mRNA_Ecto-sp6_S_contig9.18198.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig9.18198.1 vs. uniprot
Match: A0A6H5KLB1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLB1_9PHAE) HSP 1 Score: 493 bits (1268), Expect = 7.830e-173 Identity = 257/294 (87.41%), Postives = 268/294 (91.16%), Query Frame = 1
Query: 1 MEPITGFQGLMAAGGAGVPPGGVAAATGAPHQMIPTVSGDSGEDSVSNDGKRKTEMAKERNRLHARNTRARKKQYMEELKDKVESLHTKRASAAHSKEATARGEEEQIARWAATLKKVLDLRCEGVVDEAAWNEVLTEDFELSLPLTPYRKFDPADVEGGRRRVLVGVEGMISDTASLTEMCENLAERCRQRGGLSPPAVPAAASGSGGDNQPPRPRVHLKSCVSSGDLVFSSDQGIMCVFSMTTVDACDFGSPLEVEKNGMLRAAFVEGGKLDELEMMFDGIAVHQQLQKAMG 882
MEPITGFQGLMAAGGAGVPPGGVA AT APHQ+IPTVSGDSGEDSVSND KRKTEMAKERNRLHARNTRARKKQYMEELKDKVESLH KRA+A H+KE R +EE+IARWAATLK VLDLRC+GVVD A WNEVLTEDFELSLPLTPYRKFDPADVEGGRRRVLVGVEGMISDTASLTEMCENLAERCRQ+GGLSPP QPPRPRVHLKSCVS+GD+VFSSD+GIMCVFSMTTVDACDFGSPLEVEKNGMLRA FVEGGKLDELE+MFDGIAVHQQLQKAMG
Sbjct: 1 MEPITGFQGLMAAGGAGVPPGGVAGATVAPHQIIPTVSGDSGEDSVSNDCKRKTEMAKERNRLHARNTRARKKQYMEELKDKVESLHAKRAAAEHNKEXXXREDEEKIARWAATLKNVLDLRCQGVVDPAVWNEVLTEDFELSLPLTPYRKFDPADVEGGRRRVLVGVEGMISDTASLTEMCENLAERCRQKGGLSPPXXXXXXXXXXXXXQPPRPRVHLKSCVSNGDMVFSSDRGIMCVFSMTTVDACDFGSPLEVEKNGMLRATFVEGGKLDELEIMFDGIAVHQQLQKAMG 294
BLAST of mRNA_Ecto-sp6_S_contig9.18198.1 vs. uniprot
Match: A0A836C6X3_9STRA (BZIP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C6X3_9STRA) HSP 1 Score: 174 bits (442), Expect = 5.150e-47 Identity = 98/237 (41.35%), Postives = 144/237 (60.76%), Query Frame = 1
Query: 172 KERNRLHARNTRARKKQYMEELKDKVESLHTKRASAAHSKEATARGEEEQIARWAATLKKVLDLRCEGVVDEAAWNEVLTEDFELSLPLTPYRKFDPADVEGGRRRVLVGVEGMISDTASLTEMCENLAERCRQRGGLSPPAVPAAASGSGGDNQPPRPRVHLKSCVSSGDLVFSSDQGIMCVFSMTTVDACDFGSPLEVEKNGMLRAAFVEGGKLDELEMMFDGIAVHQQLQKAMG 882
+ERNR+HARNTRARKK Y +EL K+ +L ++ ++ ++ Q + WAATL++ +DLR G +DEA W+++L EDF++++P+TPYR F P+DV RR VL+GV+GM++DTASL M +N+ + R+ G R RV + + F G+MC F M T+DA G+ E EK+G+LRA F + G ++ELEM FDGIA++ QL +A G
Sbjct: 58 RERNRMHARNTRARKKAYADELTAKLAALTKEKEEHEKAEAEASKARTVQQSAWAATLRQAMDLRAAGCLDEAQWSKILAEDFKMTMPVTPYRSFSPSDVVNNRR-VLLGVDGMVADTASLQVMLDNIGTKTRKNEG--------------------RVRVEYLLGSDAAENCFFGAAGLMCTFMMRTLDAKAHGAACECEKSGILRARFDDAGCIEELEMAFDGIAMYHQLMRAKG 273
BLAST of mRNA_Ecto-sp6_S_contig9.18198.1 vs. uniprot
Match: A0A6H5K0R4_9PHAE (PAS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0R4_9PHAE) HSP 1 Score: 140 bits (354), Expect = 7.020e-34 Identity = 97/241 (40.25%), Postives = 141/241 (58.51%), Query Frame = 1
Query: 166 MAKERNRLHARNTRARKKQYMEELKDKVESLHTKRA-SAAHSKEATARGEEEQIARWAATLKKVLDLRCEGVVDEAAWNEVLTEDFELSLPLTPYRKFDPADVEGGRRRVLVGVEGMISDTASLTEMCENLAERCRQRGGLSPPAVPAAASGSGGDNQPPRPRVHLKSCVSSGDLVFSSDQGIMCVFSMTTVDACDFGSPLEVEKNGMLRAAF-VEGGKLDELEMMFDGIAVHQQLQKAMG 882
M +ERNR AR +R KKQ ++++ ++ L + A +AA KEA + ++ + AR A L+KV DLR +G DEA+W EVL+ D +++P+TPYR F+PADV RR VL+GV+GMISDT SL+ + +N+ + R SP ++ + L S G FS D G+MC F+M T+DA + E E NGM+R F + K++EL+M FD I+ +QQL A G
Sbjct: 93 MDRERNRRQARKSRELKKQCADKMQQQLIQLEKESAEAAAREKEAAKKLKDCRTARCQA-LRKVFDLRADGCTDEASWLEVLSPDLRMTMPITPYRSFNPADVVNNRR-VLLGVDGMISDTQSLSVLLDNIGVKTRLY--ESPVSI----------------KFTLASDADEGGAFFSRD-GLMCSFTMRTLDAVKHAARREWEVNGMVRVRFNSDTNKIEELDMTFDAISCYQQLMLASG 312
BLAST of mRNA_Ecto-sp6_S_contig9.18198.1 vs. uniprot
Match: A0A836CN81_9STRA (BZIP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN81_9STRA) HSP 1 Score: 119 bits (297), Expect = 1.160e-25 Identity = 90/243 (37.04%), Postives = 125/243 (51.44%), Query Frame = 1
Query: 157 KTEMAKERNRLHARNTRARKKQYMEELKDKVESLHTKRASAAHSKEAT-ARGEEEQIARWAATLKKVLDLRCEGVVDEAAWNEVLTEDFELSLPLTPYRKFDPADVEGGRRRVLVGVEGMISDTASLTEMCENLAERCRQRGGLSPPAVPAAASGSGGDNQPPRPRVHLKSCVSSGDLVFSSDQGIMCVFSMTTVDACDFGSPLEVEKNGMLRAAFVEGGKLDELEMMFDGIAVHQQLQKAMG 882
K E +++RNR HARNTR RKK Y+EEL+ V+ L +R +AA +K A AR + Q R++ L+ L R G A W L E F LP+TPYR F A+V G+R ++VG++ MI+D ASL M E++ RCR P RV ++ D + S D + C + + T +A G+ E GMLRA + KL LE+ FD + QQLQ+A G
Sbjct: 113 KAEASRDRNRKHARNTRLRKKAYIEELERTVQQLTAERDAAAAAKAAEGARAAQLQSVRFS-VLQMALFYRAAGNTCRADWATALEESFTCVLPITPYRSFPSAEVVSGQR-MIVGIDAMIADVASLALMVESVG-RCR----------------------PSERRVQVQYYAGPEDAITSGDM-LSCRWMLRTENAAACGALCECHAQGMLRARYSPSHKLAHLELAFDVMGFMQQLQRASG 329
BLAST of mRNA_Ecto-sp6_S_contig9.18198.1 vs. uniprot
Match: A0A7S3YIB3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YIB3_HETAK) HSP 1 Score: 115 bits (287), Expect = 3.050e-25 Identity = 85/244 (34.84%), Postives = 131/244 (53.69%), Query Frame = 1
Query: 172 KERNRLHARNTRARKKQYMEELKDKVESLHTKRASAAHSKEATARGEEEQIARWAA-------TLKKVLDLRCEGVVDEAAWNEVLTEDFELSLPLTPYRKFDPADVEGGRRRVLVGVEGMISDTASLTEMCENLAERCRQRGGLSPPAVPAAASGSGGDNQPPRPRVHLKSCVSSGDLVFSSDQGIMCVFSMTTVDACDFGSPLEVEKNGMLRAAFVEGGKLDELEMMFDGIAVHQQLQKAMG 882
++RNR HARNTR RKK +++ELK +V+ L +AA +E R E Q R AA L LD R GV D + W+ +L E F + +PLTPYR F + V+ G R+V G+E +++D ASL M +NL + + ++ P PRV +K ++ +L+ D IM ++M T +A G+ E++ GMLR AF + K+ +E++FD ++ +QL+K G
Sbjct: 121 RDRNREHARNTRLRKKAFVDELKKQVQDL-----AAAREREERERHLESQ--RSAAMNEIRFQVLATFLDYRGRGVKDLSLWSSILDEQFMMRMPLTPYRSFPQSQVQDGARKVK-GIEDVLADVASLQVMLDNLGKNTEKWKQVT--------------KSPNTPRVEMKYKINQKELLVQGDM-IMANWNMQTSNAMARGALAELKLYGMLRCAFTKFNKISYIELIFDVYSMLEQLKKCNG 341
BLAST of mRNA_Ecto-sp6_S_contig9.18198.1 vs. uniprot
Match: A0A7S2DLD9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DLD9_9STRA) HSP 1 Score: 112 bits (281), Expect = 9.470e-24 Identity = 86/244 (35.25%), Postives = 123/244 (50.41%), Query Frame = 1
Query: 157 KTEMAKERNRLHARNTRARKKQYMEELKDKVESLHTKRASAAHSKEATARGEEEQIARWAATLKKVLDLRCEGVVDEAAWNEVLTEDFELSLPLTPYRKFDPADVEGGRRRVLVGVEGMISDTASLTEMCENLAERCRQRGGLSPPAVPAAASGSGGDNQPPRPRVHLKSCVSSGDLVFSSDQGIMCVFSMTTVDACDFGSPLEVEKNGMLRAAFVEGGKLDELEMMFDGIAVHQQLQKAMG*K 888
K E +ERNR HAR TR RKK+YME LK ++E L + A+ + G++ + W L+ L LR D++ W + ++ L P+TPYR + ADV R VL+G++ +I D ASL LA C + G+ G NQ +V L+ + + + ++GIMC F M + + G EV K G LRA F GK+ +LE+ FD IA +QLQ A G K
Sbjct: 122 KEECRRERNRRHARETRLRKKEYMETLKSQLEQLSAQNAALEKQIKDKRLGQDAKHDLWITKLQGALALRASAEPDQSRWRNFVDDEIVLVHPITPYRSYRSADVISNRC-VLMGIQDIIDDAASLLIA---LAGLCNE--GIH----------DGTRNQ----KVQLRFNIDEQGMHYR-EEGIMCPFDMRSSNLTPLGLKSEVNKRGCLRAIFNSEGKVKQLELHFDPIAFWRQLQHASGAK 344
BLAST of mRNA_Ecto-sp6_S_contig9.18198.1 vs. uniprot
Match: A0A7S2B104_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B104_9STRA) HSP 1 Score: 108 bits (271), Expect = 3.970e-22 Identity = 75/237 (31.65%), Postives = 123/237 (51.90%), Query Frame = 1
Query: 172 KERNRLHARNTRARKKQYMEELKDKVESLHTKRASAAHSKEATARGEEEQIARWAATLKKVLDLRCEGVVDEAAWNEVLTEDFELSLPLTPYRKFDPADVEGGRRRVLVGVEGMISDTASLTEMCENLAERCRQRGGLSPPAVPAAASGSGGDNQPPRPRVHLKSCVSSGDLVFSSDQGIMCVFSMTTVDACDFGSPLEVEKNGMLRAAFVEGGKLDELEMMFDGIAVHQQLQKAMG 882
++RNR HARNTR RKK Y+E+LK V+ L + + + E E + + ++++++ R GVV+ W VL +DF ++LP+TP+R F+P +V G RR V+ GV GMI DTAS + ++ R + RG V + + G+ V +D M ++M+T +A G+ E GML+A F + + ++++FD ++ QQL +A G
Sbjct: 251 RDRNREHARNTRLRKKAYIEKLKQTVQVLSKECETITRDNQQDEVNETEILEQRHQVIQRMMNYRTSGVVNPEKWQAVLAQDFTMTLPITPHRFFNPNEVVGCRR-VVRGVSGMIQDTASFKVLISSIGRR-KYRG---------------------HGEVEVNFNMPDGETVIKNDL-FMTRWTMSTTNAMSKGALAECSLEGMLKATFADENTISSVDLIFDVMSFMQQLPEACG 463
BLAST of mRNA_Ecto-sp6_S_contig9.18198.1 vs. uniprot
Match: A0A7S1D1F4_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D1F4_CYCTE) HSP 1 Score: 104 bits (260), Expect = 5.720e-21 Identity = 81/244 (33.20%), Postives = 124/244 (50.82%), Query Frame = 1
Query: 157 KTEMAKERNRLHARNTRARKKQYMEELKDKVESLHTKRASAAHSKEATARGEEEQIARWAATLKKVLDLRCEGVVDEAAWNEVLTED-FELSLPLTPYRKFDPADVEGGR-RRVLVGVEGMISDTASLTEMCENLAERCRQRGGLSPPAVPAAASGSGGDNQPPRPRVHLKSCVSSGDLVFSSDQGIMCVFSMTTVDACDFGSPLEVEKNGMLRAAFVEGGKLDELEMMFDGIAVHQQLQKAMG 882
K + ++RNR HARNTR RKK Y+E+LK V+ L +R + + A E L LR W+ +L E F +P+TPYR F ++V+ + +R ++G++GMISDTASL + +L +R R PAA+ + + + + D V + +Q +M + M+TV+A FG+ +EV K GML F K+ LE+MFD +A QL++A G
Sbjct: 14 KVKANRDRNREHARNTRLRKKAYLEKLKSTVDELCRERDTLVSERAGAASLMVEIHNTRTEVLMSFFALRSTYEKQRDLWSSILDESCFSCVMPVTPYRSFPASEVQVSKCQRTILGIDGMISDTASLHVLLNSLIDRSR---------YPAAS-------------IQFRYTLVTEDAVVAGNQ-MMARWVMSTVNATQFGARMEVAKQGMLCCKFNSAHKIIGLELMFDVMAFMLQLKQAAG 234
BLAST of mRNA_Ecto-sp6_S_contig9.18198.1 vs. uniprot
Match: F0Y499_AURAN (BZIP domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y499_AURAN) HSP 1 Score: 104 bits (260), Expect = 1.710e-20 Identity = 84/256 (32.81%), Postives = 126/256 (49.22%), Query Frame = 1
Query: 157 KTEMAKERNRLHARNTRARKKQYMEELKDKVESLHTKR---------ASAAHSKEATARGEEEQIARWAATLKKVLDLRCEGVVDEAAWNEVLTEDFELSLPLTPYRKFDPADVEGGRRRVLVGVEGMISDTASLTEMCENLAERCRQ----RGGLSPPAVPAAASGSGGDNQPPRP-----RVHLKSCVSSGDLVFSSDQGIMCVFSMTTVDACDFGSPLEVEKNGMLRAAFVEGGKLDELEMMFDGIAVHQQLQ 870
K EM K+RNR HAR+TR RKKQY+E+LK +V L K+ AH ++ R +EQ+ A L+ L R G VD W +++ + ++LP TPYR + + R L GVE +I D S+ + + + R Q R PP G G + P P RV +++ + D+V D+ +MC + TT D G EV +G+ RA F + KL ++E+ FD ++ +QLQ
Sbjct: 986 KAEMTKQRNREHARSTRRRKKQYVEQLKKQVAELLAKQQQLNAREGFGEGAHGAPSSPR-HQEQVRVKTAVLQAFLLCRVNGTVDRDRWRDIVDDHIRVTLPQTPYRATNVGEKGPHGARRLKGVESLIRDCVSVARLVDMIRRRAGQLLAHRSRGEPPR-----DGDGAAARAPSPASLAARVEIQTHAAPEDVVIVGDR-LMCHWKATTRGLADMGFDAEVSLDGLGRATFHKN-KLRDVELSFDALSFTRQLQ 1233
BLAST of mRNA_Ecto-sp6_S_contig9.18198.1 vs. uniprot
Match: A0A7S2DGM6_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DGM6_9STRA) HSP 1 Score: 102 bits (254), Expect = 3.340e-20 Identity = 83/259 (32.05%), Postives = 127/259 (49.03%), Query Frame = 1
Query: 148 GKRKTEMAK----ERNRLHARNTRARKKQYMEELKDKVESLHTKRASAAHSKEATARGEEEQIARWAATL----------KKVLDLRCEGVVDEAAWNEVLTEDFELSLPLTPYRKFDPADVEGGRRRVLVGVEGMISDTASLTEMCENLAERCRQRGGLSPPAVPAAASGSGGDNQPPRPRVHLKSCVSSGDLVFSSDQGIMCVFSMTTVDACDFGSPLEVEKNGMLRAAFVEGGKLDELEMMFDGIAVHQQLQKAMG 882
GKRK +K ERNR HARN+R RKK ++E+L+ L K E +Q+ R AATL +++L R +G + W+ +L EDF +LP+TPYR F+P ++ R VL GVEG+I DTASL ++ ++ R RG P A+ + L S ++++ C + M + DA G+ E+E +GML+A F K+ +E +FD ++ L +A+G
Sbjct: 70 GKRKPPPSKVDVKERNRTHARNSRLRKKAHVEKLQRTALILSCKNEQM----------ERQQMERMAATLDIQATQRAMVQRLLYYRVQGCIVPGYWHRILAEDFTFTLPVTPYRYFNPGEISRSGR-VLYGVEGIIRDTASLAQLFLSVGPR-HHRGSFKP-AISM--------------EIDLDSVAQERNILW-------CRWIMRSTDAVANGALAELESDGMLQACFSTDHKIQSVEFLFDVLSFTFSLSRALG 294 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18198.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig9.18198.1 >prot_Ecto-sp6_S_contig9.18198.1 ID=prot_Ecto-sp6_S_contig9.18198.1|Name=mRNA_Ecto-sp6_S_contig9.18198.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=295bp MEPITGFQGLMAAGGAGVPPGGVAAATGAPHQMIPTVSGDSGEDSVSNDGback to top mRNA from alignment at Ecto-sp6_S_contig9:1789611..1793842- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig9.18198.1 ID=mRNA_Ecto-sp6_S_contig9.18198.1|Name=mRNA_Ecto-sp6_S_contig9.18198.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=4232bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:1789611..1793842- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig9:1789611..1793842- >mRNA_Ecto-sp6_S_contig9.18198.1 ID=mRNA_Ecto-sp6_S_contig9.18198.1|Name=mRNA_Ecto-sp6_S_contig9.18198.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=885bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:1789611..1793842- (Ectocarpus species6 EcLAC_371)back to top |