCCTCAGCATGCTGAGGGATTTCACGATAAGGATGCCCGGGC
TTCTGCAGGAAATGCTGGTGGAGGAGCTCGACCCAGCGATGTTTCAGTCC
CAGCAGGTGTGTCGCGTCTTGAAAATGCTACCTTGAAAACGTTTGCCACT
GCTGCTGTTGCGCTTCGGCTACTGGTGTAGGCAGACCTCTGTTTTCTCTC
TCTTGTTTTTCTTCAAAGTACTCCTCATCTTCCTGCTGATGTTGTAGGCT
GATTCCTCTTGACGGGCTCACGCAAGCCTGTAGGTCGGTGTTCAGTGAAC
TTCCTTGCTTGTAGTCAGCTCTGGTTGACCTATTGAAGCACTGGCTGGGG
CCCGAAAGCCTCGCAAAACAGGTCTACATGTAGGATCGAGCCGATAAGCT
GTCGGTCAGCAAGTGCATGTCGGCGGAATTTGCAGCTGGAAGTTTGGAAG
TTCGCGTTTGGCGTGTATTTCAACCAAATGCCGGCAATCTGTCTGCGTAC
TCTGTAGTTGCGGTCGCCTTTGTGATCCGTATACTGCTGTTGCGCACTGC
TGTTGCGCGTACATGTACGAATCTGGTTTTCAGGAGAGAACCACGTCCCG
TTGTCGACGGGGCTTCGGATGTACCGATACATATCCTATGCATACTCTAA
CCCTATTTTTGAGTTACCGTATATGACACAAGATAACACACCCCCTGGAC
CGATTTTCAGAGCTCGATTACTTCACGACCAAGAAGATGCATGGACGAAA
GGATACATTTTCAGAGAGCTGTCGACCAGACGGCTTCAACGCCGCCGTTT
TCGGCCCTGCGACTGTTGCTGCTGTTGAAAAATCGAGCTTTGAAAATCGG
TCCAGGGGGTATGTCATCTTGTGTCATATACGGTACATGTACCGCCACGA
CGGCAACTGCGGACGCTGCTGCACTCGCTGGCGTGGCTTGGTTGTTACTC
CCTCACGAGCGTGGGTACAGCAGCAGTCATGCATGCAGCACATCGAACCA
CGTTCACCTGCTAATAGTACTGCTGCACTATTGGTATCGTTCAGCAGGTT
ATCAACACGATTGGGGGATGAGTGTATGTATGCTGTGGGTCGAGGTACAG
CAGTATGTATGCAGGATATGTTCAAATAGTGTTGTACGGCCAGGGACAGA
TACAACGATGTCCGCGCGCACTATCCAACTCGATGAGATGCTATTCGCTC
GCTGTGTGTTCCCAGGGTGCAGCTGCGCCAGATAGGGAACATGCAGCACG
ACCGCTATTTGTTGTAATAGCCCGCAACGCTTCGACCATTCGAGCGGCGA
ACGCATTTATGCTGAAAGCAGGATACCCCGAGAGAGATAGTGCCGGGCGA
GCCCGCAAAGGTTGCAAGGGAGTTTGTGATGGTGCAGACCAGGCCGGTAT
CAATCATCTCAATGACGATGGCGATGGCGATGGTGATGCCACACCTTGTG
TTCCCAAATACACCGCGTGTTCGGGAGCGGGTGAAGCTTCTCTGCACTCC
CATTCGCCATGACTGCACCTTTCACTGCTGTCGCTGCTGCTGTACTTTAC
AACAGCTGTGTTTTCTCTCTCCCTAAGTACTGCTTCCATGTGTCGTGGTG
ATTCGGGCTGCGAAGCAACAGCAACAACTAACTCTCTTCGGATTTCAGAC
ACAATTGTACGATGGCGCAGGGTGTCCTCCGTCCGTGGTATCGTAGAGAC
GATTCCAACACTGCTGTCAGACGTACACCAGTATTGTACGAGTCATGACT
TGGTTGTTGGCGCTACCTCTCGCGGCTGCTTTCTAGCTGCGTTGCTTGAA
ATACATATGCCCACCATAGTGGACTCGGCGAAGGTACGGCAGTATCATAC
TTCCAAACGACTTCGCGGATGATATTCGACAATTCTTAAGAGAAGGGGGG
AGGGGGCGGACGTACTCAAACTTGTAGACCATCTTGAGTCAGTCAACGCC
CAGCTTTGGCTTGGTTGTTCCGACACGATTAGCTGTTTCGACTTCCCTCC
TGTCGTGCTCCTGTCATGTCCTGTCCTCTTTGTTCAGGAGGCAACGGGAC
CAATGCTGCTGCTGCCGTCTATGCCAAGCCCCTAACCGACAAGGAAATGT
TGGCTGCCGACGAAGCCAAGGACAAACTGGATAGGATGGTCAAGGTACAG
TACGTGCTTGTCTGGTGTCTAACGCGGCACGTGTTTCCCCGATGTCCGCC
ACTACCATCATGTTGATGGAGCTCTTCTACTTTTATAAGCCTTCGGCGCT
GGTTGCCGCCTGTGAATTCCGTGTGTCCTACACGCGTGGACCCATCGAAG
TTGGGAATATGCCGCGAGCGCGGTGAGAGATGGCCGTGTGGAATGGATCA
AGGGAAGTCGGCACTGCTGATCGGTGTGTCGTTTTTGGCGAATGCAACAC
CGTTTCAGGAGTCTGTCTACTAATGTGTGCTATTTCGGAGCTCTGGTTGA
CTGTTTCTGCCCGTCGGCTTGTACATGACCGTTGTCGCTGTATGTACCAA
GTATGCATACGGCTGCTGTCGTGTAGTTGTTGATAGCCTGTAAAAACAAT
TTCTACTGTATCCTTGCACCACAGGACGTACACATCCGGTGGGCTTTTTG
TACATTACCGGCAGACCCGCAGGCTTGATTAGCATTATAAGCAGACACCC
ACGCCATGCCGATGCTGTAGCCATGTGGCCAGTGCGTTGATCATGTGCAC
AAGACGCCTGCGGTGTGTCGATCGTGTCCTACCCCTACATTACCGTGTCT
ACATTGAAGATGACAGATAGTCTACATGGACTAGGGGTTGTTGCTCGAGA
GGATGTACGTGCTGCATGTATGGACTTGTTCTCCTTTCCCATCTTGCGAG
ATATAATGAGATCATTAAGTTGCTGAGCCAAGACAATAAGTGCTGTCTGT
AATCTGCATCTTAATAGGTGCTTTCGCTAATCGCTGTGCTGTGTGTTGGT
CCCATCCAATCTGGCACCAGTCTACAGACCACTTTGTGGGCTGTGGCAAT
GGTCATTTTCACACTCCAACCCGCTCTCTCTCTAACCATGGCGACGTGGT
TGGTGCAGACCAAGCTTGTCTTCTTAGACACCGCAGGCATGGCTTACGCG
AGATTTTAGCCATGCATTGGCCGATACTTCGAGCACCTTAAGAATCTCAT
AAGGACTAAGTAGAGTTGTGTAGTAGGGTAGTCGTACGTGGAACGTGAGG
GTGGTCGCGTGCCACCACACATACGGCTGAACGATTCCTTGGAACGCATG
CATGTAGCTTATAATTTTTCTGAATCTCTCGACAATCGGCACCGAGCTCG
GGCTCTAACCTCGTTACTCGCTCGCACCATCATGTTGTTTTGCACCTTTT
TTTTTTTCGTAGGTGGAGGCCTTGGTAGGCAAGCGAAAACGTTTCTTTTC
TTACCTCAAGAAGACACACGAGGAGGGCGGCTTCTGGTTGAACTGCGTTC
AGCTCACGCGGCAGGTATGCAACCACGACCATGAGGCTTGGCTTGAGTTG
ATGTGTCTGGCTACAAAAGAAGTGTCACTTGGAGAGTTTTGTTGCGAATG
GTTGGCGGTGTTGGCGTAACTGTTGCCGATCAGTCTGGTCAACCCTTCCG
TTGGTTTGATGCTTTCGGGTGATTTGGAGGTCAACAGGACGACACGTCAT
CAAAATCGGTACCTTGCACAGCTGTTGCGGGGGGTGGAGATTTCGCAGCG
CACCAAATCATGGAAGCATGCGCTCAATGGAACACCTGATAGGTGCCACG
CTGAGAGTGTGTCGAGTATGGCAAACAAGCAGCGTTGCACCCCGATGGCC
ATCAACCACATTACTGTACGATTCGCTTGTTGGGTAGTCGATGCGTCGGG
TGTCATGATCGTCCAGAGCACTTGACTGACACCGACGTTTTTGCGTCGAA
TACTGCAACTACTTCTGCAACTATCTGCAGGGGGATCTGGCTGTGTATGC
CGCAGAGTTGTCGTCGCAGCGCATCCTTCGGCTTTTCTACCTCGGCGTCG
GGCTGGCCAAGCTCTTGCAGGTCAGGAATACCACATCTTCGGCCGCATGG
GGTGCTGCCTGCGGTGCCCCGTCCTGATGCTGTGTATGTACTTGAGTGTA
CTTGAGTTGCGACAAGTCAGGCAGAACAATCGTGGTATGCAGAAGTGTGA
CCCCAAACAGTGACGAAGCTTGTATTCGTGTTATGTTTTGTGCGTTAACA
AAGGTGCCCTTGTTCCGAAGCTCTATGAGTATAAGACTCTGTTACGGTTA
GGGTTAGGGATTGGGTGGTTCAGTAGGGTTGGACTCCCTTACCAGGAGGT
GAATTTGACAGGTGTTAAGCCTGTTGGGATTGGGACCTCTTCATCTCGCC
TCTTGATTGCGATTTTGACTTGACGGGACAGAGGACCGTCGTGGTAAACT
CGCTCGCTGGCGCCGTTTGTGTACGTGTTGCACCTTGCACCCTAACGTCC
CATCCCATCCCATCCCATCCCATCCTGTACCCTGTTTTTATTTGACAACA
TGGCTTCACCTTCGTGTTCATGTCAGAGTCTGGCCCTTTTGCTGAACTTG
CCAGACTAGCCCCATAGTACACGCCAGCATACGTACTCGTGGATACGTTA
AACCGTATGCGCACTTGTTTTTTCACCGGCCATGCATGGACAGCAGTCGG
GGGAACTGCTGTGCAGGCGGCCTGCTTGGTGCGAGCCAGTGTTGTAAACC
TTGTCAGTTACTGCACTATGGCATTTCGTGAAATTGCACATAGATACAAC
CCGCATGCACACAAAAATCAAAAAAATCTGCCCCCCATGCGGCCCCTCTG
TGTTGCTCCTCTGTGCTTGTAAAGGCAGGATGTTACCTTGCCTACAAAGC
TTTTTTGCAAACTTATTTATTTGACAAATGGGCCAAACGGCATCCTCAAT
CCCCTTCCTGCACCCCGTGGACACGCCCCAGACACGCAAAACCAACAACC
AAACCCACAAGTACTTGTCCCTGTGTTGTTTGCCGTGTGATGTACGTATC
GTCTGGCCGCACTGATTTCCTGCCATCGTGTTGACATTTCAACAACGCAA
ACACCAATTTTTTCGTTCAGTCCAAGGGAGGGCTCGAGCTTATCCGAGGG
ATCCTGCAGCTGCTAGAGGAGTGGGAATACCACTTTGCCCTGGCGGGAGT
CGCCCATCACTCTGTTAAGGCCATGCTGGCTAAGAACATCGACAATATTG
ATCACTCAGCGAGGGGGAGGGATGCGAGCGAAGAAGGCGGCGGCAAGCAC
CAAGAACAGGTGAGGCAGTTGCGACGACTTGAAGAACGATCAGAACTGCT
GCTGGTATCTGGTATCTGGTATCTGGTATCTGTGATTCAAATGGTGGTGG
CGTGCGTGCCATTCGGGCTTTTATGCACCATGTGTATCATGTGCGATCGA
TTCAGCACCATCTTTTTTGGTCTACTCGTTTGTTCGATTCGACGGTCTAC
CTAGATACTGTGCGGTCATATTTGTTCTCTTCTTTGCGGTGGCCAACATT
GCTTGCTGAAAGTGCGTAGCAACTCTAATCCAGCCCTTCCCGTTTTGGCG
GTCTACATCTGGGTATGTATCATGAGACTGTCGATACCGTCGAGCGGAAA
GAAGGCCTCTGTTTGTCCCGTGGTTTATCGTTGTCGGTCCGGCCTCGATA
GTTAGAGGTGTGGGGGCTTCCGGTGGCACGAGGCGTTCTCTACCACACTA
TTATACTGTAGTGGCAACAAACAGCAGTGCCGCCTTCGGAGACTTTCGTG
AAATGAAAGTGAAAGTGCAGTTAAAATGAAAGTGAAAGTGAAAGCAAGAG
GTGTCGACTAGGCTACGGTTTAGTCTGTTGATTTGATTGAAGCCCACGTC
TTCTCGTCCCAAGTGTTGGTTGCTGGCTTGTGTGCACAAGACGTGCAACA
ATGGTTTGAGCGCCTCCTCTGTGAGGACTCGGGCGCTGGTTTGTCGTGGC
CGCTCCTCGTGGCTATGTCGGCCGCGACAGGAAGGAAGGAGCACGCGGGG
TGTGCGGCGTGAGACAGTGCGTGCTCCACACACACGCGCGCGTGCGCTGC
GAAACTCGTCTCCGTTTTGTGTCTCGAACAGCATAAAGTGGAATAGGTGC
TACCTCCCGAGCCTTCCACGCGCTGACCTAATGTTTGTTTCACGCCCAAC
CTGTTTGGCTGCTGTTGCTATTCAGATGGTTGTGCCCCGTGCCGCCGCAG
GGTAGGTGCACAGTATCATTCGAAACGATAACAAGGTTACCAGAGGTACT
GCAGTGCGGTAAGGACCGGACATCTGTGGTTTGATTTACAAGTAAACGGC
GTGCGCGCGTATGTTTGCCCTCAGATCGTGGCGCGTCTCAAGAAGTTCAA
CAATGAAGTGGTGTACGAAAACTTGCTGACGCCCGAGGTCCCGTTCGCGC
TGGACTACTTGGAGGTAGTGTTCTCGCTGTGCGAGGTCATGTGCCGCATT
TACGCCAAGTTTGTGGAAGAGGTGAGTAACAGGCAGGCAGACAGACAGAC
GACCATGCATGCTGTGTACAGTACCAGGTATGTATCCAATCTGCCAGAAT
GGGAACTGCAATTGTGCGACATCGTTTTTCATCACTACTGCTTTGCTGTC
ATGACGCCTCATTCAATGCTTGCCGCATCCGATTTTGTGTATCACCCTGT
CCGCGCCTCATGGACTCGTGTCGTGGCGGCGGTGGTGGCCACATGCCCAA
ACATGCAGCATGTCCTCATCGGGAGTGCGGTCGGTCGCGCTGCTTTCTTT
TTGTTTTGCATCCCAACCGTAACCCATAGGAGTGCTACAAGAACGCCTTC
GTGTACGATGGCTTGGTCAAAGTAGACAACAAGATCAAGCACCACATCAT
CAACGTGTTCGCCAAGGAGTTCACCGACATGAGCACCAACATTGCCAAAG
ACGAACTCAAGACCTTGCGCTAG
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig9:2985405..2992327-

>mRNA_Ecto-sp6_S_contig9.18318.1 ID=mRNA_Ecto-sp6_S_contig9.18318.1|Name=mRNA_Ecto-sp6_S_contig9.18318.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=885bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:2985405..2992327- (Ectocarpus species6 EcLAC_371)
ATGCCTCCTCCTCAGCATGCTGAGGGATTTCACGATAAGGATGCCCGGGC
TTCTGCAGGAAATGCTGGTGGAGGAGCTCGACCCAGCGATGTTTCAGTCC
CAGCAGGAGGCAACGGGACCAATGCTGCTGCTGCCGTCTATGCCAAGCCC
CTAACCGACAAGGAAATGTTGGCTGCCGACGAAGCCAAGGACAAACTGGA
TAGGATGGTCAAGGTGGAGGCCTTGGTAGGCAAGCGAAAACGTTTCTTTT
CTTACCTCAAGAAGACACACGAGGAGGGCGGCTTCTGGTTGAACTGCGTT
CAGCTCACGCGGCAGGGGGATCTGGCTGTGTATGCCGCAGAGTTGTCGTC
GCAGCGCATCCTTCGGCTTTTCTACCTCGGCGTCGGGCTGGCCAAGCTCT
TGCAGTCCAAGGGAGGGCTCGAGCTTATCCGAGGGATCCTGCAGCTGCTA
GAGGAGTGGGAATACCACTTTGCCCTGGCGGGAGTCGCCCATCACTCTGT
TAAGGCCATGCTGGCTAAGAACATCGACAATATTGATCACTCAGCGAGGG
GGAGGGATGCGAGCGAAGAAGGCGGCGGCAAGCACCAAGAACAGATCGTG
GCGCGTCTCAAGAAGTTCAACAATGAAGTGGTGTACGAAAACTTGCTGAC
GCCCGAGGTCCCGTTCGCGCTGGACTACTTGGAGGTAGTGTTCTCGCTGT
GCGAGGTCATGTGCCGCATTTACGCCAAGTTTGTGGAAGAGGAGTGCTAC
AAGAACGCCTTCGTGTACGATGGCTTGGTCAAAGTAGACAACAAGATCAA
GCACCACATCATCAACGTGTTCGCCAAGGAGTTCACCGACATGAGCACCA
ACATTGCCAAAGACGAACTCAAGACCTTGCGCTAG
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