mRNA_Ecto-sp6_S_contig9.18199.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig9.18199.1 vs. uniprot
Match: A0A6H5KMF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMF0_9PHAE) HSP 1 Score: 1188 bits (3074), Expect = 0.000e+0 Identity = 774/890 (86.97%), Postives = 790/890 (88.76%), Query Frame = 1
Query: 2008 MLSVGPLGDDSEALRLEAMAAGGAXXXXXXXXXXXXXSNARSIHAIRCFNAQTDLSALDLLRNGRLGDDXXXXXXXXXXXXXXXXXXXXXXXXGLLDLDSVPVLPFLLSGGFAPDDYNNSSNXXXXXXXXXXXXXXXXXXXXX----------GERVFDLCLTRRERNAEVSQTVEAFRLNRDQARLLWRCATWFRPPGGAGDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRPTEKGGGGMAGEDGAPVVLVHGVFGAGKSLTLVALCVMVDRIATEDARLRPSRGLPPRPKAEQIRVLLASGTNVAVDRVLMGLVSAGFDDIARLGSHRRTHKSLLDRVVHSSPPGRDAQKAVQSELQAMLKTAVGADRDEIGRALQASKAESFTTDQTKRLREARVTGVTCASATVPLLTRPPRSPRPFPRGGVVSGGNGSNGSVAARKTGVATGGAKTAGPWKRPAGVAGSNGRLLGGGRGSTGARGWSXXXXEGGRRGYDIVVLDESSQIVEPMSLLPVAVAQPRRLVLVGDPMQLPPPVARARSTVSAEXXXXXXXXXXXXXXXXXXSQRQMPKDAWLEKANARPGNGDTLEKTLFVRLAKLGVKPLLLGRQYRCHPQMSALASRLFYQGRLTDGVAARDRGPLVPGLAPLTLLDAAGRGAESTAPGGSIKNAFEARAVADVVASLLRAGSXXXXXXXXXXXXXXXVTAANIGVICLYKAQLAQVRRELESASSPTPGAASKPSSSSSPGVGVQPGGEGRDEGQQGGASSVSSCCRDVQVSTVDAFQGAEKDIIIVASTRTERLGFIVSPQRLCVALTRARHHLLVVGEKSVLVTNPLWREVVDASNVVVAPAQMFSYSSXXXXXXXA*EKGQLVARSAD*VGCGESGCWK 4647
MLSVGPLGDDSEALRLEA A GGAXXXXXXXXXXXXXS RSIHAIRCFNAQTDLSALDLLRNGRLGDDXXXXXXXXXXXXXXXXX GLLDLDSVPVL FLLSGG APDD N+S NXXXXXXXXXXXXXXXXXXXXX G+RVFDLCLTR ERNAEVSQTVEAFRLNRDQARLLWRCATWFRP AGDNXXXXXXXXXXXXXXXXXXXXXXXXXXXX GRPTE+GGGGMAGEDGAPVVLVHGVFGAGKSLTLVALCVMVDRIA DARLR SRGLPPRPKAEQ+RVLLASGTNVAVDRVLMGLVSAGFDDIARLGSHRRTHKSLLDRVVHSSPPGRDAQKAVQSELQAMLKTAVGA+RDEIGRALQASKAESFTTDQ KRLREARVTGVTCASATVPLLTRPPRSPRP PRGGVVSGGNGSN SVAARKTGVATGGAKTAGPWKRPAGVAGSNGR LGGGRGS RGWS EG RRGYDIVVLDE SQIVEPMSLLPVAVAQPRRLVLVGDPMQLPPPVARAR MPK+AWLEK NARPGNGDTLEKTLFVRLAKLGV+PLLLGRQYRCHPQMSALASRLFYQGRLTDGVAARDRGPLVPGLAPLTLLDAAGRGAESTAPGGSIKNAFEARAVADVV SLLRAGS XXXXXXXXXXXX V+ A+IG+ICLYKAQLAQVRRELESAS TP A+S PSSSSS VGVQPGG+GRDEGQQGG SSV SCCRDVQVSTVDAFQGAEKDI+IVASTRTERLGF+VSPQRLCVALTRARHHLLVVGEKSVLVTNPLWREVVDASNVVV AQMFS XXXXXXXA EKG+ VARSAD G +SGCWK
Sbjct: 1 MLSVGPLGDDSEALRLEATARGGAXXXXXXXXXXXXXS--RSIHAIRCFNAQTDLSALDLLRNGRLGDDXXXXXXXXXXXXXXXXXNALGRGKGLLDLDSVPVLRFLLSGGLAPDDCNSSGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGDRVFDLCLTRGERNAEVSQTVEAFRLNRDQARLLWRCATWFRPAEAAGDNXXXXXXXXXXXXXXXXXXXXXXXXXXXX--GRPTEEGGGGMAGEDGAPVVLVHGVFGAGKSLTLVALCVMVDRIAAADARLRSSRGLPPRPKAEQVRVLLASGTNVAVDRVLMGLVSAGFDDIARLGSHRRTHKSLLDRVVHSSPPGRDAQKAVQSELQAMLKTAVGAERDEIGRALQASKAESFTTDQAKRLREARVTGVTCASATVPLLTRPPRSPRPLPRGGVVSGGNGSN-SVAARKTGVATGGAKTAGPWKRPAGVAGSNGRRLGGGRGSXXERGWSGGGGEGRRRGYDIVVLDECSQIVEPMSLLPVAVAQPRRLVLVGDPMQLPPPVARAR----------------------------MPKEAWLEKVNARPGNGDTLEKTLFVRLAKLGVQPLLLGRQYRCHPQMSALASRLFYQGRLTDGVAARDRGPLVPGLAPLTLLDAAGRGAESTAPGGSIKNAFEARAVADVVVSLLRAGSSNXXXXXXXXXXXX-VSVASIGIICLYKAQLAQVRRELESASRATPAASSMPSSSSSLDVGVQPGGDGRDEGQQGGGSSVPSCCRDVQVSTVDAFQGAEKDIVIVASTRTERLGFLVSPQRLCVALTRARHHLLVVGEKSVLVTNPLWREVVDASNVVVTLAQMFSXXXXXXXXXXAREKGEPVARSADGAGGEKSGCWK 856
BLAST of mRNA_Ecto-sp6_S_contig9.18199.1 vs. uniprot
Match: D8LH01_ECTSI (Prematurely terminated mRNA decay factor-like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH01_ECTSI) HSP 1 Score: 895 bits (2312), Expect = 9.920e-307 Identity = 608/797 (76.29%), Postives = 618/797 (77.54%), Query Frame = 1
Query: 2008 MLSVGPLGDDSEALRLEAMAAGGAXXXXXXXXXXXXXSNARSIHAIRCFNAQTDLSALDLLRNGRLGDDXXXXXXXXXXXXXXXXXXXXXXXXGLLDLDSVPVLPFLLSGGFAPDDYNNSSNXXXXXXXXXXXXXXXXXXXXXGERVFDLCLTRRERNAEVSQTVEAFRLNRDQARLLWRCATWFRPPGGAGDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRPTEKGGGGMAGEDGAPVVLVHGVFGAGKSLTLVALCVMVDRIATEDARLRPSRGLPPRPKAEQIRVLLASGTNVAVDRVLMGLVSAGFDDIARLGSHRRTHKSLLDRVVHSSPPGRDAQKAVQSELQAMLKTAVGADRDEIGRALQASKAESFTTDQTKRLREARVTGVTCASATVPLLTRPPRSPRPFPRGGVVSGGNGSNGSVAARKTGVATGGAKTAGPWKRPAGVAGSNGRLLGGGRGSTGARGWSXXXXEGGRRGYDIVVLDESSQIVEPMSLLPVAVAQPRRLVLVGDPMQLPPPVARARSTVSAEXXXXXXXXXXXXXXXXXXSQRQMPKDAWLEKANARPGNGDTLEKTLFVRLAKLGVKPLLLGRQYRCHPQMSALASRLFYQGRLTDGVAARDRGPLVPGLAPLTLLDAAGRGAESTAPGGSIKNAFEARAVADVVASLLRAGSXXXXXXXXXXXXXXXVTAANIGVICLYKAQLAQVRRELESASSPTPGAASKPSSSSSPGVGVQPGGEGRDEGQQGGASSVSSCCRDVQVSTVDAFQGAEKDIIIVASTRTERLGFIV 4398
MLSVGPLGDDSEALRLEAMA GG XXXXXXXXXXXXX NARSIHAIRCFNAQT LSA+DLLRNGRLGDD XXXXX ++ PV + G AP A V+ + L R XXXXXXXXXX R E+GG E AP + + VALCVMVDRIATEDARLRPSRGLPPRPKAEQIRVLLASGTNVAVDRVLMGLVSAGFDDIARLGSHRRTHKSLLDRVVHSSPPGRDAQKAVQSELQAMLKTAVGADRDEIGRALQASKAESFTTDQTKRLREARVTGVTCASATVPLLTRPPRSPRP PRGGVVSGGNGSNGSVAARKTGVATGG KTAGPWKRPAGVAGSNGRLLGGGRGS GARGWSXXXX GGRRGYDIVVLDESSQIVEPMSLLPVAVAQPRRLVLVGDPMQLPPPVARARSTVSAEXXXXXXXXXXXXXXXXXXSQRQMPKDAWLEKANARPGNGDTLEKTLFVRLAKLGVKPLLLGRQYRCHPQMSALASRLFYQGRLTDGVAARDRGPLV GLAPLTLLDAAGRGAESTAPGGSIKNAFEARAVADVVASLLRAGSXXXXXXXXXXXX KAQLAQVRRELESAS TPGAAS PSSSSSP GVQPGGEGRDEGQQGGASSVSSCCRDVQVSTVDAFQGAEKDI+IVASTRTERLGFIV
Sbjct: 1 MLSVGPLGDDSEALRLEAMA-GGXXXXXXXXXXXXXXXNARSIHAIRCFNAQTHLSAVDLLRNGRLGDDDGXXXXXGKALATATG-----------STETRPVFSGAVRPGSAP------------------------------------------LRAPVTMATTEXXXXXXXVQELER------------------------------ETXXXXXXXXXXAVRRRREEGG---WQERTAPRLFSC-------TACSVALCVMVDRIATEDARLRPSRGLPPRPKAEQIRVLLASGTNVAVDRVLMGLVSAGFDDIARLGSHRRTHKSLLDRVVHSSPPGRDAQKAVQSELQAMLKTAVGADRDEIGRALQASKAESFTTDQTKRLREARVTGVTCASATVPLLTRPPRSPRPLPRGGVVSGGNGSNGSVAARKTGVATGGTKTAGPWKRPAGVAGSNGRLLGGGRGSAGARGWSXXXXXGGRRGYDIVVLDESSQIVEPMSLLPVAVAQPRRLVLVGDPMQLPPPVARARSTVSAEXXXXXXXXXXXXXXXXXXSQRQMPKDAWLEKANARPGNGDTLEKTLFVRLAKLGVKPLLLGRQYRCHPQMSALASRLFYQGRLTDGVAARDRGPLVSGLAPLTLLDAAGRGAESTAPGGSIKNAFEARAVADVVASLLRAGSXXXXXXXXXXXXD--------------KAQLAQVRRELESASCATPGAASIPSSSSSPDDGVQPGGEGRDEGQQGGASSVSSCCRDVQVSTVDAFQGAEKDIVIVASTRTERLGFIV 689
BLAST of mRNA_Ecto-sp6_S_contig9.18199.1 vs. uniprot
Match: D8LH00_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH00_ECTSI) HSP 1 Score: 208 bits (530), Expect = 8.520e-59 Identity = 126/136 (92.65%), Postives = 127/136 (93.38%), Query Frame = 3
Query: 1338 MGTERLRGRGGLPPCLFSRHAGGDATDARRGRSDALRESQGKPRNHREFRXXXXXXXX----QGRGASRSNGPTGPSLAAEAVPPRRHPVLLQRLFISGWRRXXXXXXXXXXWEQEQWMGQPVGREASTAMAGATG 1733
MGTERLRGRGGLPPCLFSRHAGGDATDARRGRSDALRESQGKPRNHREFRXXXXXXXX QGRGASRSNGPTGPSLAAEAVPPRRHPVLLQRLF+SGWRRXXXXXXX QEQWMGQPVGREASTAMAGATG
Sbjct: 1 MGTERLRGRGGLPPCLFSRHAGGDATDARRGRSDALRESQGKPRNHREFRXXXXXXXXXXXXQGRGASRSNGPTGPSLAAEAVPPRRHPVLLQRLFVSGWRRXXXXXXX-----QEQWMGQPVGREASTAMAGATG 131
BLAST of mRNA_Ecto-sp6_S_contig9.18199.1 vs. uniprot
Match: A0A091D5Q9_FUKDA (Uncharacterized protein n=2 Tax=Fukomys damarensis TaxID=885580 RepID=A0A091D5Q9_FUKDA) HSP 1 Score: 206 bits (524), Expect = 1.140e-53 Identity = 183/592 (30.91%), Postives = 257/592 (43.41%), Query Frame = 1
Query: 2731 PVVLVHGVFGAGKSLTLVALCVMVDRIATEDARLRPSRGLPPRPKAEQIRVLLASGTNVAVDRVLMGLVSAGFDDIARLGSHRRTHKSLLDRVVHSSPPGRDAQKAVQSELQAMLKTAVG-ADRDEIGRALQASKAESFTTDQTKRLREARVTGVTCASATVPLLTRPPRSPRPFPRGGVVSGGNGSNGSVAARKTGVATGGAKTAGPWKRPAGVAGSNGRLLGGGRGSTGARGWSXXXXEGGRRGYDIVVLDESSQIVEPMSLLPVAVAQPRRLVLVGDPMQLPPPVARARSTVSAEXXXXXXXXXXXXXXXXXXSQRQMPKDAWLEKANARPGNGDTLEKTLFVRLAKLGVKPLLLGRQYRCHPQMSALASRLFYQGRLTDGVAARDRGPLVPGLAPLTLLDAAGRGAESTAPGGSIKNAFEARAVADVVASLLRAGSXXXXXXXXXXXXXXXVTAANIGVICLYKAQLAQVRRELESASSPTPGAASKPSSSSSPGVGVQPGGEGRDEGQQGGASSVSSCCRDVQVSTVDAFQGAEKDIIIVASTRTERLGFIVSPQRLCVALTRARHHLLVVGEKSVLVTNPLWREVV 4503
PV ++ GVFGAGKS L + ++ R+ + P ++L++S TNVAVDRVL+GL+S GF+ R+GS R+ K +L +H+ G + + ELQA++K + A+R + R+++ K + T LRE RV GVTCA+ +P + NG + +VVLDE SQ+ EP SLLP+A + +L+LVGDP QLPP + + + A NG LE+TLF RL +G +P+ L QYRCHP +SA+A+ LFY G L DGV+ +RGPLVP L L + G+ E S N EA ++ SL+ +G + + IGVI LYK+Q+ ++ R L +A P + VQVSTVDAFQGAEK+III++ RT +GFI S R+ VALTR R HLL+VG + L N LW V+
Sbjct: 11 PVTVIRGVFGAGKSYLLAVVVLLFVRLFEQSDTAAVGNVQP-------WKLLISSSTNVAVDRVLLGLLSLGFEKFVRVGSIRKIAKPILPYSLHA---GSENENEQLKELQALMKEDLTPAERVCVRRSIEQHKLGTTRT----LLREVRVVGVTCAACWLPCM----------------------NGLT-------------------------------------------------------FPVVVLDECSQMTEPTSLLPIARFECEKLILVGDPKQLPPTI---------------------------------------QGSEAAHENG--LEQTLFDRLCLMGHEPVPLRTQYRCHPAISAIANDLFYGGDLRDGVSEVERGPLVPWLPTLCFYNVTGQ--EQIERDNSFHNVAEASFTLKLIQSLIASG----------------IAGSMIGVITLYKSQMYKLCRSLSAADFSHPD------------------------------------LKTVQVSTVDAFQGAEKEIIILSCVRTRHVGFIDSETRVNVALTRGRRHLLIVGNLACLRRNGLWGRVI 416
BLAST of mRNA_Ecto-sp6_S_contig9.18199.1 vs. uniprot
Match: A0A7L3DCX7_PLUSO (ZGRF1 protein (Fragment) n=2 Tax=Charadriiformes TaxID=8906 RepID=A0A7L3DCX7_PLUSO) HSP 1 Score: 214 bits (545), Expect = 1.320e-53 Identity = 179/593 (30.19%), Postives = 258/593 (43.51%), Query Frame = 1
Query: 2731 PVVLVHGVFGAGKSLTL-VALCVMVDRIATEDARLRPSRGLPPRPKAEQIRVLLASGTNVAVDRVLMGLVSAGFDDIARLGSHRRTHKSLLDRVVHSSPPGRDAQKAVQSELQAMLKTAVG-ADRDEIGRALQASKAESFTTDQTKRLREARVTGVTCASATVPLLTRPPRSPRPFPRGGVVSGGNGSNGSVAARKTGVATGGAKTAGPWKRPAGVAGSNGRLLGGGRGSTGARGWSXXXXEGGRRGYDIVVLDESSQIVEPMSLLPVAVAQPRRLVLVGDPMQLPPPVARARSTVSAEXXXXXXXXXXXXXXXXXXSQRQMPKDAWLEKANARPGNGDTLEKTLFVRLAKLGVKPLLLGRQYRCHPQMSALASRLFYQGRLTDGVAARDRGPLVPGLAPLTLLDAAGRGAESTAPGGSIKNAFEARAVADVVASLLRAGSXXXXXXXXXXXXXXXVTAANIGVICLYKAQLAQVRRELESASSPTPGAASKPSSSSSPGVGVQPGGEGRDEGQQGGASSVSSCCRDVQVSTVDAFQGAEKDIIIVASTRTERLGFIVSPQRLCVALTRARHHLLVVGEKSVLVTNPLWREVV 4503
PV ++HGVFGAGKS L V + +V + +A P+ ++L+AS TNVAVDR+L+GL+ GF+D R+GS R+ +++L +H+ + Q EL A++K + ++ + ++++ K + T L++ +V G TCA+ P L FP +V+LDE SQ+ EP SLLP+A Q +LVLVGDP QLPP V + S +G LE+TLF RL +G KP+LL QYRCHP +SA+A+ LFY+G+L DGVA RDR PL+ L L G E T S N EA ++ +L+ +G + + +GV+ LYK+Q+ ++R L GG S + R VQVSTVDAFQGAEK+II+++ RT + GFI + +R+ VALTRA+ HLL+VG + L N LW V+
Sbjct: 381 PVTIIHGVFGAGKSYLLSVVVLFLVQLFESSEATEGPTAPW---------KLLIASSTNVAVDRILLGLLDLGFEDFIRVGSIRKITRAILPYSLHAGSGNENEQL---KELLALMKEDLTPVEKTYVRKSIEQHKLGTNKTI----LQQVKVVGATCAACPFPCLNN-----LKFP------------------------------------------------------------------------VVMLDECSQMTEPASLLPIARFQCEKLVLVGDPKQLPPTVQGSESA-----------------------------------------HGQGLERTLFDRLCLMGHKPILLRTQYRCHPAISAIANELFYEGQLVDGVAERDRSPLLDWLPTLCFYSV--NGVEQTEGDNSFYNPAEAHFTVQLIQALIASG----------------IEGSAVGVVTLYKSQMCKIRNLL------------------------------------GGVRSAALETRAVQVSTVDAFQGAEKEIIVLSCVRTRQTGFIDAERRMNVALTRAKRHLLIVGNLACLSKNRLWGRVI 785
BLAST of mRNA_Ecto-sp6_S_contig9.18199.1 vs. uniprot
Match: A0A7D9ESK8_PARCT (ZGRF1 isoform X2 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9ESK8_PARCT) HSP 1 Score: 212 bits (540), Expect = 3.460e-53 Identity = 183/597 (30.65%), Postives = 264/597 (44.22%), Query Frame = 1
Query: 2731 PVVLVHGVFGAGKSLTLVALCVMVDRI-----ATEDARLRPSRGLPPRPKAEQIRVLLASGTNVAVDRVLMGLVSAGFDDIARLGSHRRTHKSLLDRVVHSSPPGRDAQKAVQSELQAMLKTAV-GADRDEIGRALQASKAESFTTDQTKRLREARVTGVTCASATVPLLTRPPRSPRPFPRGGVVSGGNGSNGSVAARKTGVATGGAKTAGPWKRPAGVAGSNGRLLGGGRGSTGARGWSXXXXEGGRRGYDIVVLDESSQIVEPMSLLPVAVAQPRRLVLVGDPMQLPPPVARARSTVSAEXXXXXXXXXXXXXXXXXXSQRQMPKDAWLEKANARPGNGDTLEKTLFVRLAKLGVKPLLLGRQYRCHPQMSALASRLFYQGRLTDGVAARDRGPLVPGLAPLTLLDAAGRGAESTAPGGSIKNAFEARAVADVVASLLRAGSXXXXXXXXXXXXXXXVTAANIGVICLYKAQLAQVRRELESASSPTPGAASKPSSSSSPGVGVQPGGEGRDEGQQGGASSVSSCCRDVQVSTVDAFQGAEKDIIIVASTRTERLGFIVSPQRLCVALTRARHHLLVVGEKSVLVTNPLWREVV 4503
P+ L+HGVFGAGKS L + +++ R+ A+++AR RP ++L++S TNVAVDR+L+GL+ GFD R+GS R+ K +L +HS+ G + Q+ ELQ MLKT + +++ + ++++ K + KRL RV GVTCA+ T L R FP +++LDE SQ+ EP SLLP+A R+LVLVGDP QL P + + P + LE+TLF RL K+ +KP+LL +QYRCHP +S+L++RLFY RL DGV A +R PLV + L + + G E + GS N+ EA+ V ++ SLL + V IGVI YK+QL + L + GG S +Q+STVDAFQG EKD+II++ RT+ +GFI +R VALTRA+ HL +VG +L +N LW +++
Sbjct: 179 PITLIHGVFGAGKSFLLAVVVLLMVRLFEIADASDEARTRPITW----------KILISSTTNVAVDRILLGLLDLGFDQFVRVGSVRKIAKPVLPFSIHST--GTELQEL--KELQGMLKTELTSSEKAYVRKSIEMHKLG----ENRKRLANVRVVGVTCAACTFAALER-----LKFP------------------------------------------------------------------------VLLLDECSQMTEPTSLLPMARFGCRKLVLVGDPKQLNPTIQ-----------------------------------------GSEPSHESGLEQTLFDRLIKMDLKPILLRKQYRCHPVISSLSNRLFYNDRLLDGVNAEEREPLVDFVPTLCFYNVS-NGREECSQDGSYFNSAEAKFVVVLIKSLLES----------------EVEPKQIGVITQYKSQLTTITSSLSA---------------------------------DGGTSHKEWA--GIQISTVDAFQGGEKDVIILSCVRTKHIGFIDCERRTNVALTRAKRHLCIVGCGKILSSNSLWSKIL 587
BLAST of mRNA_Ecto-sp6_S_contig9.18199.1 vs. uniprot
Match: UPI00138FBF77 (uncharacterized protein LOC116608366 n=1 Tax=Nematostella vectensis TaxID=45351 RepID=UPI00138FBF77) HSP 1 Score: 217 bits (552), Expect = 7.660e-53 Identity = 188/593 (31.70%), Postives = 264/593 (44.52%), Query Frame = 1
Query: 2731 PVVLVHGVFGAGKSLTLVALCV-MVDRIATEDARLRPSRGLPPRPKAEQIRVLLASGTNVAVDRVLMGLVSAGFDDIARLGSHRRTHKSLLDRVVHSSPPGRDAQKAVQSELQAMLKTAVG-ADRDEIGRALQASKAESFTTDQTKRLREARVTGVTCASATVPLLTRPPRSPRPFPRGGVVSGGNGSNGSVAARKTGVATGGAKTAGPWKRPAGVAGSNGRLLGGGRGSTGARGWSXXXXEGGRRGYDIVVLDESSQIVEPMSLLPVAVAQPRRLVLVGDPMQLPPPVARARSTVSAEXXXXXXXXXXXXXXXXXXSQRQMPKDAWLEKANARPGNGDTLEKTLFVRLAKLGVKPLLLGRQYRCHPQMSALASRLFYQGRLTDGVAARDRGPLVPGLAPLTLLDAAGRGAESTAPGGSIKNAFEARAVADVVASLLRAGSXXXXXXXXXXXXXXXVTAANIGVICLYKAQLAQVRRELESASSPTPGAASKPSSSSSPGVGVQPGGEGRDEGQQGGASSVSSCCRDVQVSTVDAFQGAEKDIIIVASTRTERLGFIVSPQRLCVALTRARHHLLVVGEKSVLVTNPLWREVV 4503
P+ L+HGVFG+GKS L + V +++ D+ + P ++L++S TNVAVDR+L+GL+ G+D+ R+GS R+ KS+L VHS+ G D Q+ ELQAMLK V +R I ++++ K KRL EA+V GVTCA+ P + + FP I++LDE SQ+ EP SLLP+A + ++L+LVGDP QL P + + P + LE+TLF RL KLG P +L QYRCHP +SA+A++LFY G+L DGV + +R P+V AP RG E GS N EA+ V ++ LL AG V A IGVI LYK+QL + L AASK S+ S + VQ+STVDAFQG EKD+++++ RT+R+GFI +R VALTRA+ HLL++G +L +N +W V+
Sbjct: 2013 PITLIHGVFGSGKSYLLAVIIVFLLEVFKMCDSNAERASSTP-------WKILVSSTTNVAVDRILIGLLDLGYDEFVRVGSVRKIAKSVLPYSVHSA--GSDTQEL--KELQAMLKGDVSPTERTLIRKSIEKQKLGI----NKKRLVEAQVVGVTCAACVFPCMEK-----MKFP------------------------------------------------------------------------ILLLDECSQMTEPSSLLPLARFECQKLLLVGDPKQLSPTIQ-----------------------------------------GSEPEHDKGLEQTLFDRLIKLGYHPTMLRVQYRCHPVISAIANKLFYDGQLKDGVTSEERSPIVD-FAPTLCFYNVSRGQEKHGQDGSYYNEEEAKFVVFMIDRLLEAG----------------VEPAQIGVITLYKSQLRTITTHL---------AASK--------------------------SASHSEMKGVQISTVDAFQGGEKDVVLLSCVRTKRVGFIDCDRRTNVALTRAKRHLLIIGSLRMLSSNAVWGNVI 2420
BLAST of mRNA_Ecto-sp6_S_contig9.18199.1 vs. uniprot
Match: UPI0003315615 (protein ZGRF1 n=1 Tax=Sorex araneus TaxID=42254 RepID=UPI0003315615) HSP 1 Score: 215 bits (548), Expect = 1.870e-52 Identity = 190/592 (32.09%), Postives = 263/592 (44.43%), Query Frame = 1
Query: 2731 PVVLVHGVFGAGKSLTLVALCVMVDRIATEDARLRPSRGLPPRPKAEQIRVLLASGTNVAVDRVLMGLVSAGFDDIARLGSHRRTHKSLLDRVVHSSPPGRDAQKAVQSELQAMLKTAVG-ADRDEIGRALQASKAESFTTDQTKRLREARVTGVTCASATVPLLTRPPRSPRPFPRGGVVSGGNGSNGSVAARKTGVATGGAKTAGPWKRPAGVAGSNGRLLGGGRGSTGARGWSXXXXEGGRRGYDIVVLDESSQIVEPMSLLPVAVAQPRRLVLVGDPMQLPPPVARARSTVSAEXXXXXXXXXXXXXXXXXXSQRQMPKDAWLEKANARPGNGDTLEKTLFVRLAKLGVKPLLLGRQYRCHPQMSALASRLFYQGRLTDGVAARDRGPLVPGLAPLTLLDAAGRGAESTAPGGSIKNAFEARAVADVVASLLRAGSXXXXXXXXXXXXXXXVTAANIGVICLYKAQLAQVRRELESASSPTPGAASKPSSSSSPGVGVQPGGEGRDEGQQGGASSVSSCCRDVQVSTVDAFQGAEKDIIIVASTRTERLGFIVSPQRLCVALTRARHHLLVVGEKSVLVTNPLWREVV 4503
P+ ++HGVFGAGKS L+AL V+ E + P P +VL++S TNVAVDRVL+GL+S GF+ R+GS R+ K +L +H+ G ++ ELQA+L+ + A+R + R+L+ K + K LR+ RV GVTCA+ P L + FP +VVLDE SQI EP SLLP+A + +L+LVGDP QLPP + + ++A NG LE+TLF RL +G +P+LL QYRCHP +SA+ + LFY+GRL DGV+A +RGPL+ L L + RG E S N EA ++ +LL G V + IGVI LYK+Q+ ++ + L +++ P R VQVSTVDAFQGAEK++II++ RT +GFI S +R+ VALTR R HLL+VG + L N LW V+
Sbjct: 1492 PITIIHGVFGAGKSY-LLALVVLFFVQLFEQSEAAPLGDARP------WKVLISSSTNVAVDRVLLGLLSLGFEKFVRVGSIRKIAKPILPYSLHA---GSESDSEQLQELQALLRADLSPAERVYVRRSLEQHKLGT----NRKLLRQVRVVGVTCAACPFPCL-----NDLKFP------------------------------------------------------------------------VVVLDECSQITEPASLLPIARFECEKLILVGDPKQLPPTI---------------------------------------QGSDAAHENG--LEQTLFDRLCLMGHEPVLLRTQYRCHPAISAIVNDLFYEGRLLDGVSAAERGPLLAWLPTLCFYNV--RGLEQMEGDNSFHNVAEAAFTLKLIQALLAGG----------------VAGSVIGVITLYKSQMYKLCQALSASNVDHPD------------------------------------LRAVQVSTVDAFQGAEKEVIILSCVRTRNVGFIDSGRRMNVALTRGRRHLLIVGSLACLRENRLWGRVI 1897
BLAST of mRNA_Ecto-sp6_S_contig9.18199.1 vs. uniprot
Match: A0A7L3FAI1_9GRUI (ZGRF1 protein (Fragment) n=1 Tax=Zapornia atra TaxID=2585822 RepID=A0A7L3FAI1_9GRUI) HSP 1 Score: 210 bits (534), Expect = 3.050e-52 Identity = 181/593 (30.52%), Postives = 257/593 (43.34%), Query Frame = 1
Query: 2731 PVVLVHGVFGAGKSLTL-VALCVMVDRIATEDARLRPSRGLPPRPKAEQIRVLLASGTNVAVDRVLMGLVSAGFDDIARLGSHRRTHKSLLDRVVHSSPPGRDAQKAVQSELQAMLKTAVG-ADRDEIGRALQASKAESFTTDQTKRLREARVTGVTCASATVPLLTRPPRSPRPFPRGGVVSGGNGSNGSVAARKTGVATGGAKTAGPWKRPAGVAGSNGRLLGGGRGSTGARGWSXXXXEGGRRGYDIVVLDESSQIVEPMSLLPVAVAQPRRLVLVGDPMQLPPPVARARSTVSAEXXXXXXXXXXXXXXXXXXSQRQMPKDAWLEKANARPGNGDTLEKTLFVRLAKLGVKPLLLGRQYRCHPQMSALASRLFYQGRLTDGVAARDRGPLVPGLAPLTLLDAAGRGAESTAPGGSIKNAFEARAVADVVASLLRAGSXXXXXXXXXXXXXXXVTAANIGVICLYKAQLAQVRRELESASSPTPGAASKPSSSSSPGVGVQPGGEGRDEGQQGGASSVSSCCRDVQVSTVDAFQGAEKDIIIVASTRTERLGFIVSPQRLCVALTRARHHLLVVGEKSVLVTNPLWREVV 4503
P+ ++ GVFGAGKS L V + +V+ +A P + ++L+AS TNVAVDR+L+GL+ GF+D R+GS R+ K++L +H+ G Q EL A+LK + A++ + ++++ K + T L++ +V G TCA+ P L A K + +V+LDE SQ+ EP SLLP+A Q +LVLVGDP QLPP + + S + LE+TLF RL +G KP+LL QYRCHP +SA+A+ LFY+G+L DGV+ DR PL+ L L G E T S N EA ++ SL+ +G + + IGVI LYKAQ+ +V+ L S S + R VQVSTVDAFQGAEK+II+++ RT ++GFI S +R+ VALTRA+ HLL+VG + L N LW V+
Sbjct: 381 PIAIIRGVFGAGKSYLLSVVVLFLVELFGIGEATENP--------RPAPWKLLVASSTNVAVDRILLGLLDLGFEDFVRVGSIRKITKAILPYSLHTGSGGDTEQL---KELLALLKEDLTPAEKKYVKKSIEQHKLGANKTI----LQQVKVVGATCAACPFPCLN--------------------------ALK---------------------------------------------------FPVVMLDECSQMTEPASLLPIARFQCEKLVLVGDPKQLPPTIQGSESA-----------------------------------------HDKGLEQTLFDRLCLMGHKPVLLRTQYRCHPAISAIANELFYEGKLMDGVSKEDRSPLLDWLPTLCFYSV--NGVEQTERDNSFYNMAEAHFTVKLIQSLIASG----------------IDGSAIGVITLYKAQMCKVQNLLSS------------------------------------MHSEAFAIRAVQVSTVDAFQGAEKEIIVLSCVRTRQMGFIDSEKRMNVALTRAKRHLLIVGNLACLSKNRLWGRVI 786
BLAST of mRNA_Ecto-sp6_S_contig9.18199.1 vs. uniprot
Match: A0A7L3X0V3_9GRUI (ZGRF1 protein (Fragment) n=1 Tax=Atlantisia rogersi TaxID=2478892 RepID=A0A7L3X0V3_9GRUI) HSP 1 Score: 204 bits (520), Expect = 3.130e-52 Identity = 178/593 (30.02%), Postives = 255/593 (43.00%), Query Frame = 1
Query: 2731 PVVLVHGVFGAGKSLTL-VALCVMVDRIATEDARLRPSRGLPPRPKAEQIRVLLASGTNVAVDRVLMGLVSAGFDDIARLGSHRRTHKSLLDRVVHSSPPGRDAQKAVQSELQAMLKTAVG-ADRDEIGRALQASKAESFTTDQTKRLREARVTGVTCASATVPLLTRPPRSPRPFPRGGVVSGGNGSNGSVAARKTGVATGGAKTAGPWKRPAGVAGSNGRLLGGGRGSTGARGWSXXXXEGGRRGYDIVVLDESSQIVEPMSLLPVAVAQPRRLVLVGDPMQLPPPVARARSTVSAEXXXXXXXXXXXXXXXXXXSQRQMPKDAWLEKANARPGNGDTLEKTLFVRLAKLGVKPLLLGRQYRCHPQMSALASRLFYQGRLTDGVAARDRGPLVPGLAPLTLLDAAGRGAESTAPGGSIKNAFEARAVADVVASLLRAGSXXXXXXXXXXXXXXXVTAANIGVICLYKAQLAQVRRELESASSPTPGAASKPSSSSSPGVGVQPGGEGRDEGQQGGASSVSSCCRDVQVSTVDAFQGAEKDIIIVASTRTERLGFIVSPQRLCVALTRARHHLLVVGEKSVLVTNPLWREVV 4503
P+ ++ GVFGAGKS L V + +V+ +A P + ++L+AS TNVAVDR+L+GL+ GF+D R+GS R+ K++L +H+ G Q EL A+LK + A++ + ++++ K + T L++ +V G TCA+ P L A K + +V+LDE SQ+ EP SLLP++ Q +LVLVGDP QLPP + + S + LE+TLF RL +G KP+ L QYRCHP +SA+A+ LFY+G+L DGV+ DR PL+ L L G E T S N EA ++ SL+ +G + + IGVI LYKAQ+ +V+ L S S + + VQVSTVDAFQGAEK+III++ RT ++GFI S +R+ VALTRA+ HL +VG + L N LW V+
Sbjct: 117 PITIIRGVFGAGKSYLLSVVILFLVELFGISEATENP--------RPAPWKLLVASSTNVAVDRILLGLLDLGFEDFIRVGSIRKITKAILPYSLHAGSGGDTEQL---KELLALLKEDLTPAEKKYVKKSIEQHKLGANKTI----LQQVKVVGATCAACPFPCLN--------------------------ALK---------------------------------------------------FPVVMLDECSQMTEPASLLPISRFQCEKLVLVGDPRQLPPTIQGSESV-----------------------------------------HDKGLEQTLFDRLCLMGHKPVHLRTQYRCHPAISAIANELFYEGKLIDGVSKEDRSPLLDWLPTLCFYSV--NGVEQTERDNSFYNMAEAHFTVKLIQSLIASG----------------IEGSAIGVITLYKAQMCKVQNLLSS------------------------------------VHSEAFAIKTVQVSTVDAFQGAEKEIIILSCVRTRQMGFIDSEKRMNVALTRAKRHLQIVGNLACLSKNRLWGRVI 522 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18199.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig9.18199.1 >prot_Ecto-sp6_S_contig9.18199.1 ID=prot_Ecto-sp6_S_contig9.18199.1|Name=mRNA_Ecto-sp6_S_contig9.18199.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=1513bp MGDDLWSCVFSCDHPTKKRKRWTDGTLVFHRGSNKLQLRNESNTQNLASGback to top mRNA from alignment at Ecto-sp6_S_contig9:1795665..1814345+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig9.18199.1 ID=mRNA_Ecto-sp6_S_contig9.18199.1|Name=mRNA_Ecto-sp6_S_contig9.18199.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=18681bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:1795665..1814345+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig9:1795665..1814345+ >mRNA_Ecto-sp6_S_contig9.18199.1 ID=mRNA_Ecto-sp6_S_contig9.18199.1|Name=mRNA_Ecto-sp6_S_contig9.18199.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=4539bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:1795665..1814345+ (Ectocarpus species6 EcLAC_371)back to top |