mRNA_Ecto-sp6_S_contig9.18214.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig9.18214.1 vs. uniprot
Match: A0A6H5JB06_9PHAE (PDZ domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JB06_9PHAE) HSP 1 Score: 654 bits (1687), Expect = 1.910e-231 Identity = 375/404 (92.82%), Postives = 381/404 (94.31%), Query Frame = 1
Query: 16 CPGMPRAAVAAAAATALAMLATSTLPAEAFFTPPAVPPSSWKQQHDTSARTMMTSFQSPTNAGVATSFCRSPAATDASERGGARLRVERRQQRRFSSSLGRPLRSSPSDGGSDDPSSQGMPESEKLREKLETIASASGEGGGEDGLTQKEQEELDEMEEDRRVEAEVDRLEAAEKAKSMDAFRMSLDEDDDXXXXXXXEVYEEIIANMTKPLGITIEESTDKAELVYLTSVGDKAEAAGLQVGDVLTGVSAVFGDEVWSVKDKNIEEIRSLVRCRPEPFSLIRVERGHVSLEERCAPGFDEEDLSNCWQLPEDMIPGDGEECELNPDFQNLWAAVYEEEMDVLTGESAARAAGVGRGGVFGXXXXXXXXXXXXXXXXXKEKPGPGSFNGETFTGDSWDTSGPSF 1227
CPGMPRA LAMLATSTLPAEAFFTPPAVPPSSWKQQ DT ARTMM SFQSPTNAGVA SF R+PAA DASERGGARLRVER QQRRFSSSLGRPLRSSPSDGGSDDPSSQGM ESEKLREKLETIASASGEGGGEDGLTQKEQEELDEMEEDRRVEAEVDRLEAAEKAKSMDAFRMSLDEDDDXXX EVYEEIIANMTKPLGITIEESTDKA+LVY+TSVGDKAEAAGLQVGDVLTGVSAVFGDEVWSV DKNIEEIRSLVRCRPEP+SLIRVERGHVSLEERCAPGFDEEDLSNCWQLP+DMIPGDGEECELNPD+QNLWAAVYEEEMDVLTGESAARAAGVGRGGVFGXXXXXXXXXXXXXXXX KEKPGPGSFNGETFTGDSWDTSGPSF
Sbjct: 18 CPGMPRAXXXXXXXXXLAMLATSTLPAEAFFTPPAVPPSSWKQQQDTVARTMMASFQSPTNAGVANSFSRNPAAIDASERGGARLRVERGQQRRFSSSLGRPLRSSPSDGGSDDPSSQGMSESEKLREKLETIASASGEGGGEDGLTQKEQEELDEMEEDRRVEAEVDRLEAAEKAKSMDAFRMSLDEDDDXXXNAEDEVYEEIIANMTKPLGITIEESTDKAKLVYITSVGDKAEAAGLQVGDVLTGVSAVFGDEVWSVNDKNIEEIRSLVRCRPEPYSLIRVERGHVSLEERCAPGFDEEDLSNCWQLPDDMIPGDGEECELNPDYQNLWAAVYEEEMDVLTGESAARAAGVGRGGVFGXXXXXXXXXXXXXXXXPKEKPGPGSFNGETFTGDSWDTSGPSF 421
BLAST of mRNA_Ecto-sp6_S_contig9.18214.1 vs. uniprot
Match: W7U9U3_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U9U3_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 3.960e-12 Identity = 34/88 (38.64%), Postives = 59/88 (67.05%), Query Frame = 1
Query: 616 YEEIIANMTKPLGITIEESTDKAELVYLTSVGDKAEAAGLQVGDVLTGVSAVFGDE-VWSVKDKNIEEIRSLVRCRPEPFSLIRVERG 876
+EE + N++KPLG+ +EE+ D + +VY+ +KA+AAG++VGDV+ G S +F D + +V K +E + SL+R R + +R+ +G
Sbjct: 98 FEEYVVNVSKPLGVAVEEAGDGSGMVYVVEANEKAQAAGVEVGDVIVGCSFIFDDSYLVNVTGKGVERVESLIRSRGPDYVCLRLRKG 185
BLAST of mRNA_Ecto-sp6_S_contig9.18214.1 vs. uniprot
Match: A0A7S1XUN2_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XUN2_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 3.320e-11 Identity = 48/155 (30.97%), Postives = 77/155 (49.68%), Query Frame = 1
Query: 610 EVYEEIIANMTKPLGITIEES-TDKAELVYLTSVGDKAEAAGLQVGDVLTGVSAVFGDEVWSVKDKNIEEIRSLVRCRPEPFSLI-RVERGHVSLEERCAPGFDEEDLSNCWQLPEDMIPGDGEECELNPDFQNLWAAVYEEEMDVLTGESAARA 1068
E E + + +PLGI ES + V +T G+KA AGL+VGD++TGVS +FGD++W +++ + ++R L+ R + ++ RVERGHV E + E L L D E ++ D A +E++ + G A
Sbjct: 39 EAEEVLKVEIMRPLGIRAFESLAARVPTVVVTKAGEKAIEAGLEVGDIITGVSGIFGDDIWDIREGGLAKVRELIEFRGKDLPVVLRVERGHVLSEIALEDARETEALEESGDL---FTVLDSEMRDMLQDVDGTMMAYIKEQISEINGNEETAA 190
BLAST of mRNA_Ecto-sp6_S_contig9.18214.1 vs. uniprot
Match: A0A8J2S884_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S884_9STRA) HSP 1 Score: 64.7 bits (156), Expect = 3.090e-8 Identity = 37/103 (35.92%), Postives = 56/103 (54.37%), Query Frame = 1
Query: 619 EEIIANMTKPLGITIEESTDKAELVYLTSVGDKAEAAGLQVGDVLTGVSAVFGDEVWSVKDKNIEEIRSLVRCRPEPFSLIRVERGHVSLEERCAPGFDEEDL 927
+E+ +T+PLG+T++E + LV G A AAG+ GD + GVSAVFG VW + ++ + L+R R +L R+ RG + G DEED+
Sbjct: 56 DELEVELTRPLGVTVQEGANGRVLVQGCRAGGCAAAAGVAPGDEIIGVSAVFGAGVWRCEGAGLDRVEGLIRAREGSVTL-RLRRG-AGEPAAASDGLDEEDV 156
BLAST of mRNA_Ecto-sp6_S_contig9.18214.1 vs. uniprot
Match: A0A7R9UEL0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UEL0_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 4.400e-7 Identity = 32/83 (38.55%), Postives = 51/83 (61.45%), Query Frame = 1
Query: 637 MTKPLGITIEESTDKAE-LVYLTSVGDKAEAAGLQVGDVLTGVSAVFGDEVWSVKDKNIEEIRSLVRCRPEPFSL-IRVERGH 879
+ +PLGI + ES V +T VG+KA+ G+ GDV+ GVS VFG+++W+ K K + ++ L+ R + +R+ERGH
Sbjct: 64 LLRPLGIRVFESQVAFHRTVVITHVGEKAQEEGVLRGDVIVGVSGVFGEDIWNTKGKGLARVQELITYRGAGLPVRLRLERGH 146
BLAST of mRNA_Ecto-sp6_S_contig9.18214.1 vs. uniprot
Match: B7G6L8_PHATC (Predicted protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G6L8_PHATC) HSP 1 Score: 62.8 bits (151), Expect = 8.260e-7 Identity = 37/87 (42.53%), Postives = 52/87 (59.77%), Query Frame = 1
Query: 643 KPLGITIEESTDKAELVYLTSV--GDKAEAAGLQVGDVLTGVSAVFGDEVWSVKDKNIEEIRSLVRCRPEPFSL-IRVERGHVSLEE 894
+PLG T+EES V+++ V A AG+ VGDVL GV+AV GD++ V IE I+ LV RPE SL +++ RG +E+
Sbjct: 195 RPLGCTVEESLGVGRHVFVSKVVPDGNAAKAGIAVGDVLIGVTAVTGDQIMDVSGLGIETIKGLVASRPENESLSLKLARGTTVVED 281
BLAST of mRNA_Ecto-sp6_S_contig9.18214.1 vs. uniprot
Match: A0A7J7IMV9_9RHOD (PDZ domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IMV9_9RHOD) HSP 1 Score: 58.5 bits (140), Expect = 6.330e-6 Identity = 34/101 (33.66%), Postives = 58/101 (57.43%), Query Frame = 1
Query: 622 EIIANMTKPLGITIEESTDKAELVYLTSV---GDKAEAAGLQVGDVLTGVSAVFGDEVWSVKDKNIEEIRSLVRCRPEPFSLIRVERGHVSLEERCAPGFD 915
++ A + KPLG+T+ E D +VY+ +V G+ AE + G V+T VSA FGDEVWSV+ ++ + ++ R + I VE ++E++ A ++
Sbjct: 69 DVYAVVRKPLGLTLAERDDG--MVYIAAVDPAGNAAETGVFRPGQVVTAVSATFGDEVWSVRGVGLDRVLKSIKVRSGDYVTIVVE-DERTIEQKKADAYE 166
BLAST of mRNA_Ecto-sp6_S_contig9.18214.1 vs. uniprot
Match: J7G1Q2_9CRYP (PDZ domain-containing protein n=1 Tax=Chroomonas mesostigmatica CCMP1168 TaxID=1195612 RepID=J7G1Q2_9CRYP) HSP 1 Score: 57.8 bits (138), Expect = 7.240e-6 Identity = 30/88 (34.09%), Postives = 50/88 (56.82%), Query Frame = 1
Query: 619 EEIIANMTKPLGITIEESTDKAELVYLTSVGDKAEAA----GLQVGDVLTGVSAVFGDEVWSVKDKNIEEIRSLVRCRPEPFSLIRVE 870
E+ A + KPLGI +EE D +V++ + K AA +++GD++ GVSA FGDEVWS + ++ + ++ R F + +E
Sbjct: 62 EDRYAIVQKPLGIILEEGDDG--MVFIAKIDPKGNAARSNFDIRIGDIVVGVSATFGDEVWSTRGVGLDRVLKSIKIRSGDFVTLILE 147
BLAST of mRNA_Ecto-sp6_S_contig9.18214.1 vs. uniprot
Match: M1V594_CYAM1 (PDZ domain-containing protein n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1V594_CYAM1) HSP 1 Score: 58.2 bits (139), Expect = 9.140e-6 Identity = 31/86 (36.05%), Postives = 51/86 (59.30%), Query Frame = 1
Query: 622 EIIANMTKPLGITIEESTDKAELVYLTSV---GDKAEAAGLQVGDVLTGVSAVFGDEVWSVKDKNIEEIRSLVRCRPEPFSLIRVE 870
+I A + KPLG+T+ E D +VY+ +V G+ A+ L+ G ++T VSA FGDE+WSV+ ++ + ++ R F + VE
Sbjct: 69 DIYAVVQKPLGLTLAERDDG--MVYIAAVQPGGNAAKTGVLRPGQIVTAVSATFGDEIWSVRGVGLDRVLKSIKVRSGDFVTLVVE 152
BLAST of mRNA_Ecto-sp6_S_contig9.18214.1 vs. uniprot
Match: A0A1Z5JQE1_FISSO (PDZ domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JQE1_FISSO) HSP 1 Score: 58.5 bits (140), Expect = 1.110e-5 Identity = 41/100 (41.00%), Postives = 57/100 (57.00%), Query Frame = 1
Query: 622 EIIANMTKPLGITIEESTDKA------------ELVYLTSV--GDKAEAAGLQVGDVLTGVSAVFGDEVWSVKDKNIEEIRSLVRCRPEPFSL-IRVERG 876
E++ + KPLG T+EES A + V+L++V G AE AGL VGDV+ GV+ +FG E+ +V I+++R LV R E L IRV RG
Sbjct: 64 EVVLSEHKPLGCTVEESLASAVIEVGDNTQMKLDYVFLSAVKPGGNAEMAGLLVGDVVVGVTGIFG-ELENVAGLGIDKVRGLVAARSEDQPLTIRVARG 162 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18214.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig9.18214.1 >prot_Ecto-sp6_S_contig9.18214.1 ID=prot_Ecto-sp6_S_contig9.18214.1|Name=mRNA_Ecto-sp6_S_contig9.18214.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=402bp MPRAAVAAAAATALAMLATSTLPAEAFFTPPAVPPSSWKQQHDTSARTMMback to top mRNA from alignment at Ecto-sp6_S_contig9:1929381..1933308+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig9.18214.1 ID=mRNA_Ecto-sp6_S_contig9.18214.1|Name=mRNA_Ecto-sp6_S_contig9.18214.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=3928bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:1929381..1933308+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig9:1929381..1933308+ >mRNA_Ecto-sp6_S_contig9.18214.1 ID=mRNA_Ecto-sp6_S_contig9.18214.1|Name=mRNA_Ecto-sp6_S_contig9.18214.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1206bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:1929381..1933308+ (Ectocarpus species6 EcLAC_371)back to top |