|
|
Homology
BLAST of mRNA_Ecto-sp6_S_contig9.18226.1 vs. uniprot
Match: A0A6H5L0D2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0D2_9PHAE) HSP 1 Score: 2018 bits (5229), Expect = 0.000e+0 Identity = 1292/1566 (82.50%), Postives = 1329/1566 (84.87%), Query Frame = 2
Query: 149 DTLILHLCGTGEGVEEARRRLDITIRTTEAVVKASPPLAAALRACRRALLLRLEKEHGVKIFIVGPAAAVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------GQVAVDVTVCGLPKEIDAARAELEGLDCLELAVPVTRKSLPSIFGSGGANLQQMESEYGVCLDVQTGVSRVVLKGVRAGVESAAEKIRAMSHEFRDTEERWPVEPYQVSFLLRNRGAELKGMAHRVGGGVMMTILEEAKTKAPAAAPTLPAASLSEGEGEEMDEARQPXXXXXXXXXXXXXXXXXSTTSFVWVRGTAPRVSAAGVLLLERLKAAERLTAKVAVREDVVSTFVGHAGSEIRKLRRLCVGCDLGLSPATDGVAEVLLLADDEARLAAAVGLVEKWVHHQQVRMVAVGSKIAGMLRTFRAAGVRDRITGANRRQKGSETSGXXXXXXXXXXXXXXXXANSNEGGRARGDAGEGGDADELFGGVMMDSLVAEGMVRLRGGDEELDRAERLVREFEADNWTTEAPVAISDEDVLLRKGFLRNMQANQTDVNLHFLRDRGVVVVRGRQEHAESAATLLLSKLHGGGKLDENGIPPCSVSLVAVAPSGMEALTARGRLHLKRLSADTGTEMHVVPAASVVRIRARGRDPEAVAEAKRALLRFVGGHRAEVFLDLAKIVSGASPPAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSG--VGRDGGVGASAADAKKAVRTPVSSVSNKIIRRTVKLHGCEAEFVAAPPPSPPVPSNTASGGRGGVNXXXXXXXXXXXXXXXXXX-----GPXXXXXXXXXXXXXXXXXXXXXTADGTHDDGSLSAVTGVSYTLSAPARGVMIRGLPGLVDKARDALVALVLGREDGEVALGEEAAAAALGADSWRKIQDSSERVTITPDRSRCSLRVSGPPAAVEACRRELYTMLADAFQGEFVAVPIPREALHEVATPLRLADAAXXXXXXXXXXXXXXXPKTGDGKRTAAAAGQIAEVLGPMGVAAAACGWRGEGNVQLLADWPCSCVRVRGEAAAVSVAVDEIKTALSKWSALAVAAEVEEWMEPELFGKQRKAIKKLSQSMGGVVLNVVDGVCSGRAASEEEARDATRKLEERVNELRARRAVVRVPPEVMTRLTGRGGCSIDKIKERTRATICIGEGVGEKEVIICGDPSAVAAAKREVEAMARGPSKSSPAAQASKDRQSQDGSVPDAAGDPSPLLPPSRGEGVPHTGTPSXXXXXXXXXXXXXLHAGNAAGGGGQDVDLADRRGGEATPGSVKTAGAVPKLDGEGFRRGVEDQERVAEEQQPPVVTPPGGRGDARQAPGPSASGSTRRPLGDRDASXXXXXXXXXXXXXXXXXXGSGS--FGTKERDVPR-GXXXXXXXXXXXXXXXXXXXXXGSHHPAKGSSASSYRGSLGERDTRVSAATESEAERLLASLLLVDNVAADVGPLSGRSHFSRRRREGAEATTGVGAGLRQPXXXXXXXXXX-DTGGHRATPAATAAAGGLVVGSATPACNGSPSPSLLPVGGGVAPACGGGYFTSSSGIRVRL 4789
DTLILHL GT EGVEEARRRLD+TIRTTEAVVKASP LAAALRA RRALLLRLEKEHGVKIFIVGPAA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GQVAVDVTVCGLPK IDAARAELEGLDCLELAVPVTRK+LPSIFGSGGANLQQMESEYGVCLDVQTGVSRVVL GVRAGVE+AAEKIRA+SHEFRDTEERWPVEPYQVSFLLRNRGAELKGMAHRVGGGVMMTILE AKTK PAAAPTLPAA+L EGEGE++DEA STTSFVWVRG APRVSAAGVLLLERLKAAE LTAKVAVRED+VSTFVGHAGSEIRKLRRLCVGCDLGLSPATDGVAEVLLLADDEARLAAAVGLVEKWVHHQQVRMVAVGSKIAGMLRTFRAAGVRDRITGANRRQKGS TS XXXXXXXXXXXXX N+GGRARGDAGEGGD D+LFGGV+MDSLVAEGMVRLRGGDEELDRAERLVREFEADNWTTEAPVAISDEDVL RKGFLR MQAN+TDVNLH+LRDRGVVVVRGRQEHAESAA LL KLHGGG+LDENG+PPCSVSLVAVAPSGME LTARGRLHLKRLSADTGTEMHV+PAASVVRIRARGRD V+EAKRALLRF+GGHRAEVFLDLAK+VS ASPPAQ XXXXXXXXXXXXXXXXXXXXXXXX VGRDGGVGASAADAKKAVRTPVSSVSNKIIRRTVKLHGCE EFVAAPPPSP XXXXXXXXXXXXXXXXX GP TAD HDDGSLSAVTGVSYT SAPAR VMIRGLPG VDKARDALVALVLG EDGEVALGEE AAA LGADSWRKIQDSS RVTITPD+SRCSLRVSGPPAAVEACR+ELYTMLADA +G+FVAVPIPREALHEVAT LRLADAAXXXXXXXX PKTGDGKRTAAAAGQIAEVLGP G+A+AACGWRGEGNVQLLADWPCSCVRVRGEAAAVSVAVDEI TALS WSAL V AEVEEWMEPEL GKQRKAIKKLSQSMGGVVLNVVDGVC GRAASEEEARDATRKLEERVNELRARRAVVRVPPEV+++LTGR GCSIDK+KERTRATICI EGVG KE IICGDP+AVAAAK EVEAMARGPSKS PA QA +RQSQDGSVPDAAGDPSPLL PS GEGVP TGTPS HAGN AGGGGQDVDLADRR +AT GSVKTA AVPKLDGEG+RRGVEDQERV EEQ P VVTPPGG GDARQAPGPSASGST RPLG RDASXXXXXXXXXXXXXXXXXX +GS F T RD PR G +H+PAKGSSASSYRG LGERD RVSAATESEAERLLASLLLVDN AADVGP +S S REGA ATTGVGAGLRQP DTGGHRATPA TAA G L G ATPACNGSP PSL PVGGGVAPACGGGYFTSSSGIRVRL
Sbjct: 207 DTLILHLSGTREGVEEARRRLDVTIRTTEAVVKASPALAAALRASRRALLLRLEKEHGVKIFIVGPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGQVAVDVTVCGLPKGIDAARAELEGLDCLELAVPVTRKALPSIFGSGGANLQQMESEYGVCLDVQTGVSRVVLMGVRAGVEAAAEKIRAISHEFRDTEERWPVEPYQVSFLLRNRGAELKGMAHRVGGGVMMTILEGAKTKGPAAAPTLPAAALLEGEGEDVDEAPH----SPEEEVKEGRGGSQSTTSFVWVRGAAPRVSAAGVLLLERLKAAEHLTAKVAVREDIVSTFVGHAGSEIRKLRRLCVGCDLGLSPATDGVAEVLLLADDEARLAAAVGLVEKWVHHQQVRMVAVGSKIAGMLRTFRAAGVRDRITGANRRQKGSGTSXXXXXXXXXXXXXX------NDGGRARGDAGEGGDPDDLFGGVIMDSLVAEGMVRLRGGDEELDRAERLVREFEADNWTTEAPVAISDEDVLFRKGFLRKMQANETDVNLHYLRDRGVVVVRGRQEHAESAAASLLWKLHGGGELDENGMPPCSVSLVAVAPSGMEVLTARGRLHLKRLSADTGTEMHVIPAASVVRIRARGRDAGVVSEAKRALLRFLGGHRAEVFLDLAKVVSDASPPAQHSSSGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGRDGGVGASAADAKKAVRTPVSSVSNKIIRRTVKLHGCEVEFVAAPPPSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAERHRNGPYKSGPGRQDAGGRGAGVGAITTADDAHDDGSLSAVTGVSYTSSAPARMVMIRGLPGQVDKARDALVALVLGWEDGEVALGEEGAAA-LGADSWRKIQDSSGRVTITPDKSRCSLRVSGPPAAVEACRKELYTMLADASRGKFVAVPIPREALHEVATSLRLADAAXXXXXXXXSS-----PKTGDGKRTAAAAGQIAEVLGPTGIASAACGWRGEGNVQLLADWPCSCVRVRGEAAAVSVAVDEINTALSMWSALTVTAEVEEWMEPELLGKQRKAIKKLSQSMGGVVLNVVDGVCCGRAASEEEARDATRKLEERVNELRARRAVVRVPPEVVSQLTGRRGCSIDKLKERTRATICIEEGVGGKEFIICGDPAAVAAAKLEVEAMARGPSKSGPATQAPNNRQSQDGSVPDAAGDPSPLLSPSPGEGVPQTGTPSPLPPSRQNQNQQ--HAGNTAGGGGQDVDLADRRECDATAGSVKTAVAVPKLDGEGYRRGVEDQERVGEEQ-PLVVTPPGGGGDARQAPGPSASGSTGRPLGARDASXXXXXXXXXXXXXXXXXXXAGSEGFETNARDNPRSGGDPAGVAAEPAGSPAPAVVSSSNHYPAKGSSASSYRGRLGERDRRVSAATESEAERLLASLLLVDNAAADVGPPMDQSRLSPGHREGAAATTGVGAGLRQPPPLPSPFSVSGDTGGHRATPATTAAGGSLGRGPATPACNGSPPPSLQPVGGGVAPACGGGYFTSSSGIRVRL 1753
BLAST of mRNA_Ecto-sp6_S_contig9.18226.1 vs. uniprot
Match: D7FTS7_ECTSI (KH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTS7_ECTSI) HSP 1 Score: 1244 bits (3218), Expect = 0.000e+0 Identity = 773/978 (79.04%), Postives = 786/978 (80.37%), Query Frame = 2
Query: 1598 MMDSLVAEGMVRLRGGDEELDRAERLVREFEADNWTTEAPVAISDEDVLLRKGFLRNMQANQTDVNLHFLRDRGVVVVRGRQEHAESAATLLLSKLHGGGKLDENGIPPCSVSLVAVAPSGMEALTARGRLHLKRLSADTGTEMHVVPAASVVRIRARGRDPEAVAEAKRALLRFVGGHRAEVFLDLAKIVSGASPPAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSG---VGRDGGVGASAADAKKAVRTPVSSVSNKIIRRTVKLHGCEAEFVAAPPPSPPVPSNTASGGRGGVNXXXXXXXXXXXXXXXXXXGPXXXXXXXXXXXXXXXXXXXXXTADGTHDDGSLSAVTGVSYTLSAPARGVMIRGLPGLVDKARDALVALVLGREDGEVALGEEAAAAALGADSWRKIQDSSERVTITPDRSRCSLRVSGPPAAVEACRRELYTMLADAFQGEFVAVPIPREALHEVATPLRLADAAXXXXXXXXXXXXXXXPKTGDGKRTAAAAGQIAEVLGPMGVAAAACGWRGEGNVQLLADWPCSCVRVRGEAAAVSVAVDEIKTALSKWSALAVAAEVEEWMEPELFGKQRKAIKKLSQSMGGVVLNVVDGVCSGRAASEEEARDATRKLEERVNELRARRAVVRVPPEVMTRLTGRGGCSIDKIKERTRATICIGEGVGEKEVIICGDPSAVAAAKREVEAMARGPSKSSPAAQASKDRQSQDGSVPDAAGDPSPLLPPSRGEGVPHTGTPSXXXXXXXXXXXXXLHAGNAAGGGGQDVDLADRRGGEATPGSVKTAGAVPKLDGEGFRRGVEDQERVAEEQQPPVVTPPGGRGDARQAPGPSASGSTRRPLGDRDASXXXXXXXXXXXXXXXXXXGSGSFGTKERDVPRGXXXXXXXXXXXXXXXXXXXXXGSHHPAKGSSASSYRGSLGERDTRVSAATESEAERLLASLLLVDNVAADVGPLSGRSHFSRR 4522
MMDSLVAEGMVRLRGGDEELDRAERLVREFEADNWTTEAPVAISDEDVLLRKGFLRNMQANQTDVNLHFLRDRGVVVVRGRQ+HAESAATLLLSKLHGGG+LDENG+PPCSVSLVAVAPSGME LTARGRLHLKRLSADTGTEMHV+P ASVVRIRARGRDPEAVAEA RALLRFVGGHRAEVFLDLAK+ S ASPPA XXXXXXXXXXXXXX XXXX VGRDGGVGASAADAKKAVRTPVSSVSNKIIRRTVKLHGCEAEFVAAPPPSPPV SNTASGGR XXXXXXXXXXXXXX GP TAD THDDGSLSAVTGVSYT SAPAR VMIRGLPGLVDKARDALVALVLGREDGEVALGEEAAAA LGADSWRKIQDSSERVTITPDRSRCSLRVSGPPAAVEACRRELYTMLADAF+GEFVAVPIPREALHEVATPLRLADAA XXXXXXX P+TGDGKRTAAAAGQIAEVLGPMGVAAAACGWRGEGNVQLLADWPCSCVRVRGEAAAVSVAV EI TALSKWSALAVAAEVEEWMEPELFGKQRKAIKKLSQSMGGVVLNVVDGVCSGRAASEEEARDATRKLEERV+ELRARRAVVRVPPEV+TRLTGRGGCSIDKIKERTRATI IGEGVG EVIICGDPSAVAAA+REVEAMARGPSKSSPAAQA KDRQS DG VPDAAGDPSPLLPPS GEGVP TGTPSXXXXXXX LHAGNAAGGGGQDVDLADRRGGEAT GSVKTA P +PP P+ G GS+HPAKGSSASSYRG LGERDTRVSAATESEAERLLASLLLVDNVAADVG LSGRSHFSRR
Sbjct: 1 MMDSLVAEGMVRLRGGDEELDRAERLVREFEADNWTTEAPVAISDEDVLLRKGFLRNMQANQTDVNLHFLRDRGVVVVRGRQKHAESAATLLLSKLHGGGELDENGMPPCSVSLVAVAPSGMEVLTARGRLHLKRLSADTGTEMHVIPPASVVRIRARGRDPEAVAEATRALLRFVGGHRAEVFLDLAKVESDASPPAXXXXXXXXXXXXXXXGKAGAEAMQEVVXXXXXXXXXVGRDGGVGASAADAKKAVRTPVSSVSNKIIRRTVKLHGCEAEFVAAPPPSPPVSSNTASGGRXXXXXXXXXXXXXXXXXXRHRHGPHKSGPGRQDAGGRGAGVGATTTADDTHDDGSLSAVTGVSYTSSAPARRVMIRGLPGLVDKARDALVALVLGREDGEVALGEEAAAA-LGADSWRKIQDSSERVTITPDRSRCSLRVSGPPAAVEACRRELYTMLADAFRGEFVAVPIPREALHEVATPLRLADAAAXXXXXXXSS-----PRTGDGKRTAAAAGQIAEVLGPMGVAAAACGWRGEGNVQLLADWPCSCVRVRGEAAAVSVAVGEINTALSKWSALAVAAEVEEWMEPELFGKQRKAIKKLSQSMGGVVLNVVDGVCSGRAASEEEARDATRKLEERVSELRARRAVVRVPPEVVTRLTGRGGCSIDKIKERTRATIRIGEGVGGNEVIICGDPSAVAAARREVEAMARGPSKSSPAAQAPKDRQSPDGGVPDAAGDPSPLLPPSPGEGVPQTGTPSXXXXXXXNQNQ--LHAGNAAGGGGQDVDLADRRGGEATAGSVKTA--------------------------EPAGSPP-----------PAVVG------------------------------------------------------------------GSNHPAKGSSASSYRGRLGERDTRVSAATESEAERLLASLLLVDNVAADVGRLSGRSHFSRR 867
BLAST of mRNA_Ecto-sp6_S_contig9.18226.1 vs. uniprot
Match: D7FTS6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTS6_ECTSI) HSP 1 Score: 580 bits (1494), Expect = 5.890e-187 Identity = 374/397 (94.21%), Postives = 382/397 (96.22%), Query Frame = 2
Query: 164 HLCGTGEGVEEARRRLDITIRTTEAVVKASPPLAAALRACRRALLLRLEKEHGVKIFIVGPAAAVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQVAVDVTVCGLPKEIDAARAELEGLDCLELAVPVTRKSLPSIFGSGGANLQQMESEYGVCLDVQTGVSRVVLKGVRAGVESAAEKIRAMSHEFRDTEERWPVEPYQVSFLLRNRGAELKGMAHRVGGGVMMTILEEAKTKAPAAAPTLPAASLSEGEGEEMDEARQPXXXXXXXXXXXXXXXXXSTTSFVWVRGTAPRVSAAGVLLLERLKAAERLTAKVAVREDVVSTFVGHAGSEIRKLRRLCVGCDLGLSPATDGVAEVLLLADDEARLAAAVGLVEKWVHHQQV 1354
++ GT EGVEEARRRLDITIRTTEAVVKASPPLAAALRA +RALLLRLEKEHGVKIFIVGPAAA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GQVAVDVTVCGLPKEIDAARAELEGLDCLELAVPVTRKSLPSIFGSGGANLQQMESEYGVCLDVQTGVSRVVL GVRAGVE+AAEKIRA+SHEFRDTEERWPVEPYQVSFLLRNRGAELKGMAHRVGGGVMMTILEEA TKAPAAAPTLPAASLSEGEGEE++EAR P XXXXXXXXXXXXXX STTSFVWVRGTAPRVSAAGVLLLERLKAAERLTAKVAVREDVVSTFVGHAGSEIRKLRRLCVGCDLGLSPATDGVAEVLLLADDEARLAAAVGLVEKWVHHQQ+
Sbjct: 176 NVSGTREGVEEARRRLDITIRTTEAVVKASPPLAAALRASKRALLLRLEKEHGVKIFIVGPAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAR--GQVAVDVTVCGLPKEIDAARAELEGLDCLELAVPVTRKSLPSIFGSGGANLQQMESEYGVCLDVQTGVSRVVLMGVRAGVEAAAEKIRAISHEFRDTEERWPVEPYQVSFLLRNRGAELKGMAHRVGGGVMMTILEEANTKAPAAAPTLPAASLSEGEGEEINEARHPPXXXXXXXXXXXXXXQ-STTSFVWVRGTAPRVSAAGVLLLERLKAAERLTAKVAVREDVVSTFVGHAGSEIRKLRRLCVGCDLGLSPATDGVAEVLLLADDEARLAAAVGLVEKWVHHQQI 569
BLAST of mRNA_Ecto-sp6_S_contig9.18226.1 vs. uniprot
Match: A0A7S2V6C2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6C2_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 9.520e-15 Identity = 96/343 (27.99%), Postives = 149/343 (43.44%), Query Frame = 2
Query: 2693 VMIRGLPGLVDKARDALVALVLGREDGEVALGEEAAAAAL--GADSWRKIQDSSERVTITPDRSRCSLRVSGPPAAVEACRRELYTMLADAFQGEFVAVPIPREALHEVATPLRLADAAXXXXXXXXXXXXXXXPKTGDGKRTAAAAGQIAEVLGPMGVAAAACGWRGEGNVQLLADWPCSCVRVRGEAAAVSVAVDEIKTALSKWSALAVAAEVEEWMEPELFGKQRKAIKKLSQSMGGVVLNVV-DGVCSGRAASEEEARDATRKLEERVNELRARRAVVRVPPEVMTRLTGRGGCSIDKIKERTRATICIGEGVGEKEVIICGDPSAVAAAKREVEAMAR 3712
V + GL +V AR L ++ G +++ + A L G +WR+I+ ++ VT+ D++ +++ G V +RE Y ML F +F VP+P +A VA+ RL + +AE L L D CSC+RVRG + A A I+ A+++W V++WM P + GK + I KL QS G ++V+ D + + SEE + A LE + + R +++ P+ + L G+GG +I KI+E T ATI G I G AVA K VEA A+
Sbjct: 202 VRVSGLIQMVADARTRLQEIMTNTALGVISIDAQQMEALLATGDANWRRIR-AAHSVTVELDKNENEIKIRGRADDVPNAQRETYQMLDFLFPNQFHHVPVPSQAFSTVASTARLGEVLA-----------------------------LAEGLA------------------LKPDRACSCIRVRGPSEAADQAKAAIEAAVAEWERCNARLSVQDWMLPLIIGKGGQHISKL-QSESGCSIDVLRDLMVVHISGSEEAVKSAKETLEGIIEKARKENVELKIDPDSIGSLIGKGGENIRKIQEETGATINTDRNGGRLR--IRGPEEAVARCKEVVEAFAK 493
BLAST of mRNA_Ecto-sp6_S_contig9.18226.1 vs. uniprot
Match: D8LHP8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHP8_ECTSI) HSP 1 Score: 89.0 bits (219), Expect = 6.560e-14 Identity = 91/303 (30.03%), Postives = 137/303 (45.21%), Query Frame = 2
Query: 2639 SLSAVTGVSYTLSAPARGVMIRGLPGLVDKARDALVALVLGREDGEVALGEEAAAAALGADS---WRKIQD--SSERVTITPDRSRCSLRVSGPPAAVEACRRELYTMLADAFQGEFVAVPIPREALHEVATPLRLADAAXXXXXXXXXXXXXXXPKTGDGKRTAAAAGQIAEVLGPMGVAAAACGWRGEGNVQLLADWPCSCVRVRGEAAAVSVAVDEIKTALSKWSALAVAAEVEEWMEPELFGKQRKAIKKLSQSMGGVVLNVVD-GVCSGRAASEEEARDATR--KLEERVNELRARRA 3523
++S + V + ++I G G+V +A+DA+ +LV G EV +G +G W + ++ D R + V G P VE R+E LA F G+F+AVP+PR AL ++A L AA DG+ P G A G V+L ADWP SCVR+RGE A V A + AL+ W+ L V+ V+ + L + + + +S +MG +L + GV GRA +E+EA++A R KL+ +V L RR+
Sbjct: 287 AISPLQAVGSATPVGHQDILIWGPAGVVGEAKDAVCSLVSGSASAEVVVG----VGRIGRRDRGFWVNCETMPGGGGASLEVDHKRGVVVVRGLPEEVEEGRKEFQDKLASLFPGDFLAVPMPRAALKDLADAQGLTRAASQAGVV-------------DGRDER-----------PDGCDEA-------GGVELWADWPFSCVRLRGEPATVRRAAKALYAALAVWNTLEVSVTVDRAIVTRLLSRSGRILAGISSNMGITLLVEREKGVLRGRARNEDEAKEANRVLKLKLKVAALAQRRS 554
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Stop | 1 |
| Start | 1 |
| Seed ortholog score | 1255.7 |
| Seed ortholog evalue | 0.0 |
| Seed eggNOG ortholog | 2880.D7FTS7 |
| Model size | 4999 |
| KEGG ko | ko:K18756 |
| Hectar predicted targeting category | other localisation |
| Exons | 14 |
| EggNOG free text desc. | RNA binding |
| EggNOG OGs | KOG2208@1,KOG2208@2759 |
| Ec32 ortholog description | K Homology domain, type 1 |
| Ec32 ortholog | Ec-14_001000.1 |
| Cds size | 4146 |
| COG Functional cat. | A |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko03019 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1682350538.416285-UTR-Ecto-sp6_S_contig9:2013445..2014091 | 1682350538.416285-UTR-Ecto-sp6_S_contig9:2013445..2014091 | Ectocarpus species6 EcLAC_371 | UTR | Ecto-sp6_S_contig9 2013446..2014091 + |
| 1682350538.5867028-UTR-Ecto-sp6_S_contig9:2025417..2025624 | 1682350538.5867028-UTR-Ecto-sp6_S_contig9:2025417..2025624 | Ectocarpus species6 EcLAC_371 | UTR | Ecto-sp6_S_contig9 2025418..2025624 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1682350538.4287262-CDS-Ecto-sp6_S_contig9:2014091..2014097 | 1682350538.4287262-CDS-Ecto-sp6_S_contig9:2014091..2014097 | Ectocarpus species6 EcLAC_371 | CDS | Ecto-sp6_S_contig9 2014092..2014097 + |
| 1682350538.4384434-CDS-Ecto-sp6_S_contig9:2014249..2014405 | 1682350538.4384434-CDS-Ecto-sp6_S_contig9:2014249..2014405 | Ectocarpus species6 EcLAC_371 | CDS | Ecto-sp6_S_contig9 2014250..2014405 + |
| 1682350538.4485056-CDS-Ecto-sp6_S_contig9:2014957..2015152 | 1682350538.4485056-CDS-Ecto-sp6_S_contig9:2014957..2015152 | Ectocarpus species6 EcLAC_371 | CDS | Ecto-sp6_S_contig9 2014958..2015152 + |
| 1682350538.4584808-CDS-Ecto-sp6_S_contig9:2015185..2015305 | 1682350538.4584808-CDS-Ecto-sp6_S_contig9:2015185..2015305 | Ectocarpus species6 EcLAC_371 | CDS | Ecto-sp6_S_contig9 2015186..2015305 + |
| 1682350538.4684634-CDS-Ecto-sp6_S_contig9:2015906..2016134 | 1682350538.4684634-CDS-Ecto-sp6_S_contig9:2015906..2016134 | Ectocarpus species6 EcLAC_371 | CDS | Ecto-sp6_S_contig9 2015907..2016134 + |
| 1682350538.4863594-CDS-Ecto-sp6_S_contig9:2017059..2017335 | 1682350538.4863594-CDS-Ecto-sp6_S_contig9:2017059..2017335 | Ectocarpus species6 EcLAC_371 | CDS | Ecto-sp6_S_contig9 2017060..2017335 + |
| 1682350538.5013058-CDS-Ecto-sp6_S_contig9:2018072..2018180 | 1682350538.5013058-CDS-Ecto-sp6_S_contig9:2018072..2018180 | Ectocarpus species6 EcLAC_371 | CDS | Ecto-sp6_S_contig9 2018073..2018180 + |
| 1682350538.5170543-CDS-Ecto-sp6_S_contig9:2018986..2019166 | 1682350538.5170543-CDS-Ecto-sp6_S_contig9:2018986..2019166 | Ectocarpus species6 EcLAC_371 | CDS | Ecto-sp6_S_contig9 2018987..2019166 + |
| 1682350538.5274067-CDS-Ecto-sp6_S_contig9:2019622..2020546 | 1682350538.5274067-CDS-Ecto-sp6_S_contig9:2019622..2020546 | Ectocarpus species6 EcLAC_371 | CDS | Ecto-sp6_S_contig9 2019623..2020546 + |
| 1682350538.5380592-CDS-Ecto-sp6_S_contig9:2020814..2020955 | 1682350538.5380592-CDS-Ecto-sp6_S_contig9:2020814..2020955 | Ectocarpus species6 EcLAC_371 | CDS | Ecto-sp6_S_contig9 2020815..2020955 + |
| 1682350538.548074-CDS-Ecto-sp6_S_contig9:2021412..2021703 | 1682350538.548074-CDS-Ecto-sp6_S_contig9:2021412..2021703 | Ectocarpus species6 EcLAC_371 | CDS | Ecto-sp6_S_contig9 2021413..2021703 + |
| 1682350538.5581794-CDS-Ecto-sp6_S_contig9:2022662..2022887 | 1682350538.5581794-CDS-Ecto-sp6_S_contig9:2022662..2022887 | Ectocarpus species6 EcLAC_371 | CDS | Ecto-sp6_S_contig9 2022663..2022887 + |
| 1682350538.5677986-CDS-Ecto-sp6_S_contig9:2023603..2023801 | 1682350538.5677986-CDS-Ecto-sp6_S_contig9:2023603..2023801 | Ectocarpus species6 EcLAC_371 | CDS | Ecto-sp6_S_contig9 2023604..2023801 + |
| 1682350538.5770123-CDS-Ecto-sp6_S_contig9:2024319..2025417 | 1682350538.5770123-CDS-Ecto-sp6_S_contig9:2024319..2025417 | Ectocarpus species6 EcLAC_371 | CDS | Ecto-sp6_S_contig9 2024320..2025417 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig9.18226.1 >prot_Ecto-sp6_S_contig9.18226.1 ID=prot_Ecto-sp6_S_contig9.18226.1|Name=mRNA_Ecto-sp6_S_contig9.18226.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=1382bp
MESEYGVCLDVQTGVSRVVLKGVRAGVESAAEKIRAMSHEFRDTEERWPV EPYQVSFLLRNRGAELKGMAHRVGGGVMMTILEEAKTKAPAAAPTLPAAS LSEGEGEEMDEARQPPEEEEVEEVEEGGGGSQSTTSFVWVRGTAPRVSAA GVLLLERLKAAERLTAKVAVREDVVSTFVGHAGSEIRKLRRLCVGCDLGL SPATDGVAEVLLLADDEARLAAAVGLVEKWVHHQQVRMVAVGSKIAGMLR TFRAAGVRDRITGANRRQKGSETSGGGGAGGGGGGGGGGGGANSNEGGRA RGDAGEGGDADELFGGVMMDSLVAEGMVRLRGGDEELDRAERLVREFEAD NWTTEAPVAISDEDVLLRKGFLRNMQANQTDVNLHFLRDRGVVVVRGRQE HAESAATLLLSKLHGGGKLDENGIPPCSVSLVAVAPSGMEALTARGRLHL KRLSADTGTEMHVVPAASVVRIRARGRDPEAVAEAKRALLRFVGGHRAEV FLDLAKIVSGASPPAQRSSSGGGGGSEGKAGAEAMEEVVSGGGGGGSGVG RDGGVGASAADAKKAVRTPVSSVSNKIIRRTVKLHGCEAEFVAAPPPSPP VPSNTASGGRGGVNGNGNRRGGSGAGAERHRHGPHKSGPGRQDAGGRGAG VGATATADGTHDDGSLSAVTGVSYTLSAPARGVMIRGLPGLVDKARDALV ALVLGREDGEVALGEEAAAAALGADSWRKIQDSSERVTITPDRSRCSLRV SGPPAAVEACRRELYTMLADAFQGEFVAVPIPREALHEVATPLRLADAAA AAAAAAAAAATTSSPKTGDGKRTAAAAGQIAEVLGPMGVAAAACGWRGEG NVQLLADWPCSCVRVRGEAAAVSVAVDEIKTALSKWSALAVAAEVEEWME PELFGKQRKAIKKLSQSMGGVVLNVVDGVCSGRAASEEEARDATRKLEER VNELRARRAVVRVPPEVMTRLTGRGGCSIDKIKERTRATICIGEGVGEKE VIICGDPSAVAAAKREVEAMARGPSKSSPAAQASKDRQSQDGSVPDAAGD PSPLLPPSRGEGVPHTGTPSPLPPSPQTQNQNQLHAGNAAGGGGQDVDLA DRRGGEATPGSVKTAGAVPKLDGEGFRRGVEDQERVAEEQQPPVVTPPGG RGDARQAPGPSASGSTRRPLGDRDASSSGGGSNNSSSSNSSSSTGSGSFG TKERDVPRGGGGSTGVAAEPAGSPPPAVVSGSHHPAKGSSASSYRGSLGE RDTRVSAATESEAERLLASLLLVDNVAADVGPLSGRSHFSRRRREGAEAT TGVGAGLRQPPPPPPFSGSGDTGGHRATPAATAAAGGLVVGSATPACNGS PSPSLLPVGGGVAPACGGGYFTSSSGIRVRL* back to topmRNA from alignment at Ecto-sp6_S_contig9:2013446..2025624+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp6_S_contig9.18226.1 ID=mRNA_Ecto-sp6_S_contig9.18226.1|Name=mRNA_Ecto-sp6_S_contig9.18226.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=12179bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:2013446..2025624+ (Ectocarpus species6 EcLAC_371) AATCGAGTCTGTGGGTCCACAGCGGCAGCCCGGGTCTGGCCCCACAAACC
CCACTACCGCCTTGCCCGGTGGCAGCGGCAGCGGCAGCAGCGGCTCCACC
AATCGTGGAGGCAGCAGCAACAGCGGTGGCGGCGGGGGCGGCGTCGGTGA
CACTTTGATCCTACACCTGTGCGGAACCGGCGAGGGAGTCGAGGAAGCCC
GGCGCAGGCTTGACATCACCATCCGCACGACGGAGGCGGTGGTGAAGGCC
TCGCCCCCGCTCGCCGCCGCCCTCCGCGCGTGCAGGCGCGCCCTGCTGCT
CCGCCTGGAGAAGGAGCACGGCGTCAAGATCTTCATCGTCGGCCCCGCCG
CCGCCGTTGATGTCGATGGCGGCGGCACCGGTGCTGCCGGAGATAGCGGC
AAAGGTGGTGGTCGCGCGGAGCATCAGTCGCGCGGTAGAGGAGACGGCGG
GGCGAGGGCGGCGGCGGCGGCGGCGGCGGCGGCGCGGGGACAGGTGGCCG
TGGACGTGACGGTCTGCGGGTTGCCGAAGGAAATCGACGCGGCGCGGGCG
GAACTGGAGGGACTCGATTGCCTGGAGCTTGCTGTACCCGTCACCCGAAA
GTCTTTGCCTTCCATCTTCGGCTCCGGGGGTGCCAACCTCCAGCAGATGG
AGGTGATAACTTATGCAGAGACTACCACGCGTGCCGCCCCTTTGACCGTC
TTCGGTAGAGCGTGCTACTGCAGTTCGTAGCATATCGATTTCCCTAACAG
CAGCGCGTTCTCGGCGCACCCCCCCCCACCGCCCCTCGATGCCGCACACG
GCAGTCGGAGTACGGCGTGTGCTTGGACGTGCAGACGGGTGTGTCCCGGG
TGGTGTTGAAGGGGGTTCGAGCAGGTGTGGAGTCGGCGGCGGAAAAGATC
CGAGCGATGTCCCACGAGTTCCGGGACACGGAGGAGCGGTGGCCGGTGGA
GCCGTACCAGGTGTGTTCGGGGGCTAGGGTTAGGTGGTGTAGCGGCGGCG
GTAGTGGCGGCGGTTTTCTGTGTTGGCCGGTGGCAGGCTTTGGCTGGAGA
AGGTTTCACACACGTGGTTTAACATGGGGTGTCTGCGTCCCTCCCTGTGT
GTCTTTTTCCGTCTCTCTCTCTCTGCAAGGTGACTGTTAGATGCGTGGGT
GTTCGTTGTGAAGATTTGTTTGTGCTGATGTGGGTGGCTGGTTGGAGTGT
TCGTGCCCCCGCCGCCGCCGCGGTCGTGTTCTCACCCGTGCGTAGGATCC
CTCCCCCGCCCCTCCACCCCTAGGGTTGCGGCACCCACCCCCCGGAGGAG
CATTCAGCCCCTTTCACGGACTCACGCTGCCGTATTGAACACAAGAAGTC
CGGCGGCGATGTAGCCACCCCGTAGTGTCGTCCGGCAGCGTATCCTCGAG
CTACCGGCCGTGACTGCGCATACAAGACAATACACAAGCTTGTACATCTC
CCGCCCAATCACCCCCTCCCTGTAACTGGAACGATGCGCCACCAAAACAA
ACTGTCCCCAAGGTCTCCTTCCTACTCCGCAACCGCGGAGCGGAGCTCAA
AGGCATGGCCCACCGGGTAGGGGGTGGCGTCATGATGACCATCCTCGAGG
AGGCCAAGACCAAGGCGCCGGCGGCGGCGCCCACGTTGCCCGCGGCATCG
CTCTCGGAAGGAGAAGGGGAGGAGATGGACGAAGCCCGCCAACCGCCAGA
GGAGGAGGTGGAGGAGGTGGAGGAGGTGGAGGAGGTGGAGGAGGTGGAGG
AGGTGGAGGAGGGAGGGGGGGGGAGTCAGAGCACGACGTCGTTCGTCTGG
GTACGGGGTACGGCTCCGAGGGTGTCGGCGGCCGGCGTGCTGCTGCTGGA
GCGCTTGAAGGTGAGGCTCCGCTGCGGTTTGTCGAGCCTCGTCCTCGGCC
ACGACGTGCGTTTGTGCTGTTTTTGGGCTCGTGGGGTGACCTGTCGGCAC
GGGTTTTTGTTCTGGTTGAATGGGCTCTGTCTTTTTTTTTTCTTCCTTTT
TCCAGCTGCCACCCACTCTCTACCAGCCACACCATCTCCAGAAACAAAGA
CACAAGAGTGTCTCGGTGGCTTCTCGGATTCTATCAGAGCGGCGAAAATA
ACGCTGCCCGCCTTCCGACGACGAACCAAAAAAAAAGCGCACAGCTTCGA
GGACGCTCTTTAGCCGAAGCAAGGCGCAATTACAGTCTTCTCCCCGTGAC
AGAGAAGAATATTAGTCGTCACTCTCCAAAAAACGCCGACCTGGACGAAT
CAGCCCCCCCCCCCATGATTTGCGCGTCCAGAGGGAATGTTCCTGGAGGC
CGGTCAAACGACGAACGCTAGCAATGAAAGACCCCCCCCCTCCCCTCCCC
GTGCTCCTCTCGGCGGCGCTGTTCTCGACTGCGGGGCACTTGACGTGACG
GTATGACCCGTGCACGCGCCACCGTACCGTACCGTGCCACGTACCACGTA
CCACGGGTCAGGCCGCCGAGCGCCTGACGGCCAAGGTTGCCGTCCGGGAG
GATGTCGTGTCGACCTTTGTCGGCCACGCCGGGTCGGAGATACGGAAGCT
GCGGCGCCTCTGCGTCGGGTGCGACCTCGGGCTGTCGCCGGCGACAGACG
GCGTGGCTGAGGTGTTGCTGCTGGCGGACGACGAGGCTAGGCTTGCCGCC
GCCGTCGGCCTGGTCGAGAAGTGGGTCCATCACCAACAGGTTCGGACCTC
TGGGATACGCCGGTGACTTTTTGGTGCTGCGACTAATGACCGACAGATTT
TCTAGAGGTGTTCTGCTAGCAGTCTGCTACATTGACTGCAGCGGGTCCAA
ACCGCAAGCTTGAAGTCGAGGCTCGTTTTCGAGTGCAGTACTGAAGCTGG
TTCTTCAGCTAGAGCTGTCGCCCGCAGCTACTTACTTCAGATCCAAGCTC
ACCGCGCTCCTATTTAAGCGATGAATTGAAGTGGACTCGTCAACATCGGG
TTCGAGCTACTACAGCAACAATCACCGGATGGATATGTAGACATACGGTG
GTACAACTGCATCAAAAGACTCGTTGTATTGTGTGCCGATGGGCTCCCAA
GCCGATCAACTATCCTCAAGGCCGGGGCTACTGTTTTCCCTTTTACCACA
TATCATTTAGTTCTTCACGCTATTTGGCACGGAGCTTAGTGCTTGGGGAA
GCGTCGACGGGCGAGATCAGTCGACGTCCGTTCGAAGAGCGAGTAGCCGG
GTCTAGTCTCGTAGCTTTGTTTTGCGTTGCAAATGTAGGAGCTATGATTC
CAACTGCGAACAAAGACTAGCTGTTGCAGCTGCGTCCGTGAGGTGTAGAT
GCTGTTGTCTTCCGAACCTTTCGCAGAAGGGTACTTTCGGTTTATCTCCA
CCACCCCCGTAGTAGAGGTAAGCAGGGGGGAGCACGGGCGGGATGAACGG
CGGGGTGGCTGCGTGTGCGTGTCTGGGCAACAGGTTCGGTGTATGCTACA
CATGTTGCACAAGCGGTGCCGCGTCTCCCGCTCCCCACGCCACGACCTAC
CACCTAGCGCGCATCTAAATACCACCAGTGTGGTACAAGCAGAATGGCAT
ACGCAAGGCGTCCGATGACGCCACCGCCGCCCTTACCCTCCCGCTCCTCC
TTCGACCTCGGCAGGTTCGGATGGTGGCCGTGGGGTCGAAGATAGCCGGG
ATGCTCAGGACTTTCCGCGCCGCGGGAGTGAGAGACAGGATTACCGGGGC
TAATCGGCGGCAAAAGGGGTCGGAGACAAGCGGTGGCGGTGGCGCCGGCG
GCGGCGGCGGAGGAGGAGGAGGAGGAGGAGGAGCGAACTCGAACGAGGGC
GGGCGGGCGAGGGGTGATGCGGGTGAAGGAGGAGACGCGGACGAGCTGTT
CGGAGGCGTGATGATGGACTCCTTGGTGGCGGAGGGCATGGTGAGAGAAA
AACGGGGTCCGGGGACTGGAGAAGGGGGGACGTGCTCTCTATTTTGCATG
CATTTAGCTGTTTAGACCATTGACCGGGCATCCTTGAGAGGACGGAGCAT
TGTTCCCACAGGACCGATGGCCAAAAACAACCGTTCCTTCCTTTTTGGCT
AGAGGGTATTCTCATTGTCATGTATGCTCAAGAGGTAGGTAAGGTGTTGT
TCTCCTTAGCCCCTTGCATCTCTTGTATGTTTTGTGCCGGAACGAAGGGC
CTCGGGAGTTTCGGAGAACACGTCGGGTTTTCGACGGGACCGGGCAGGCA
TTCTTTCCACCAAGTGTTTGTCGCGGTGTGAGTGTGGGACATACATTCAG
GCCAGTCGAATCAAGGGCGGGTCGCAGTATCCCCAGTTCTGCCAGGCTTG
ATATGTTGGCTTGCGGGAAAGGGGGTGGGGGGATTCGCACCACCTGTGGC
AGGCGGGCCATTGTTGATTTTCGTCGGAGCGTGCTCTTAGTCGTCTTCTT
CATCTTCTCCCTTGGTGATCGGTTTTCGTTCCAGGTGTCGGGGTCATCCG
TTGGGGTCATCCGTAGATAGATTGGGCTCAGACACCGACCCTCACGGCTG
GTGCTTCACCCCCCTGCGGAATTTAGCACAAAGTAAACACAAAACGTCTT
TTTTATACGTATGTGTGACAAGAACAACAAATACCTATCACGACTGCCGA
ACGCTCGACGCTTTCGGGTGGCGCCAGGTGAGACTAAGGGGCGGGGACGA
GGAGCTGGACCGTGCGGAACGCCTCGTGAGGGAGTTCGAGGCGGACAACT
GGACCACAGAAGCACCTGTAGCGATCAGCGATGAGGTACGGTGCGCTGTG
TGAGCACATCGCCGGGGTTGTGAAAACCATTCACACGACGTCTTTTGTAC
AACAGTTTTTTTTTCTTCTCCTTTTGCGTATTGAAAATACGTTCGGCGTG
GCCCGTGAGCAAGGTGGGTGTGCCTAGAGAGCGGGGAATAGTTTAGCATT
CATGAAGCGTGGGGTGGTTTTGCGTTTGTTGTTGTGGTTGTTGCTGTCAT
GTACTCTCGGCCATCGTCACGTCCGCGCACCGCGTTAATTTAAACTGGTT
GGTCAAACACCCTCGAGGCAGTTACACAGCAGTGCTTATAGAGTAGTGGG
CCCTCAATAACGCCGGCATGTGCCTGGCGAATCAGCCGGCGCTATTCAAT
GGATAGAATGGCGTGGTGATTCAGTCTGTGCCGAGCAATTTCACTGGCGC
GATGCAGGGCCACCGGCGCCAGTCAACCGGCTTTGCTGACCCCCCCTCAC
TGCAAATGTCCCTGGAATTGAAAGCATCAGAAATAAATCGAACCAATGGC
AGCTGTCATCCGTATGCAAGGAAGAAGCAAGCACAAGATACCGAACACGC
TTAGCAGGATGCAGCGCACCTCCATGCGACTCGCCAAATACCGCACGTGA
TGCCATGAAGTCGACCATTCCGCCATTAAACCACCAACACTACCAGGGAA
TATAAGTCCACGAAGTGACAATTATATCGTTTCACCATCCCGTCATCCCA
TGTACTCATCATTCCGCCATGCAATCCTTTCGTCACGTAATTCCACGAAG
TGACCATTCCGTCATTCCATATGTGATCCCCTCGTGGCCAGGACGTGCTG
CTTCGGAAAGGTTTTCTCCGGAACATGCAGGCCAACCAGACCGATGTCAA
CCTCCACTTCCTTCGCGATAGGGGAGTCGTTGTGGTGCGAGGTCGGCAGG
AGCATGCCGAAAGCGCGGCGACCTTACTGCTATCGAAGCTGCACGGAGGA
GGGAAACTCGATGAGAACGGGGTGAGAGAGGTAGATAGAGAAAGGGACAC
AGAGAGAGAGATGGAGAGAGTGGATGAGGTTCAGACGGACAGTATGAAAA
GGAGGGAAAGGGAGAGATGGAGAAAGAGAGAGAGAGATTGTTGTTTGCAA
CGCTGCTTTCAAGACCGCAAGAGTTCGTCATGCGCAACCGAAGGAAGAAG
GGAACATGGGCTGAAGGACACACCTGGGCTTGGATATAGAACACGCGTGT
TTCTTTCAGGAGGCGTGCTGACATAAAGCAGAAAACATGGCTGCTGGGCA
AGTGCACTAGGCGAGATACAGGCGAACAATGCACCGGTTGCTCTCTCGCC
CTCGTCCGGTACTTCAAGCGTTTGATTCTTGTTTCGCCAACGCTTTTCCA
ACCCCCAACCCCCCTCTCCCCGTCCGCGCACGTCTTCCGTTCTCTCCCCC
CTTCTCTCTGCTTCCCCGCCCACCTAGATACCTCCTTGTTCAGTGTCCTT
GGTTGCCGTGGCCCCATCCGGCATGGAGGCCCTCACGGCTCGCGGCCGTC
TGCACCTGAAGAGGCTGTCCGCCGACACCGGGACCGAGATGCACGTTGTC
CCCGCTGCGTCCGTGGTTAGGATCAGAGCCCGGGGCCGGGACCCCGAGGC
CGTGGCGGAGGCCAAGAGGGCCCTCCTGAGGTTTGTAGGGGGCCACCGGG
CGGAGGTCTTCTTGGACCTAGCCAAGATTGTGTCGGGCGCGTCTCCTCCG
GCTCAACGTTCTTCCAGCGGCGGCGGCGGCGGTAGCGAAGGCAAGGCCGG
AGCGGAGGCGATGGAAGAGGTGGTCAGCGGTGGAGGCGGTGGGGGCAGTG
GCGTTGGCCGGGACGGAGGTGTCGGGGCTAGCGCGGCTGACGCCAAGAAG
GCCGTACGGACGCCGGTAAGCTCGGTGAGCAACAAGATCATTCGGAGGAC
GGTGAAGCTCCATGGCTGCGAGGCGGAGTTTGTAGCGGCCCCGCCGCCGT
CGCCGCCGGTGCCCTCCAACACCGCTAGCGGCGGCAGGGGCGGCGTCAAC
GGCAACGGTAACCGCCGCGGCGGGAGTGGTGCAGGAGCAGAAAGACACCG
CCACGGCCCTCACAAGAGCGGGCCTGGCCGTCAAGATGCCGGCGGTCGAG
GAGCGGGGGTCGGAGCCACCGCAACCGCCGACGGTACCCACGACGACGGG
TCACTGTCCGCGGTGACCGGTGTGTCGTACACTTTGTCGGCGCCGGCGAG
AGGGGTTATGATTCGGGGCCTGCCCGGACTGGTGGATAAGGCTCGAGACG
CGCTGGTTGCTCTGGTTTTGGGACGGGAAGATGGCGAGGTAGCGCTGGGG
GAGGAGGCTGCTGCGGCGGCTTTAGGAGCGGACAGCTGGAGGAAAATCCA
GGTGAGAGGAGCATGTGTTTGTGATCCATGCGGCATTGCTTTTTTTGGTG
GTCCTTGTTGGGTGTTACTTTCGTGCACGAGGCCGTTCTCTCCTTCCAGG
TTGGTTTGCTTTGTTCTTAGATGGCTTCGTTTGCCTTGGTGCTGATCCAT
GCGGCGTTTTTGTTTGGTATTTATTTTTGTTGCCACATGCACGAGAACGT
TGAAGGTGGCATTGCTCCGACCTGCTCGTGCGCATGTTTCCGCTCTTCGA
TTCGTACCCTCGTCCTCAGGATTCAAGCGAAAGGGTCACCATTACCCCGG
ATAGGTCGAGGTGCTCGCTTCGAGTCTCCGGCCCACCGGCGGCGGTTGAG
GCGTGCAGGAGGGAGTTGTACACCATGCTCGCGGATGCGTTTCAGGGAGA
GTTTGTCGCGGTGAGCGTCGTTAGTCTGTCTGTCTGTTTGCCTCTCTCGC
CGTCTCTCTCTCCAGGTAGTATAATCTCCAGGTAGTATAATAGCGTCATT
GTTCAGTTTCGGTGGCGACTTATTTTACTTGTTCTTCGCAAGGGAGGTGT
TGTTCAGCCGTACGTGCCACGACTCCCAGTTGAAAGTTCAAAGCTTCTCT
CGTCTATGCCGTCGCCTCGGCTCTACCCGGCCGGCATTCTCCCGGTCATG
TCAGGGGGAAAGAGGAGAATATTGAAGCAGCCGCACAGGAGAACGGCGTG
CTCATCTGCTTTCACACCGCAGACCAGCCTCCCTGGAGTGAAACCCATGG
CATGTACTTGTACCATCGCCATGTGACGCCGTGCGGGAAAAGAAGAAGTC
GACTGTTCCATTCGTGCGGCGATCTCACATCAAACTTTCTAAACCAAATC
GCTTCCCTGCCCACCAGGTGCCCATCCCACGCGAGGCCCTCCACGAGGTA
GCCACCCCCCTTCGCCTTGCCGATGCCGCCGCCGCCGCCGCCGCCGCCGC
CGCCGCCGCCGCTACGACCTCCTCGCCAAAGACCGGCGATGGCAAACGAA
CGGCGGCGGCAGCGGGGCAAATAGCGGAGGTTCTGGGACCTATGGGAGTC
GCTGCAGCGGCGTGCGGGTGGCGGGGCGAAGGCAATGTACAGCTCTTGGC
CGACTGGCCGTGCTCGTGCGTTCGTGTGAGGGGGGAAGCAGCGGCCGTGA
GCGTGGCGGTGAGACTACGGGGGGATCCGGGGGTTGTGTGGGAAGGCTTG
GGTGTACATCAACTTGTTTGGGCGCCGGCGGTGTGTTGAGGGAGTGGTAG
CGGGCGGGGGGCCGGGGGATTCGCAGGCCTAGAGCGGGGAGGTGGGTGTA
CTCATAGTCGTGCATGCCGTAGTCGTTAGACCATTGACCTCGCATCCCGG
GTTCTCACCGGGCCAGGCTCTGACTCACATCACCAAGCGCGAATCGCCGT
GAGGTGTTCGGCGAGTCGCATCGAGGGTGCGCTGCATCCTGCTAAGGATG
TTCGGCATCTTGTATAGAGTGGGGAGGGGGGGTGGGTAATTTGTGGTTGA
TTGCGGATGGAGGTGTGTCGCTGTGGAGTTGTGCTGCGGTGGAGGCGGTA
AGACCGCACCAGTAAGGCCGGTCGCCCTGTGAAATTGCGTGACACAGATG
CGTTATTCAACTTATCCCATACTCTGAATTGTGCCGGGGGGCCGGTACAA
GGCCGACCAAATCCCTTGGAACTGTTATGCGGCCTTGTACAGGGACTACC
GTTCGTGCCGCTCCCCGAAACACCACGGTGCTTTGCCCTTTTCGCTCGGT
GCCTGCGCTGCCGCGGTCCGGCGAAAAGCTGGCGTGTGCCGCCCCAGCTC
TGCTGGGATGCGAGGTTTACGGTCTAGCGCCTACAGAAGGCGCCTCCACT
GTTAGAGGCTCTTGTCTTGCCGGTAGGGTCACCCAACACCAACCACATAT
GGGTGATAGTGTAGGCTTCTTAACTGAACACCTGTTCACATCGACAACCT
CTTCCTTGTGGGATCTTGTTGAGGCTAATGTATTAAGTCCCAGGTTCTCA
ATGTGAATGTGGCAAGTTCTGCGTGTCATGCGTCAAACGAGATACCCTCC
CCCCCCGCCGCCGCCGCCGCCCCCGCCGCCTTGGCCATGAAACTTCTCGA
CCCAACGAAAACACAAGGTGGACGAGATCAAAACTGCACTGTCGAAGTGG
TCAGCCCTGGCCGTTGCCGCGGAGGTCGAGGAGTGGATGGAGCCGGAGCT
GTTCGGCAAGCAGCGCAAGGCCATCAAGAAGCTGTCCCAGAGCATGGGAG
GTGTTGTCCTCAACGTCGTCGACGGCGTGTGCAGCGGGAGAGCCGCGTCC
GAGGAGGAGGCTCGGGATGCGACGAGAAAGCTCGAGGAGCGGGTGAGGGA
GGGGATACCCCGGTCGATCCGCCCGGGGGGTGCGGGTGGAAGTTGTGGGA
CGCACAGCGGTACGCTGGCCCTGTTTTGGCGACCTCTTTTGGACACTGGA
CACCTTGCTAGCGTTGCTGGGGATGATTTTGTTTTTGTGGTATGGTTGTG
GAGGGACTGATTGAGGTGGGGCCGGAAGAGGAGGATGGGACCGGGCGTGC
CTTTGAGGCATGGCGGTGTCGTCGAGTGCTGTTGAATGCATTTCTCATTA
CCTACAAAGACCGGGTAAGGCTCGGTCTGATAACATCGTCTTTTCCCAAC
GGTTGTTCGTGTTTTTCTTCCAGATAAAAAAATCATCGATTGTTGGGCAC
GAGAAAACATCCCGAAAGAAAACATCCCGAAACGGGAGAATCGAACGTGT
ATTTTTTTTTCGTGGTCACAAAATTTCAAAATAAGGATAGTCGTGATTTG
TTGGGAGAAAGCAACTCGATAAGAACGTGCCCAACTCGCCGAGAAGACCC
ACAACATCGCGATAACCTATCCGGTGCAGGAGTACGTCTACCGAACCAAG
AAGGAGTCATTTATGAATTATTCAGGCCCTCAGTCCAGAAAAAAAATGTG
AATGTTCCCGTTCCGCCGCCGCCCCATCTCTCTCCCTTACTATGCGGAAC
TTGTCCTGACCACTGTCCCCTCTGCCATCCGGTCGCAACCGACGACAAAA
AAAAATAGGTAAACGAGCTACGAGCTAGGCGGGCAGTGGTGCGAGTGCCC
CCGGAGGTTATGACCCGGCTAACAGGCCGAGGGGGATGTAGCATCGACAA
GATCAAGGAGAGAACGCGCGCGACCATATGCATCGGGGAGGGGGTAGGAG
AGAAGGAGGTTATCATCTGCGGGGACCCCTCCGCTGTCGCCGCGGCCAAG
CGCGAGGTGAGTGATTTACTCCCGCTGCCCACTCAGAGTCTGGAGCGCGT
ACACGCCCCTCGAGCTCAAAGTCCGCGTGTTGTTGGTCGGGAAGATTTGT
ACATGTTGGTAAGGTGCTTGTTTGTTCGTTGGCGTTCGTGCCTTGTATCG
ATATTTTCTTTTTTATGTCCATGAATAGGCACACCGCCCTCACCGCTCCG
TGCTAGGGTGATAGATGGGGTCCCGTTCCCTGAGCACAGCGGGGGAGCAG
CACGCAGCACGGCTTCACAAGGTGCTGCCCCGGTGCCACGTTTATATCCC
GCCGACATTTTCGGCCTTCCAGCAGTTGCAGGCCACGACGGCGTTGCGAG
GAAGCTGCCCCCGCCATCAAGGTCGTTATTTTTTCCTTGGCGAAACACGC
CCTATAACTCCAAAATCCCCGTACTTCTTCAGAAGATAAATCTTTCTGGT
TGTTTATCTGATGCAAGGACACCTCACGCGTGACCTCCACCGAAACCTAA
CCCTACCAACAACGACCTCCATAGGTGGAGGCAATGGCTCGCGGGCCGTC
GAAGAGCAGCCCTGCGGCCCAGGCCTCCAAGGACAGGCAGAGCCAAGACG
GCAGCGTTCCTGACGCGGCCGGGGACCCTTCGCCGCTCCTGCCGCCTTCC
CGAGGCGAGGGGGTGCCGCACACGGGAACCCCGTCGCCCCTGCCCCCATC
GCCGCAGACCCAGAACCAGAACCAGCTGCACGCCGGCAACGCTGCGGGCG
GCGGGGGTCAGGATGTTGATCTGGCGGACCGACGGGGGGGTGAGGCGACG
CCGGGTTCGGTGAAGACGGCGGGTGCGGTCCCGAAGCTGGACGGCGAGGG
TTTCCGCCGCGGCGTAGAAGACCAAGAACGGGTCGCCGAAGAGCAGCAGC
CCCCAGTCGTGACCCCGCCGGGCGGCAGAGGCGACGCGCGACAGGCGCCG
GGGCCGAGCGCCTCGGGATCGACCAGGCGCCCGCTTGGCGATCGTGATGC
CTCCTCCAGCGGGGGCGGCAGCAACAACAGCAGCAGCAGCAACAGCAGCA
GCAGTACCGGCAGCGGGAGCTTCGGAACGAAAGAGAGGGATGTTCCCCGG
GGCGGCGGGGGTTCTACCGGGGTTGCGGCAGAGCCGGCGGGGTCACCACC
ACCCGCCGTCGTGAGCGGCAGCCATCACCCGGCCAAGGGTTCTTCGGCGT
CGTCATATCGAGGGAGCCTCGGCGAGCGTGACACGCGGGTGTCGGCGGCG
ACGGAGTCGGAGGCGGAGCGCCTCCTTGCCAGCCTTCTCCTCGTGGACAA
CGTGGCGGCGGACGTGGGGCCGTTGTCGGGCCGGTCGCACTTCTCGCGCC
GCCGTCGCGAAGGGGCGGAGGCGACGACGGGCGTGGGTGCCGGCCTGCGA
CAGCCGCCGCCGCCGCCGCCGTTTTCTGGTTCTGGCGATACCGGCGGACA
CAGAGCGACACCCGCTGCTACTGCCGCCGCCGGCGGTCTCGTGGTTGGAT
CCGCTACTCCGGCCTGCAACGGCTCACCGTCGCCGTCGCTGCTGCCGGTC
GGAGGTGGCGTGGCCCCGGCTTGCGGAGGCGGGTACTTCACGTCGAGCAG
CGGGATTCGGGTTCGCCTCTGAACGGGACAGGGAAAGTTACTGGTTGTGG
CCGGGCGGGAGTGCTGACCTTTCGTGATGGTCAACAGGAAGGAGATGAGG
GTGATGCCACAGGGTGGCGCGCAATCAGCTTGCTGATTGGTCAATTTATT
GATTGGCAGATAGGTCGTGTGGCAGTTTTCGGGGGAGCGTGCCGTCTTTG
GACGAGCTTGATGTTTTTTTTTGTTCGGG back to topCoding sequence (CDS) from alignment at Ecto-sp6_S_contig9:2013446..2025624+ >mRNA_Ecto-sp6_S_contig9.18226.1 ID=mRNA_Ecto-sp6_S_contig9.18226.1|Name=mRNA_Ecto-sp6_S_contig9.18226.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=4146bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:2013446..2025624+ (Ectocarpus species6 EcLAC_371) ATGGAGTCGGAGTACGGCGTGTGCTTGGACGTGCAGACGGGTGTGTCCCG GGTGGTGTTGAAGGGGGTTCGAGCAGGTGTGGAGTCGGCGGCGGAAAAGA TCCGAGCGATGTCCCACGAGTTCCGGGACACGGAGGAGCGGTGGCCGGTG GAGCCGTACCAGGTCTCCTTCCTACTCCGCAACCGCGGAGCGGAGCTCAA AGGCATGGCCCACCGGGTAGGGGGTGGCGTCATGATGACCATCCTCGAGG AGGCCAAGACCAAGGCGCCGGCGGCGGCGCCCACGTTGCCCGCGGCATCG CTCTCGGAAGGAGAAGGGGAGGAGATGGACGAAGCCCGCCAACCGCCAGA GGAGGAGGAGGTGGAGGAGGTGGAGGAGGGAGGGGGGGGGAGTCAGAGCA CGACGTCGTTCGTCTGGGTACGGGGTACGGCTCCGAGGGTGTCGGCGGCC GGCGTGCTGCTGCTGGAGCGCTTGAAGGCCGCCGAGCGCCTGACGGCCAA GGTTGCCGTCCGGGAGGATGTCGTGTCGACCTTTGTCGGCCACGCCGGGT CGGAGATACGGAAGCTGCGGCGCCTCTGCGTCGGGTGCGACCTCGGGCTG TCGCCGGCGACAGACGGCGTGGCTGAGGTGTTGCTGCTGGCGGACGACGA GGCTAGGCTTGCCGCCGCCGTCGGCCTGGTCGAGAAGTGGGTCCATCACC AACAGGTTCGGATGGTGGCCGTGGGGTCGAAGATAGCCGGGATGCTCAGG ACTTTCCGCGCCGCGGGAGTGAGAGACAGGATTACCGGGGCTAATCGGCG GCAAAAGGGGTCGGAGACAAGCGGTGGCGGTGGCGCCGGCGGCGGCGGCG GAGGAGGAGGAGGAGGAGGAGGAGCGAACTCGAACGAGGGCGGGCGGGCG AGGGGTGATGCGGGTGAAGGAGGAGACGCGGACGAGCTGTTCGGAGGCGT GATGATGGACTCCTTGGTGGCGGAGGGCATGGTGAGACTAAGGGGCGGGG ACGAGGAGCTGGACCGTGCGGAACGCCTCGTGAGGGAGTTCGAGGCGGAC AACTGGACCACAGAAGCACCTGTAGCGATCAGCGATGAGGACGTGCTGCT TCGGAAAGGTTTTCTCCGGAACATGCAGGCCAACCAGACCGATGTCAACC TCCACTTCCTTCGCGATAGGGGAGTCGTTGTGGTGCGAGGTCGGCAGGAG CATGCCGAAAGCGCGGCGACCTTACTGCTATCGAAGCTGCACGGAGGAGG GAAACTCGATGAGAACGGGATACCTCCTTGTTCAGTGTCCTTGGTTGCCG TGGCCCCATCCGGCATGGAGGCCCTCACGGCTCGCGGCCGTCTGCACCTG AAGAGGCTGTCCGCCGACACCGGGACCGAGATGCACGTTGTCCCCGCTGC GTCCGTGGTTAGGATCAGAGCCCGGGGCCGGGACCCCGAGGCCGTGGCGG AGGCCAAGAGGGCCCTCCTGAGGTTTGTAGGGGGCCACCGGGCGGAGGTC TTCTTGGACCTAGCCAAGATTGTGTCGGGCGCGTCTCCTCCGGCTCAACG TTCTTCCAGCGGCGGCGGCGGCGGTAGCGAAGGCAAGGCCGGAGCGGAGG CGATGGAAGAGGTGGTCAGCGGTGGAGGCGGTGGGGGCAGTGGCGTTGGC CGGGACGGAGGTGTCGGGGCTAGCGCGGCTGACGCCAAGAAGGCCGTACG GACGCCGGTAAGCTCGGTGAGCAACAAGATCATTCGGAGGACGGTGAAGC TCCATGGCTGCGAGGCGGAGTTTGTAGCGGCCCCGCCGCCGTCGCCGCCG GTGCCCTCCAACACCGCTAGCGGCGGCAGGGGCGGCGTCAACGGCAACGG TAACCGCCGCGGCGGGAGTGGTGCAGGAGCAGAAAGACACCGCCACGGCC CTCACAAGAGCGGGCCTGGCCGTCAAGATGCCGGCGGTCGAGGAGCGGGG GTCGGAGCCACCGCAACCGCCGACGGTACCCACGACGACGGGTCACTGTC CGCGGTGACCGGTGTGTCGTACACTTTGTCGGCGCCGGCGAGAGGGGTTA TGATTCGGGGCCTGCCCGGACTGGTGGATAAGGCTCGAGACGCGCTGGTT GCTCTGGTTTTGGGACGGGAAGATGGCGAGGTAGCGCTGGGGGAGGAGGC TGCTGCGGCGGCTTTAGGAGCGGACAGCTGGAGGAAAATCCAGGATTCAA GCGAAAGGGTCACCATTACCCCGGATAGGTCGAGGTGCTCGCTTCGAGTC TCCGGCCCACCGGCGGCGGTTGAGGCGTGCAGGAGGGAGTTGTACACCAT GCTCGCGGATGCGTTTCAGGGAGAGTTTGTCGCGGTGCCCATCCCACGCG AGGCCCTCCACGAGGTAGCCACCCCCCTTCGCCTTGCCGATGCCGCCGCC GCCGCCGCCGCCGCCGCCGCCGCCGCCGCTACGACCTCCTCGCCAAAGAC CGGCGATGGCAAACGAACGGCGGCGGCAGCGGGGCAAATAGCGGAGGTTC TGGGACCTATGGGAGTCGCTGCAGCGGCGTGCGGGTGGCGGGGCGAAGGC AATGTACAGCTCTTGGCCGACTGGCCGTGCTCGTGCGTTCGTGTGAGGGG GGAAGCAGCGGCCGTGAGCGTGGCGGTGGACGAGATCAAAACTGCACTGT CGAAGTGGTCAGCCCTGGCCGTTGCCGCGGAGGTCGAGGAGTGGATGGAG CCGGAGCTGTTCGGCAAGCAGCGCAAGGCCATCAAGAAGCTGTCCCAGAG CATGGGAGGTGTTGTCCTCAACGTCGTCGACGGCGTGTGCAGCGGGAGAG CCGCGTCCGAGGAGGAGGCTCGGGATGCGACGAGAAAGCTCGAGGAGCGG GTAAACGAGCTACGAGCTAGGCGGGCAGTGGTGCGAGTGCCCCCGGAGGT TATGACCCGGCTAACAGGCCGAGGGGGATGTAGCATCGACAAGATCAAGG AGAGAACGCGCGCGACCATATGCATCGGGGAGGGGGTAGGAGAGAAGGAG GTTATCATCTGCGGGGACCCCTCCGCTGTCGCCGCGGCCAAGCGCGAGGT GGAGGCAATGGCTCGCGGGCCGTCGAAGAGCAGCCCTGCGGCCCAGGCCT CCAAGGACAGGCAGAGCCAAGACGGCAGCGTTCCTGACGCGGCCGGGGAC CCTTCGCCGCTCCTGCCGCCTTCCCGAGGCGAGGGGGTGCCGCACACGGG AACCCCGTCGCCCCTGCCCCCATCGCCGCAGACCCAGAACCAGAACCAGC TGCACGCCGGCAACGCTGCGGGCGGCGGGGGTCAGGATGTTGATCTGGCG GACCGACGGGGGGGTGAGGCGACGCCGGGTTCGGTGAAGACGGCGGGTGC GGTCCCGAAGCTGGACGGCGAGGGTTTCCGCCGCGGCGTAGAAGACCAAG AACGGGTCGCCGAAGAGCAGCAGCCCCCAGTCGTGACCCCGCCGGGCGGC AGAGGCGACGCGCGACAGGCGCCGGGGCCGAGCGCCTCGGGATCGACCAG GCGCCCGCTTGGCGATCGTGATGCCTCCTCCAGCGGGGGCGGCAGCAACA ACAGCAGCAGCAGCAACAGCAGCAGCAGTACCGGCAGCGGGAGCTTCGGA ACGAAAGAGAGGGATGTTCCCCGGGGCGGCGGGGGTTCTACCGGGGTTGC GGCAGAGCCGGCGGGGTCACCACCACCCGCCGTCGTGAGCGGCAGCCATC ACCCGGCCAAGGGTTCTTCGGCGTCGTCATATCGAGGGAGCCTCGGCGAG CGTGACACGCGGGTGTCGGCGGCGACGGAGTCGGAGGCGGAGCGCCTCCT TGCCAGCCTTCTCCTCGTGGACAACGTGGCGGCGGACGTGGGGCCGTTGT CGGGCCGGTCGCACTTCTCGCGCCGCCGTCGCGAAGGGGCGGAGGCGACG ACGGGCGTGGGTGCCGGCCTGCGACAGCCGCCGCCGCCGCCGCCGTTTTC TGGTTCTGGCGATACCGGCGGACACAGAGCGACACCCGCTGCTACTGCCG CCGCCGGCGGTCTCGTGGTTGGATCCGCTACTCCGGCCTGCAACGGCTCA CCGTCGCCGTCGCTGCTGCCGGTCGGAGGTGGCGTGGCCCCGGCTTGCGG AGGCGGGTACTTCACGTCGAGCAGCGGGATTCGGGTTCGCCTCTGA back to top
|