mRNA_Ecto-sp6_S_contig9.18206.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig9.18206.1
Unique NamemRNA_Ecto-sp6_S_contig9.18206.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
BLAST of mRNA_Ecto-sp6_S_contig9.18206.1 vs. uniprot
Match: A0A6H5K0Z0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0Z0_9PHAE)

HSP 1 Score: 141 bits (355), Expect = 5.200e-37
Identity = 67/76 (88.16%), Postives = 68/76 (89.47%), Query Frame = 2
Query:  866 TMTCSPHGRPCCVTPSAVRP*GRVVVCDGLRQLCVTCFFAVQEKTEPVFLCFSSRLGCARRKWRSRPFVCFVDFGI 1093
            TMT SP GRPCCVTPSAVRP GRVVV DGLRQL VTCFFAVQEK EPVFLCFSSRLGCAR KWRSRPFVCFV FG+
Sbjct:   84 TMTYSPDGRPCCVTPSAVRPWGRVVVFDGLRQLRVTCFFAVQEKPEPVFLCFSSRLGCARSKWRSRPFVCFVYFGV 159          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18206.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K0Z0_9PHAE5.200e-3788.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig9contigEcto-sp6_S_contig9:1859850..1868598 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size1193
Hectar predicted targeting categoryother localisation
Exons10
Cds size654
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig9.18206.1prot_Ecto-sp6_S_contig9.18206.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig9 1860237..1868248 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350514.3247159-UTR-Ecto-sp6_S_contig9:1859849..18602361682350514.3247159-UTR-Ecto-sp6_S_contig9:1859849..1860236Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig9 1859850..1860236 -
1682350514.4217775-UTR-Ecto-sp6_S_contig9:1868248..18683401682350514.4217775-UTR-Ecto-sp6_S_contig9:1868248..1868340Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig9 1868249..1868340 -
1682350514.431783-UTR-Ecto-sp6_S_contig9:1868538..18685981682350514.431783-UTR-Ecto-sp6_S_contig9:1868538..1868598Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig9 1868539..1868598 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350514.3379464-CDS-Ecto-sp6_S_contig9:1860236..18603241682350514.3379464-CDS-Ecto-sp6_S_contig9:1860236..1860324Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 1860237..1860324 -
1682350514.3469496-CDS-Ecto-sp6_S_contig9:1861602..18616341682350514.3469496-CDS-Ecto-sp6_S_contig9:1861602..1861634Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 1861603..1861634 -
1682350514.3556645-CDS-Ecto-sp6_S_contig9:1862333..18624301682350514.3556645-CDS-Ecto-sp6_S_contig9:1862333..1862430Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 1862334..1862430 -
1682350514.364691-CDS-Ecto-sp6_S_contig9:1862690..18627731682350514.364691-CDS-Ecto-sp6_S_contig9:1862690..1862773Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 1862691..1862773 -
1682350514.3738787-CDS-Ecto-sp6_S_contig9:1863947..18640021682350514.3738787-CDS-Ecto-sp6_S_contig9:1863947..1864002Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 1863948..1864002 -
1682350514.3834043-CDS-Ecto-sp6_S_contig9:1865693..18657951682350514.3834043-CDS-Ecto-sp6_S_contig9:1865693..1865795Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 1865694..1865795 -
1682350514.3928325-CDS-Ecto-sp6_S_contig9:1866866..18669441682350514.3928325-CDS-Ecto-sp6_S_contig9:1866866..1866944Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 1866867..1866944 -
1682350514.4028258-CDS-Ecto-sp6_S_contig9:1867646..18677241682350514.4028258-CDS-Ecto-sp6_S_contig9:1867646..1867724Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 1867647..1867724 -
1682350514.4125988-CDS-Ecto-sp6_S_contig9:1868207..18682481682350514.4125988-CDS-Ecto-sp6_S_contig9:1868207..1868248Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 1868208..1868248 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig9.18206.1

>prot_Ecto-sp6_S_contig9.18206.1 ID=prot_Ecto-sp6_S_contig9.18206.1|Name=mRNA_Ecto-sp6_S_contig9.18206.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=218bp
MLHGTPCPSGHCSRSAAGRPPPTFSKGSLANSHAARSMAMAQRWQARWGP
RGGQYSGAWSASPAHMNLRRVPATTSSTWWYGSQEQSTCWGQSGPICSDR
HCWNSPSSIAGGEPNRREDSLKNTTAEYPMGCPENLIIALHQRHARLGTH
TNPVARAREMERLRRPSPRQRVRAIGRQSEHGRVHRDKRSSGRVIVRSGL
CYPRTLCYFWECCRLHA*
back to top

mRNA from alignment at Ecto-sp6_S_contig9:1859850..1868598-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig9.18206.1 ID=mRNA_Ecto-sp6_S_contig9.18206.1|Name=mRNA_Ecto-sp6_S_contig9.18206.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=8749bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:1859850..1868598- (Ectocarpus species6 EcLAC_371)
AGGCCGTGGCGGTGGAGGCCGTGGTGGCGGGGGCGGCCGCGGGGGCCACC GTATCAGGACGTGCGTACAACTTTTTTAGGCGATGTCTCATTTCGTGACC AACGACAGCACACATGATCAAAATTACAGCAGTGAAGCAGTGTGCTCGTA GTCATTCTCACACTTGTCGTCTCCCCGTGATGCCCCTCGTTAAGTATTTC TCGTTCGCGTGGATGCCACTTGAATTTATGCATGGTTATCCGGAACGTGC CGGAACAGAGACGCTCTGTCGGCGGTGCTGTCGATGCGCCACGCCATCCC GGCGTTCCGAGGGGCACTTCGTGAGCTTCTGGGCGGAAACGCTAACGCTG ATGCTGCACGGGACGCCGTGCCCCTCGGGGCATTGCTCGAGGTGAGCCCG GCAGTCCGTGGAATTCGTAGGGTACACGCAAACAGGTTGAACCAGTTCGC TTGGTGCCCACCCTCGACTTGGAAGCATGCCTGTCTTCGGGGGTGGGGTT GGGTTGCAGAAAATGAGAGCTGAACCATGTTTCAATGAAAGAAGCAAAGA CGTTCAAGTGCCGGCCGATGCCCTTAGCGTGGCCACATGACCAGAGGAAT ATAATTTGGGAGGGAGGACCACAGGTGGGACAGGTTGAATTTTTGGCCTC GACGGGGCTAGTGTTGAGTTAGTCCTCCCGTTGACCAATTCGCACTACTG TAGCGTGTGATCATCCGAACAACAGCAGTTTGTACATGATCGAGAGCGTT TCCTCGCTACTTCTGGTATTTCAAGTGATTCTTCGTTGTCCTTTTCCACC GCTGACTGCTGCGTGTATTGTCCCTCGACTTAACCGCAATCACAATGCCA AACGCAACCACCGCCACAACGCAGGTCGGCAGCGGGTCGTCCGCCGCCGA CGTTCTCGAAAGGCTCTTTGGCGAACTCACACGCCGCACGAAGTATGGCA ATGTGAGTGTGAATGGTCTGTCTGCTTCCACGCATGGCGAGGCGCGAGAC ATGTTGTTAGCTTCGGCGCTTGGGAACTGTTGATGTTGCTAAGATACGAG GTTCCTTGTAGAAGACACGGAACCAACCGGGATGGTTCTGCGATATTTGC TGTGCCGTTGGGTTTCTAAGAGCGTGTTGACGTATCCGCGAGCGGGAGTG TGAGTGTTCCTCGATATGTGTCTTGGATACGGTTGACTCAGTCTCAGCAT CGAGGTTTTTATGAAGAAGTGCAGCATTCAAAACAAGATGATCAAGTCTC GAATGGGTAGTCGTCCAGATGTCGCAGCACCCCGACATCGCAGGAGGGGA GTACTCGCCTAGCCTTTCGTTTTGGGGGAGACCCCCGGCCGGGGATATGC ATGTACCATGCGTTTTCGGGCGAGTCTCTCTTTCTGAGCAGTCGGCAACA AGCAAGCAGTGCCGTAGGTACCCCCCGCGAGTCCGTACGGTACGGGCGTC ATTGCGTCTTTAGCTGGTTTTCCGCACCACCGCTATCTTCTTGATTTCTT CTCGACCTTCTCCCACCGATCTTGGCAGCTTCCCGAGCAGGACCGGCGGC GAGGCATTACGTGCCGCAGTCGACTGCCACGGCCCTACGCCATCGACAGC TAAGCACCCTCCCACACACACCCTCTCCGCGCAAATCGCCCCTCTCGTTG GCAGGGCCCAGCGATGGCAGGCGCGCTGGGGGCCACGAGGTGGACAGTAC AGCGGAGCTTGGTCTGCCAGTCCTGCACACATGTGAGTCAAGGGTGCCCG AATCTGAGGGTTCGTGTTGAATACAGGTACCAGCAGTATTTACCAAGTTG AAGTCGTGTAGACGACCACGGGCGGGTGAAAGCTTGTTCCGTTTCAGTGA GCCAATCAAGCGTCGTGGTGAACTTGATTGGCACTTGCCGCAGTGGCTGA GGAAGAGCCACCGTCTGTGTGCATCCCTTTCGTATAACGCCAAACCATTG AGAGAATTCTAGGTTTATTTCAAAACATTCTAGGGTGGGTTACAAAACAT TTACGTCTTTTGCGAGGTTCTTGTGTTCGCGCAAGTTACGTGTGTGTTTC AGCTTGCTTTGAATCTGAAAACCAAAATCACACATGTTTTGAAGTTTCTG AAAGGTCATTCACACGTGCGGATGATCTCTGGCCTATTGCCATGATACAA GCGGTGACTCTCGCTCATTAGAAGAAACACATTGTGCAAATGGCACGAAT GCAGTCTTGCAAGGCGTTTTTCTGCTGAAGGTGAAACGGTTGTGATTTAC TCGTAGGTTTTCGACCATTTCTGGGCGCAGTCATGCGGATGGTGTCACAT GCACTCTTGCCCAGCACAGGTCTGTCAGCAGCTACCATTGCGCATGCGCC GAAATCGAGAGCACATCACGAAATCAAGAAGTTTCGTCGTGTAGTGATGC CTGCTGCGGCGGTGTTTTCTGACGGTGCGCGCATGCAATACGTTGCGCAA AAGCCGGGCGATGCGGGCTATTAATTGTTGGTTTTCCGAGAAGGGTACTG CTCCTTGAACAGAAAGAAGGCTCTGGAACCGCCTCCCCGCTCCCCTCCTC CACGCCGCCACCGTGCCCATGCCCGTTCCGTGACATTTCGAAGTATTCAA GTGCCCCAGAAGACCGTGTTCAGATGCCGAAAACCGCTCCAGGGCTAAAC CAATACCCCACTCTCCGGGGTCGCCCTCTGTAGTACATGTCCAAAAATCC ACGATCGCATCAGCCTTGGCACCGGGATTTGGTGTTAACTAAGCGCTGTA CCAGATCACCTGCGATTCAGCAAATCAATGAACGTGCTTCTTGTTTTTCT CAGGAATCTACGACGAGTTCCAGCCACAACCTCGTCCACGTGGTGGTACG GGAGCCAGGAACAGTCAACGTGTTGGGGGCAGAGTGGGCCCATCTGCTCC GACAGGTGCAGTGTTGTTTTTGCATGGTCCGGTAGCGTCGTGTGATTTTT TTGCCGTGGGGAAAAGCTAGCTCATCCGTTTAGCCAACACATGATCGAAA AGTAGTTTTTTTTGTTGACCACCGTCGTGTTAAGAGCGGTGACCCTTGTT CAGAATAAACGAATTTCACGAATGGAGAGCCGCGTTTCTGGTGACGAAAC GGTTGCGATTTCCTCTTGTTTGTTCGGGCTTTTCTTGGCACAATCCCAGC CCACTCTCTCGCCCAGCACAGTTTGTAAGCGGCCATCATTGCGCATGCGC CGAAGTCGGGCGCATCTCACGAAGTGAAGAGGCTTCGTCGGATCGCACAA CGTGAACTGATACCTGTCAAGCTGCGGTGGTGTTCTCTGACGGTGCACGC ATGCACTATATCGCGAAAACGCCGCGCGATACGGGCTAGTTGTTGCACCG AGAGGAGGAGTAACACCGCTCCGTGAACAGAAGGCTCTGGAACACCGCCC CGCTCCCCTCCTTGACTCCGCCACCGTGCCCATGCCCGTTCCGCGGAAAT TCGAACTACAAACGTGTCCAAGACGGCCGTGTTCGTTTTCTGAACCTGTT TGACGTGCCAGCCGCGTCACACCGGAGGAATGCCACACAGAACAGGAGAT TTTCTATTCCCCAACATTTCCGGGTCTAAACCAACACCCAACTCTCCGCA GAGCGGGATTCCTCTCTACTGGCCAAAAATCTGCAATCACATCAGCCTCG GCACCGGGATCTAGTGCTGATTGCGCGCTTGGTCAGACCACCTGCGATTC AGCAAATCAATGAATTGCTTTACGTTTTTTCAGGAAATCAAGAAGCGTTT CAGCCTCAACTTCGTGCACGTGGCGGCACGGGATCCTTTTCCCGGGCCAA GTGCAAGAGGAGGAACAGCCAATGTATTGGAGCACAAATGGACCGACATG TTCCAACAGGTGTCTTCAACACTGCACCTGTCGGAGCATATTCGTCCACT CGTCCCCGAACACGTTGACTGTTCCTCCTCTTCCACTTGGCCCGGGAAAA GGATTCCGTACCGCCACGTGCACGAGGATGTGGTTGGAGCGCTTCGCTCG TTGATTTGCTAAATCGCAGGTGATACGACAAAGCGCTTAGTTAACATCAA ACCCCGGTGCCGAGGCTAATGCGATCGTGGATTATTGGCCATGTACTTCA GAGGAGGACCGCTCCGCAGAGAGTTGGGTGTTGGCTTAGCCCTGGAGCGG GTTTCGGAATCTGAACACGGTCGTCTGGGGCATGTTTGTAATTATAAATT CCACGAAAAGGGCATGGGAGCAGTTTTTCCGCGAAGCTGTTTCGATCATT ATAGCAAGGTCCGGTTCCGTGGCGTGAGGTTTTCGCCGTGGGGATCTCCA AGCTTGTGCATGCGAGGGAACCTCTTGATCTCTCCATACCCCCTCTGCAC ACTCCCTCTGTCCCAGCTGCACCACTCTGTGCAAACGCCAAGTAGCCTGG GGCATACGTCCTACGTTGTGTAGCCCCCCCGAGATTGTTCAACCGGGCTG TAAAGCAGAGGGTATCGTTACCTCCCTGTGCAGCCACCTGCCCTCTTCGT AGGCACGCCTTCGCAAGTAACCGTGGTTTGGGTGAGACATTGTTGACCAA ACCCCCGCCCTTCCCTGCTTTCCCCCCCGTTGGTGCACAAACACAGGCAC TGTTGGAACAGCCCTTCGAGTATTGCTGGAGGTGAACCGAACCGCCGAGA GGTGAGCTTTTCCCGTTGTGAACACGCCTCTGTCTTGAGCTTTGCATCAT GCGGTCAGGCGTACGTGTATTTGAGGAGTGGGCATCACCTGTTCCGCGCA GCGCATGAGATGTCGACATGAAATCGGTGTGGGAAAAATGTGCCTTCATT GAAACGGAGCAAACTCAAGAATGCACGTTTTCTGCGTTTGTTTACAGAAA TAGCCCGCCGCGTGATGCGAGCAGGGGCGACTCTTTGTAGATCCTAGCTG ACCGCGAAACCGCTCGACTCCTCGAGAAGGTACAGCAGCATGACTTTAGG CCGCAGCAGGCTGTTGTCGCGGCCACCATCTCGTGCCGGGACAACATCGG GCCTCTTTCTCGCTGTGGAGGCGTTGTTAGCGGCAGCATTGGTTCTTCAT GGGGTGGACGATAACCTTCGCCGAGTATACACATAATGAGTCAACTCGAC GGTAGCCGGTGTAGGCTTGCCGTGTACCATGAATATTATATTTTCATTCG TCCTTGAGGCCGATATCTCTCTCCGCAATATGAACACTCCGCCGCCGGCG ACGTGCTTACACCCTCTTATCTTCCAGCGGAAGGGGAAAAGCATGTTATG CGTGAGGTGCCGCTCCCCACCCCAATCTTGCGGGTTGCTCTCCCACGCCC GGTTTTGTCAAGTATTGTGGAAACCCGCAAGGCTGACACCATATATCTAC GTGTGACAACGCCTTCTGTGGGGAACTCGTGTTGGTCTCGTGCCGCGCCG CTTATCGCGTAGCGTCCGAAGAGCGTCGGTGCTCTCGACCTGCAATCACC AGCCTCAATTGCCGTTTGCGGTCATTTCCGACACTTGGCAGTGACAGACC CTAAGCACGATTTGACACCACGGAAGATATCACACTTCCTGGAAGAACGC TACTGAGATACGTCGCGCTGTGATTGGTGTTTTGGGGGTTACCTATGTCC GCTGCCTGGACCTACTTGCCTCTAGTTACCGCGATATTGGGGATGTTTAG GAAGCTTCCCTGTACTATGTGCTCGGCACCCACTCGTTCTATTCAGTTCG TAGTTACGCATCTCGTCGTCGAGATTGTACACTATTGTACAGACTAGACA TGATCCTGACGAATCTCTCCCCCGTGCTCTTGCTGGGACTATGTTTTCGG AACCCTGATGTATTTCTGTCGTCAGGACTCTCTCAAGAACACGACGGCGG AGTACCCAATGGGCTGCCCTGAGAACCTCATCATCGCTTTACACCAGAGG CATGCCAGGTGTGTGTGTTTGTGCGTGTATGTGTGTGTCCCAAGCGTGGG GGCGGGTTTGGTTCCTTGCCATCGATGGTAGTCGTCGCACCTGAGGAAAG CTGCGGAGCGATGCTTCAAAAAGCATGTGAACCATGGTGGCCCCGCCCAC TAAACAAGCCGAAAGAGAGGGTATCAGTCGTTACAGAAAGGTGTGACAAC TTGCTCGAGATGCTATGAAGACCCCGAAAGCGATGACAGCGTTTCGGGTC CTTGACTATTTTCATCAGGCTCGGGACACACACAAACCCTGTGGCTCGCG CTAGAGAGATGGAGAGATTGCGCCGCCCGAGCCCCCGACAACGGGTGCGT GCTATAGGGCGACAGGTGGGTGCTTGGATCCCTTGATTAGTCCAACGTGG GTGAAGGAATCCAAGGTCTGCGCTGCGTTTGACACGTGTCCCTTGAGCAC GTAGGCGTTATCGCTAGTTCCGGCGGCGTACAGTACTTCTCCTTGCGTGC ATCCTCGAAGACAGGCACCAAAACGATAATTATTTGTGTCCCGATCTTGG CAGACCAAATGATGGAACGGGACCGCTGTCATCGTTCTACGGCCTATTCA TAGAATCTCGAGCAAATCTATCTACAAGAAAGGGGTGCGCTCGTTGTCTA TGGAACGTTTATTGCGGAGAAATTGATCGTGTTTCGGCGAAACCTTTGTG TGTTCCCACCCCAGAGAAAGCCGGGTGGGAAAAGTACAAGCCTGTGCGGC CTGTTTCGCTCTTTCGGACCACTAGTCACGCCTCGTGGTCAAGACCAAAA GCATCGTTCCTGTTCAGCCCGACTCGTTTCTGAGGAGTGTTGTCCGACGT GCCGCGTTGGCGACGAGCCGCCCTCATCCCGAAGTAAAAGTTGTGTAAAA TGCGACGATATTATTTCTTGCATGCCGTGGATGAATCCCCTCGGCGGCGT AGCTTGGAAAGGTTGAGGCCTTTTCATTGGAGAGTGTCGTGACGGGGAAA TTAACTCCCGTTTTTCCCTGCCTATGTTGCCTCTCGCCCGCAACACGTCA ACGATCCCGTCCAGTCTGAACATGGCCGTGTTCATAGAGACAAGCGGTGA GTCCAAACGTACTGAATAGTATTGATAGGATTTCGCCGTACATACTAGTA AGTACAAACAGGTCAACAGGATATTCGATATCTTCCCATGACTGTACCGC GGGTTTCTTGGATTTGTACCTGAGGGAAGGAACTATCGACCGTCCTCGCG TTTTCGGTGAAGGCAAGTGCCGCAGAGGAATCCTCTCGTTGAATTATGGA TGGGGGCTCCTCAGTACAGGACGCGAACCCGCAGGGTACGCGGGCATTCC GAGCGATAACGACAAAATTGTTGCTGAGAACGAAGCCACGCAAGAAAATC AAGCAATAATGAACACAAGCAGTGCTGCACGAAGCGATAATCAACACCTC TGCACTTTGCTCTACCCCTAGTAACAATCGACACCACGCCAAAAAGCGTA GCAGCAAGCGAACGTTCTTGTTCTTTTTAGACACTGCTGTAATCGAGGAA AGGGCCAGTTGGTCGACTTCCGGTCTGCGAAGGAGAAGGATGTGCGTCTT GAAGAGAAGAACGTGGTGCTTTCTCGTCACAATGGAGGGCAATCACAAGC AATTCGTCACAATGGAGGGTAGTTCGCAAAGCACAAGGAATATACTGGTT GATGCCCTTGCCGAGTGAATCATAGTCTATGTCTTCTTGGCGATCATCAT ACATTTGGTTGCCGTGCAGCCTATCCCGGTGCTACATAATTCGATAACAA AGGCTTGCTTTCCCTAGGCTGAATGTAATACAACTGCGTGCCCTTCCTTT AGGGCGACGTGTACCAGTCGACTATAGAGGGAACCGTCTTGTCTCATGTG CACCAGAAGTTTTGATTGCGACTCCGAGGTGGCCAACAGTGGTGGCGGCG CGCTTTTGTGGTCGGTTGTGGCAAAAGACACAACGAGAACATCCAATGGT GTCCAAATGGCAAGAGTATTCGAAGTACTTGTAGCTGGACTGAGCAAAGT TGTGTGTTTCTAAATAAATGTTTGTCCGCGTAGAGGATAGGAGAACATAA CATAACCTCCCCCGAAATCGAAGAAAATAAAGGTGGAGCACAACCGACCT TCGTTGAACTTTAGAAGCGGCGAACAGAGGTATACCCGTGATAATCTCGC GAAGAAAGGATTTTATGTCGTGATGGTGTTGATTTTGTTCTCAACGGGAC GCATGATCAACAGAAAACGACGATTTCATTGACAACGCAAAGCAAAGCAA AGCAAAGCAAAGCAAAGACCCAGGCCTTATCCCGCCCCCAATTTCACTCG TCCGTTTGCGCCTACTTTGTGCAGATCCTCCGGTCGTGTTATTGTACGAT CTGGTCTGTGTTACCCACGGACGCTTTGCTACTTCTGGGAATGCTGTCGC CTACACGCATAGACCAGGCGGGACGTGAACTGGCTACTACAACAACGGCA GGGTCGGCGAAAACCTGTCTGACTATGACGTGCTCACCGCACGGGCGGCC GTGCTGCGTTACGCCAAGCGCGGTTAGACCTTAGGGTCGCGTCGTCGTCT GCGATGGACTGCGACAATTGTGTGTCACCTGTTTCTTTGCGGTGCAGGAA AAAACGGAACCCGTGTTTTTGTGTTTTTCGAGCAGGCTGGGTTGCGCTCG AAGAAAGTGGCGGTCTCGTCCTTTCGTGTGCTTCGTGGATTTCGGTATAT GAATCAAAACCGCTGCTGGCAATGCGGCACAACCGTGCGGCTAGCACACT CGGCTTGTGACACTCCCAACGTCATGACGTGTTTCTACTCTGCACGGTG
back to top

Coding sequence (CDS) from alignment at Ecto-sp6_S_contig9:1859850..1868598-

>mRNA_Ecto-sp6_S_contig9.18206.1 ID=mRNA_Ecto-sp6_S_contig9.18206.1|Name=mRNA_Ecto-sp6_S_contig9.18206.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=654bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:1859850..1868598- (Ectocarpus species6 EcLAC_371)
ATGCTGCACGGGACGCCGTGCCCCTCGGGGCATTGCTCGAGGTCGGCAGC
GGGTCGTCCGCCGCCGACGTTCTCGAAAGGCTCTTTGGCGAACTCACACG
CCGCACGAAGTATGGCAATGGCCCAGCGATGGCAGGCGCGCTGGGGGCCA
CGAGGTGGACAGTACAGCGGAGCTTGGTCTGCCAGTCCTGCACACATGAA
TCTACGACGAGTTCCAGCCACAACCTCGTCCACGTGGTGGTACGGGAGCC
AGGAACAGTCAACGTGTTGGGGGCAGAGTGGGCCCATCTGCTCCGACAGG
CACTGTTGGAACAGCCCTTCGAGTATTGCTGGAGGTGAACCGAACCGCCG
AGAGGACTCTCTCAAGAACACGACGGCGGAGTACCCAATGGGCTGCCCTG
AGAACCTCATCATCGCTTTACACCAGAGGCATGCCAGGCTCGGGACACAC
ACAAACCCTGTGGCTCGCGCTAGAGAGATGGAGAGATTGCGCCGCCCGAG
CCCCCGACAACGGGTGCGTGCTATAGGGCGACAGTCTGAACATGGCCGTG
TTCATAGAGACAAGCGATCCTCCGGTCGTGTTATTGTACGATCTGGTCTG
TGTTACCCACGGACGCTTTGCTACTTCTGGGAATGCTGTCGCCTACACGC
ATAG
back to top