mRNA_Ecto-sp6_S_contig9.18202.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig9.18202.1
Unique NamemRNA_Ecto-sp6_S_contig9.18202.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
BLAST of mRNA_Ecto-sp6_S_contig9.18202.1 vs. uniprot
Match: D8LH05_ECTSI (Cryptic tubulin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH05_ECTSI)

HSP 1 Score: 1000 bits (2586), Expect = 0.000e+0
Identity = 599/641 (93.45%), Postives = 602/641 (93.92%), Query Frame = 2
Query:   29 MSCIHLHLGQAGIQLGESFWRLAEEEFLVDDVRAGGGGDGSYSGRGSGRATQPSRKPPMRRMRPRGTAMFHEDDGWARCLVVDSEPKVVQGFQGRVESLRPENAIYSQSGLANNWAMGFASCRHGSAGEEGPFSRCMEGMRKEAERSCWLNSAVMTHSLAGGTGSGLGSGLLQALRDEYPSLYLISACVGPFGTGDTPLQHYNSALALQHLQAYADCVIYRGNDDLLRGAAEASARISAGTSSPAASDSRWAASGGPRSGGGAAGWRPVGLLSRHGGSXXXXXXXXXXXSGRGRMVVSTADMNASLSLDMASYFFPTSRPFDRFQPAPPTVEGRPRSHQQXXXXXXXXXXXEMAQRPFDGGSLMAAAVPLPAAKFVDLRSTLSARPLASDSGGAGQGLFSSSSLPPSSATKKDWAALANDHGRKVPLCPRRAGGLDDDACVAAHHLIRGATFGAAGTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGEALRRHHECQEWRTASDVSCAP---------------ALRSQGVLRSVTTVCNQTRIRGVLGDVVKRAEGKFRARAYLHWYYRHGLEDEDFLAAFEGVRTVERGYDGLARAFGGSRGSGEARIVW 1906
            MSCIHLHLGQAGIQLGESFWRLAEEEFLVDDVRAGGGGDGSYSGRGSGRA  PSRKPPMRRMRP GTAMFHEDDGWARCLVVDSEPKVVQGFQGR+ESLRPENAIYSQSGLANNWAMGFASCR    GEEGPFSRCMEGMRKEAERSCWLNSAVMTHSLAGGTGSGLGSGLLQALRDEYPSLYLISACVGPFGTGDTPLQHYNSALALQHLQAYADCVIYRGNDDLLRGAAEASARISA TSSPA SDSRWAASGGPRSGGGAAGWRPVG+LSRHGGSXXXXXXXXXXXSGRGRMVVSTADMNASLSLDMASYFFPTSRPFDRFQPAPPTVEGRPRSHQQXXXXXXXX   EMAQRPFDGGSLMAAAVPLPAAKFVDLRSTLSA PLASDSGG GQGLFSSSSLP SS TKKDWAALANDHGRKVPLCPRRAGGLDDDACVAAHHLIRGATFGAAG   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  AGEALRRHHECQ+WRTASDVSCAP               ALRSQGVLRSVTTVCNQTRIRGVL DVVKRAEGKFRARAYLHWYYRHGLEDEDFLAAFEGVRTVERGYDGLARAFG S GSGEARIVW
Sbjct:    1 MSCIHLHLGQAGIQLGESFWRLAEEEFLVDDVRAGGGGDGSYSGRGSGRAALPSRKPPMRRMRPGGTAMFHEDDGWARCLVVDSEPKVVQGFQGRLESLRPENAIYSQSGLANNWAMGFASCRSDVRGEEGPFSRCMEGMRKEAERSCWLNSAVMTHSLAGGTGSGLGSGLLQALRDEYPSLYLISACVGPFGTGDTPLQHYNSALALQHLQAYADCVIYRGNDDLLRGAAEASARISAATSSPAVSDSRWAASGGPRSGGGAAGWRPVGVLSRHGGSXXXXXXXXXXXSGRGRMVVSTADMNASLSLDMASYFFPTSRPFDRFQPAPPTVEGRPRSHQQXXXXXXXX---EMAQRPFDGGSLMAAAVPLPAAKFVDLRSTLSAGPLASDSGGIGQGLFSSSSLPSSSTTKKDWAALANDHGRKVPLCPRRAGGLDDDACVAAHHLIRGATFGAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEAGEALRRHHECQKWRTASDVSCAPGCAQHSEWVRTLVHSALRSQGVLRSVTTVCNQTRIRGVLRDVVKRAEGKFRARAYLHWYYRHGLEDEDFLAAFEGVRTVERGYDGLARAFGCSSGSGEARIVW 638          
BLAST of mRNA_Ecto-sp6_S_contig9.18202.1 vs. uniprot
Match: A0A4D9CQS6_9STRA (Tubulin delta chain n=5 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CQS6_9STRA)

HSP 1 Score: 185 bits (469), Expect = 6.610e-47
Identity = 189/639 (29.58%), Postives = 246/639 (38.50%), Query Frame = 2
Query:   38 IHLHLGQAGIQLGESFWRLAEEEFLVDDVRAGGGGDGSYSGRGSGRATQPSRKPPMRRMRPRGTAMFHEDDGWARCLVVDSEPKVVQGFQ--GRVES-LRPENAIYSQSGLANNWAMGFASCRHGSAGEEGPFSRCMEGMRKEAERSCWLNSAVMTHSLAGGTGSGLGSGLLQALRDEYPSLYLISACVGPFGTGDTPLQHYNSALALQHLQAYADCVIYRGNDDLL------RGAAEASARISAGTSSPAASDSRWAASGGPRSGGGAAGWRPVGLLSRHGGSXXXXXXXXXXXSGRGRMVVSTADMNASLSLDMASYFFPTSRPFDRFQPAPPTVEGRPRSHQQXXXXXXXXXXXEMAQRPFDGGSLMAAAVPLPAAKFVDLRSTLSAR-----PLASD--SGGAGQGLFSSSSLPPSSATKKDWAALANDHGRKVPLC-PRRAGGLDDDACVAAHHLIRGATFGAAGTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGEALRRHHECQEWRTASDVSCAPALRSQGVLRSVTTV----------------CNQTRIRGVLGDVVKRAEGKFRARAYLHWYYRHGLEDEDFLAAFEGVRTVERGYDGL 1855
            +H+H+GQ G Q+GE FW LA ++F      A   GD S        +  P    P+          FHE DG A  + VDSE KVV   +   R+ S LR E  I   SG ANNWAMGF S     A   G F   +  +R+E ER   L S V+ HSLAGGTG+G+GS L Q LR+  PS+ + +  VGPF TGD   Q YNSAL L  L  +AD ++YR ND LL       GAA+ + R                         G +G R + L +                        S   +N SL+ D+A   FPT        P+ PT  G                      R +D  +L     P   AKFVD RS+ SA      P +S      AG GL          A    WA      G+ V    P   G    +  +AA   +RG      GTG                                                            L R      WR  S +    +  SQ  +   T+V                 N+T +   +  ++ RAE     RAYLHW++R+G+ED+DF AAFEG+R V+  YD L
Sbjct:    6 LHVHIGQCGNQIGEHFWSLAADDFAA----AADNGDAS--------SFSPQYPHPL----------FHEQDGRAAAVFVDSEAKVVDRLRKNSRLASVLRKEACITDSSGRANNWAMGFTSSCKELAQGRGLFYSTVNVLRRELERIDSLQSLVIYHSLAGGTGAGVGSALFQYLREACPSVNITTCSVGPFSTGDCATQWYNSALTLNALSEHADTILYRDNDQLLGEYLRVAGAAQGTGRR------------------------GMSGGRGLALATSK---------------------ASMGRLNESLAADLACLLFPTVT-----SPSIPTCGGG-------------------GYRAWDALALQHDCTPFKYAKFVDNRSSWSASAASTLPTSSVPFKAAAGHGLHHVPDGRLGGAGGGQWADECVYVGKDVIASFPTEDGRGKANVTLAAQMTVRGVDL--PGTGPHVPGQEQVSLSEHPRGKGGPQKSGQCRNSNRNHQKPQTSNPYLPPTPWHPGLTAFLHHDLPRALRLPSWRQGSAIGTVFSSHSQPSILPCTSVPAARPFSSSSPGVAICANRTHMSSTVEKILGRAEEMAEHRAYLHWFHRYGIEDDDFTAAFEGLRRVKEEYDEL 551          
BLAST of mRNA_Ecto-sp6_S_contig9.18202.1 vs. uniprot
Match: A0A8K1FBW7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FBW7_PYTOL)

HSP 1 Score: 156 bits (394), Expect = 4.710e-37
Identity = 164/662 (24.77%), Postives = 245/662 (37.01%), Query Frame = 2
Query:   38 IHLHLGQAGIQLGESFWRLAEEEFLVDDVRAGGGGDGSYSGRGSGRATQPSRKPPMRRMRPRGTAMFHEDDGWARCLVVDSEPKVVQGF--------QGRVESLRPENAIYSQSGLANNWAMGFASCRH-----------------------------GSAGEEGPFSRCMEGMRKEAERSCWLNSAVMTHSLAGGTGSGLGSGLLQALRDEYPSLYLISACVGPF-GTGDTPLQHYNSALALQHLQAYADCVIYRGNDDLLRGAAEASARISAGTSSPAASDSRWAASGGPRSGGGAAGWRPVGLLSRHGGSXXXXXXXXXXXSGRGRMVVSTADMNASLSLDMASYFFPTSRPFDRFQPAPPTVEGRPRSHQQXXXXXXXXXXXEMAQRPFDGGSLMAAAVPLPAAKFVDLRSTLSARPLASDSGGAGQGLFSSSSLPPSSATKKDWAALANDHGRKVPLCPRRAGGLDDDACVAAHHLIRGAT--FGAAGTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGEALRRHHE---CQEWRTASDVSCAPALRSQGVL-------------RSVTTVCNQTRIRGVLGDVVKRAEGKFRARAYLHWYYRHGLEDEDFLAAFEGVRTVERGYDGL 1855
            I +H+GQ G Q+G++FWRL E    V +  A      S     + RA +    P + R +     ++H   G ARC++VD+EPKV++           G      P +  + QSG  NNWAMG+    H                               + ++      ME ++KE E        V+ HSL GGTGSGLG  +L+ +RD YP  YL +  + P   +GDTPLQ+YN+   L HLQ YADCVIY+ NDDLLR A+                                  W+ +   S+   S             +     S  ++NA  + D+A Y FP             +     RS Q                +PFD G L+++  PLP+AKFVD+R+ +                     +    AT++  +  + D     PL     G  +D    AA  L++  T  F  + T                                                         AG  L         Q+  +A   +    + S+G+               SV+   N   +R  +   + R   +F+A+AY+HWY +HGLE+ DF  AF+    + + YD L
Sbjct:    3 IFVHVGQCGNQVGDAFWRLTES---VYEAPATSTASLSAKQAAASRARRKETPPTLYREQ-----LYHPQSGKARCILVDTEPKVIRSMLEARQHKATGSGSVFVPAHVHFEQSGRGNNWAMGYNLQTHRHNVLPSKSDASSMVPLTGTHKTKRVVIESRSAKQELLEMVMESLQKEIEGLDCYQGVVLMHSLGGGTGSGLGCRVLETIRDTYPRSYLTTVSIAPSCASGDTPLQNYNALFTLGHLQEYADCVIYKENDDLLRTASY---------------------------------WKTLRDQSQSNASPGREMGEEGLTKAK---KTSLQELNALAAADVAGYLFPIVA----------STSAGSRSIQMA--------------KPFDAGKLVSSCCPLPSAKFVDIRTGI---------------------VCDRQATQRKPSVGSVD-----PLFHTVIGRTNDTLDAAARRLLQQTTQSFPRSST-------------------------------------------MLPCLATSAMVRGFAGSDLTEKGTQALSQQLASAFPRAAWTRISSEGITYSSYSPFGPYSGKASVSICVNNGHVRSSVRHFLDRGRRQFQAKAYVHWYTQHGLEEADFERAFDQGTKIVQEYDAL 527          
BLAST of mRNA_Ecto-sp6_S_contig9.18202.1 vs. uniprot
Match: A0A7S0LEV1_9EUKA (Tubulin delta chain (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LEV1_9EUKA)

HSP 1 Score: 146 bits (368), Expect = 1.530e-36
Identity = 90/224 (40.18%), Postives = 120/224 (53.57%), Query Frame = 2
Query:   26 TMSCIHLHLGQAGIQLGESFWRLAEEEFLVDDVRAGGGGDGSYSGRGSGRATQPSRKPPMRRMRPRGTAMFHEDDGWARCLVVDSEPKVVQGFQGR--VESLRPENAIYSQSGLANNWAMGFASCRHGSA--GEEGPFSRCMEGMRKEAERSCWLNSAVMTHSLAGGTGSGLGSGLLQALRDEYPSLYLISACVGPFGTGDTPLQHYNSALALQHLQAYADCVI 685
            TM+ ++LH+GQAG ++G +FW LA +E                              P  RR       MF +D G  + + +DSEPKVV+G      VE +    A+  QSG  NNWAMGF    HG++  G        +E +R + ER  W + A + HSL GGTGSGLGS LLQALRD +P  YL S CVGPF  G+ PL  YN+ L+L +LQ +AD ++
Sbjct:   25 TMATVYLHVGQAGNEIGGAFWTLAAQE------------------------------PATRRW------MF-DDRGRCKAVFLDSEPKVVRGVANSIGVERIERHCALIDQSGRGNNWAMGF----HGTSEVGGSRVADAALEALRWQWERCDWCSGATLCHSLGGGTGSGLGSLLLQALRDAHPRHYLTSVCVGPFALGELPLSAYNATLSLSYLQEFADALV 207          
BLAST of mRNA_Ecto-sp6_S_contig9.18202.1 vs. uniprot
Match: V9FMD9_PHYPR (Tubulin domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=V9FMD9_PHYPR)

HSP 1 Score: 154 bits (388), Expect = 2.450e-36
Identity = 99/245 (40.41%), Postives = 132/245 (53.88%), Query Frame = 2
Query:   38 IHLHLGQAGIQLGESFWRLAEEEFLVDDVRAGGGGDG--SYSGRGSGRATQPSRKPPMRRMRPRGTAMFHEDDGWARCLVVDSEPKVVQGFQGRVE----SLRPENAIYSQSGLANNWAMGFASCRHGSAG----------EEGPFSRCMEGMRKEAER-SCWLNSAVMTHSLAGGTGSGLGSGLLQALRDEYPSLYLISACVGPFGT-GDTPLQHYNSALALQHLQAYADCVIYRGNDDLLRGA 718
            +HLH+GQ G QLG ++WRLA     + D +   G  G   +  R SG +T            PR   +FH   G ARC++VDSEPKVV+ F         +  P +    Q+G  NNWAMG+   R  S                    M+ +++E ER  C+  S VM HSL GGTGSGLG  +L+++RD YP  Y+++  V P  T GDTPLQ+YN+ L L+ LQ  AD VIY+ ND+LLR A
Sbjct:    3 VHLHVGQCGNQLGAAYWRLAAASGEIHDDKRSQGNTGVSRHLRRASGGSTSTLNGSKKAVSLPR--PLFHPSTGAARCILVDSEPKVVRSFMQETTDGATAFEPAHTHVEQTGRGNNWAMGYYGPRLKSPAPTFTSLAVDDRRELVELVMDSLQREIERVDCYQGSVVM-HSLGGGTGSGLGCRVLESMRDTYPKAYILTTSVAPSCTSGDTPLQNYNAILTLKCLQDVADAVIYKDNDELLRTA 244          
BLAST of mRNA_Ecto-sp6_S_contig9.18202.1 vs. uniprot
Match: A0A0M0KBU0_9EUKA (Cryptic tubulin n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0KBU0_9EUKA)

HSP 1 Score: 151 bits (381), Expect = 3.880e-36
Identity = 96/233 (41.20%), Postives = 119/233 (51.07%), Query Frame = 2
Query:   29 MSCIHLHLGQAGIQLGESFWRLAEEEFLVDDVRAGGGGDGSYSGRGSGRATQPSRKPPMRRMRPRGTAMFHEDDGWARCLVVDSEPKVVQGFQGRVESLRPEN-----AIYSQSGLANNWAMGFASCRHGSAGEEGPFSRCMEGMRKEAERSCWLNSAVMTHSLAGGTGSGLGSGLLQALRDEYPSLYLISACVGPFGTGDTPLQHYNSALALQHLQAYADCVIYRGNDDLLR 712
            MS I +H GQAG ++G   WRLA  E                             KPP R         F ++ G AR + VD+EPKVV+G    V SL PE      A+  QSG  NNWAMG+     G  G  G     +E +R + ER  W    V++HS+ GGTGSGLGS LLQ LRDE+P  YL +A + PF  G+ PL HYN+ LAL  LQ +AD +I   N  LLR
Sbjct:    1 MSTIFVHCGQAGNEIGGVVWRLAWAE-----------------------------KPPRR--------WFFDERGTARAVFVDTEPKVVRGV---VRSLGPERVHPRCALVEQSGRGNNWAMGYGGVDGG--GRNGIADAALEALRWQWERCDWCTGVVLSHSIGGGTGSGLGSLLLQELRDEHPRHYLTAAAMCPFAAGELPLGHYNATLALSFLQEFADAIILFDNTQLLR 191          
BLAST of mRNA_Ecto-sp6_S_contig9.18202.1 vs. uniprot
Match: A0A329SNZ5_9STRA (Tubulin domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SNZ5_9STRA)

HSP 1 Score: 150 bits (379), Expect = 3.660e-35
Identity = 102/246 (41.46%), Postives = 132/246 (53.66%), Query Frame = 2
Query:   38 IHLHLGQAGIQLGESFWRLAEEEFLVDDVRAGGGGDGSYSG--RGSGRATQPSRKPPMRRMRPRGTAMFHEDDGWARCLVVDSEPKVVQG-----FQGRVESLRPENAIYSQSGLANNWAMGFASCRHGSA----------GEEGPFSRCMEGMRKEAER-SCWLNSAVMTHSLAGGTGSGLGSGLLQALRDEYPSLYLISACVGPFGT-GDTPLQHYNSALALQHLQAYADCVIYRGNDDLLRGA 718
            +HLH+GQ G QLG ++WRLA     + D     G  G+     R SG +T   +        PR   +FH   G ARC++VDSEPKV++        G V  L P  A   Q+G  NNWAMG+   R  S                    M+ +R E E   C+  S VM HSL GGTGSGLG  +L+++RD YP  Y+++A V P  T GDTPLQ+YN+ L L+ LQ  AD VIY+ ND+LLR A
Sbjct:    3 VHLHVGQCGNQLGAAYWRLAASSGEIQDGNRNRGDTGASRPLRRASGGSTAAIKGAKEAVSLPR--QLFHPSTGAARCILVDSEPKVIRAVCHEVIDGAVACL-PAYAHVEQAGRGNNWAMGYYGPRLKSPTPAFTSLAVDDHRELVELVMDSLRHEIEGVDCYQGSVVM-HSLGGGTGSGLGCRVLESMRDTYPKAYIVTASVAPSCTRGDTPLQNYNAVLTLKCLQDVADAVIYKDNDELLRTA 244          
BLAST of mRNA_Ecto-sp6_S_contig9.18202.1 vs. uniprot
Match: A0A7S2GRB2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GRB2_9STRA)

HSP 1 Score: 145 bits (366), Expect = 4.490e-35
Identity = 81/224 (36.16%), Postives = 113/224 (50.45%), Query Frame = 2
Query:   38 IHLHLGQAGIQLGESFWRLAEEEFLVDDVRAGGGGDGSYSGRGSGRATQPSRKPPMRRMRPRGTAMFHEDDGWARCLVVDSEPKVVQGFQGRVESL-RPENAIYSQSGLANNWAMGFASCRHGSAGEEGPFSRCMEGMRKEAERSCWLNSAVMTHSLAGGTGSGLGSGLLQALRDEYPSLYLISACVGPFGTGDTPLQHYNSALALQHLQAYADCVIYRGNDDL 706
            I +H+GQ G QL   FWRLAEE+ +                                  R     +F   D  ARCL++D+EP+        ++++ RP N I ++ G  NN+A G   C   S    G F+   +  R+EAER   L S ++THS +GGTGS   + L+Q LRD YP  +L+   VGPFG GD+PLQHYN+  + Q +   AD V+Y  ND+L
Sbjct:    3 IFVHIGQCGTQLALPFWRLAEEDRVSS--------------------------------RELWNPLFDPGDSAARCLLIDAEPRAAAQTAASLQNVVRPSNIILAREGRGNNFAFGLQQCMSESNQGRGLFAASTDAFRREAERCDSLRSVILTHSTSGGTGSSTSAALMQHLRDIYPRRWLLPVAVGPFGRGDSPLQHYNTLFSTQAMHILADGVVYTDNDEL 194          
BLAST of mRNA_Ecto-sp6_S_contig9.18202.1 vs. uniprot
Match: UPI00112E238B (tubulin delta chain-like n=1 Tax=Rhinatrema bivittatum TaxID=194408 RepID=UPI00112E238B)

HSP 1 Score: 145 bits (367), Expect = 9.510e-35
Identity = 98/256 (38.28%), Postives = 126/256 (49.22%), Query Frame = 2
Query:   26 TMSCIHLHLGQAGIQLGESFWRLAEEEF-------------------------LVDDVRAGGGGDGSYSGRGSGRATQPSRKPPMRRMRPRGTAMFHEDDGWARCLVVDSEPKVVQGFQGRVES--LRPENAIYSQSGLANNWAMGFASCRHGSAGEEGPFSRCMEGMRKEAERSCWLNSAVMTHSLAGGTGSGLGSGLLQALRDEYPSLYLISACVGPFGTGDTPLQHYNSALALQHLQAYADCVIYRGNDDLLR 712
            TMS + L LGQ G QLG  +W+L   E                          ++   R G     S  G  SG    P+R P            F   DG    L VDSEPKV++  Q +++    R  N I  QSG  NNWA G+      S GE     R ME +RKE ER    +  V+ HSL+GGTGSGLG+ L +A+RDEYP  Y++S  V P   G++PLQHYNS L+L  LQ YAD ++   ND +L+
Sbjct:   11 TMSAVWLQLGQCGNQLGLEWWQLLTNESAAHQESDRSPFSSSCLSLLRLPRHNILGKGRRGRNCRCSSIGLKSG--GHPARYP------------FFARDGKLSALCVDSEPKVIRKLQKQIKKGVFRDSNLILGQSGRGNNWAYGYHDLH--SEGETSLLQRTMESLRKEVERRDCYSGTVLLHSLSGGTGSGLGARLCEAIRDEYPLGYILSVTVAPHQAGESPLQHYNSLLSLSWLQRYADGILLFHNDSVLK 250          
BLAST of mRNA_Ecto-sp6_S_contig9.18202.1 vs. uniprot
Match: UPI001B88C6A1 (tubulin delta chain-like isoform X1 n=2 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88C6A1)

HSP 1 Score: 147 bits (370), Expect = 1.010e-34
Identity = 84/229 (36.68%), Postives = 119/229 (51.97%), Query Frame = 2
Query:   29 MSCIHLHLGQAGIQLGESFWRLAEEEFLVDDVRAGGGGDGSYSGRGSGRATQPSRKPPMRRMRPRGTAMFHEDDGWARCLVVDSEPKVVQGFQGRVES-LRPENAIYSQSGLANNWAMGFASCRHGSAGEEGPFSRCMEGMRKEAERSCWLNSAVMTHSLAGGTGSGLGSGLLQALRDEYPSLYLISACVGPFGTGDTPLQHYNSALALQHLQAYADCVIYRGNDDLLR 712
            MS + LH+GQ G Q+G SFW++A ++   ++                                   +A F + +   R + VDSEPKVV        S +R +N +  + G  +NWAMG+   +  S G++      ++ +R   ER       V+ HSLAGGTGSGLGS L + LRDEYP  YL+S  + PF +G++PLQHYNS L L HLQ Y D VI   ND++L+
Sbjct:    1 MSTVFLHVGQCGNQVGRSFWKIANQDKKAEN-----------------------------------SATFVDAEKMQRSVHVDSEPKVVHSLIANQRSRVRKKNVLAGKRGRGSNWAMGYYGLQ--SKGDDTLVENTIDAVRHVVERCDSFTGTVVMHSLAGGTGSGLGSRLCECLRDEYPMNYLLSCAIAPFASGESPLQHYNSLLTLSHLQRYCDGVIVSYNDEVLK 192          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18202.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LH05_ECTSI0.000e+093.45Cryptic tubulin n=1 Tax=Ectocarpus siliculosus Tax... [more]
A0A4D9CQS6_9STRA6.610e-4729.58Tubulin delta chain n=5 Tax=Monodopsidaceae TaxID=... [more]
A0A8K1FBW7_PYTOL4.710e-3724.77Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S0LEV1_9EUKA1.530e-3640.18Tubulin delta chain (Fragment) n=1 Tax=Coccolithus... [more]
V9FMD9_PHYPR2.450e-3640.41Tubulin domain-containing protein n=10 Tax=Phytoph... [more]
A0A0M0KBU0_9EUKA3.880e-3641.20Cryptic tubulin n=1 Tax=Chrysochromulina tobinii T... [more]
A0A329SNZ5_9STRA3.660e-3541.46Tubulin domain-containing protein n=2 Tax=Phytopht... [more]
A0A7S2GRB2_9STRA4.490e-3536.16Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
UPI00112E238B9.510e-3538.28tubulin delta chain-like n=1 Tax=Rhinatrema bivitt... [more]
UPI001B88C6A11.010e-3436.68tubulin delta chain-like isoform X1 n=2 Tax=Gigant... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig9contigEcto-sp6_S_contig9:1834570..1839121 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score1003.0
Seed ortholog evalue6e-290
Seed eggNOG ortholog2880.D8LH05
Model size2090
KEGG koko:K07375,ko:K10390
KEGG Pathwayko04145,ko04540,ko05130,map04145,map04540,map05130
Hectar predicted targeting categoryother localisation
Exons6
EggNOG free text desc.microtubule nucleation
EggNOG OGsCOG5023@1,KOG1374@2759
Cds size1881
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03036,ko04147,ko04812
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig9.18202.1prot_Ecto-sp6_S_contig9.18202.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig9 1834751..1839093 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350536.3972216-UTR-Ecto-sp6_S_contig9:1834569..18347501682350536.3972216-UTR-Ecto-sp6_S_contig9:1834569..1834750Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig9 1834570..1834750 -
1682350536.4647024-UTR-Ecto-sp6_S_contig9:1839093..18391211682350536.4647024-UTR-Ecto-sp6_S_contig9:1839093..1839121Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig9 1839094..1839121 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350536.4092674-CDS-Ecto-sp6_S_contig9:1834750..18348891682350536.4092674-CDS-Ecto-sp6_S_contig9:1834750..1834889Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 1834751..1834889 -
1682350536.4180129-CDS-Ecto-sp6_S_contig9:1835809..18359361682350536.4180129-CDS-Ecto-sp6_S_contig9:1835809..1835936Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 1835810..1835936 -
1682350536.427011-CDS-Ecto-sp6_S_contig9:1836378..18374741682350536.427011-CDS-Ecto-sp6_S_contig9:1836378..1837474Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 1836379..1837474 -
1682350536.4358847-CDS-Ecto-sp6_S_contig9:1837794..18379311682350536.4358847-CDS-Ecto-sp6_S_contig9:1837794..1837931Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 1837795..1837931 -
1682350536.444631-CDS-Ecto-sp6_S_contig9:1838339..18384601682350536.444631-CDS-Ecto-sp6_S_contig9:1838339..1838460Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 1838340..1838460 -
1682350536.454381-CDS-Ecto-sp6_S_contig9:1838832..18390931682350536.454381-CDS-Ecto-sp6_S_contig9:1838832..1839093Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 1838833..1839093 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig9.18202.1

>prot_Ecto-sp6_S_contig9.18202.1 ID=prot_Ecto-sp6_S_contig9.18202.1|Name=mRNA_Ecto-sp6_S_contig9.18202.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=627bp
MSCIHLHLGQAGIQLGESFWRLAEEEFLVDDVRAGGGGDGSYSGRGSGRA
TQPSRKPPMRRMRPRGTAMFHEDDGWARCLVVDSEPKVVQGFQGRVESLR
PENAIYSQSGLANNWAMGFASCRHGSAGEEGPFSRCMEGMRKEAERSCWL
NSAVMTHSLAGGTGSGLGSGLLQALRDEYPSLYLISACVGPFGTGDTPLQ
HYNSALALQHLQAYADCVIYRGNDDLLRGAAEASARISAGTSSPAASDSR
WAASGGPRSGGGAAGWRPVGLLSRHGGSGGGGGGGGGGASGRGRMVVSTA
DMNASLSLDMASYFFPTSRPFDRFQPAPPTVEGRPRSHQQQQQQQQQQQR
QEMAQRPFDGGSLMAAAVPLPAAKFVDLRSTLSARPLASDSGGAGQGLFS
SSSLPPSSATKKDWAALANDHGRKVPLCPRRAGGLDDDACVAAHHLIRGA
TFGAAGTGASAAARNGGGMSAGRSLESNSRRRRSRGGGRVGETPPVVASA
VAAGAGAMSAAAEEAGEALRRHHECQEWRTASDVSCAPALRSQGVLRSVT
TVCNQTRIRGVLGDVVKRAEGKFRARAYLHWYYRHGLEDEDFLAAFEGVR
TVERGYDGLARAFGGSRGSGEARIVW*
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mRNA from alignment at Ecto-sp6_S_contig9:1834570..1839121-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig9.18202.1 ID=mRNA_Ecto-sp6_S_contig9.18202.1|Name=mRNA_Ecto-sp6_S_contig9.18202.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=4552bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:1834570..1839121- (Ectocarpus species6 EcLAC_371)
CAGGGTTGCAGTTGCAGCAGTGGTGACGATGTCGTGCATCCACCTCCACT TGGGCCAGGCCGGAATCCAGCTGGGCGAGTCGTTTTGGAGGCTAGCGGAG GAAGAATTTCTCGTCGACGACGTGAGGGCGGGAGGCGGAGGCGACGGCAG CTACAGTGGCAGGGGTAGCGGCCGTGCAACACAGCCGTCGAGAAAGCCGC CGATGCGTCGGATGCGGCCCAGAGGGACGGCTATGTTCCACGAAGACGAC GGCTGGGCGAGGTGCCTGGTGGTGGATAGCGAGCCCAAGGTCGGCATCCA AGTGCGCGTTGGGGACGGAGGGGGGGCTGTGGAATATCCTGGCCTGTTGA CAGCGCATGTTTGCATCCCATGTTTTGGGGGTTCGTCTGGGTGCAAACAG CAAATGTAGCTCTCGCTACTAGATGCGCACGACCACGACTGTGGGCAGGC ACGCAGCCGCGCAGTTCGAAGTCAGGAGGAGTTCGGAGGGCAAAGTCCCA CGTAAGAGGACTGTTGCAGGTGCCATCTATTCTACGGCGTTTCGCCGCTC AGAGCCCTCAAGGCCTTGCGGGCACATGTTGGAGCACCAAACCGTCCCCG CGTTTTGAATCGATTCGCTTCAGTAGTGTACCCTTGATATTGCAGAACCG TTTTTCGACAGGTGGTGCAAGGCTTCCAAGGTCGCGTGGAGTCACTTCGG CCGGAGAACGCTATCTACTCGCAGAGCGGTCTGGCCAACAACTGGGCCAT GGGTTTCGCTTCTTGCAGGCATGGCAGTGCCGGTGGCGGGGGCGGGGGCA GTAACAGTGGGGAGGCTTGTATGAATGCGTGGTTAGCTGGCGAGACCAGC TACCTTATTAGGTTAGGGTTATTAGGTATTCAAGTGTTGAAAACCTTTAT TACTGCAAGTAGGGCGTACCCATGACGTTCCAGGATGTAAACTCATCAAG AAATCGAGGGTGACAAACATACCACGACGGGATGCGTGTGTATATCCTTA GCATCGACAGTTTTTTGCATCGTTGGGCATAGAATTTTTTGGCATCGGCT CCACGTCTCCTGCAGTATGTACTCAACAGCAGGGGCTCGAACGCTTTTGC GTGAGCAGCAGGTGGATGCATGTCGGGCGATAAATAATCCAAGACATCTT GAATATATCGCCGTGAAATGCTCCAGATCCGATGTTGGAGGGGAAGAGGG CCCGTTCTCTCGCTGTATGGAGGGGATGCGGAAAGAGGCAGAGCGGTCTT GCTGGCTCAACAGCGCCGTGATGACGCACAGCTTGGCGGGCGGGACGGGC TCAGGCCTTGGCTCGGGTCTGCTCCAGGTGAGATGAGACGGTACACTCGA CGCCGTGCTGCACTGCCGTGTTTGTTGCTGCAACTGCGGTAGTGCTGATC TGTGACGAGAGTTAAGGTTCAGAATGGTGGCTTGCACCAGAGGTCTTCAC GGAAGCGAACGTTGCGCAGGGGAATCGTGAGCACGACGCTACGAGCAGAA GGAGAAACTAGCGTGTACAAGTCGTTGCAGTCGTAAGTTGCAATTGGTAC TTCGCTTCCTTGTGCCCAGGGTCCCGATCAATCACCTCGCTGCCCCCCCC CGCCCCCCCCTCTTGGAAACAAACGCGCATCCCACGGGGAAAAAAAGGCG CTGCGCGACGAGTACCCATCCCTGTACCTCATATCAGCCTGCGTGGGACC CTTCGGGACCGGCGACACCCCTCTGCAACACTACAACTCCGCGCTGGCTC TCCAGCACCTCCAGGCCTACGCCGACTGCGTGATCTACCGGGGGAACGAC GATCTCCTCCGAGGGGCCGCTGAGGCATCGGCCAGGATAAGCGCGGGGAC GTCTTCGCCGGCGGCGTCCGATTCACGATGGGCCGCGAGCGGCGGACCCC GAAGCGGCGGCGGGGCCGCGGGGTGGCGCCCGGTCGGTCTGTTGTCGAGA CACGGCGGTAGCGGCGGCGGTGGCGGTGGGGGTGGTGGTGGTGCCTCGGG AAGGGGAAGGATGGTCGTTTCCACGGCGGATATGAACGCCTCCCTATCTC TGGACATGGCGTCCTACTTCTTCCCGACCAGCCGGCCGTTTGACCGCTTC CAACCCGCGCCGCCGACGGTAGAAGGCCGCCCCCGCTCCCACCAACAGCA GCAGCAGCAGCAGCAGCAGCAGCAACGTCAAGAGATGGCGCAGAGGCCCT TCGATGGGGGCTCTCTGATGGCAGCCGCCGTCCCCCTCCCTGCGGCGAAG TTCGTGGACTTGCGTTCGACGCTCTCCGCCAGACCCCTTGCTTCTGATAG TGGTGGTGCTGGTCAGGGCTTGTTCTCGTCGTCATCGCTACCGCCTTCGT CGGCAACGAAGAAGGACTGGGCAGCGCTCGCCAACGACCACGGGAGAAAG GTGCCCCTCTGCCCGCGGAGGGCGGGCGGGCTCGACGACGACGCTTGCGT CGCGGCGCACCACCTCATTCGCGGGGCCACCTTTGGCGCGGCAGGAACCG GTGCTTCTGCGGCTGCCCGTAACGGTGGAGGTATGAGCGCTGGACGTTCC TTGGAGTCCAACAGCCGACGGCGAAGAAGCCGCGGTGGCGGGCGCGTTGG AGAGACCCCTCCGGTGGTAGCTTCAGCAGTGGCGGCTGGAGCGGGGGCGA TGTCGGCTGCGGCCGAGGAAGCCGGCGAAGCGTTGCGACGGCATCACGAG TGCCAGGAGTGGCGGACTGCGAGCGATGTCTCTTGCGCTCCCGGTACGAA GAATTACAGTCCCGGGGAATGTGGGACGGAAAATCGGCGGGGGGGGGAGG AGGCAAACACCTTTCACGCAGAATTTATTTTTCAAGAAGCACATGATTGC CACGCGGACGAGCCCACTCACTCAGTTGGCAATGATATATGATCCCTTTC TAGGTTGGGTTCAGCGGGCATAGTGAATAGATGCGTACGTTGGTTCATTC AGCTGAGTGCGCGGTTGCACTTTCTGTGGCTCTCGGGGCCCGAAGCAGAT CACCGGGGCGTTAGATGGAAACGACGAATGGCCCAGTTAGTCTTCATAGA GCTAGAGAACAGCCCGCCTAGCTCAACGCGCTTGGTATGGAACGGAGCCT TGTACTTCCGCTGCACCATCATTTTTTCACTCCCTCGTCGTCTTCACACG CGCTCGCTTCCATGCACACACGACGACACCCGCAGCCCTACGCTCCCAAG GGGTGTTGCGGTCCGTGACGACGGTGTGCAACCAGACGAGAATACGCGGG GTCCTCGGCGACGTTGTCAAGCGAGCGGAGGGCAAGTTTCGGGCGAGGGC ATACCTACACTGGTAGGTGACGGGTACTGTTACTACAAATGCGGCGTCAC AACCACCACAACATAACATCAACCTGCGGAGAAGGGATCAAAGGTTTCCC GACAGTTGAACCCATGGTCTCAGACAGACCTCAACAGTTGTCACTACTGA CCCGTAACAGCACTTGCTTCCGCATTATCCAGTTGCCGCACCACCGGTAG ACACGGGTTGCACCGAGTTCTCTGTCGAGGTCAACAGTGTTGGGGGGGGT TCCGAGAGTTAATTCTGAGCATACTCAAAAGTTTAGGCGAAAACGGAAGA GGAGCGTGTGGACCGTTCTGTCGCCCGTGTGACTTCCAACAACCTTCGCC GTGAGATCGTGGAGAGAGGGATAGAGAGCGAGAGCTTTAGAAAGTGGATC GACGGGGTGGAGAACCTTCGTTAGTCGTTCGAGAAGCTTGAGAGGCCCAA GAATTGTTTGTGGTTCTTGGCGACCCAAAACTCCTTCGAAGTGATATATT GAGAGAGGGACGGAGAGTGCCCGCCTTTCACTTGTACAGGACGGTTGGTT ATTCAATAGGTCGAGGAGTCGGGACTTCTGACTTATCACGATCGAGAACA GATAGCAGGCCCCTATTCGAAGAAGTACTTTGTGGGACGCTTGCGCTCAT TCGTTCGTTCGTTCAATCCAAAACACAAACATGCTCGCTGATCTTCAAAT CGTGCTGCGAAAACGTGTTTCTGCGACGCGTGTTGCCATCTGGTATGCGA ACGACCTTGGCAATCCGGCATGATGCATCGAATTGAACCCCACGCTGATG AAGGAATGACACGTTCATATAGATGCAATTAACATGAGGCAAGTTTCGGA CTTCTAACGTATGTATGTTCGCCTACTTTCTGCGGGCACCGAACTGCTTC CTTCCTTCTCTACTCGTTCTCTGTCCCTCGAGGTACTACCGACATGGTTT GGAAGACGAGGACTTTCTGGCAGCCTTTGAGGGCGTGCGAACGGTGGAGC GCGGCTACGATGGACTCGCGAGGGCGTTCGGTGGCTCCAGGGGCAGCGGA GAAGCAAGAATCGTGTGGTAGCCCCAGCAGGGATGCAGCAATACATGCCT GTGCAAAACGCAGGAAAGAGACCTGGACGAGACATCGCGAGAGTAGGATG GTGCTTGTACTGTAAGCGGAACTCAGGACTGAACGCAAAACCAAACGTGA TGGTCCGGGTGATCGTTCTCCTTTTGGTGTTACCCCGTGAATTCCATCAC TA
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig9:1834570..1839121-

>mRNA_Ecto-sp6_S_contig9.18202.1 ID=mRNA_Ecto-sp6_S_contig9.18202.1|Name=mRNA_Ecto-sp6_S_contig9.18202.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1881bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:1834570..1839121- (Ectocarpus species6 EcLAC_371)
ATGTCGTGCATCCACCTCCACTTGGGCCAGGCCGGAATCCAGCTGGGCGA
GTCGTTTTGGAGGCTAGCGGAGGAAGAATTTCTCGTCGACGACGTGAGGG
CGGGAGGCGGAGGCGACGGCAGCTACAGTGGCAGGGGTAGCGGCCGTGCA
ACACAGCCGTCGAGAAAGCCGCCGATGCGTCGGATGCGGCCCAGAGGGAC
GGCTATGTTCCACGAAGACGACGGCTGGGCGAGGTGCCTGGTGGTGGATA
GCGAGCCCAAGGTGGTGCAAGGCTTCCAAGGTCGCGTGGAGTCACTTCGG
CCGGAGAACGCTATCTACTCGCAGAGCGGTCTGGCCAACAACTGGGCCAT
GGGTTTCGCTTCTTGCAGGCATGGCAGTGCCGGGGAAGAGGGCCCGTTCT
CTCGCTGTATGGAGGGGATGCGGAAAGAGGCAGAGCGGTCTTGCTGGCTC
AACAGCGCCGTGATGACGCACAGCTTGGCGGGCGGGACGGGCTCAGGCCT
TGGCTCGGGTCTGCTCCAGGCGCTGCGCGACGAGTACCCATCCCTGTACC
TCATATCAGCCTGCGTGGGACCCTTCGGGACCGGCGACACCCCTCTGCAA
CACTACAACTCCGCGCTGGCTCTCCAGCACCTCCAGGCCTACGCCGACTG
CGTGATCTACCGGGGGAACGACGATCTCCTCCGAGGGGCCGCTGAGGCAT
CGGCCAGGATAAGCGCGGGGACGTCTTCGCCGGCGGCGTCCGATTCACGA
TGGGCCGCGAGCGGCGGACCCCGAAGCGGCGGCGGGGCCGCGGGGTGGCG
CCCGGTCGGTCTGTTGTCGAGACACGGCGGTAGCGGCGGCGGTGGCGGTG
GGGGTGGTGGTGGTGCCTCGGGAAGGGGAAGGATGGTCGTTTCCACGGCG
GATATGAACGCCTCCCTATCTCTGGACATGGCGTCCTACTTCTTCCCGAC
CAGCCGGCCGTTTGACCGCTTCCAACCCGCGCCGCCGACGGTAGAAGGCC
GCCCCCGCTCCCACCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAACGT
CAAGAGATGGCGCAGAGGCCCTTCGATGGGGGCTCTCTGATGGCAGCCGC
CGTCCCCCTCCCTGCGGCGAAGTTCGTGGACTTGCGTTCGACGCTCTCCG
CCAGACCCCTTGCTTCTGATAGTGGTGGTGCTGGTCAGGGCTTGTTCTCG
TCGTCATCGCTACCGCCTTCGTCGGCAACGAAGAAGGACTGGGCAGCGCT
CGCCAACGACCACGGGAGAAAGGTGCCCCTCTGCCCGCGGAGGGCGGGCG
GGCTCGACGACGACGCTTGCGTCGCGGCGCACCACCTCATTCGCGGGGCC
ACCTTTGGCGCGGCAGGAACCGGTGCTTCTGCGGCTGCCCGTAACGGTGG
AGGTATGAGCGCTGGACGTTCCTTGGAGTCCAACAGCCGACGGCGAAGAA
GCCGCGGTGGCGGGCGCGTTGGAGAGACCCCTCCGGTGGTAGCTTCAGCA
GTGGCGGCTGGAGCGGGGGCGATGTCGGCTGCGGCCGAGGAAGCCGGCGA
AGCGTTGCGACGGCATCACGAGTGCCAGGAGTGGCGGACTGCGAGCGATG
TCTCTTGCGCTCCCGCCCTACGCTCCCAAGGGGTGTTGCGGTCCGTGACG
ACGGTGTGCAACCAGACGAGAATACGCGGGGTCCTCGGCGACGTTGTCAA
GCGAGCGGAGGGCAAGTTTCGGGCGAGGGCATACCTACACTGGTACTACC
GACATGGTTTGGAAGACGAGGACTTTCTGGCAGCCTTTGAGGGCGTGCGA
ACGGTGGAGCGCGGCTACGATGGACTCGCGAGGGCGTTCGGTGGCTCCAG
GGGCAGCGGAGAAGCAAGAATCGTGTGGTAG
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