mRNA_Ecto-sp6_S_contig9.18202.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig9.18202.1 vs. uniprot
Match: D8LH05_ECTSI (Cryptic tubulin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH05_ECTSI) HSP 1 Score: 1000 bits (2586), Expect = 0.000e+0 Identity = 599/641 (93.45%), Postives = 602/641 (93.92%), Query Frame = 2
Query: 29 MSCIHLHLGQAGIQLGESFWRLAEEEFLVDDVRAGGGGDGSYSGRGSGRATQPSRKPPMRRMRPRGTAMFHEDDGWARCLVVDSEPKVVQGFQGRVESLRPENAIYSQSGLANNWAMGFASCRHGSAGEEGPFSRCMEGMRKEAERSCWLNSAVMTHSLAGGTGSGLGSGLLQALRDEYPSLYLISACVGPFGTGDTPLQHYNSALALQHLQAYADCVIYRGNDDLLRGAAEASARISAGTSSPAASDSRWAASGGPRSGGGAAGWRPVGLLSRHGGSXXXXXXXXXXXSGRGRMVVSTADMNASLSLDMASYFFPTSRPFDRFQPAPPTVEGRPRSHQQXXXXXXXXXXXEMAQRPFDGGSLMAAAVPLPAAKFVDLRSTLSARPLASDSGGAGQGLFSSSSLPPSSATKKDWAALANDHGRKVPLCPRRAGGLDDDACVAAHHLIRGATFGAAGTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGEALRRHHECQEWRTASDVSCAP---------------ALRSQGVLRSVTTVCNQTRIRGVLGDVVKRAEGKFRARAYLHWYYRHGLEDEDFLAAFEGVRTVERGYDGLARAFGGSRGSGEARIVW 1906
MSCIHLHLGQAGIQLGESFWRLAEEEFLVDDVRAGGGGDGSYSGRGSGRA PSRKPPMRRMRP GTAMFHEDDGWARCLVVDSEPKVVQGFQGR+ESLRPENAIYSQSGLANNWAMGFASCR GEEGPFSRCMEGMRKEAERSCWLNSAVMTHSLAGGTGSGLGSGLLQALRDEYPSLYLISACVGPFGTGDTPLQHYNSALALQHLQAYADCVIYRGNDDLLRGAAEASARISA TSSPA SDSRWAASGGPRSGGGAAGWRPVG+LSRHGGSXXXXXXXXXXXSGRGRMVVSTADMNASLSLDMASYFFPTSRPFDRFQPAPPTVEGRPRSHQQXXXXXXXX EMAQRPFDGGSLMAAAVPLPAAKFVDLRSTLSA PLASDSGG GQGLFSSSSLP SS TKKDWAALANDHGRKVPLCPRRAGGLDDDACVAAHHLIRGATFGAAG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AGEALRRHHECQ+WRTASDVSCAP ALRSQGVLRSVTTVCNQTRIRGVL DVVKRAEGKFRARAYLHWYYRHGLEDEDFLAAFEGVRTVERGYDGLARAFG S GSGEARIVW
Sbjct: 1 MSCIHLHLGQAGIQLGESFWRLAEEEFLVDDVRAGGGGDGSYSGRGSGRAALPSRKPPMRRMRPGGTAMFHEDDGWARCLVVDSEPKVVQGFQGRLESLRPENAIYSQSGLANNWAMGFASCRSDVRGEEGPFSRCMEGMRKEAERSCWLNSAVMTHSLAGGTGSGLGSGLLQALRDEYPSLYLISACVGPFGTGDTPLQHYNSALALQHLQAYADCVIYRGNDDLLRGAAEASARISAATSSPAVSDSRWAASGGPRSGGGAAGWRPVGVLSRHGGSXXXXXXXXXXXSGRGRMVVSTADMNASLSLDMASYFFPTSRPFDRFQPAPPTVEGRPRSHQQXXXXXXXX---EMAQRPFDGGSLMAAAVPLPAAKFVDLRSTLSAGPLASDSGGIGQGLFSSSSLPSSSTTKKDWAALANDHGRKVPLCPRRAGGLDDDACVAAHHLIRGATFGAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEAGEALRRHHECQKWRTASDVSCAPGCAQHSEWVRTLVHSALRSQGVLRSVTTVCNQTRIRGVLRDVVKRAEGKFRARAYLHWYYRHGLEDEDFLAAFEGVRTVERGYDGLARAFGCSSGSGEARIVW 638
BLAST of mRNA_Ecto-sp6_S_contig9.18202.1 vs. uniprot
Match: A0A4D9CQS6_9STRA (Tubulin delta chain n=5 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CQS6_9STRA) HSP 1 Score: 185 bits (469), Expect = 6.610e-47 Identity = 189/639 (29.58%), Postives = 246/639 (38.50%), Query Frame = 2
Query: 38 IHLHLGQAGIQLGESFWRLAEEEFLVDDVRAGGGGDGSYSGRGSGRATQPSRKPPMRRMRPRGTAMFHEDDGWARCLVVDSEPKVVQGFQ--GRVES-LRPENAIYSQSGLANNWAMGFASCRHGSAGEEGPFSRCMEGMRKEAERSCWLNSAVMTHSLAGGTGSGLGSGLLQALRDEYPSLYLISACVGPFGTGDTPLQHYNSALALQHLQAYADCVIYRGNDDLL------RGAAEASARISAGTSSPAASDSRWAASGGPRSGGGAAGWRPVGLLSRHGGSXXXXXXXXXXXSGRGRMVVSTADMNASLSLDMASYFFPTSRPFDRFQPAPPTVEGRPRSHQQXXXXXXXXXXXEMAQRPFDGGSLMAAAVPLPAAKFVDLRSTLSAR-----PLASD--SGGAGQGLFSSSSLPPSSATKKDWAALANDHGRKVPLC-PRRAGGLDDDACVAAHHLIRGATFGAAGTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGEALRRHHECQEWRTASDVSCAPALRSQGVLRSVTTV----------------CNQTRIRGVLGDVVKRAEGKFRARAYLHWYYRHGLEDEDFLAAFEGVRTVERGYDGL 1855
+H+H+GQ G Q+GE FW LA ++F A GD S + P P+ FHE DG A + VDSE KVV + R+ S LR E I SG ANNWAMGF S A G F + +R+E ER L S V+ HSLAGGTG+G+GS L Q LR+ PS+ + + VGPF TGD Q YNSAL L L +AD ++YR ND LL GAA+ + R G +G R + L + S +N SL+ D+A FPT P+ PT G R +D +L P AKFVD RS+ SA P +S AG GL A WA G+ V P G + +AA +RG GTG L R WR S + + SQ + T+V N+T + + ++ RAE RAYLHW++R+G+ED+DF AAFEG+R V+ YD L
Sbjct: 6 LHVHIGQCGNQIGEHFWSLAADDFAA----AADNGDAS--------SFSPQYPHPL----------FHEQDGRAAAVFVDSEAKVVDRLRKNSRLASVLRKEACITDSSGRANNWAMGFTSSCKELAQGRGLFYSTVNVLRRELERIDSLQSLVIYHSLAGGTGAGVGSALFQYLREACPSVNITTCSVGPFSTGDCATQWYNSALTLNALSEHADTILYRDNDQLLGEYLRVAGAAQGTGRR------------------------GMSGGRGLALATSK---------------------ASMGRLNESLAADLACLLFPTVT-----SPSIPTCGGG-------------------GYRAWDALALQHDCTPFKYAKFVDNRSSWSASAASTLPTSSVPFKAAAGHGLHHVPDGRLGGAGGGQWADECVYVGKDVIASFPTEDGRGKANVTLAAQMTVRGVDL--PGTGPHVPGQEQVSLSEHPRGKGGPQKSGQCRNSNRNHQKPQTSNPYLPPTPWHPGLTAFLHHDLPRALRLPSWRQGSAIGTVFSSHSQPSILPCTSVPAARPFSSSSPGVAICANRTHMSSTVEKILGRAEEMAEHRAYLHWFHRYGIEDDDFTAAFEGLRRVKEEYDEL 551
BLAST of mRNA_Ecto-sp6_S_contig9.18202.1 vs. uniprot
Match: A0A8K1FBW7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FBW7_PYTOL) HSP 1 Score: 156 bits (394), Expect = 4.710e-37 Identity = 164/662 (24.77%), Postives = 245/662 (37.01%), Query Frame = 2
Query: 38 IHLHLGQAGIQLGESFWRLAEEEFLVDDVRAGGGGDGSYSGRGSGRATQPSRKPPMRRMRPRGTAMFHEDDGWARCLVVDSEPKVVQGF--------QGRVESLRPENAIYSQSGLANNWAMGFASCRH-----------------------------GSAGEEGPFSRCMEGMRKEAERSCWLNSAVMTHSLAGGTGSGLGSGLLQALRDEYPSLYLISACVGPF-GTGDTPLQHYNSALALQHLQAYADCVIYRGNDDLLRGAAEASARISAGTSSPAASDSRWAASGGPRSGGGAAGWRPVGLLSRHGGSXXXXXXXXXXXSGRGRMVVSTADMNASLSLDMASYFFPTSRPFDRFQPAPPTVEGRPRSHQQXXXXXXXXXXXEMAQRPFDGGSLMAAAVPLPAAKFVDLRSTLSARPLASDSGGAGQGLFSSSSLPPSSATKKDWAALANDHGRKVPLCPRRAGGLDDDACVAAHHLIRGAT--FGAAGTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGEALRRHHE---CQEWRTASDVSCAPALRSQGVL-------------RSVTTVCNQTRIRGVLGDVVKRAEGKFRARAYLHWYYRHGLEDEDFLAAFEGVRTVERGYDGL 1855
I +H+GQ G Q+G++FWRL E V + A S + RA + P + R + ++H G ARC++VD+EPKV++ G P + + QSG NNWAMG+ H + ++ ME ++KE E V+ HSL GGTGSGLG +L+ +RD YP YL + + P +GDTPLQ+YN+ L HLQ YADCVIY+ NDDLLR A+ W+ + S+ S + S ++NA + D+A Y FP + RS Q +PFD G L+++ PLP+AKFVD+R+ + + AT++ + + D PL G +D AA L++ T F + T AG L Q+ +A + + S+G+ SV+ N +R + + R +F+A+AY+HWY +HGLE+ DF AF+ + + YD L
Sbjct: 3 IFVHVGQCGNQVGDAFWRLTES---VYEAPATSTASLSAKQAAASRARRKETPPTLYREQ-----LYHPQSGKARCILVDTEPKVIRSMLEARQHKATGSGSVFVPAHVHFEQSGRGNNWAMGYNLQTHRHNVLPSKSDASSMVPLTGTHKTKRVVIESRSAKQELLEMVMESLQKEIEGLDCYQGVVLMHSLGGGTGSGLGCRVLETIRDTYPRSYLTTVSIAPSCASGDTPLQNYNALFTLGHLQEYADCVIYKENDDLLRTASY---------------------------------WKTLRDQSQSNASPGREMGEEGLTKAK---KTSLQELNALAAADVAGYLFPIVA----------STSAGSRSIQMA--------------KPFDAGKLVSSCCPLPSAKFVDIRTGI---------------------VCDRQATQRKPSVGSVD-----PLFHTVIGRTNDTLDAAARRLLQQTTQSFPRSST-------------------------------------------MLPCLATSAMVRGFAGSDLTEKGTQALSQQLASAFPRAAWTRISSEGITYSSYSPFGPYSGKASVSICVNNGHVRSSVRHFLDRGRRQFQAKAYVHWYTQHGLEEADFERAFDQGTKIVQEYDAL 527
BLAST of mRNA_Ecto-sp6_S_contig9.18202.1 vs. uniprot
Match: A0A7S0LEV1_9EUKA (Tubulin delta chain (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LEV1_9EUKA) HSP 1 Score: 146 bits (368), Expect = 1.530e-36 Identity = 90/224 (40.18%), Postives = 120/224 (53.57%), Query Frame = 2
Query: 26 TMSCIHLHLGQAGIQLGESFWRLAEEEFLVDDVRAGGGGDGSYSGRGSGRATQPSRKPPMRRMRPRGTAMFHEDDGWARCLVVDSEPKVVQGFQGR--VESLRPENAIYSQSGLANNWAMGFASCRHGSA--GEEGPFSRCMEGMRKEAERSCWLNSAVMTHSLAGGTGSGLGSGLLQALRDEYPSLYLISACVGPFGTGDTPLQHYNSALALQHLQAYADCVI 685
TM+ ++LH+GQAG ++G +FW LA +E P RR MF +D G + + +DSEPKVV+G VE + A+ QSG NNWAMGF HG++ G +E +R + ER W + A + HSL GGTGSGLGS LLQALRD +P YL S CVGPF G+ PL YN+ L+L +LQ +AD ++
Sbjct: 25 TMATVYLHVGQAGNEIGGAFWTLAAQE------------------------------PATRRW------MF-DDRGRCKAVFLDSEPKVVRGVANSIGVERIERHCALIDQSGRGNNWAMGF----HGTSEVGGSRVADAALEALRWQWERCDWCSGATLCHSLGGGTGSGLGSLLLQALRDAHPRHYLTSVCVGPFALGELPLSAYNATLSLSYLQEFADALV 207
BLAST of mRNA_Ecto-sp6_S_contig9.18202.1 vs. uniprot
Match: V9FMD9_PHYPR (Tubulin domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=V9FMD9_PHYPR) HSP 1 Score: 154 bits (388), Expect = 2.450e-36 Identity = 99/245 (40.41%), Postives = 132/245 (53.88%), Query Frame = 2
Query: 38 IHLHLGQAGIQLGESFWRLAEEEFLVDDVRAGGGGDG--SYSGRGSGRATQPSRKPPMRRMRPRGTAMFHEDDGWARCLVVDSEPKVVQGFQGRVE----SLRPENAIYSQSGLANNWAMGFASCRHGSAG----------EEGPFSRCMEGMRKEAER-SCWLNSAVMTHSLAGGTGSGLGSGLLQALRDEYPSLYLISACVGPFGT-GDTPLQHYNSALALQHLQAYADCVIYRGNDDLLRGA 718
+HLH+GQ G QLG ++WRLA + D + G G + R SG +T PR +FH G ARC++VDSEPKVV+ F + P + Q+G NNWAMG+ R S M+ +++E ER C+ S VM HSL GGTGSGLG +L+++RD YP Y+++ V P T GDTPLQ+YN+ L L+ LQ AD VIY+ ND+LLR A
Sbjct: 3 VHLHVGQCGNQLGAAYWRLAAASGEIHDDKRSQGNTGVSRHLRRASGGSTSTLNGSKKAVSLPR--PLFHPSTGAARCILVDSEPKVVRSFMQETTDGATAFEPAHTHVEQTGRGNNWAMGYYGPRLKSPAPTFTSLAVDDRRELVELVMDSLQREIERVDCYQGSVVM-HSLGGGTGSGLGCRVLESMRDTYPKAYILTTSVAPSCTSGDTPLQNYNAILTLKCLQDVADAVIYKDNDELLRTA 244
BLAST of mRNA_Ecto-sp6_S_contig9.18202.1 vs. uniprot
Match: A0A0M0KBU0_9EUKA (Cryptic tubulin n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0KBU0_9EUKA) HSP 1 Score: 151 bits (381), Expect = 3.880e-36 Identity = 96/233 (41.20%), Postives = 119/233 (51.07%), Query Frame = 2
Query: 29 MSCIHLHLGQAGIQLGESFWRLAEEEFLVDDVRAGGGGDGSYSGRGSGRATQPSRKPPMRRMRPRGTAMFHEDDGWARCLVVDSEPKVVQGFQGRVESLRPEN-----AIYSQSGLANNWAMGFASCRHGSAGEEGPFSRCMEGMRKEAERSCWLNSAVMTHSLAGGTGSGLGSGLLQALRDEYPSLYLISACVGPFGTGDTPLQHYNSALALQHLQAYADCVIYRGNDDLLR 712
MS I +H GQAG ++G WRLA E KPP R F ++ G AR + VD+EPKVV+G V SL PE A+ QSG NNWAMG+ G G G +E +R + ER W V++HS+ GGTGSGLGS LLQ LRDE+P YL +A + PF G+ PL HYN+ LAL LQ +AD +I N LLR
Sbjct: 1 MSTIFVHCGQAGNEIGGVVWRLAWAE-----------------------------KPPRR--------WFFDERGTARAVFVDTEPKVVRGV---VRSLGPERVHPRCALVEQSGRGNNWAMGYGGVDGG--GRNGIADAALEALRWQWERCDWCTGVVLSHSIGGGTGSGLGSLLLQELRDEHPRHYLTAAAMCPFAAGELPLGHYNATLALSFLQEFADAIILFDNTQLLR 191
BLAST of mRNA_Ecto-sp6_S_contig9.18202.1 vs. uniprot
Match: A0A329SNZ5_9STRA (Tubulin domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SNZ5_9STRA) HSP 1 Score: 150 bits (379), Expect = 3.660e-35 Identity = 102/246 (41.46%), Postives = 132/246 (53.66%), Query Frame = 2
Query: 38 IHLHLGQAGIQLGESFWRLAEEEFLVDDVRAGGGGDGSYSG--RGSGRATQPSRKPPMRRMRPRGTAMFHEDDGWARCLVVDSEPKVVQG-----FQGRVESLRPENAIYSQSGLANNWAMGFASCRHGSA----------GEEGPFSRCMEGMRKEAER-SCWLNSAVMTHSLAGGTGSGLGSGLLQALRDEYPSLYLISACVGPFGT-GDTPLQHYNSALALQHLQAYADCVIYRGNDDLLRGA 718
+HLH+GQ G QLG ++WRLA + D G G+ R SG +T + PR +FH G ARC++VDSEPKV++ G V L P A Q+G NNWAMG+ R S M+ +R E E C+ S VM HSL GGTGSGLG +L+++RD YP Y+++A V P T GDTPLQ+YN+ L L+ LQ AD VIY+ ND+LLR A
Sbjct: 3 VHLHVGQCGNQLGAAYWRLAASSGEIQDGNRNRGDTGASRPLRRASGGSTAAIKGAKEAVSLPR--QLFHPSTGAARCILVDSEPKVIRAVCHEVIDGAVACL-PAYAHVEQAGRGNNWAMGYYGPRLKSPTPAFTSLAVDDHRELVELVMDSLRHEIEGVDCYQGSVVM-HSLGGGTGSGLGCRVLESMRDTYPKAYIVTASVAPSCTRGDTPLQNYNAVLTLKCLQDVADAVIYKDNDELLRTA 244
BLAST of mRNA_Ecto-sp6_S_contig9.18202.1 vs. uniprot
Match: A0A7S2GRB2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GRB2_9STRA) HSP 1 Score: 145 bits (366), Expect = 4.490e-35 Identity = 81/224 (36.16%), Postives = 113/224 (50.45%), Query Frame = 2
Query: 38 IHLHLGQAGIQLGESFWRLAEEEFLVDDVRAGGGGDGSYSGRGSGRATQPSRKPPMRRMRPRGTAMFHEDDGWARCLVVDSEPKVVQGFQGRVESL-RPENAIYSQSGLANNWAMGFASCRHGSAGEEGPFSRCMEGMRKEAERSCWLNSAVMTHSLAGGTGSGLGSGLLQALRDEYPSLYLISACVGPFGTGDTPLQHYNSALALQHLQAYADCVIYRGNDDL 706
I +H+GQ G QL FWRLAEE+ + R +F D ARCL++D+EP+ ++++ RP N I ++ G NN+A G C S G F+ + R+EAER L S ++THS +GGTGS + L+Q LRD YP +L+ VGPFG GD+PLQHYN+ + Q + AD V+Y ND+L
Sbjct: 3 IFVHIGQCGTQLALPFWRLAEEDRVSS--------------------------------RELWNPLFDPGDSAARCLLIDAEPRAAAQTAASLQNVVRPSNIILAREGRGNNFAFGLQQCMSESNQGRGLFAASTDAFRREAERCDSLRSVILTHSTSGGTGSSTSAALMQHLRDIYPRRWLLPVAVGPFGRGDSPLQHYNTLFSTQAMHILADGVVYTDNDEL 194
BLAST of mRNA_Ecto-sp6_S_contig9.18202.1 vs. uniprot
Match: UPI00112E238B (tubulin delta chain-like n=1 Tax=Rhinatrema bivittatum TaxID=194408 RepID=UPI00112E238B) HSP 1 Score: 145 bits (367), Expect = 9.510e-35 Identity = 98/256 (38.28%), Postives = 126/256 (49.22%), Query Frame = 2
Query: 26 TMSCIHLHLGQAGIQLGESFWRLAEEEF-------------------------LVDDVRAGGGGDGSYSGRGSGRATQPSRKPPMRRMRPRGTAMFHEDDGWARCLVVDSEPKVVQGFQGRVES--LRPENAIYSQSGLANNWAMGFASCRHGSAGEEGPFSRCMEGMRKEAERSCWLNSAVMTHSLAGGTGSGLGSGLLQALRDEYPSLYLISACVGPFGTGDTPLQHYNSALALQHLQAYADCVIYRGNDDLLR 712
TMS + L LGQ G QLG +W+L E ++ R G S G SG P+R P F DG L VDSEPKV++ Q +++ R N I QSG NNWA G+ S GE R ME +RKE ER + V+ HSL+GGTGSGLG+ L +A+RDEYP Y++S V P G++PLQHYNS L+L LQ YAD ++ ND +L+
Sbjct: 11 TMSAVWLQLGQCGNQLGLEWWQLLTNESAAHQESDRSPFSSSCLSLLRLPRHNILGKGRRGRNCRCSSIGLKSG--GHPARYP------------FFARDGKLSALCVDSEPKVIRKLQKQIKKGVFRDSNLILGQSGRGNNWAYGYHDLH--SEGETSLLQRTMESLRKEVERRDCYSGTVLLHSLSGGTGSGLGARLCEAIRDEYPLGYILSVTVAPHQAGESPLQHYNSLLSLSWLQRYADGILLFHNDSVLK 250
BLAST of mRNA_Ecto-sp6_S_contig9.18202.1 vs. uniprot
Match: UPI001B88C6A1 (tubulin delta chain-like isoform X1 n=2 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88C6A1) HSP 1 Score: 147 bits (370), Expect = 1.010e-34 Identity = 84/229 (36.68%), Postives = 119/229 (51.97%), Query Frame = 2
Query: 29 MSCIHLHLGQAGIQLGESFWRLAEEEFLVDDVRAGGGGDGSYSGRGSGRATQPSRKPPMRRMRPRGTAMFHEDDGWARCLVVDSEPKVVQGFQGRVES-LRPENAIYSQSGLANNWAMGFASCRHGSAGEEGPFSRCMEGMRKEAERSCWLNSAVMTHSLAGGTGSGLGSGLLQALRDEYPSLYLISACVGPFGTGDTPLQHYNSALALQHLQAYADCVIYRGNDDLLR 712
MS + LH+GQ G Q+G SFW++A ++ ++ +A F + + R + VDSEPKVV S +R +N + + G +NWAMG+ + S G++ ++ +R ER V+ HSLAGGTGSGLGS L + LRDEYP YL+S + PF +G++PLQHYNS L L HLQ Y D VI ND++L+
Sbjct: 1 MSTVFLHVGQCGNQVGRSFWKIANQDKKAEN-----------------------------------SATFVDAEKMQRSVHVDSEPKVVHSLIANQRSRVRKKNVLAGKRGRGSNWAMGYYGLQ--SKGDDTLVENTIDAVRHVVERCDSFTGTVVMHSLAGGTGSGLGSRLCECLRDEYPMNYLLSCAIAPFASGESPLQHYNSLLTLSHLQRYCDGVIVSYNDEVLK 192 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18202.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig9.18202.1 >prot_Ecto-sp6_S_contig9.18202.1 ID=prot_Ecto-sp6_S_contig9.18202.1|Name=mRNA_Ecto-sp6_S_contig9.18202.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=627bp MSCIHLHLGQAGIQLGESFWRLAEEEFLVDDVRAGGGGDGSYSGRGSGRAback to top mRNA from alignment at Ecto-sp6_S_contig9:1834570..1839121- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig9.18202.1 ID=mRNA_Ecto-sp6_S_contig9.18202.1|Name=mRNA_Ecto-sp6_S_contig9.18202.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=4552bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:1834570..1839121- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig9:1834570..1839121- >mRNA_Ecto-sp6_S_contig9.18202.1 ID=mRNA_Ecto-sp6_S_contig9.18202.1|Name=mRNA_Ecto-sp6_S_contig9.18202.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1881bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:1834570..1839121- (Ectocarpus species6 EcLAC_371)back to top |