mRNA_Ecto-sp6_S_contig9.18253.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig9.18253.1 vs. uniprot
Match: D7FVD7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVD7_ECTSI) HSP 1 Score: 2326 bits (6028), Expect = 0.000e+0 Identity = 1271/1499 (84.79%), Postives = 1280/1499 (85.39%), Query Frame = 1
Query: 193 MVLPVGSFPLKTYLPYADVDMVMFLPPKATSTSGGPVGGVGAESSGKEGRKDHEREKATDAHSGGDDGKGTDANHTPALIAATMALCNVAMQASSKRGSPGHSRSWPPLLETAKPEIRNVSLINARTPIVTMVVGNVVVDLTENQGGSVAASALLEEADNLIQRNHLFKRSLLLLKAWAWCETPRLVGNRVLGARKGGLTSYGLSVMVLHLFAASASADALVHPLDVLIRFFEVYSEFDWARYCLTLDGPVPLESVRGSHPYEGSHGNGGTSSRFEPLVKKVLAELFRVPEKDREXXXXXXXXXXXXXAGRRGRRASRFGRLSDRHSEDALPETPRFAAGAMPHFPRRDCNIQDPLNALNNLGHSVTKNNLKALKRALQQGQKKLEAWHLVSHPSPYRSHPKSDGALRRPRETEVSGTGRSQGGRSVEERRDTLLFQAGVGVGSERAEAEATRREGKHRGMAGGGNAPGPQASLELAAPVLEQFKSAPGVVHHLGPPAVAQLVLLPPFPLHAQHPGANVIVGPSVPTLVPGAHPLVAAPRHNAVLAFPRPVMQAAPQQHPYVHQAQRYILPQMQPFVPRPNSAVLVPTPGVQAHAHFPPQWQQLQRVFPGPHPGGHQLGADQQRFSVVNRNVSPEGCRNQATARSDVCVVGPEIATSHQSAPRCEEAKEPPAEKEKCRGGRRKRQEETHDQVMQGPVLPWDLPSFVNASPTSSTASLSDFVEDGSKDGQDCRLHYESGAEDDVHGGLAKESLFVSSLGDSDHSDTMADTRHQKRGEGQRAGMKRASGNLWANWFLREFFPECCQRYGSGDGFRDDLLDHPCQRKSRLQEAGSLPPRRPDAPDVLQGASGEVWKSLTVIGGMMREIAAQTNDRSTKEESAQLRTEPNRAAIGAEGGGXXXXXXXXXSRAHVGHQAGVEPRVVQARRAALASTCTSGDRSAPSANTAVDSCGLEVLRPNRVSDEVEDANRSQRRDGGRPTAATARPQVLVDDETGYTTSEEQGDRECSTSCGGESREDGSVPSPVVEAPSLATLFPVSSSTQTLNTASTGEGGVDVGVQCCPPDSIDQGVQCVLPSPKLRVSCASQCERTRTSIXXXXXXXXXXXXXXXXRXSQSCSRAVRQASSGVQCSLLVAAAEGEGGAVGKGPGGGHPSPSSPHAGVATVGIEDIMAPAFEDTFEEPRDSKEDLERALPQSPGSGKTARVVPAVALSDSSTGGCGGDGVPAPRSKKRRKRAKAGFAAGRSAAAKSVMDRPSEPWSNAQGVLVGGWTRWLVSMAAFCGVVGLVLAAAGGAGRGAGDASWQGGDRLTPRVVHEGQTKRAQPPVWVVAGRSLTLGDVLASRDSAFMANDTGGVQWFRGGNVLPGQTSRPFLTISEVSLEDEGTYACFTVEESGGIGSTPLWEEATVRISEPPLVESQLQTQRLARGEMLAIVATASGVPQPEYQWRRNGVPIPGATRPMLVKHGVSEADMGTYTCDVYNVAGRVQWEEMAVILREDRSKR 4689
MVLPVGSFPLKTYLPYADVDMVMFLPPKATSTSGGPVGGVGAESSGKEGRKDHERE+ATDAHSGGDDGKGTDA HTPALIAATMALCNVAMQASSKRGSPGHSRSWPPLLETAKPEIRNVSLINARTPIVTMVVGNVVVDLTENQGGSVAASALLEEADNLIQRNHLFKRSLLLLKAWAWCETPRLVGNRVLGARKGGLTSYGLSVMVLHLFAASASADALVHPLDVLIRFFEVYSEFDWARYCLTLDGPVPLESVRGSHPYEG HGNGGTSSRFEPLVKKVLAELFRVPEKDREXXXXXXXXXXXX AGRRGRRASR GRLSDRH+EDALPETPRFAAGAMPHFPRRDCNIQDPLNALNNLGHSVTKNNLKALKRALQQGQKKLEAWHLVSHPSP RSHPKSDGALRRP VQAHAHFPPQWQQLQRVFPGPHPGGHQLG DQQRFSVVN NVSPEG R+QA ARSDVC+VGPEIATSHQSAPRCEEA EPPAEKEKCRGGRRKRQEETHDQVMQGPVLPWDLPSFVNASPTSSTASLSDFVEDGSKDGQDCRLHYESGAEDDVHGGL KESLF SSLGDSDHSDTMADTRHQKRGEGQ+AGMKRASGNLWANWFLREFFPECCQRYGSGDGFRDDLLDHPCQRKSRLQEAGSLPPRRPDAPDVLQGASGEVWKSLTVIGGMMREIAAQTNDRSTKEESAQ RTE NRA IGAEG G SRAHVGHQA VEPRVVQARRAALASTC+SGDRSAPSANT VDS GLEVLRPNRVSDEVED NRSQRRDGGRPTAATARPQVLVDDETGYTTSEEQGDRECSTSCGGESREDGSVPSP+VEAPSLA LFPVSSSTQTLNTASTGEGGV+VG QCC PDSIDQGVQCVLPSPKLRVSCASQCERTRTSIXXXXXXXXXXXXXXXXR SQSCSRAVRQASSGVQCSLLVAAAEGEG AVGKGP GGHPSPSSPHAGVATVGIEDIMAPAFEDTFEEPRDSKEDLERALPQSPGSGK ARVVPAVALSDSSTGGCGGDGVPAPRSKKRRK+AKAGFAAGRSAAAKSVMDRPSEPWSNAQGVLVGGWTRWLVSMAAFCGVVGLVLAAAGGAGRGAGDASWQGGDRLTPRVVHEGQTKRAQPPVWVVAGRSLTLGDVL SRDSAFMANDTGGVQWFRGGNVLPGQT RPFLTISEVSLEDEGTYACFTVEESG IGSTPLWEEATVRISEPPLVESQLQTQRLARGEMLAIVATASGVPQPEYQWRRNGVPIPGATRPMLVKHGVSEADMGTYTCDVYNVAGRVQWEEMAVILREDRSKR
Sbjct: 1 MVLPVGSFPLKTYLPYADVDMVMFLPPKATSTSGGPVGGVGAESSGKEGRKDHEREEATDAHSGGDDGKGTDAIHTPALIAATMALCNVAMQASSKRGSPGHSRSWPPLLETAKPEIRNVSLINARTPIVTMVVGNVVVDLTENQGGSVAASALLEEADNLIQRNHLFKRSLLLLKAWAWCETPRLVGNRVLGARKGGLTSYGLSVMVLHLFAASASADALVHPLDVLIRFFEVYSEFDWARYCLTLDGPVPLESVRGSHPYEGWHGNGGTSSRFEPLVKKVLAELFRVPEKDREXXXXXXXXXXXXKAGRRGRRASRVGRLSDRHAEDALPETPRFAAGAMPHFPRRDCNIQDPLNALNNLGHSVTKNNLKALKRALQQGQKKLEAWHLVSHPSPSRSHPKSDGALRRPL-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VQAHAHFPPQWQQLQRVFPGPHPGGHQLGPDQQRFSVVNGNVSPEGWRDQAMARSDVCIVGPEIATSHQSAPRCEEATEPPAEKEKCRGGRRKRQEETHDQVMQGPVLPWDLPSFVNASPTSSTASLSDFVEDGSKDGQDCRLHYESGAEDDVHGGLVKESLFDSSLGDSDHSDTMADTRHQKRGEGQKAGMKRASGNLWANWFLREFFPECCQRYGSGDGFRDDLLDHPCQRKSRLQEAGSLPPRRPDAPDVLQGASGEVWKSLTVIGGMMREIAAQTNDRSTKEESAQPRTETNRAVIGAEGKGGGRGLGR--SRAHVGHQARVEPRVVQARRAALASTCSSGDRSAPSANTGVDSRGLEVLRPNRVSDEVEDENRSQRRDGGRPTAATARPQVLVDDETGYTTSEEQGDRECSTSCGGESREDGSVPSPLVEAPSLAKLFPVSSSTQTLNTASTGEGGVEVGAQCCAPDSIDQGVQCVLPSPKLRVSCASQCERTRTSIXXXXXXXXXXXXXXXXRASQSCSRAVRQASSGVQCSLLVAAAEGEGDAVGKGPRGGHPSPSSPHAGVATVGIEDIMAPAFEDTFEEPRDSKEDLERALPQSPGSGKMARVVPAVALSDSSTGGCGGDGVPAPRSKKRRKKAKAGFAAGRSAAAKSVMDRPSEPWSNAQGVLVGGWTRWLVSMAAFCGVVGLVLAAAGGAGRGAGDASWQGGDRLTPRVVHEGQTKRAQPPVWVVAGRSLTLGDVLTSRDSAFMANDTGGVQWFRGGNVLPGQT-RPFLTISEVSLEDEGTYACFTVEESGRIGSTPLWEEATVRISEPPLVESQLQTQRLARGEMLAIVATASGVPQPEYQWRRNGVPIPGATRPMLVKHGVSEADMGTYTCDVYNVAGRVQWEEMAVILREDRSKR 1317
BLAST of mRNA_Ecto-sp6_S_contig9.18253.1 vs. uniprot
Match: A0A835Z4C8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4C8_9STRA) HSP 1 Score: 204 bits (518), Expect = 9.520e-54 Identity = 159/431 (36.89%), Postives = 209/431 (48.49%), Query Frame = 1
Query: 70 SVRKQVDSLLLRLQPTPVADERRRAVFEHVQEVVQHKLPDCMVLPVGSFPLKTYLPYADVDMVMFLPPKATSTSGGPVGGVGAESSGKEGRKDHEREKATDAHSGGDDGKGTDANHTPALIAATMALCNVAMQASSKRGSPGHSRSWPPLLETAKPEIRNVSLINARTPIVTMVVGNVVVDLTENQGGSVAASALLEEADNLIQRNHLFKRSLLLLKAWAWCETPRLVG--NRVLGARKGGLTSYGLSVMVLHLFAASASADALVHPLDVLIRFFEVYSEFDWARYCLTLDGPVPLESVRGSHPYEGSHGNGGTSSRFEPLVKKVLAELFRVPEKDREXXXXXXXXXXXXXAGRRGRRASRFGRLSDRHSEDALPETPRFAAGAMPH-FPRRDCNIQDPLNALNNLGHSVTKNNLKALKRALQQGQKKLEA 1353
SV +QV+ LL LQP AD RR+AV + V +V L + GSFPL+TYL D+D+V+F P +S G DHE L+ + ALC + + G+S +RNV+ +NART IVT +VG++ VD+T NQ GS+AA+ LLEEAD + R+HL KRS+LLLKAW E PR G V GA+ GLTSY LS+MVL LFA +A L P +VL+ FF YS+FDW C+TL G PL + GS G G G +F LV + +++ + E G ++ AAGA P F R CNIQDPLN NNLGHSV+ L++L AL +G++ LEA
Sbjct: 54 SVDQQVEWLLSHLQPCETADRRRQAVMDQVSGIVSSYLGR-QLFACGSFPLRTYLADGDLDLVLFCGPCPSSAD--------------HGHPDHE------------------------LLKVSSALC---LDVLRQNDGAGYS------------SVRNVNFVNARTRIVTCIVGSLSVDITVNQIGSLAAALLLEEADRRV-RDHLIKRSVLLLKAWGLHEAPRYAGITQPVFGAKATGLTSYALSIMVLRLFALNACE--LRTPTEVLLAFFREYSDFDWDNLCVTLSGSKPLSASGGS----GVAGGGSDQHKFAALVSHLRSKIAQAKE----------------------------GAVA-------------AAAGAPPERFQHRFCNIQDPLNDTNNLGHSVSLPVLRSLISALAKGRQHLEA 382
BLAST of mRNA_Ecto-sp6_S_contig9.18253.1 vs. uniprot
Match: A0A7J8REN7_GOSDV (Uncharacterized protein (Fragment) n=4 Tax=Gossypium TaxID=3633 RepID=A0A7J8REN7_GOSDV) HSP 1 Score: 155 bits (391), Expect = 1.880e-36 Identity = 124/418 (29.67%), Postives = 191/418 (45.69%), Query Frame = 1
Query: 94 LLLRLQPTPVADERRRAVFEHVQEVVQHKLPDCMVLPVGSFPLKTYLPYADVDMVMFLPPKATSTSGGPVGGVGAESSGKEGRKDHEREKATDAHSGGDDGKGTDANHTPALIAATMALCNVAMQASSKRGSPGHSRSWPPLLETAKPEIRNVSLINARTPIVTMVVGNVVVDLTENQGGSVAASALLEEADNLIQRNHLFKRSLLLLKAWAWCETPRLVGNRVLGARKGGLTSYGLSVMVLHLFAASASADALVHPLDVLIRFFEVYSEFDWARYCLTLDGPVPLESVRGSHPYEGSHGNGGTSSRFEPLVKKVLAELFRVPEKDREXXXXXXXXXXXXXAGRRGRRASRFGRLSDRHSEDALPETPRFAAGAMPHFPRRDCNIQDPLNALNNLGHSVTKNNLKALKRALQQGQKKL 1347
++ R+QPT V++ERR+AV ++VQ ++++ L C V P GS PLKTYLP D+D+ F GG + E A D +C+V + H+ + A+ +++V LI A +V +V N+VVD++ NQ G + LE+ D LI ++HLFKRS++L+KAW + E +R+LGA G +++YGL +VL++F S+ L PL VL +F + +S+FDW YC++L+GP+P+ S+ E GG +++ + E F VP + E SR FP++ NI DPL NNLG SV+K N ++ A G +KL
Sbjct: 51 IIARVQPTVVSEERRKAVIDYVQRLIRNYL-GCEVFPFGSVPLKTYLPDGDIDLTAF---------GGLI---------------FEEALAND-------------------------VCSVLERED-------HNTA-------AEFVVKDVQLIRAEVKLVKCLVQNIVVDISFNQLGGLCTLCFLEQVDCLIGKDHLFKRSIILIKAWCYYE------SRILGAHHGLISTYGLETLVLYIFHLFHSS--LDGPLAVLYKFLDYFSKFDWENYCISLNGPIPISSLP-DIVVETPENGGGDLLLSNDFLRECV-EKFSVPSRGFEAN-------------------SRI-------------------------FPQKHLNIVDPLRENNNLGRSVSKGNFYRIRSAFTYGARKL 350
BLAST of mRNA_Ecto-sp6_S_contig9.18253.1 vs. uniprot
Match: A0A0D2S8Y9_GOSRA (Uncharacterized protein n=4 Tax=Gossypium TaxID=3633 RepID=A0A0D2S8Y9_GOSRA) HSP 1 Score: 157 bits (396), Expect = 5.500e-35 Identity = 126/418 (30.14%), Postives = 190/418 (45.45%), Query Frame = 1
Query: 94 LLLRLQPTPVADERRRAVFEHVQEVVQHKLPDCMVLPVGSFPLKTYLPYADVDMVMFLPPKATSTSGGPVGGVGAESSGKEGRKDHEREKATDAHSGGDDGKGTDANHTPALIAATMALCNVAMQASSKRGSPGHSRSWPPLLETAKPEIRNVSLINARTPIVTMVVGNVVVDLTENQGGSVAASALLEEADNLIQRNHLFKRSLLLLKAWAWCETPRLVGNRVLGARKGGLTSYGLSVMVLHLFAASASADALVHPLDVLIRFFEVYSEFDWARYCLTLDGPVPLESVRGSHPYEGSHGNGGTSSRFEPLVKKVLAELFRVPEKDREXXXXXXXXXXXXXAGRRGRRASRFGRLSDRHSEDALPETPRFAAGAMPHFPRRDCNIQDPLNALNNLGHSVTKNNLKALKRALQQGQKKL 1347
++ R+QPT V++ERR+AV ++VQ ++++ L C V P GS PLKTYLP D+D+ F GG + E A D +C+V + H+ + A+ +++V LI A +V +V N+VVD++ NQ G + LE+ D LI +NHLFKRS+LL+KAW + E +R+LGA G +++YGL +VL++F S L PL VL +F + +S+FDW YC++L+GP+P+ S+ E GG +++ + E F VP + E SR FP++ NI DPL NNLG SV+K N ++ A G +KL
Sbjct: 51 IIARVQPTVVSEERRKAVTDYVQRLIRNYL-GCEVFPFGSVPLKTYLPDGDIDLTAF---------GGLI---------------FEEALAND-------------------------VCSVLERED-------HNTA-------AEFVVKDVQLIRAEVKLVKCLVQNIVVDISFNQLGGLCTLCFLEQVDRLIGKNHLFKRSILLIKAWCYYE------SRILGAHHGLISTYGLETLVLYIFHLFHSF--LDGPLAVLYKFLDYFSKFDWENYCISLNGPIPISSLP-DIVVETPENGGGDLLLSNDFLRECV-EKFSVPSRGFEAN-------------------SRI-------------------------FPQKHLNIVDPLRENNNLGRSVSKGNFYRIRSAFTYGARKL 350
BLAST of mRNA_Ecto-sp6_S_contig9.18253.1 vs. uniprot
Match: UPI00053C7FA6 (uncharacterized protein LOC104806129 n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C7FA6) HSP 1 Score: 155 bits (392), Expect = 1.160e-34 Identity = 124/418 (29.67%), Postives = 182/418 (43.54%), Query Frame = 1
Query: 94 LLLRLQPTPVADERRRAVFEHVQEVVQHKLPDCMVLPVGSFPLKTYLPYADVDMVMFLPPKATSTSGGPVGGVGAESSGKEGRKDHEREKATDAHSGGDDGKGTDANHTPALIAATMALCNVAMQASSKRGSPGHSRSWPPLLETAKPEIRNVSLINARTPIVTMVVGNVVVDLTENQGGSVAASALLEEADNLIQRNHLFKRSLLLLKAWAWCETPRLVGNRVLGARKGGLTSYGLSVMVLHLFAASASADALVHPLDVLIRFFEVYSEFDWARYCLTLDGPVPLESVRGSHPYEGSHGNGGTSSRFEPLVKKVLAELFRVPEKDREXXXXXXXXXXXXXAGRRGRRASRFGRLSDRHSEDALPETPRFAAGAMPHFPRRDCNIQDPLNALNNLGHSVTKNNLKALKRALQQGQKKL 1347
++ ++QPT V++ERRRAV ++VQ +++ L C V P GS PLKTYLP D+D+ F GG+ E A +C+V + R S + +++V LI A +V +V N+VVD++ NQ G + LEE D I ++HLFKRS++L+K W + E +R+LGA G +++Y L +VL+ F S+ L PL VL +F + +S+FDW YC++L+GPV L S+ + NGG K AE++ VP + L TPR FP + NI DPL NNLG SV+K N ++ A G +KL
Sbjct: 41 IIAQVQPTLVSEERRRAVIDYVQRLIRTTL-GCEVHPFGSVPLKTYLPDGDIDLTAF-------------GGLNLEE------------------------------------ALANEVCSVLEREERNRAS--------------RFVVKDVQLIRAEVKLVKCLVQNIVVDISFNQLGGLCTLCFLEEIDRRIGKDHLFKRSIILIKTWCYYE------SRILGAHHGLISTYALETLVLYTFHLFHSS--LDGPLAVLYKFLDHFSKFDWDNYCISLNGPVRLSSL--PEVVAETPENGGQDLLLTSEFLKECAEMYSVPSR-------------------------------------GLETTPRA-------FPLKHLNIVDPLRENNNLGRSVSKGNFYRIRSAFTYGARKL 340
BLAST of mRNA_Ecto-sp6_S_contig9.18253.1 vs. uniprot
Match: A0A6P4NWR1_GOSAR (uncharacterized protein LOC108475915 isoform X2 n=36 Tax=Gossypium TaxID=3633 RepID=A0A6P4NWR1_GOSAR) HSP 1 Score: 155 bits (393), Expect = 1.290e-34 Identity = 124/418 (29.67%), Postives = 191/418 (45.69%), Query Frame = 1
Query: 94 LLLRLQPTPVADERRRAVFEHVQEVVQHKLPDCMVLPVGSFPLKTYLPYADVDMVMFLPPKATSTSGGPVGGVGAESSGKEGRKDHEREKATDAHSGGDDGKGTDANHTPALIAATMALCNVAMQASSKRGSPGHSRSWPPLLETAKPEIRNVSLINARTPIVTMVVGNVVVDLTENQGGSVAASALLEEADNLIQRNHLFKRSLLLLKAWAWCETPRLVGNRVLGARKGGLTSYGLSVMVLHLFAASASADALVHPLDVLIRFFEVYSEFDWARYCLTLDGPVPLESVRGSHPYEGSHGNGGTSSRFEPLVKKVLAELFRVPEKDREXXXXXXXXXXXXXAGRRGRRASRFGRLSDRHSEDALPETPRFAAGAMPHFPRRDCNIQDPLNALNNLGHSVTKNNLKALKRALQQGQKKL 1347
++ R+QPT V++ERR+AV ++VQ ++++ L C V P GS PLKTYLP D+D+ F GG + E A D +C+V + H+ + A+ +++V LI A +V +V N+VVD++ NQ G + LE+ D LI ++HLFKRS++L+KAW + E +R+LGA G +++YGL +VL++F S+ L PL VL +F + +S+FDW YC++L+GP+P+ S+ E GG +++ + E F VP + E SR FP++ NI DPL NNLG SV+K N ++ A G +KL
Sbjct: 51 IIARVQPTVVSEERRKAVIDYVQRLIRNYL-GCEVFPFGSVPLKTYLPDGDIDLTAF---------GGLI---------------FEEALAND-------------------------VCSVLERED-------HNTA-------AEFVVKDVQLIRAEVKLVKCLVQNIVVDISFNQLGGLCTLCFLEQVDRLIGKDHLFKRSIVLIKAWCYYE------SRILGAHHGLISTYGLETLVLYIFHLFHSS--LDGPLAVLYKFLDYFSKFDWENYCISLNGPIPISSLP-DIVVETPENGGGDLLLSNDFLRECV-EKFSVPSRGFEAN-------------------SRI-------------------------FPQKHLNIVDPLRENNNLGRSVSKGNFYRIRSAFTYGARKL 350
BLAST of mRNA_Ecto-sp6_S_contig9.18253.1 vs. uniprot
Match: A0A7I8K5V0_SPIIN (Hypothetical protein n=1 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8K5V0_SPIIN) HSP 1 Score: 155 bits (391), Expect = 1.340e-34 Identity = 127/432 (29.40%), Postives = 188/432 (43.52%), Query Frame = 1
Query: 52 GQDKGKSVRKQVDSLLLRLQPTPVADERRRAVFEHVQEVVQHKLPDCMVLPVGSFPLKTYLPYADVDMVMFLPPKATSTSGGPVGGVGAESSGKEGRKDHEREKATDAHSGGDDGKGTDANHTPALIAATMALCNVAMQASSKRGSPGHSRSWPPLLETAKPEIRNVSLINARTPIVTMVVGNVVVDLTENQGGSVAASALLEEADNLIQRNHLFKRSLLLLKAWAWCETPRLVGNRVLGARKGGLTSYGLSVMVLHLFAASASADALVHPLDVLIRFFEVYSEFDWARYCLTLDGPVPLESVRGSHPYEGSHGNGGTSSRFEPLVKKVLAELFRVPEKDREXXXXXXXXXXXXXAGRRGRRASRFGRLSDRHSEDALPETPRFAAGAMPHFPRRDCNIQDPLNALNNLGHSVTKNNLKALKRALQQGQKKL 1347
G D + + V+ ++ R+QPT V D+RRR V E+V+ +++ + + P GS PLKTYLP D+D+ PP++ E A D + NV R SP E+++V I+A +V +V N+VVD++ Q G + LE+ D +I +NHLFKRS++L+KAW + E +R+LGA G +++Y L +VL++F +L PL VL RF + +S+FDW YC++L+GPV L S+ + P + + +G +KK E AS F R SD S L F R+ NI DPL A NNLG SV K N ++ A G +KL
Sbjct: 37 GADSWRLAEQAVEGIIQRIQPTRVTDQRRRQVVEYVRNLIKG-VAYAEIFPFGSVPLKTYLPDGDIDLTAIEPPRS------------------------EEYLAKD-------------------------VLNVLQAEEQNRNSPF--------------EVKDVQYIHAEVKLVKCLVQNIVVDISFQQVGGLCTLCFLEKVDRIIGKNHLFKRSIILIKAWCYYE------SRILGAHHGLISTYALETLVLYIF--HVFHPSLDGPLAVLYRFLDYFSQFDWDNYCVSLNGPVRLTSLPDTPP-KPTEADGADLLLSRDFLKKCEDEF-----------------------------ASAF-RWSDNASNPRL-------------FHRKHLNIIDPLKANNNLGRSVNKGNFYRIRSAFTFGARKL 352
BLAST of mRNA_Ecto-sp6_S_contig9.18253.1 vs. uniprot
Match: UPI000B77B0ED (uncharacterized protein LOC110670161 n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=UPI000B77B0ED) HSP 1 Score: 155 bits (393), Expect = 1.400e-34 Identity = 121/418 (28.95%), Postives = 182/418 (43.54%), Query Frame = 1
Query: 94 LLLRLQPTPVADERRRAVFEHVQEVVQHKLPDCMVLPVGSFPLKTYLPYADVDMVMFLPPKATSTSGGPVGGVGAESSGKEGRKDHEREKATDAHSGGDDGKGTDANHTPALIAATMALCNVAMQASSKRGSPGHSRSWPPLLETAKPEIRNVSLINARTPIVTMVVGNVVVDLTENQGGSVAASALLEEADNLIQRNHLFKRSLLLLKAWAWCETPRLVGNRVLGARKGGLTSYGLSVMVLHLFAASASADALVHPLDVLIRFFEVYSEFDWARYCLTLDGPVPLESVRGSHPYEGSHGNGGTSSRFEPLVKKVLAELFRVPEKDREXXXXXXXXXXXXXAGRRGRRASRFGRLSDRHSEDALPETPRFAAGAMPHFPRRDCNIQDPLNALNNLGHSVTKNNLKALKRALQQGQKKL 1347
++ ++QPT V++ERR+AV ++VQ ++++ + C V P GS PLKTYLP D+D+ F GG+ E A +C+V + R A+ +++V LI A +V +V N+VVD++ NQ G + LE+ D LI +NHLFKRS++L+KAW + E +R+LGA G +++Y L +VL++F S+ L PL VL +F + +S+FDW YC++L+GPV + S+ + NGG K E+F VP + E FP + NI DPL NNLG SV+K N +K A G +KL
Sbjct: 48 IIAQVQPTLVSEERRKAVIDYVQRLIRNSV-GCEVFPFGSVPLKTYLPDGDIDLTAF-------------GGMNIEE------------------------------------ALANDVCSVLEREDQNR--------------IAEFVVKDVQLIRAEVKLVKCLVQNIVVDISFNQLGGLCTLCFLEQVDCLIGKNHLFKRSIILIKAWCYYE------SRILGAHHGLISTYALETLVLYIFHLFHSS--LTGPLAVLYKFLDYFSKFDWDNYCISLNGPVRISSL--PEVVVETPENGGFDLLLSNDFLKECVEMFSVPARAYETNSRT--------------------------------------------FPPKHLNIVDPLKENNNLGRSVSKGNFYRIKSAFTYGARKL 347
BLAST of mRNA_Ecto-sp6_S_contig9.18253.1 vs. uniprot
Match: UPI001CC39B5A (uncharacterized protein LOC122671496 isoform X1 n=3 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC39B5A) HSP 1 Score: 155 bits (392), Expect = 1.980e-34 Identity = 118/420 (28.10%), Postives = 186/420 (44.29%), Query Frame = 1
Query: 88 DSLLLRLQPTPVADERRRAVFEHVQEVVQHKLPDCMVLPVGSFPLKTYLPYADVDMVMFLPPKATSTSGGPVGGVGAESSGKEGRKDHEREKATDAHSGGDDGKGTDANHTPALIAATMALCNVAMQASSKRGSPGHSRSWPPLLETAKPEIRNVSLINARTPIVTMVVGNVVVDLTENQGGSVAASALLEEADNLIQRNHLFKRSLLLLKAWAWCETPRLVGNRVLGARKGGLTSYGLSVMVLHLFAASASADALVHPLDVLIRFFEVYSEFDWARYCLTLDGPVPLESVRGSHPYEGSHGNGGTSSRFEPLVKKVLAELFRVPEKDREXXXXXXXXXXXXXAGRRGRRASRFGRLSDRHSEDALPETPRFAAGAMPHFPRRDCNIQDPLNALNNLGHSVTKNNLKALKRALQQGQKKL 1347
+ ++ R+QPT V+++RR+AV +++Q ++++ L V P GS PLKTYLP D+D+ F A V GV ++ + E A+ E+++V I+A +V +V N+VVD++ NQ G + LE+ D+LI ++HLFKRS++L+KAW + E +R+LGA G +++Y L +VL++F S+ L PL VL RF + +S+FDW YC++L+GPV + ++ + GNGG+ K ++F P + E TPR FP++ NI DPL NNLG SV+K N ++ A G +KL
Sbjct: 51 NGIICRIQPTVVSEQRRKAVIDYIQRLIRNYLGS-EVFPFGSVPLKTYLPDGDIDLSAFSTLNAEDALANDVRGV--------------------------------------------------LEVEEQN-------------EAAEFEVKDVQYIHAEVKLVKCLVQNIVVDISFNQVGGLCTLCFLEKIDSLIGKDHLFKRSIILIKAWCYYE------SRILGAHHGLISTYALETLVLYVFHLFHSS--LNGPLAVLFRFLDYFSKFDWDNYCISLNGPVCISAL--PEIVAETPGNGGSDLLLSKEFLKRCVDMFSAPSRGFET-------------------------------------TPRA-------FPQKHLNIIDPLKENNNLGRSVSKGNFYRIRSAFTYGARKL 352
BLAST of mRNA_Ecto-sp6_S_contig9.18253.1 vs. uniprot
Match: A0A6J1CSH2_MOMCH (uncharacterized protein LOC111013800 n=1 Tax=Momordica charantia TaxID=3673 RepID=A0A6J1CSH2_MOMCH) HSP 1 Score: 155 bits (391), Expect = 2.450e-34 Identity = 124/448 (27.68%), Postives = 196/448 (43.75%), Query Frame = 1
Query: 31 PYGVSDRGQDKGKSVRKQVDSLLLRLQPTPVADERRRAVFEHVQEVVQHKLPDCMVLPVGSFPLKTYLPYADVDMVMFLPPKATSTSGGPVGGVGAESSGKEGRKDHEREKATDAHSGGDDGKGTDANHTPALIAATMALCNVAMQASSKRGSPGHSRSWPPLLETAKPEIRNVSLINARTPIVTMVVGNVVVDLTENQGGSVAASALLEEADNLIQRNHLFKRSLLLLKAWAWCETPRLVGNRVLGARKGGLTSYGLSVMVLHLFAASASADALVHPLDVLIRFFEVYSEFDWARYCLTLDGPVPLESVRGSHPYEGSHGNGGTSSRFEPLVKKVLAELFRVPEKDREXXXXXXXXXXXXXAGRRGRRASRFGRLSDRHSEDALPETPRFAAGAMPHFPRRDCNIQDPLNALNNLGHSVTKNNLKALKRALQQGQKKLEAWHLVSHP 1374
P ++ G D + +++ ++QPT V++ RR+ V ++VQ +++ +L C V P GS PLKTYLP D+D+ +GG E A +C+V + + + G+ A+ +++V LI A +V +V N+VVD++ NQ G + LE+ D LI ++HLFKRS++L+KAW + E +R+LGA G +++Y L +VL++F SA L PL+VL +F + +S+FDW YC++L+GPV + S+ + NGG K E+F VP + E FP + NI DPL NNLG SV+K N ++ A G +KL + ++SHP
Sbjct: 34 PSNPTEIGADYWPRAEEATQAIISQVQPTVVSERRRKEVIDYVQRLIRGRL-GCEVFPFGSVPLKTYLPDGDIDLTA-------------LGGTNVEE------------------------------------ALANDVCSV-LNSEDQNGA-------------AEFVVKDVQLIRAEVKLVKCLVQNIVVDISFNQLGGLCTLCFLEQIDRLIGKDHLFKRSIILIKAWCYYE------SRILGAHHGLISTYALETLVLYIFHLFHSA--LNGPLEVLYKFLDYFSKFDWDNYCISLNGPVRISSL--PELVAETPENGGGDLLLTTDFLKSCLEMFSVPARGYEANSRA--------------------------------------------FPIKHLNIVDPLKENNNLGRSVSKGNFYRIRSAFSYGARKLGS--ILSHP 361 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18253.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig9.18253.1 >prot_Ecto-sp6_S_contig9.18253.1 ID=prot_Ecto-sp6_S_contig9.18253.1|Name=mRNA_Ecto-sp6_S_contig9.18253.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=1564bp MRSKSSIAQEPYGVSDRGQDKGKSVRKQVDSLLLRLQPTPVADERRRAVFback to top mRNA from alignment at Ecto-sp6_S_contig9:2312706..2326728+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig9.18253.1 ID=mRNA_Ecto-sp6_S_contig9.18253.1|Name=mRNA_Ecto-sp6_S_contig9.18253.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=14023bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:2312706..2326728+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig9:2312706..2326728+ >mRNA_Ecto-sp6_S_contig9.18253.1 ID=mRNA_Ecto-sp6_S_contig9.18253.1|Name=mRNA_Ecto-sp6_S_contig9.18253.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=4692bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:2312706..2326728+ (Ectocarpus species6 EcLAC_371)back to top |