mRNA_Ecto-sp6_S_contig9.18191.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig9.18191.1
Unique NamemRNA_Ecto-sp6_S_contig9.18191.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
BLAST of mRNA_Ecto-sp6_S_contig9.18191.1 vs. uniprot
Match: A0A6H5KKA5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKA5_9PHAE)

HSP 1 Score: 751 bits (1938), Expect = 3.810e-270
Identity = 391/439 (89.07%), Postives = 401/439 (91.34%), Query Frame = 3
Query:  111 MSPSLAVMGAEPRCNENSRSGGRSSTRDARSCGXXXXXXXXXXXXXXXXXXXXXXXXXXXTLCAVSAVIAGYAAASLPCGAGFVAPGVQQAGRSGAAAVPSYVRSAAPGGGESRRAGMRRRRPSDAVHMVAMEPRVNSKGSATETVAPARPAGKEGPHLPWTGSMAGPEFPLTYMPFMEHMLNVLARSFGEMTALPLADKLAFVDNTDKKARMLSMNFASPEVRKVRLTYFDAGDKVQVLNAVIYPDPSLDMPLLGIDLISFGGKHLAGIDFQPLFDDDSCRNRYSDKLAPIKAKYPEFAQKMSPRFYDSARFFSEEMLFGRYEDEAIVDEKLFPAFDEYLSLYISDLLKAAEDGGNPSPEARARVLDRHRAYDQYNAERDPAHGLFRTYFGEAYSEDFMDNFLFELSTRPAGGYPKGAARGGGGGANGRPAGGGNPHA 1427
            MSPSL V+GAEPRCNENSR+GGRSS+RDA SCG                           TLCA SAVIAGYAAASLPCGAGFVAPGVQQAG   AAAVPSYVRSAAPGGGE+RRAGMRRRRPSDAVHMVAMEPRVNSKGSATETVAPARP GKEGPHLPWTGSMAGPEFPLTYMPFMEHMLNVLARSFGEMTALPLADKLAFV+NTDKKARMLSM+FASPEVRKVRLTYFDAGDKVQVLNAVIYPDPSLDMPLLGIDLISFGGKHLAGIDFQPLFD+DSCR RYSDKLAPIKAKYPEFAQKMSPRFYDSARFFSEEMLFGRYEDEAIV+EKLFPAFDEYLSLYISDLLKAAE+GGNPSPEA+ARVLDRHRAYDQYNAERDPAHGLFRTYFGEAYSEDFMDNFLFELSTRP GGYPKG ARGGGGGANGRPAGG NPHA
Sbjct:    1 MSPSLGVIGAEPRCNENSRNGGRSSSRDAWSCGRAGSRWQQETGEQRRREGRITRRRRR-TLCAFSAVIAGYAAASLPCGAGFVAPGVQQAGGRSAAAVPSYVRSAAPGGGETRRAGMRRRRPSDAVHMVAMEPRVNSKGSATETVAPARPPGKEGPHLPWTGSMAGPEFPLTYMPFMEHMLNVLARSFGEMTALPLADKLAFVENTDKKARMLSMSFASPEVRKVRLTYFDAGDKVQVLNAVIYPDPSLDMPLLGIDLISFGGKHLAGIDFQPLFDNDSCRCRYSDKLAPIKAKYPEFAQKMSPRFYDSARFFSEEMLFGRYEDEAIVEEKLFPAFDEYLSLYISDLLKAAEEGGNPSPEAQARVLDRHRAYDQYNAERDPAHGLFRTYFGEAYSEDFMDNFLFELSTRPEGGYPKGTARGGGGGANGRPAGG-NPHA 437          
BLAST of mRNA_Ecto-sp6_S_contig9.18191.1 vs. uniprot
Match: D8LGZ4_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGZ4_ECTSI)

HSP 1 Score: 449 bits (1155), Expect = 6.780e-154
Identity = 222/233 (95.28%), Postives = 227/233 (97.42%), Query Frame = 3
Query:  723 DNTDKKARMLSMNFASPEVRKVRLTYFDAGDKVQVLNAVIYPDPSLDMPLLGIDLISFGGKHLAGIDFQPLFDDDSCRNRYSDKLAPIKAKYPEFAQKMSPRFYDSARFFSEEMLFGRYEDEAIVDEKLFPAFDEYLSLYISDLLKAAEDGGNPSPEARARVLDRHRAYDQYNAERDPAHGLFRTYFGEAYSEDFMDNFLFELSTRPAGGYPKGAARGGGGGANGRPAGGGNP 1421
            + T K A   SMNFASPEVRKVRLTYFDAGDKVQVLNAVIYPDPSLDMPLLGIDLISFGGKHLAGIDFQPLFDDDSCRNRYSDKLAPIKAKYPEFAQKMSPRFYDSARFFSEEMLFGRYEDEAIVDEKLFPAF+EYLSLYISDLLKAAE+GGNPSPEARARVLDRHRAYDQYNAERDPAHGLFRTYFGEAYSE+FMDNFLFEL+TRPAGGYPKGAARGGGGGANGRPAGGGNP
Sbjct:   32 ETTTKNACNTSMNFASPEVRKVRLTYFDAGDKVQVLNAVIYPDPSLDMPLLGIDLISFGGKHLAGIDFQPLFDDDSCRNRYSDKLAPIKAKYPEFAQKMSPRFYDSARFFSEEMLFGRYEDEAIVDEKLFPAFEEYLSLYISDLLKAAEEGGNPSPEARARVLDRHRAYDQYNAERDPAHGLFRTYFGEAYSENFMDNFLFELNTRPAGGYPKGAARGGGGGANGRPAGGGNP 264          
BLAST of mRNA_Ecto-sp6_S_contig9.18191.1 vs. uniprot
Match: D8LGZ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGZ3_ECTSI)

HSP 1 Score: 334 bits (856), Expect = 2.680e-109
Identity = 195/214 (91.12%), Postives = 195/214 (91.12%), Query Frame = 3
Query:  111 MSPSLAVMGAEPRCNENSRSGGRSSTRDARSCGXXXXXXXXXXXXXXXXXXXXXXXXXXXTLCAVSAVIAGYAAASLPCGAGFVAPGVQQAGRSGAAAVPSYVRSAAPGGGESRRAGMRRRRPSDAVHMVAMEPRVNSKGSATETVAPARPAGKEGPHLPWTGSMAGPEFPLTYMPFMEHMLNVLARSFGEMTALPLADKLAFVDNTDKKARML 752
            MSPSLAVMGAEPRCNENSRSGGRSSTRDA SC               XXXXXXXXXXXXXTLCAVSAVIAGYAAASLPCGAGFVAPGVQQAGRS AAAVPSYVRSAAPGGGESRRAGMRRRRPSDAV MVAMEPRVNSKG ATETVAPARPAGKEGPHLPWTGSMAGPEFPLTYMPFMEHMLNVLARSFGEMTALPLADKLAFVDNTDKKARML
Sbjct:    1 MSPSLAVMGAEPRCNENSRSGGRSSTRDAWSCARGGSSWRKQETGEQXXXXXXXXXXXXXTLCAVSAVIAGYAAASLPCGAGFVAPGVQQAGRSAAAAVPSYVRSAAPGGGESRRAGMRRRRPSDAVRMVAMEPRVNSKGPATETVAPARPAGKEGPHLPWTGSMAGPEFPLTYMPFMEHMLNVLARSFGEMTALPLADKLAFVDNTDKKARML 214          
BLAST of mRNA_Ecto-sp6_S_contig9.18191.1 vs. uniprot
Match: A0A835YZG6_9STRA (Ferredoxin-dependent bilin reductase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZG6_9STRA)

HSP 1 Score: 292 bits (747), Expect = 1.560e-90
Identity = 164/303 (54.13%), Postives = 196/303 (64.69%), Query Frame = 3
Query:  465 RRRRPSD--AVHMVAMEPRVNSKGSATETVAPARPAGKEGPHLPWTGSMAGPEFPLTYMPFMEHMLNVLARSFGEMTALPLADKLAFVDNTD--KKARMLSMNFASPEVRKVRLTYFDAGDKVQVLNAVIYPDPSLDMPLLGIDLISFGGKHLAGIDFQPLFDDDSCRNRYSDKLAPIKAKYPEFAQKMSPRFYDSARFFSEEMLFGRYEDEAIVDEKLFPAFDEYLSLYISDLLKAAEDGGNPSPEARARVLDRHRAYDQYNAERDPAHGLFRTYFGEAYSEDFMDNFLFELSTRPAGGYPK 1361
            RRR PS   A+ MVA E R  +  +A +       A  E   LPW  S AG E PL YMPFM++ L  L     E+   P+ +++A   +    K  R+ S+ F  P +RK RLTYFDAG  VQV N V+YPDPS+D P+LG+DLI+FG KHLAGIDFQPL  D    +RY   L  IKA+YP+ +Q MS RFYDSARFFS  MLF R+ED  +V  +LFPAF EYLS Y+  L KA       +PE R  VL+RH AYDQYNAERDPAHGLF  YFG  +SE FMD+FLFELSTRP  GYPK
Sbjct:   75 RRRAPSRSAALTMVATEVRPAAVSAARQEQQQQDAASAEA-FLPWIESCAGAEHPLLYMPFMDYSLEQLVSQL-ELQPTPMDEEMALQHSLHPAKPGRIASLLFNGPLIRKARLTYFDAGPAVQVFNMVVYPDPSIDAPILGVDLIAFGKKHLAGIDFQPLHADAGYADRYLSTLGDIKARYPDLSQTMSARFYDSARFFSPHMLFARFEDRDLVPSQLFPAFSEYLSEYVEMLSKAPRVS---TPEFRDAVLERHTAYDQYNAERDPAHGLFVQYFGHEWSEKFMDDFLFELSTRPEEGYPK 372          
BLAST of mRNA_Ecto-sp6_S_contig9.18191.1 vs. uniprot
Match: A0A5J4YL15_PORPP (15,16-dihydrobiliverdin:ferredoxin oxidoreductase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YL15_PORPP)

HSP 1 Score: 224 bits (572), Expect = 1.630e-65
Identity = 122/251 (48.61%), Postives = 160/251 (63.75%), Query Frame = 3
Query:  585 LPWTGSMAGPEFPLTYMPFMEHMLNVLARSFGEMTALPLADKLAFVDNTDKKARMLSMNFASPEVRKVRLTYFDAGDKVQVLNAVIYPDPSLDMPLLGIDLISFGGKHLAGI-DFQPLFDDDSCRNRYSDKLAPIKAKYPEFAQKMSPRFYDSARFFSEEMLFGRYEDEAIVDEKLFPAFDEYLSLYISDLLKAAEDGGNPSPEARARVLDRHRAYDQYNAERDPAHGLFRTYFGEAYSEDFMDNFLFELS 1334
            LP+  S+AG EF L +MPF+ H   V+  +F +++ LP  D+LAF  +T K AR+ S  + +PE RK+R TY DAG + QV N+V YPDP  D+PLLGID +SFG K +  I DFQPL  D +   +Y   LAP+KAKY   A +MS +FYD   FFS+++ FGR+++   V E+LFPAF EYL +Y   +  A        PE  A  L R + YDQY+AERDPA GLF TYFG  ++E F   FLFE S
Sbjct:   66 LPYERSIAGEEFELLFMPFVLHQNKVMRDTF-QVSDLPFDDELAFQSSTKKAARIESWCYKTPEFRKIRSTYIDAGIQAQVFNSVWYPDPKYDLPLLGIDFLSFGKKKVICIMDFQPLTQDAAYLEKYISPLAPVKAKYKSLAGEMSAKFYDENVFFSKQLAFGRFDNAGPVMEELFPAFKEYLDVYFEHMQSATPTS---DPEQIALNLQRQKDYDQYSAERDPAIGLFSTYFGPEWAEKFTHEFLFEHS 312          
BLAST of mRNA_Ecto-sp6_S_contig9.18191.1 vs. uniprot
Match: A0A7S3ENW0_9RHOD (Hypothetical protein n=4 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3ENW0_9RHOD)

HSP 1 Score: 216 bits (550), Expect = 1.770e-62
Identity = 115/254 (45.28%), Postives = 161/254 (63.39%), Query Frame = 3
Query:  585 LPWTGSMAGPEFPLTYMPFMEHMLNVLARSFGEMTALPLADKLAFVDNTDKKARMLSMNFASPEVRKVRLTYFDAGDKVQVLNAVIYPDPSLDMPLLGIDLISFGGKH-LAGIDFQPLFDDDSCRNRYSDKLAPIKAKYPEFAQKMSPRFYDSARFFSEEMLFGRYEDEAIVDEKLFPAFDEYLSLYISDLLKAAEDGGNPSPEARARVLDRHRAYDQYNAERDPAHGLFRTYFGEAYSEDFMDNFLFELSTRP 1343
            LPW  S+AG +  + +MPF+E    V+  +   +  LP   +L+F  ++ KKA++ S NF S   RK+RLTY DAG   QV N+V YPDP  D+PLLG+D +SFG K  L  +DFQPL  + +   +Y + L PIK+KYP  A +M+ RFYD  +FFS+++ FGR+++   V E+LFPAF+EYL+ Y+  + K A       P+  A  L+  + YD Y+AERDPA GLF TYFG  ++  F  +FLFELS  P
Sbjct:   46 LPWEKSIAGDDVEMLFMPFIELQNRVMFDTQKNLKDLPFESELSFQSSSRKKAKIESWNFQSDTFRKIRLTYIDAGIPAQVFNSVWYPDPKYDLPLLGVDFLSFGKKKILCVLDFQPLKQEKAYLEKYCEILDPIKSKYPSLAGQMTARFYDENQFFSKQLAFGRFDNPQPVMEELFPAFEEYLNTYVK-MFKDAP--ATEDPKEIAANLELQKEYDIYSAERDPAVGLFSTYFGGEWAVKFTHDFLFELSETP 296          
BLAST of mRNA_Ecto-sp6_S_contig9.18191.1 vs. uniprot
Match: M2XA99_GALSU (15,16-dihydrobiliverdin:ferredoxin oxidoreductase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XA99_GALSU)

HSP 1 Score: 216 bits (550), Expect = 2.310e-62
Identity = 113/249 (45.38%), Postives = 159/249 (63.86%), Query Frame = 3
Query:  591 WTGSMAGPEFPLTYMPFMEHMLNVLARSFGEMTALPLADKLAFVDNTDKKARMLSMNFASPEVRKVRLTYFDAGDKVQVLNAVIYPDPSLDMPLLGIDLISFGGKH-LAGIDFQPLFDDDSCRNRYSDKLAPIKAKYPEFAQKMSPRFYDSARFFSEEMLFGRYEDEAIVDEKLFPAFDEYLSLYISDLLKAAEDGGNPSPEARARVLDRHRAYDQYNAERDPAHGLFRTYFGEAYSEDFMDNFLFELS 1334
            W  S+AG + P+ Y PF+E M N L  SF  +   PL++ LA   ++ K AR+ S  +  P+ RK+RLTY DAG   QV NAV YP  SL++P+LG+D +SFGGK+ L  +DFQPL +D    ++Y   L PI+ +Y + A +MS RFYD  RFFS+E+LFGR++    + E+LFPAF EYL LYI+   +  ED      ++R+ +      YD+Y+AE+DPA  LFR+YFG  ++  F+  FLFE S
Sbjct:   59 WKTSVAGSDIPMIYSPFLEDMQNTLFASFETVEDYPLSEFLASAQSSKKPARIESWCYQCPKFRKIRLTYLDAGVAAQVFNAVWYPISSLELPILGVDFLSFGGKNVLCVMDFQPLMNDQYYLDKYIQPLHPIRERYADLAGRMSSRFYDENRFFSKELLFGRFDSTKPIYERLFPAFREYLDLYITLAKQTVEDD-----KSRSIIWQLQCEYDRYSAEKDPAMSLFRSYFGSTWAHRFVYEFLFENS 302          
BLAST of mRNA_Ecto-sp6_S_contig9.18191.1 vs. uniprot
Match: A0A7S4VTV3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VTV3_9STRA)

HSP 1 Score: 217 bits (552), Expect = 7.480e-62
Identity = 116/275 (42.18%), Postives = 171/275 (62.18%), Query Frame = 3
Query:  585 LPWTGSMAGP--EFPLTYMPFMEHMLNVLARSFGEMTALPLADK-----LAFVDNTDKKARMLSMNFASPEVRKVRLTYFDAGDKVQVLNAVIYPDPSLDMPLLGIDLISFGGK-HLAGIDFQPLFDDDSCR-NRYSDKLAPIKAKYPEFAQKMSPRFYDSARFFSEEMLFGRYEDEAIVDEKLFPAFDEYLSLYISDLLKAAEDGGNPSPEARARVLDRHRAYDQYNAERDPAHGLFRTYFGEAYSEDFMDNFLFELSTRPAGGYPKGAARGGG 1382
            +PW  ++     E PL YMPF E  +  +  +   +  +P          +F DN +KKAR+++  +AS E RK+R++Y+DAGD  QV N+V YPDP  ++P+LGIDL++F  K +LA +DFQPL+DD++     +   L PIK +Y     +MS +FYD  +FFS++MLF R+EDE +V E LFPAF  Y+  ++ DL+ + E   +  P +  RV+ R + YD Y+AERDPA GLF   FG+A++++F+ +FLF LS R  GG       GGG
Sbjct:   77 MPWRDTVGSTDKENPLLYMPFWEWQMEFMKETLTNLRVVPAKSSTSNLDFSFNDNKEKKARIVNHCYASDEYRKIRMSYYDAGDNTQVFNSVWYPDPKYNLPVLGIDLLAFNRKKYLAIVDFQPLYDDEAEHATTFEHLLRPIKDEYDSLKGRMSAKFYDETKFFSQQMLFARFEDEGVVIEDLFPAFQRYVKTHV-DLVSSTE--ADTQPSSVERVMTRQQEYDTYSAERDPATGLFAAMFGKAWADEFVYDFLFSLSERAEGGLKIPPMMGGG 348          
BLAST of mRNA_Ecto-sp6_S_contig9.18191.1 vs. uniprot
Match: A0A7S2RIT5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RIT5_9STRA)

HSP 1 Score: 213 bits (543), Expect = 2.550e-61
Identity = 128/305 (41.97%), Postives = 177/305 (58.03%), Query Frame = 3
Query:  438 GGESRRAGMRRRRPSDAVHMVAMEPRVNSKGSATETVAPARPAGKEGPHLPWTGSMAGPEFPLTYMPFMEHMLNVLARSFGEMTALPLADKLAFVDNTDKKARMLSMNFASPEVRKVRLTYFDAGDKVQVLNAVIYPDPSLDMPLLGIDLISFGGKH-LAGIDFQPLFDDDSCRNR--YSDKLAPIKAKYPEFAQKMSPRFYDSARFFSEEMLFGRYEDEAIVDEKLFPAFDEYLSLYISDLLKAAEDGGNPSPEARARVLDRHRAYDQYNAERDPAHGLFRTYFGEAYSEDFMDNFLFELSTRP 1343
            GG++   G  R RP+  V    +     S   +T   A      +     PWT ++A     L YM F  H   +L    G  T LPL D L+   N  K+AR+ S  + +   RKVR+TYFDAG+KVQV N++ YP    D P+LG+DL+ FG K  LA ID QPL D ++      +S     +K ++P    KMS RFYD  +FFS+ MLFGR+ED + +  ++ PAF EYL +Y+ DL+K      + + +A ARVL +  AYDQY+AERDPAH LF +YFGE +++++M +FLFELST P
Sbjct:   11 GGDNMMGGSMRVRPAVVVFSALVLSLGRSLAPSTIRAAAPLSTPQSTSRPPWTSTIASDGAALHYMDFYRHQEEILVGKLGA-TPLPLKDSLSGAVNHGKEARIASACYETDVFRKVRMTYFDAGNKVQVFNSLWYPRLEYDAPVLGVDLLCFGKKKILAVIDCQPLVDRENSEYHAEFSQPFLRVKEQFPSLCGKMSNRFYDENQFFSDGMLFGRFEDTSPIASEVLPAFQEYLQVYV-DLVKDVPR--DTTDKATARVLAQQAAYDQYSAERDPAHALFVSYFGEEWADEYMSDFLFELSTPP 311          
BLAST of mRNA_Ecto-sp6_S_contig9.18191.1 vs. uniprot
Match: A0A7S0EA56_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0EA56_9CRYP)

HSP 1 Score: 214 bits (544), Expect = 4.580e-61
Identity = 110/248 (44.35%), Postives = 156/248 (62.90%), Query Frame = 3
Query:  585 LPWTGSMAGPEFPLTYMPFMEHMLNVLARSFGEMTALPLADKLAFVDNTDKKARMLSMNFASPEVRKVRLTYFDAGDKVQVLNAVIYPDPSLDMPLLGIDLISFGGKH-LAGIDFQPLFDDDSCRNRYSDKLAPIKAKYPEFAQKMSPRFYDSARFFSEEMLFGRYEDEAIVDEKLFPAFDEYLSLYISDLLKAAEDGGNPSPEARARVLDRHRAYDQYNAERDPAHGLFRTYFGEAYSEDFMDNFLF 1325
            LPW  S+AG E  L YMPF+E  L+ + ++F +M  LP  + L+   +T K A + S  + + E RK+RLTY DAG   QV N+V YP  + D P+ GID ++FG K  LA +D QPL  D +   +Y D L P++ KY E   +MS +FYD  RFFS+++LFGR++++  V + LFPAF EY+  Y+  + +      N S +  + V +  R YDQY+AE+DPA GLF TY+GE ++EDF  NFLF
Sbjct:   86 LPWKESVAGAEHKLLYMPFLEWQLDFMKKNFPDMKDLPFEEHLSKQTSTKKPAVIESWQYETKEFRKIRLTYIDAGQNAQVFNSVWYPRHTYDAPVFGIDFLAFGKKKVLAILDLQPLTQDPAYLEKYIDPLVPLRNKYEELCGRMSSKFYDETRFFSKQLLFGRFDNDEPVMKSLFPAFQEYMEYYLKMIRELTP---NDSNDFTSHVAELQREYDQYSAEKDPAVGLFSTYWGENWAEDFTYNFLF 330          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18191.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KKA5_9PHAE3.810e-27089.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LGZ4_ECTSI6.780e-15495.28Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D8LGZ3_ECTSI2.680e-10991.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YZG6_9STRA1.560e-9054.13Ferredoxin-dependent bilin reductase-domain-contai... [more]
A0A5J4YL15_PORPP1.630e-6548.6115,16-dihydrobiliverdin:ferredoxin oxidoreductase ... [more]
A0A7S3ENW0_9RHOD1.770e-6245.28Hypothetical protein n=4 Tax=Rhodosorus marinus Ta... [more]
M2XA99_GALSU2.310e-6245.3815,16-dihydrobiliverdin:ferredoxin oxidoreductase ... [more]
A0A7S4VTV3_9STRA7.480e-6242.18Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2RIT5_9STRA2.550e-6141.97Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S0EA56_9CRYP4.580e-6144.35Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig9contigEcto-sp6_S_contig9:1740251..1744263 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score448.4
Seed ortholog evalue4e-123
Seed eggNOG ortholog2880.D8LGZ4
Model size1615
Hectar predicted targeting categorysignal anchor
Exons6
EggNOG free text desc.Ferredoxin-dependent bilin reductase
EggNOG OGs28II3@1,2S2CU@2759
Ec32 ortholog descriptionFerredoxin-dependent bilin reductase
Ec32 orthologEc-14_001370.1
Cds size1320
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig9.18191.1prot_Ecto-sp6_S_contig9.18191.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig9 1740361..1744059 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350535.357479-UTR-Ecto-sp6_S_contig9:1740250..17403601682350535.357479-UTR-Ecto-sp6_S_contig9:1740250..1740360Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig9 1740251..1740360 +
1682350535.4362526-UTR-Ecto-sp6_S_contig9:1744059..17441611682350535.4362526-UTR-Ecto-sp6_S_contig9:1744059..1744161Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig9 1744060..1744161 +
1682350535.444719-UTR-Ecto-sp6_S_contig9:1744180..17442631682350535.444719-UTR-Ecto-sp6_S_contig9:1744180..1744263Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig9 1744181..1744263 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350535.3681324-CDS-Ecto-sp6_S_contig9:1740360..17407471682350535.3681324-CDS-Ecto-sp6_S_contig9:1740360..1740747Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 1740361..1740747 +
1682350535.3855047-CDS-Ecto-sp6_S_contig9:1741136..17413931682350535.3855047-CDS-Ecto-sp6_S_contig9:1741136..1741393Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 1741137..1741393 +
1682350535.4009235-CDS-Ecto-sp6_S_contig9:1742747..17429541682350535.4009235-CDS-Ecto-sp6_S_contig9:1742747..1742954Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 1742748..1742954 +
1682350535.4177318-CDS-Ecto-sp6_S_contig9:1743315..17434291682350535.4177318-CDS-Ecto-sp6_S_contig9:1743315..1743429Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 1743316..1743429 +
1682350535.4279242-CDS-Ecto-sp6_S_contig9:1743704..17440591682350535.4279242-CDS-Ecto-sp6_S_contig9:1743704..1744059Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 1743705..1744059 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig9.18191.1

>prot_Ecto-sp6_S_contig9.18191.1 ID=prot_Ecto-sp6_S_contig9.18191.1|Name=mRNA_Ecto-sp6_S_contig9.18191.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=440bp
MSPSLAVMGAEPRCNENSRSGGRSSTRDARSCGGGGSSWRKQETGEQRRR
AGSSTRRRRRTLCAVSAVIAGYAAASLPCGAGFVAPGVQQAGRSGAAAVP
SYVRSAAPGGGESRRAGMRRRRPSDAVHMVAMEPRVNSKGSATETVAPAR
PAGKEGPHLPWTGSMAGPEFPLTYMPFMEHMLNVLARSFGEMTALPLADK
LAFVDNTDKKARMLSMNFASPEVRKVRLTYFDAGDKVQVLNAVIYPDPSL
DMPLLGIDLISFGGKHLAGIDFQPLFDDDSCRNRYSDKLAPIKAKYPEFA
QKMSPRFYDSARFFSEEMLFGRYEDEAIVDEKLFPAFDEYLSLYISDLLK
AAEDGGNPSPEARARVLDRHRAYDQYNAERDPAHGLFRTYFGEAYSEDFM
DNFLFELSTRPAGGYPKGAARGGGGGANGRPAGGGNPHA*
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mRNA from alignment at Ecto-sp6_S_contig9:1740251..1744263+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig9.18191.1 ID=mRNA_Ecto-sp6_S_contig9.18191.1|Name=mRNA_Ecto-sp6_S_contig9.18191.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=4013bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:1740251..1744263+ (Ectocarpus species6 EcLAC_371)
CGTTGATCAAGTTGGGAAGGACAGAAAGAGGAGGTGGGGCGAAAAGGAGA GTCCGAGCATCACGCCCACACTCGCAAGCCTCCTCTTCACCCCGTCTCTG TCTGAGGAAAATGTCGCCGTCTCTGGCCGTAATGGGCGCCGAACCGCGAT GTAACGAAAACAGCAGGAGCGGCGGGAGGAGCAGCACACGGGACGCTAGG TCATGCGGGGGAGGGGGCAGCAGCTGGCGAAAGCAGGAGACGGGCGAGCA GCGGCGGCGAGCGGGGAGCAGCACCCGGAGAAGGAGACGGACGCTTTGCG CGGTTTCCGCCGTGATCGCCGGCTACGCAGCTGCCTCTCTGCCGTGCGGA GCGGGCTTCGTGGCGCCAGGCGTGCAGCAGGCCGGCCGATCAGGTGCTGC TGCGGTACCCTCGTATGTTCGTTCAGCAGCGCCGGGCGGGGGAGAGAGCA GGAGGGCAGGAATGCGGCGAAGACGACCATCGGATGCCGTACACATGGTG GGTAGAGGTCACGTTCTTCGAGGGCAGTCTTGCGTGGCCGTGCTCGTGTT GCTCAACACATGACAGCATATGCACATACATGTTACGCCCGTAATCGTCT CCTCTCCTCTCTTGTCGAAACATGCATTTGTTTTTTCATGGATCTTTTTT TGTCTACTGCTGTACAAAGAACGACATGGAAGATTCTTTCGTTCAAGGTT AAGATTTCGACCCGCATGCCATCATCTCTCAAGGGGTTCCATTCCTCCTC CCTCCATGTGTGTTTCCCCGCCATACAGCTATGCCACCTCTATCCCAAGT CCTGTATCGAAGGTACCTCTTCCTATGAATCCCTCACACGACAACATGTT GTTGTTATTCAACTCTGGCGTACATATTTGGGGCAGGTTGCAATGGAGCC TCGCGTTAACTCGAAGGGCTCGGCGACGGAAACGGTGGCGCCGGCAAGGC CTGCTGGCAAGGAGGGGCCGCACCTGCCGTGGACGGGGTCGATGGCGGGC CCGGAGTTCCCCCTGACGTACATGCCGTTCATGGAGCACATGCTGAACGT GCTGGCGCGCTCTTTCGGGGAGATGACGGCGCTGCCTCTAGCCGACAAGC TGGCCTTCGTAGACAACACGGACAAGAAGGCCCGCATGTTGAGGTTAGTT CCCCTTTTTGGCACCTGGTATAGTAGTACTACTTTGAGCGCCCGCCGCGT GTCTGTACACGGCATGTAGGATGCGTTGGTATATATATAGCATGGCGGAG GTGCTGTGTTTGCCAAAGGCAGTCCGTTCATTCCCGTCGCGTCGGGTGCA ACAGACATAAACATATAGCACCAGCTGTGCTACACAGCAGTAGCATGTCG CTCGGCGATCATGAACTAGATTCTACGTGGAATGCCTCTTGTACATCCCT GGAAAAGTTTTGTGCGTGTCTGAGGTGGCGACGTATTTTGCCGATTCGGT AACAGGTGGCTCGAAGAGATGCTACGACTATGGGGATCAGTTGAACCGCA AGTGAACGTCATTCGATAGTTGAAACCCAACAGCATACTTGTACGGGTAT CGGCTGAAACACAAGTGGTTTGGCTGAGAGGAGTGCAACTGCTGGCGCTG ATCTTAGTACTGCCGCTTCGGACGGGACAGCAGTTGCACCTGCTCACAGT TAATATACACGACGAGTATTTAGCACGGAAAGAACTTCATACCTGTCCGT GTAGGCCAGATGGTCTTGCACACATGCATGTACGTGCACGTATGCATTTT CGTGTGTTGTGTATTGTTTTGTTTTGAATCTCGGAAGTACACCGCTTGGA ATGTACTGAGTATGATTGGTGGTTGCTTGCCGGGCGGGTAGCACATGCCA TACACTGCGAGCAGGTGCGCCTGCTGTCTCTGACGAAGCGGCAGTAGATG AGCAGCAGCAGTTGCAGTCCTGTCAGTTTAGTTGCGTTTCAACGGATGGA CGGCAGCATCTCCTCGTAGCGTTACCGAATCGGCGTTACCTGGCCACCTC AGACCAAACAAAATTATTCTTTGCATGTGGGGACGGCGTTCTAGAATCTA CCCGGGACAGGGAGTAGATGAGTGCCGGGCAATTGAAGCATTTTTGTTAT CCACGTGATCCAAAAGGCATACTATATTTTTCGACGGGCTCGTGAGGACT CGCCGTGCTATGGTTTGGTTCGATGTTTTCAACCAGCTGTGTCGCACACT CCCCCGTGTTTGTAGTCTACCGGTGGCAGTAGCGGGTCGAGCCTTGTCGG CTAGCACAGGGGGGCAGCTGAGCTGGCGGGAAGATGTGACCCGGAGGGCG GAGAGTGCATGGAAGTAGAAGTGGGTTCGATACGGGGGGTAACCAAGAAT GGCGCTTGGATACTGGGTGTATGTTCTTGTGGACGTCGTCTGCGTGTGCT TGTGGATGCGCGCATTGCTCCTCGTCTCGTCGTTGACTGACCCGGTTGCC CCCCGCCCCCCCAAAATAACCACGAAAAACGCCTACATCAACACCAGTAT GAACTTCGCCAGCCCCGAGGTACGAAAGGTGCGGCTCACGTACTTCGATG CGGGGGACAAGGTGCAGGTCCTGAACGCCGTCATCTACCCGGACCCGTCG CTAGACATGCCGCTGCTGGGGATAGATCTCATCTCCTTCGGAGGCAAGCA CCTGGCGGGGATCGACTTCCAGCCGCTGTTCGACGATGACTCTTGTCGTA ACCGGTGAGATTTTGAAACCGCTCGTTTTTCTAATGTGGAAGCCATGTTT ATTGAAGAGAAAGAATGGAAATCCGGACCATTCTACTGTTTCTGCGGCGA TTGGTTTGCCTTTTGCCCTACGGGTTCAAGTAGTAAAACACAGTTCGCTT GGTTGTTCTTATCGGGAGTGTTGCGTAGTCCCTAGTACAGGGGTGAGACT CGAACACTAACCGCCATGACGACAGCATGATGTTTCCCATGGACATCCCT TGTTCACTTGCGGGACGCGACGCCTGCATCCACGCACATGTATCGCATGC GGTGTTTAGCAGTGGTTCACAAACCCCTCCTCGATCACGTGGCGCGTCGT GTCCATGTCCCCCAGGTACTCGGACAAGCTCGCACCCATCAAGGCGAAGT ATCCGGAGTTCGCCCAGAAGATGTCGCCGCGCTTCTACGACAGCGCGCGA TTCTTCAGTGAGGAGATGCTCTTCGGAAGGTGAATGATCGTTGGTGGCTG ACTACCCCTCTCCCCCTCAACCCCAACACACGATCTTGTTGGTCTTGACT TTGCTTGAGACCCTTCCAGATGTTTCCTCTTCTGTGGTACTTGCTGCAGG ACTGCAGTACACATTACAGTTTCCCCCCCCCGTATGGGCTCAGCCCATCA CCCTCGTCTTTGACCACACACTTGCGGTCCGCCGGCGCATAGGCGCTATT CCTGAGATCTCTCTTGCGTAATACCCCCCCCTCCCCAAAAAAACACCACC TCAGATACGAAGATGAGGCCATTGTGGACGAAAAACTCTTCCCGGCGTTT GACGAGTACCTCTCGCTCTACATCTCCGACCTGCTCAAGGCCGCCGAGGA CGGCGGAAACCCCTCGCCGGAGGCCCGGGCGCGCGTGCTGGACCGCCACC GCGCGTACGACCAGTACAACGCGGAGCGGGACCCGGCGCACGGGCTGTTC CGCACCTACTTCGGCGAGGCGTACAGCGAAGACTTCATGGACAACTTCCT GTTCGAGCTGAGCACCAGACCGGCCGGTGGCTACCCCAAGGGCGCGGCTC GTGGGGGAGGGGGGGGCGCGAACGGCCGGCCAGCGGGAGGAGGGAACCCT CACGCGTAGTTCTGTTCCTTCCGTTTTTTGGTGAACGTGGTTTTTGTGGG GACGACGAGCGAAGATGTTGTCTTTTTTGCGCGGATTTGCGGTGTTTGAC GAGCGCTAGGGGTGGGGGGAGAGAGTGAAGGAATGCGATGTGATTTCTTG GCTGGGCGCATGCATACATTAAAGGAGAACCCGTTTTTGTAGCGTTTGGC TTGTTTTAGAAAG
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig9:1740251..1744263+

>mRNA_Ecto-sp6_S_contig9.18191.1 ID=mRNA_Ecto-sp6_S_contig9.18191.1|Name=mRNA_Ecto-sp6_S_contig9.18191.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1320bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:1740251..1744263+ (Ectocarpus species6 EcLAC_371)
ATGTCGCCGTCTCTGGCCGTAATGGGCGCCGAACCGCGATGTAACGAAAA
CAGCAGGAGCGGCGGGAGGAGCAGCACACGGGACGCTAGGTCATGCGGGG
GAGGGGGCAGCAGCTGGCGAAAGCAGGAGACGGGCGAGCAGCGGCGGCGA
GCGGGGAGCAGCACCCGGAGAAGGAGACGGACGCTTTGCGCGGTTTCCGC
CGTGATCGCCGGCTACGCAGCTGCCTCTCTGCCGTGCGGAGCGGGCTTCG
TGGCGCCAGGCGTGCAGCAGGCCGGCCGATCAGGTGCTGCTGCGGTACCC
TCGTATGTTCGTTCAGCAGCGCCGGGCGGGGGAGAGAGCAGGAGGGCAGG
AATGCGGCGAAGACGACCATCGGATGCCGTACACATGGTTGCAATGGAGC
CTCGCGTTAACTCGAAGGGCTCGGCGACGGAAACGGTGGCGCCGGCAAGG
CCTGCTGGCAAGGAGGGGCCGCACCTGCCGTGGACGGGGTCGATGGCGGG
CCCGGAGTTCCCCCTGACGTACATGCCGTTCATGGAGCACATGCTGAACG
TGCTGGCGCGCTCTTTCGGGGAGATGACGGCGCTGCCTCTAGCCGACAAG
CTGGCCTTCGTAGACAACACGGACAAGAAGGCCCGCATGTTGAGTATGAA
CTTCGCCAGCCCCGAGGTACGAAAGGTGCGGCTCACGTACTTCGATGCGG
GGGACAAGGTGCAGGTCCTGAACGCCGTCATCTACCCGGACCCGTCGCTA
GACATGCCGCTGCTGGGGATAGATCTCATCTCCTTCGGAGGCAAGCACCT
GGCGGGGATCGACTTCCAGCCGCTGTTCGACGATGACTCTTGTCGTAACC
GGTACTCGGACAAGCTCGCACCCATCAAGGCGAAGTATCCGGAGTTCGCC
CAGAAGATGTCGCCGCGCTTCTACGACAGCGCGCGATTCTTCAGTGAGGA
GATGCTCTTCGGAAGATACGAAGATGAGGCCATTGTGGACGAAAAACTCT
TCCCGGCGTTTGACGAGTACCTCTCGCTCTACATCTCCGACCTGCTCAAG
GCCGCCGAGGACGGCGGAAACCCCTCGCCGGAGGCCCGGGCGCGCGTGCT
GGACCGCCACCGCGCGTACGACCAGTACAACGCGGAGCGGGACCCGGCGC
ACGGGCTGTTCCGCACCTACTTCGGCGAGGCGTACAGCGAAGACTTCATG
GACAACTTCCTGTTCGAGCTGAGCACCAGACCGGCCGGTGGCTACCCCAA
GGGCGCGGCTCGTGGGGGAGGGGGGGGCGCGAACGGCCGGCCAGCGGGAG
GAGGGAACCCTCACGCGTAG
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