mRNA_Ecto-sp6_S_contig9.18312.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig9.18312.1 vs. uniprot
Match: A0A6H5LJB3_9PHAE (Hist_deacetyl domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LJB3_9PHAE) HSP 1 Score: 712 bits (1837), Expect = 7.850e-256 Identity = 347/362 (95.86%), Postives = 355/362 (98.07%), Query Frame = 1
Query: 1 MMRLLAPLKAGSGPLLRAFSSLSADNGTQAGTLFGSLGGMVHKDLPPLVYHERYSADPWPPKHSFPMSKFSDLAELLADTNGPLGDEGPVAMKGAFRPMDRPPHEWFEAVHDPPYYRAFVGGALDEKAIRRIGLPYTEPLVDRTLLEVSGTVLAARLALKFGLACNLAGGTHHAHKGFGSGYTILNDLAVASRVVQADGTASKVTIVDCDVHQGDGTATIFADDASVRTLSFHCQDNFPAVKPASDIDVGFPPGAGDEDLLSALRRVLPHEFAQYPPDLVLYDAGVDMHAGDRLGKMLISDEGLLARDYYVISTWLEMGLPVACVVGGGYDSDRDVLARRHSTVFKAAFQAWREFDMRTNWR 1086
M+RLLAPLKAGSGPLLRAFSSLSADNGTQAGTLFGSLGG+VHKDLPPLVYHERYSADPWPPKHSFPMSKF DLAELLADTNGPLGDEGPVAMKGAFRPMDRPPH+WFEAVHDP YYRAFVGG LD K IRRIGLPYTEPLVDRTLLEVSGTVLAARLALKFGLACNLAGGTHHAHKGFGSGYTILNDLAVASRVVQADGTASKVTIVDCDVHQGDGTATIFADDASVRTLSFHCQDNFPAVKPASDIDVGFPPGAGDEDLLSALRRVLP EFA+YPPDLVLYDAGVDMHAGDRLGKML++DEGLLARDYYVIST L+MGLPVACVVGGGYDSDRDVLARRHSTVFKAAFQAWR+FDMRTNWR
Sbjct: 5 MIRLLAPLKAGSGPLLRAFSSLSADNGTQAGTLFGSLGGIVHKDLPPLVYHERYSADPWPPKHSFPMSKFRDLAELLADTNGPLGDEGPVAMKGAFRPMDRPPHKWFEAVHDPLYYRAFVGGTLDGKVIRRIGLPYTEPLVDRTLLEVSGTVLAARLALKFGLACNLAGGTHHAHKGFGSGYTILNDLAVASRVVQADGTASKVTIVDCDVHQGDGTATIFADDASVRTLSFHCQDNFPAVKPASDIDVGFPPGAGDEDLLSALRRVLPDEFAEYPPDLVLYDAGVDMHAGDRLGKMLLTDEGLLARDYYVISTCLDMGLPVACVVGGGYDSDRDVLARRHSTVFKAAFQAWRDFDMRTNWR 366
BLAST of mRNA_Ecto-sp6_S_contig9.18312.1 vs. uniprot
Match: A0A8J6CHI7_DIALT (Hist_deacetyl domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CHI7_DIALT) HSP 1 Score: 330 bits (846), Expect = 1.860e-106 Identity = 173/306 (56.54%), Postives = 206/306 (67.32%), Query Frame = 1
Query: 139 PLVYHERYSADPWPPKHSFPMSKFSDLAELLADTNGPLGDEGPVAMKGAFRPMDRPPHEWFEAVHDPPYYRAFVGGALDEKAIRRIGLPYTEPLVDRTLLEVSGTVLAARLALKFGLACNLAGGTHHAHKGFGSGYTILNDLAVASRVVQADGTASKVTIVDCDVHQGDGTATIFADDASVRTLSFHCQDNFPAVKPASDIDVGFPPGAGDEDLLSALRRVLPHEFAQYPPDLVLYDAGVDMHAGDRLGKMLISDEGLLARDYYVISTWLEMGLPVACVVGGGYDSDRDVLARRHSTVFKAAFQAW 1056
PLVYH +YS +PWP H F MSKF DL + L LG G + P+D PP EWF AVHD YY F G L A+RRIG ++ LV+RT LE +GTVLAARLAL+ GLACNL GGTHHAH+ FGSG+TILNDLAV++R VQ G A++V IVD DVHQGDGTA+IFA D +V TLSFHC NFP K SD+D+ PPG D+ L+ L VLP PDLVLYDAGVD+ A D LG + +SD+G+ RD YV+ T GLPVA V+GGGY +D D LA RH+ VF+AA W
Sbjct: 9 PLVYHAKYSFEPWPAAHRFRMSKFVDLHDHL------LG-RGIATKEQLHAPIDDPPDEWFTAVHDADYYFGFTDGTLPAPAMRRIGFEWSAQLVERTRLECAGTVLAARLALEHGLACNLGGGTHHAHRDFGSGFTILNDLAVSARYVQNTGLAARVLIVDLDVHQGDGTASIFASDPTVYTLSFHCGKNFPFRKSRSDLDIDLPPGTSDDAYLARLADVLPRVLQVAEPDLVLYDAGVDVAAVDTLGYLDLSDDGIYQRDEYVLRTCRAAGLPVATVIGGGYCTDLDELASRHAIVFRAAQAVW 307
BLAST of mRNA_Ecto-sp6_S_contig9.18312.1 vs. uniprot
Match: A0A6V1V0D3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1V0D3_HETAK) HSP 1 Score: 330 bits (846), Expect = 1.450e-105 Identity = 175/330 (53.03%), Postives = 213/330 (64.55%), Query Frame = 1
Query: 91 GTLFGSLGGMV-HKDLPPLVYHERYSADPWPPKHSFPMSKFSDLAELLADTNGPLGDEGPVAMKGA-FRPMDRPPHEWFEAVHDPPYYRAFVGGALDEKAIRRIGLPYTEPLVDRTLLEVSGTVLAARLALKFGLACNLAGGTHHAHKGFGSGYTILNDLAVASRVVQADGTA-SKVTIVDCDVHQGDGTATIFADDASVRTLSFHCQDNFPAVKPASDIDVGFPPGAGDEDLLSALRRVLPHEFAQYPPDLVLYDAGVDMHAGDRLGKMLISDEGLLARDYYVISTWLEMGLPVACVVGGGYDSDRDVLARRHSTVFKAAFQAWREFDM 1071
G L S G+ +K PP VYH YS PWP H FPM KF L E+L + + +G F P+D PPHEWF VHD YY+ F+ L RRIG LV RT LEV+GT+L A+LAL+ GLACNLAGGTHHAHKG+GSGYTILNDLA+ ++V+Q KV IVD DVHQGDGTA+IF D SV T S HC++NFP K SD+DVG PPG D++ + L+ L ++P DLVLYDAG+D + GDRLG + IS+ GL RD + I T L GLPVACV+GGGYD + LARRHS V +AA +AWRE +
Sbjct: 46 GNLVASRRGVKWNKSSPPFVYHPEYSC-PWPSNHRFPMWKFKGLFEVLCKDH--------IIREGEYFVPLDDPPHEWFTLVHDERYYKGFLDNTLTNDEWRRIGFRPGPGLVRRTRLEVAGTLLTAQLALQHGLACNLAGGTHHAHKGYGSGYTILNDLAITAKVLQESNIGVEKVLIVDLDVHQGDGTASIFEGDPSVFTFSMHCENNFPLRKMRSDLDVGLPPGTDDQEYMRVLQSNLERVLDEFPADLVLYDAGIDPYEGDRLGLLNISERGLYDRDSHTIRTCLGRGLPVACVIGGGYDDNAAALARRHSIVHRAAVRAWREMGV 366
BLAST of mRNA_Ecto-sp6_S_contig9.18312.1 vs. uniprot
Match: A0A0G4EFS8_VITBC (Hist_deacetyl domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EFS8_VITBC) HSP 1 Score: 330 bits (846), Expect = 3.360e-104 Identity = 171/317 (53.94%), Postives = 209/317 (65.93%), Query Frame = 1
Query: 136 PPLVYHERYSADPWPPKHSFPMSKFSDLAELLADTNGPLGDEGPVAMKGAFRPMDRPPHEWFEAVHDPPYYRAFVGGALDEKAIRRIGLPYTEPLVDRTLLEVSGTVLAARLALKFGLACNLAGGTHHAHKGFGSGYTILNDLAVASRVVQADGTASKVTIVDCDVHQGDGTATIFADDASVRTLSFHCQDNFPAVKPASDIDVGFPPGAGDEDLLSALRRVLPHEFAQYPPDLVLYDAGVDMHAGDRLGKMLISDEGLLARDYYVISTWLEMGLPVACVVGGGYDSDRDVLARRHSTVFKAAFQAWREFDMRTNWR 1086
PP VYH Y+ WP H F M KF+ L L + G V+ F P + P W VH+P Y AF+ G LD +RRIG P++ PLV RTLLEVSGT+L A+LA++FGLACNL GGTHHAH +GSG+TI NDLAVA++V+Q A+K+ IVD DVHQGDGTA +FA+D SV TLSFHC+ NFP K SD+DV F G GDE L LRRVLP + PDLVLYDAGVD+ AGD+LG++ IS+ GL RD +VI T ++ +PVACV+GGGYD DR LA RH+ V K A W E R W+
Sbjct: 150 PPFVYHPEYTCPSWPSVHRFKMWKFAALHRHLIEQQG-------VSRDCFFIPPELP-EAWLMMVHEPGYVGAFIEGTLDPMKLRRIGFPWSPPLVRRTLLEVSGTILTAQLAVEFGLACNLGGGTHHAHWDWGSGFTIFNDLAVAAKVIQQQKRANKILIVDLDVHQGDGTAALFANDPSVFTLSFHCEKNFPFRKQKSDLDVSFAAGTGDEQFLDTLRRVLPSLLSSERPDLVLYDAGVDVWAGDKLGELQISERGLADRDRFVIETCMDAHVPVACVIGGGYDDDRHKLAARHAIVHKVASSVWVE---REPWK 455
BLAST of mRNA_Ecto-sp6_S_contig9.18312.1 vs. uniprot
Match: UPI0019D83168 (Histone deacetylase n=1 Tax=Synechococcales cyanobacterium C42_A2020_086 TaxID=2774344 RepID=UPI0019D83168) HSP 1 Score: 317 bits (813), Expect = 1.380e-101 Identity = 164/310 (52.90%), Postives = 199/310 (64.19%), Query Frame = 1
Query: 139 PLVYHERYSADPWPPKHSFPMSKFSDLAE-LLADTNGPLGDEGPVAMKGAFRPMDRPPHEWFEAVHDPPYYRAFVGGALDEKAIRRIGLPYTEPLVDRTLLEVSGTVLAARLALKFGLACNLAGGTHHAHKGFGSGYTILNDLAVASRVVQADGTASKVTIVDCDVHQGDGTATIFADDASVRTLSFHCQDNFPAVKPASDIDVGFPPGAGDEDLLSALRRVLPHEFAQYPPDLVLYDAGVDMHAGDRLGKMLISDEGLLARDYYVISTWLEMGLPVACVVGGGYDSDRDVLARRHSTVFKAAFQAWREF 1065
P+VYH Y A P PP H FPM+KFS L + LLAD+ VA F RPP +W E VH P Y R + G LD KA RRIGLP++ LV+RT + V GT+L ARLAL+ GLACN AGGTHHA +GSG+ I NDLA+A+RV+ ++ IVD DVHQGDGTA IF DD V T S HC+ NFP K SD+DV P G DED L L LP Q PDLVLYDAGVD+H GDRLGK+ +SD GL R+ V++T ++ G PVACV+GGGY D D L RHS + +AA +R++
Sbjct: 4 PIVYHSDYVA-PLPPNHRFPMAKFSRLYDTLLADS---------VAHPAQFHQPRRPPLDWIELVHTPEYVRDYCEGTLDSKAQRRIGLPWSPALVNRTCIAVGGTILTARLALETGLACNTAGGTHHAFPSYGSGFCIFNDLAIAARVLLTQNVVQQILIVDLDVHQGDGTAFIFQDDPRVFTFSMHCEVNFPGTKQRSDLDVPLPTGMEDEDYLQTLADYLPDLLTQVQPDLVLYDAGVDVHLGDRLGKLALSDRGLFCREMQVLTTCVQQGYPVACVIGGGYAEDLDALVYRHSLLHRAASDVYRQY 303
BLAST of mRNA_Ecto-sp6_S_contig9.18312.1 vs. uniprot
Match: A0A2T1FDA4_9CYAN (Histone deacetylase n=2 Tax=unclassified Cyanobacteria TaxID=1983111 RepID=A0A2T1FDA4_9CYAN) HSP 1 Score: 317 bits (812), Expect = 2.020e-101 Identity = 162/311 (52.09%), Postives = 203/311 (65.27%), Query Frame = 1
Query: 139 PLVYHERYSADPWPPKHSFPMSKFSDLAELLADTNGPLGDEGPVAMKGAFRPMDRPPHEWFEAVHDPPYYRAFVGGALDEKAIRRIGLPYTEPLVDRTLLEVSGTVLAARLALKFGLACNLAGGTHHAHKGFGSGYTILNDLAVASRVVQADGTASKVTIVDCDVHQGDGTATIFADDASVRTLSFHCQDNFPAVKPASDIDVGFPPGAGDEDLLSALRRVLPHEFAQYPPDLVLYDAGVDMHAGDRLGKMLISDEGLLARDYYVISTWLEMGLPVACVVGGGYDSDRDVLARRHSTVFKAAFQAWREFDM 1071
P++YHE Y A P PP H FPM+KF L ++L + D VA + F + PP EW E VHD Y +A+ G LD KAIRRIGLP++ L +RT + V+GTVL A+LAL++GLACN AGGTHHA GFGSG+ I NDLA+ASRV+Q G +V I+D DVHQGDGTA IF DD SV T S HCQ NFP K SD+DV G D++ L L + LP + PDLVLYDAGVD H D+LGK+ ++D GL R+ V+ST G PVACV+GGGY D + L RHS + +AA Q +R + +
Sbjct: 4 PIIYHEDYVA-PLPPGHRFPMAKFGMLYQML------IADG--VADRSQFHAPELPPQEWIELVHDRHYVQAYCNGTLDAKAIRRIGLPWSRALANRTFIAVAGTVLTAKLALEYGLACNTAGGTHHAFPGFGSGFCIFNDLAIASRVLQQLGLVRQVLIIDLDVHQGDGTAVIFQDDQSVFTFSMHCQVNFPGTKQKSDLDVHLSEGIEDDEYLQTLAKYLPDLLSDVKPDLVLYDAGVDPHQADKLGKLALTDTGLFRREMQVLSTCCSGGYPVACVIGGGYSDDMNGLVYRHSLLHRAASQTYRHYKL 305
BLAST of mRNA_Ecto-sp6_S_contig9.18312.1 vs. uniprot
Match: K9VMN9_9CYAN (Histone deacetylase n=4 Tax=Oscillatoriales TaxID=1150 RepID=K9VMN9_9CYAN) HSP 1 Score: 315 bits (807), Expect = 1.140e-100 Identity = 164/311 (52.73%), Postives = 200/311 (64.31%), Query Frame = 1
Query: 139 PLVYHERYSADPWPPKHSFPMSKFSDLAELLADTNGPLGDEGPVAMKGAFRPMDRPPHEWFEAVHDPPYYRAFVGGALDEKAIRRIGLPYTEPLVDRTLLEVSGTVLAARLALKFGLACNLAGGTHHAHKGFGSGYTILNDLAVASRVVQADGTASKVTIVDCDVHQGDGTATIFADDASVRTLSFHCQDNFPAVKPASDIDVGFPPGAGDEDLLSALRRVLPHEFAQYPPDLVLYDAGVDMHAGDRLGKMLISDEGLLARDYYVISTWLEMGLPVACVVGGGYDSDRDVLARRHSTVFKAAFQAWREFDM 1071
P++YHE Y A P PP H FPM+KF L ++L L D VA K F + PP EW E VHD Y +A+ G LD KA RRIGLP++ L +RT V+GTVL A+LAL GLACN AGGTHHA FGSG+ I NDLA+ASRV+Q G KV IVD DVHQGDGTA IF DD+SV T S HC+ NFP K D+DV P G D++ L L + LP + PDLVLYDAGVD H GD+LGK+ ++D GL R+ V+ L G PVACV+GGGY D L RHS + +AA QA+R++ +
Sbjct: 4 PIIYHEDYVA-PLPPNHRFPMAKFRMLYQML------LADG--VADKSQFHAPELPPQEWIELVHDHCYVQAYCNGTLDNKAQRRIGLPWSRALANRTCTAVAGTVLTAKLALDCGLACNTAGGTHHAFPAFGSGFCIFNDLAIASRVLQKSGLVRKVLIVDLDVHQGDGTAVIFQDDSSVFTFSMHCEVNFPGTKQKGDLDVPLPVGMEDDEYLQTLDKFLPDLLSSVKPDLVLYDAGVDPHQGDKLGKLALTDTGLFRREMQVLMACLAGGYPVACVIGGGYSDDAKGLVYRHSLLHRAASQAYRQYRL 305
BLAST of mRNA_Ecto-sp6_S_contig9.18312.1 vs. uniprot
Match: A0A3M1SR24_9CYAN (Histone deacetylase n=1 Tax=Cyanobacteria bacterium J055 TaxID=2420338 RepID=A0A3M1SR24_9CYAN) HSP 1 Score: 314 bits (805), Expect = 2.190e-100 Identity = 164/311 (52.73%), Postives = 196/311 (63.02%), Query Frame = 1
Query: 139 PLVYHERYSADPWPPKHSFPMSKFSDLAELLADTNGPLGDEGPVAMKGAFRPMDRPPHEWFEAVHDPPYYRAFVGGALDEKAIRRIGLPYTEPLVDRTLLEVSGTVLAARLALKFGLACNLAGGTHHAHKGFGSGYTILNDLAVASRVVQADGTASKVTIVDCDVHQGDGTATIFADDASVRTLSFHCQDNFPAVKPASDIDVGFPPGAGDEDLLSALRRVLPHEFAQYPPDLVLYDAGVDMHAGDRLGKMLISDEGLLARDYYVISTWLEMGLPVACVVGGGYDSDRDVLARRHSTVFKAAFQAWREFDM 1071
P+V+H Y A P PP H FPM KF L L D +A R P EW E VH P Y A++ G LD KA RRIGLP+TE L +RT + V GT+L A+LA++FGLACN GGTHHA FGSG+ I NDLAVA+R VQ G A KV IVD DVHQGDGTA IF DD +V T S HC+ NFP K SD+DV P G D+D L L LP AQ+ PDLVLYDAGVD HAGDRLGK+ ++D GL R+ V+ST + G PVACV+GGGY D LA RHS + + A +R++ +
Sbjct: 3 PIVHHPDYVA-PLPPGHRFPMGKFGLLYRRLLDDG--------IARPSQIRTPTLPQREWIEWVHHPDYVGAYLEGTLDPKAQRRIGLPWTEALANRTCMAVGGTILTAQLAIEFGLACNTVGGTHHAFPDFGSGFCIFNDLAVAARWVQKHGLAQKVLIVDLDVHQGDGTAVIFQDDPTVFTFSMHCEINFPGKKQRSDLDVALPEGMEDDDYLQTLGEYLPDLLAQFQPDLVLYDAGVDPHAGDRLGKLALTDTGLFRREMQVLSTCVAGGYPVACVIGGGYAEDMAALAYRHSLLHRVASDIYRQYGL 304
BLAST of mRNA_Ecto-sp6_S_contig9.18312.1 vs. uniprot
Match: A0A1C0VLD4_9CYAN (Histone deacetylase n=3 Tax=Limnothrix TaxID=132605 RepID=A0A1C0VLD4_9CYAN) HSP 1 Score: 314 bits (805), Expect = 2.270e-100 Identity = 163/304 (53.62%), Postives = 194/304 (63.82%), Query Frame = 1
Query: 139 PLVYHERYSADPWPPKHSFPMSKFSDLAELLADTNGPLGDEGPVAMKGAFRPMDRPPHEWFEAVHDPPYYRAFVGGALDEKAIRRIGLPYTEPLVDRTLLEVSGTVLAARLALKFGLACNLAGGTHHAHKGFGSGYTILNDLAVASRVVQADGTASKVTIVDCDVHQGDGTATIFADDASVRTLSFHCQDNFPAVKPASDIDVGFPPGAGDEDLLSALRRVLPHEFAQYPPDLVLYDAGVDMHAGDRLGKMLISDEGLLARDYYVISTWLEMGLPVACVVGGGYDSDRDVLARRHSTVFKAAFQ 1050
PLVYH Y A P PP H FPM KF+ L + L A F DRPP +W E VHD Y A+ G LD KA RRIGLP++ L +RT + GTVL ARLAL+ GLACNLAGGTHHA FGSG+ I NDLA+A+RV+QA+G +V IVD DVHQGDGTA IF ++ V T S HC+ NFPA K ASD+DV P G D+D L L R LP AQ PDLV+YDAGVD H GDRLGK+ ++D GL RD V++T + G PVAC +GGGY D L RH+ + +AA Q
Sbjct: 4 PLVYHPDYVA-PLPPGHRFPMQKFARLYDRLRSDG--------TATPEQFHQPDRPPQDWIELVHDRAYVEAYCQGTLDPKAQRRIGLPWSPALANRTCVAAGGTVLTARLALRHGLACNLAGGTHHAFPDFGSGFCIFNDLAIATRVLQAEGLVDRVLIVDLDVHQGDGTAWIFRNEPQVFTFSMHCEANFPARKQASDLDVALPEGMEDDDYLQTLDRFLPDLLAQVRPDLVIYDAGVDPHGGDRLGKLALTDSGLFRRDMQVLTTCVAAGYPVACTIGGGYCDDLAALVDRHALIHRAAAQ 298
BLAST of mRNA_Ecto-sp6_S_contig9.18312.1 vs. uniprot
Match: A0A8J6STH0_9CYAN (Histone deacetylase n=3 Tax=Cyanobacteria TaxID=1117 RepID=A0A8J6STH0_9CYAN) HSP 1 Score: 313 bits (801), Expect = 1.070e-99 Identity = 163/314 (51.91%), Postives = 197/314 (62.74%), Query Frame = 1
Query: 139 PLVYHERYSADPWPPKHSFPMSKFSDLAE-LLADTNGPLGDEGPVAMKGAFRPMDRPPHEWFEAVHDPPYYRAFVGGALDEKAIRRIGLPYTEPLVDRTLLEVSGTVLAARLALKFGLACNLAGGTHHAHKGFGSGYTILNDLAVASRVVQADGTASKVTIVDCDVHQGDGTATIFADDASVRTLSFHCQDNFPAVKPASDIDVGFPPGAGDEDLLSALRRVLPHEFAQYPPDLVLYDAGVDMHAGDRLGKMLISDEGLLARDYYVISTWLEMGLPVACVVGGGYDSDRDVLARRHSTVFKAAFQAWREFDMRT 1077
P VYH Y P PP H FPM KF L + LLAD VA F + PP EW E VH P Y R + G LD KA RRIGLP++ LV RT + V GT+L ARLAL+ GLACN AGGTHHA +GSG+ I NDLA+A+RV+Q G KV IVD DVHQGDGTA IF DD +V T S HC+ NFP K SD+DV P G DE+ L L + LP + + PDLVLYDAGVD H+GDRLGK+ +SD GL R+ V+ST G PVACV+GGGY D + L RHS + +AA + + +++
Sbjct: 4 PFVYHPDYVV-PLPPGHRFPMEKFRRLYQTLLADG---------VASASQFHQPEAPPQEWIELVHTPEYIRDYCEGTLDAKAQRRIGLPWSPALVQRTCIAVGGTILTARLALEHGLACNTAGGTHHAFPSYGSGFCIFNDLAIAARVLQQQGLVQKVLIVDLDVHQGDGTAFIFQDDPTVFTFSMHCEVNFPGTKQTSDLDVPLPVGMEDEEYLQTLAKYLPDLLSGFQPDLVLYDAGVDPHSGDRLGKLALSDRGLFCREMQVLSTCAAQGYPVACVIGGGYGDDFEALVYRHSLLHRAASEVYSSSGIKS 307 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18312.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig9.18312.1 >prot_Ecto-sp6_S_contig9.18312.1 ID=prot_Ecto-sp6_S_contig9.18312.1|Name=mRNA_Ecto-sp6_S_contig9.18312.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=363bp MMRLLAPLKAGSGPLLRAFSSLSADNGTQAGTLFGSLGGMVHKDLPPLVYback to top mRNA from alignment at Ecto-sp6_S_contig9:2934854..2950464+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig9.18312.1 ID=mRNA_Ecto-sp6_S_contig9.18312.1|Name=mRNA_Ecto-sp6_S_contig9.18312.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=15611bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:2934854..2950464+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig9:2934854..2950464+ >mRNA_Ecto-sp6_S_contig9.18312.1 ID=mRNA_Ecto-sp6_S_contig9.18312.1|Name=mRNA_Ecto-sp6_S_contig9.18312.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1089bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:2934854..2950464+ (Ectocarpus species6 EcLAC_371)back to top |