mRNA_Ecto-sp6_S_contig9.18190.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig9.18190.1
Unique NamemRNA_Ecto-sp6_S_contig9.18190.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
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BLAST of mRNA_Ecto-sp6_S_contig9.18190.1 vs. uniprot
Match: A0A6H5KJ37_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ37_9PHAE)

HSP 1 Score: 823 bits (2126), Expect = 5.260e-294
Identity = 410/457 (89.72%), Postives = 419/457 (91.68%), Query Frame = 1 
Query:   31 MAPKPTRRRSLTLAPLSVYLTLCAAFVQSPSFRLRGDSIARRHRASCCSSRGSGCWELRSSLGANGESNVGEGSEDEDASTYSFPDTLGQSAPVGVSPEKWERVLRSARETTLLSPNPEHPPSHVAAVTLQALRRTDVPYTNFGCEIAIRFSSTSNPASGFTPGGMRTYIDDPSMPFYRVLSDWDEMAPVAGAEIDVADPARANQQVRVRKEGDPAWSTVSMDFVKEDGCWLIERLWIDDKSVAGGRSGXXXXXXXXXXAPLSVAELFDEDRLEMMSCKYADYDPACLAAAGGGDWLEERPNPSLSPKAVALTCILSLRQNDDGSGSDAATDXXXXXXXXXXXXXXXXXXTGAGAKATKPRLNEGCERVIRFCSPTNVASTLTPAHFAQYLKEPWYAIFNQWDELSFHSEDISEDESTADLVVLLRPDSEEAWTSVNWELVKCDGMWLTERIWVVDV 1401
            M PK TRRRSLTLAPLS+YLTLCAAFVQSPSFRLRG+SI RR RASCCSS GSGCWELRSSLGANGESNVGE SEDEDAS YSFPDTLG+SAPVGVSPEKWERVLRSARETTLLSPNPEHPPSHVAAVTLQALRRTDVPYTNFGCEIAIRFSSTSNPASGFTPGGMRTYIDDPSMPFYRVLSDWDEMAPV GAEIDVA+P RANQQVRVRKEGDPAWSTVS+D VKEDGCWLIERLWIDD+SVAGGR+G       XX APLSVAELFDEDRLEMMSCKYADYD ACLAAAGGGDWLEERPNPSLSPKAVALTCILSLRQNDDGSGSDAATD                   GAGAKATKPRLNEGCERVIRFCSPTNVASTLTPAHFAQYLKEPWYAIFN+WDELSFHSEDISEDESTADLVVLLRPD+EEAWTSVNWELVKCDGMWLTERIWVVDV
Sbjct:    1 MVPKTTRRRSLTLAPLSIYLTLCAAFVQSPSFRLRGNSIVRRRRASCCSSSGSGCWELRSSLGANGESNVGEDSEDEDASIYSFPDTLGESAPVGVSPEKWERVLRSARETTLLSPNPEHPPSHVAAVTLQALRRTDVPYTNFGCEIAIRFSSTSNPASGFTPGGMRTYIDDPSMPFYRVLSDWDEMAPVGGAEIDVAEPDRANQQVRVRKEGDPAWSTVSLDLVKEDGCWLIERLWIDDRSVAGGRAGGGREASPXXPAPLSVAELFDEDRLEMMSCKYADYDSACLAAAGGGDWLEERPNPSLSPKAVALTCILSLRQNDDGSGSDAATDDSRRDGEAAGGDAAAT--AGAGAKATKPRLNEGCERVIRFCSPTNVASTLTPAHFAQYLKEPWYAIFNKWDELSFHSEDISEDESTADLVVLLRPDNEEAWTSVNWELVKCDGMWLTERIWVVDV 455
[Close]
BLAST of mRNA_Ecto-sp6_S_contig9.18190.1 vs. uniprot
Match: D8LGZ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGZ2_ECTSI)

HSP 1 Score: 535 bits (1377), Expect = 3.640e-183
Identity = 284/292 (97.26%), Postives = 286/292 (97.95%), Query Frame = 1 
Query:  526 MRTYIDDPSMPFYRVLSDWDEMAPVAGAEIDVADPARANQQVRVRKEGDPAWSTVSMDFVKEDGCWLIERLWIDDKSVAGGRSGXXXXXXXXXXAPLSVAELFDEDRLEMMSCKYADYDPACLAAAGGGDWLEERPNPSLSPKAVALTCILSLRQNDDGSGSDAATDXXXXXXXXXXXXXXXXXXTGAGAKATKPRLNEGCERVIRFCSPTNVASTLTPAHFAQYLKEPWYAIFNQWDELSFHSEDISEDESTADLVVLLRPDSEEAWTSVNWELVKCDGMWLTERIWVVDV 1401
            MRTYIDDPSMPFYRVLSDWDEMAPV GAEIDVADPARANQQVRVRKEGDPAWSTVSMDFVKEDGCWLIERLWIDDKSVAGGRSGXXXXXXXXXXAPLSVAELFDEDRLEMMSCKYADYDPACLAA GGG+WLEERPNPSLSPKAVALTCILSLRQNDDGSGSDAATD XXXXXXXXXXXXXX   TGAGAKATKPRLNEGCERVIRFCSPTNVASTLTPAHFAQYLKEPWYAIFNQWDELSFHSEDISEDESTADLVVLLRPD+EEAWTSVNWELVKCDGMWLTERIWVVDV
Sbjct:    1 MRTYIDDPSMPFYRVLSDWDEMAPVGGAEIDVADPARANQQVRVRKEGDPAWSTVSMDFVKEDGCWLIERLWIDDKSVAGGRSGXXXXXXXXXXAPLSVAELFDEDRLEMMSCKYADYDPACLAAEGGGEWLEERPNPSLSPKAVALTCILSLRQNDDGSGSDAATDDXXXXXXXXXXXXXXGATTGAGAKATKPRLNEGCERVIRFCSPTNVASTLTPAHFAQYLKEPWYAIFNQWDELSFHSEDISEDESTADLVVLLRPDNEEAWTSVNWELVKCDGMWLTERIWVVDV 292
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BLAST of mRNA_Ecto-sp6_S_contig9.18190.1 vs. uniprot
Match: A0A836CF69_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF69_9STRA)

HSP 1 Score: 234 bits (597), Expect = 1.760e-67
Identity = 139/314 (44.27%), Postives = 172/314 (54.78%), Query Frame = 1 
Query:  526 MRTYIDDPSMPFYRVLSDWDEMAPVAG-----AEID-------------VADPA-RANQQVRVRKEGDPAWSTVSMDFVKEDGCWLIERLWIDDKSV---AGGRSGXXXXXXXXXXAPLSVAELFDEDRLEMMSCKYADYDPACLAAAGGGDWLEERPNPSLSPKAVALTCILSLRQNDDGSGSDAATDXXXXXXXXXXXXXXXXXXTGAGAKATKPRLNEGCERVIRFCSPTNVASTLTPAHFAQYLKEPWYAIFNQWDELSFHSEDISEDESTADLVVLLRPDSEEAWTSVNWELVKCDGMWLTERIWVVDV 1401
            MR Y+ DP++PFYR+L++WDEM    G     A ID              AD A  A Q V VR+ GD  WSTV++   +E GCWLI+RLW+DD+SV   A    G  XXXXXXXX       +  +   E M C++ DYDP  L +     WLE+ P+  LSPK V L C+ +LR  D                                     P  N GC   IRFCSP N ASTLTPAHFA YL+EPWY I  QW E++FHSE+++ D S ADLVVLL+   +  WTS+NW L + DG+WLTERIWV DV
Sbjct:    1 MRRYLSDPALPFYRILAEWDEMDTRGGGLSLSASIDPTSTSTSTNGDAPTADAADSAYQAVLVRRTGDSTWSTVNLQMSREHGCWLIDRLWVDDQSVDPSARAAGGAVXXXXXXXXXXXXXXXMLADAANEAMGCRFGDYDPVQLVS-----WLEQDPSEELSPKMVVLNCLCALRAKDI------------------------------------PHRNAGCALTIRFCSPNNAASTLTPAHFAAYLEEPWYQIIAQWSEMAFHSEEMNADGSEADLVVLLKRQGDAEWTSMNWLLGRYDGLWLTERIWVDDV 273
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BLAST of mRNA_Ecto-sp6_S_contig9.18190.1 vs. uniprot
Match: A0A7S2XYB1_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYB1_9STRA)

HSP 1 Score: 140 bits (353), Expect = 5.280e-32
Identity = 112/432 (25.93%), Postives = 182/432 (42.13%), Query Frame = 1 
Query:  292 LGQSAPVGVSPEKWERVLRSAR----ETTLLSPNPEHPPSHVAAVTLQALRRTDVPYTNFGCEIAIRFSSTSNPASGFTPGGMRTYIDDPSMPFYRVLSDWDEMAPVAGAEID-------VADPARANQQVRVRKEGDPAWSTVSMDFVKEDGCWLIERLWID-DKSVAGGRSGXXXXXXXXXXAPLSVAELFDEDRLEMMSCKYADY--DPACLAAAGGGDW-LEERPNPSLSPKAVALTCILSLRQNDDGSGSDAATDXXXXXXXXXXXXXXXXXXTGAGAKATKPRL--------------------------------------------NEGCERVIRFCSPTNVASTLTPAHFAQYLKEPWYAIFNQWDELSFHSE-DISED-----ESTADLVVLLRPDSEEAWTSVNWELVKCDGMWLTERIWV 1392
            L  S P G+  E W+R+ R+A+    +     P+    P  VA + L+ALR       + GC++AIRF S+ NPAS   P  +  Y+ D  MP Y ++ +W+++   A  +         V D  +  QQV VR+ G+  WS V+ +FV+E+  WLI++LW++ D +    + G           P    E   + +      +  D+  + A +  AG G   +   P+  L+ +       +   + + G  S +++              XXXXX   G +   P                                              N GC+  I F +PTN A  + P HF  YL+EPWY+   +WD++    E  + E      +    + V L+  +E+  TS NWE+V CDG W+  ++WV
Sbjct:   11 LTLSKPSGMKQEDWDRISRNAKAKWKKFQAEQPSSTQTPREVAVIVLKALRNNHYSDQHQGCQVAIRFCSSENPASEMMPEDLAAYLADDRMP-YAIMCEWEDIDASADGDCSEVENMRRVPDGTQCQQQVFVRRLGEKGWSAVNFEFVRENSEWLIKQLWVNTDINSTSQQDGAQEGKARRSSPP--PREGRQKPKKNQRRTQPPDFRLNTAAVRGAGAGALAIPPAPSSPLTQEKTGKEAAVGGGEVEWGRTSSSSSSLEQSMLALGMRPAXXXXXXXTGTQTGGPLQWNPAFAEEMRSTDLMLLCPPEGGSPWTAVSNILLALRAVDTCGRNWGCQVAINFAAPTNPARDMDPEHFRSYLQEPWYSYLQEWDQMELEDEGQVVEGGGPNGQPIVHIEVSLKKQNEDHATS-NWEMVLCDGKWMVAKVWV 438
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BLAST of mRNA_Ecto-sp6_S_contig9.18190.1 vs. uniprot
Match: A0A7S0JII3_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JII3_9EUKA)

HSP 1 Score: 89.0 bits (219), Expect = 9.980e-17
Identity = 48/112 (42.86%), Postives = 63/112 (56.25%), Query Frame = 1 
Query: 1099 ATKPRLNEGCERVIRFCSPTNVASTLTPAHFAQYLKEPWYAIFNQWDELSFHSEDISEDE----------------STADLVVLLRPDSEEAWTSVNWELVKCDGMWLTERI 1386
            A +P    G E  +R+CSPTN AS L+P  FA YLKEPWY I   WDEL     D+ EDE                S AD+ VL+R   +++WT VNW+L + +G WLT+ +
Sbjct:   65 ANEPYPFHGAEVAVRYCSPTNKASLLSPQVFAAYLKEPWYEILTAWDEL-----DMDEDEDDVEANLAERWEQLRTSLADIDVLVRVRGDDSWTVVNWKLSRHNGRWLTDAL 171
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BLAST of mRNA_Ecto-sp6_S_contig9.18190.1 vs. uniprot
Match: A0A7S0JKP0_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JKP0_9EUKA)

HSP 1 Score: 86.3 bits (212), Expect = 1.580e-16
Identity = 45/109 (41.28%), Postives = 60/109 (55.05%), Query Frame = 1 
Query: 1123 GCERVIRFCSPTNVASTLTPAHFAQYLKEPWYAIFNQWDELSFHSED----------------ISEDESTA-DLVVLLRPDSEEAWTSVNWELVKCDGMWLTERIWVVD 1398
            G E  IRFCSPTN AS L+P  FAQYL+EPWY I  +WDE+     D                   DEST  +  VL++   +E+WT VNW+L +  G WLT+ + + +
Sbjct:    3 GAEVAIRFCSPTNAASRLSPRGFAQYLREPWYRILTEWDEMVLDDGDEXXXXXXXXXXXXXXXXXXDESTVVEQSVLVKRTVDESWTVVNWQLSRHSGRWLTDALTITE 111
[Close]
BLAST of mRNA_Ecto-sp6_S_contig9.18190.1 vs. uniprot
Match: A0A7S2NRG0_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2NRG0_9EUKA)

HSP 1 Score: 85.5 bits (210), Expect = 8.770e-14
Identity = 44/101 (43.56%), Postives = 57/101 (56.44%), Query Frame = 1 
Query: 1123 GCERVIRFCSPTNVASTLTPAHFAQYLKEPWYAIFNQWDELSFHSEDISEDE-------------STADLVVLLRPDSEEAWTSVNWELVKCDGMWLTERI 1386
            G E  +RFCSPTN AS L+P  FA YL EPWYAI  +WDE+    +D  ED              + A++  L+R   E  WT VNWEL + +G WLT+ +
Sbjct:  337 GAEVAVRFCSPTNKASQLSPQAFATYLNEPWYAILTEWDEMQIDEDDEEEDVEAALARRWDELRLNVAEVGTLVRRKGE-PWTVVNWELSRHNGRWLTDSL 436
[Close]
BLAST of mRNA_Ecto-sp6_S_contig9.18190.1 vs. uniprot
Match: A0A8J5XX53_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XX53_DIALT)

HSP 1 Score: 78.2 bits (191), Expect = 3.240e-13
Identity = 47/139 (33.81%), Postives = 72/139 (51.80%), Query Frame = 1 
Query:  319 SPEKWERVLRSARETTL-LSPNPEHPPSHVAAVTLQALRRTDVPYTNFGCEIAIRFSSTSNPASGFTPGGMRTYIDDPSMPFYRVLSDWDEMAPVAGAEIDVADPARANQQVRVRKEGDPAWSTVSMDFVKEDGCWLIE 732
            +P++W      A+     + P+    P  V  + L ALRR D PY ++G ++AI  S+ SN AS  +P     Y+ + S   Y + S+WDEM      +I  AD  RA Q+V VR+  D +W+ ++   VK  G W+ E
Sbjct:   13 APKRWTATDEPAQALPAEVLPSTARSPRDVIMLVLNALRRPDEPYDDYGPQLAIAHSAPSNGASQLSPVQFAKYLSEES---YVIFSEWDEMEIEDELQI-AADGQRAYQEVLVRRANDASWTHINWTLVKHAGMWMTE 147
[Close]
BLAST of mRNA_Ecto-sp6_S_contig9.18190.1 vs. uniprot
Match: A0A7S0EJH6_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EJH6_9EUKA)

HSP 1 Score: 77.4 bits (189), Expect = 5.860e-13
Identity = 36/99 (36.36%), Postives = 62/99 (62.63%), Query Frame = 1 
Query: 1105 KPRLNEGCERVIRFCSPTNVASTLTPAHFAQYLKEPWYAIFNQWDELSFHSE-DISEDESTADLVVLLRPDSEEAWTSVNWELVKCDGMWLTERIWVVD 1398
            +P LN G    +R+CSPTN AS+LTP  F  YL+EPWY +  +W+E+    E DI    +TA++ V  R D++++++ V++ L + +  WL + + + +
Sbjct:   53 EPYLNHGAALSVRYCSPTNGASSLTPEAFKGYLREPWYKLLLEWNEMELDDEEDIDSAGNTAEVDVQCRRDADDSFSIVSFRLSRHNARWLIDSLTITE 151
[Close]
BLAST of mRNA_Ecto-sp6_S_contig9.18190.1 vs. uniprot
Match: A0A7S3WL35_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3WL35_EMIHU)

HSP 1 Score: 71.6 bits (174), Expect = 1.540e-11
Identity = 38/101 (37.62%), Postives = 61/101 (60.40%), Query Frame = 1 
Query: 1105 KPRLNEGCERVIRFCSPTNVASTLTPAHFAQYLKEPWYAIFNQWDELSFHSEDISEDESTA----DLVVLLRPDSEEAWTSVNWELVKCDGMWLTERIWVV 1395
            +P  + G     + CSP N AS L+PA FA YL++PWYAI  +WDE+ F  +D  E+  TA    ++ VL+R   +E+++ V+W + + D  WL + + +V
Sbjct:    1 EPTKHHGAVVATQHCSPRNRASELSPAVFAGYLQDPWYAILAEWDEMEF--DDDEEEAETAVGEAEVQVLVRRGGDESFSMVSWLMSQHDERWLIDSLNIV 99
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18190.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A6H5KJ37_9PHAE5.260e-29489.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LGZ2_ECTSI3.640e-18397.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CF69_9STRA1.760e-6744.27Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2XYB1_9STRA5.280e-3225.93Hypothetical protein n=2 Tax=Fibrocapsa japonica T... [more]
A0A7S0JII3_9EUKA9.980e-1742.86Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
A0A7S0JKP0_9EUKA1.580e-1641.28Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
A0A7S2NRG0_9EUKA8.770e-1443.56Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
A0A8J5XX53_DIALT3.240e-1333.81Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
A0A7S0EJH6_9EUKA5.860e-1336.36Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
A0A7S3WL35_EMIHU1.540e-1137.62Hypothetical protein n=1 Tax=Emiliania huxleyi Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig9contigEcto-sp6_S_contig9:1732078..1740065 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size2435
Hectar predicted targeting categorysignal peptide
Exons9
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-14_001380.1
Cds size1374
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig9.18190.1prot_Ecto-sp6_S_contig9.18190.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig9 1733109..1740035 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350535.2434876-UTR-Ecto-sp6_S_contig9:1732077..17331081682350535.2434876-UTR-Ecto-sp6_S_contig9:1732077..1733108Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig9 1732078..1733108 -
1682350535.32934-UTR-Ecto-sp6_S_contig9:1740035..17400651682350535.32934-UTR-Ecto-sp6_S_contig9:1740035..1740065Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig9 1740036..1740065 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350535.2517087-CDS-Ecto-sp6_S_contig9:1733108..17332161682350535.2517087-CDS-Ecto-sp6_S_contig9:1733108..1733216Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 1733109..1733216 -
1682350535.266734-CDS-Ecto-sp6_S_contig9:1734454..17345531682350535.266734-CDS-Ecto-sp6_S_contig9:1734454..1734553Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 1734455..1734553 -
1682350535.27467-CDS-Ecto-sp6_S_contig9:1734967..17352071682350535.27467-CDS-Ecto-sp6_S_contig9:1734967..1735207Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 1734968..1735207 -
1682350535.2825925-CDS-Ecto-sp6_S_contig9:1735653..17358691682350535.2825925-CDS-Ecto-sp6_S_contig9:1735653..1735869Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 1735654..1735869 -
1682350535.2905884-CDS-Ecto-sp6_S_contig9:1736491..17365841682350535.2905884-CDS-Ecto-sp6_S_contig9:1736491..1736584Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 1736492..1736584 -
1682350535.2982352-CDS-Ecto-sp6_S_contig9:1736846..17369431682350535.2982352-CDS-Ecto-sp6_S_contig9:1736846..1736943Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 1736847..1736943 -
1682350535.3059394-CDS-Ecto-sp6_S_contig9:1737360..17374881682350535.3059394-CDS-Ecto-sp6_S_contig9:1737360..1737488Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 1737361..1737488 -
1682350535.3142104-CDS-Ecto-sp6_S_contig9:1738194..17383311682350535.3142104-CDS-Ecto-sp6_S_contig9:1738194..1738331Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 1738195..1738331 -
1682350535.3217554-CDS-Ecto-sp6_S_contig9:1739779..17400351682350535.3217554-CDS-Ecto-sp6_S_contig9:1739779..1740035Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 1739780..1740035 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig9.18190.1

>prot_Ecto-sp6_S_contig9.18190.1 ID=prot_Ecto-sp6_S_contig9.18190.1|Name=mRNA_Ecto-sp6_S_contig9.18190.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=458bp
MAPKPTRRRSLTLAPLSVYLTLCAAFVQSPSFRLRGDSIARRHRASCCSS
RGSGCWELRSSLGANGESNVGEGSEDEDASTYSFPDTLGQSAPVGVSPEK
WERVLRSARETTLLSPNPEHPPSHVAAVTLQALRRTDVPYTNFGCEIAIR
FSSTSNPASGFTPGGMRTYIDDPSMPFYRVLSDWDEMAPVAGAEIDVADP
ARANQQVRVRKEGDPAWSTVSMDFVKEDGCWLIERLWIDDKSVAGGRSGG
GGQVSPPPPAPLSVAELFDEDRLEMMSCKYADYDPACLAAAGGGDWLEER
PNPSLSPKAVALTCILSLRQNDDGSGSDAATDDSGGDGEAAAAGGDAAAT
TGAGAKATKPRLNEGCERVIRFCSPTNVASTLTPAHFAQYLKEPWYAIFN
QWDELSFHSEDISEDESTADLVVLLRPDSEEAWTSVNWELVKCDGMWLTE
RIWVVDV*
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mRNA from alignment at Ecto-sp6_S_contig9:1732078..1740065-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig9.18190.1 ID=mRNA_Ecto-sp6_S_contig9.18190.1|Name=mRNA_Ecto-sp6_S_contig9.18190.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=7988bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:1732078..1740065- (Ectocarpus species6 EcLAC_371)
GCAGCGGGGCACGCTTGCACGGCGGGGGTTATGGCTCCGAAGCCCACGCG
AAGACGAAGCCTCACGCTGGCGCCTCTGAGCGTATACTTGACTCTGTGCG
CTGCCTTCGTGCAATCGCCATCGTTTCGACTGCGGGGGGATTCCATCGCC
CGCCGGCACCGGGCTAGTTGCTGCAGCAGCCGTGGGAGCGGCTGCTGGGA
GCTGCGCTCGTCCTTGGGAGCAAACGGCGAGAGCAACGTCGGAGAGGGCA
GCGAGGACGAAGATGCGAGCACGTACTCTTTCCCAGGTAACCGTGGCACG
CTTCGGTATTGTTACAGTTTTCTCTGTCTCCAAAGTCTCAATGTACTTCA
CACACACAACACACAACACACGTACATTTGTACATGTCATCAGGGTGTGG
TTTGGGGACGGTTGCGGTAAACAGACTGATGCCAGGACCCCAAAAGGATG
ACGTTGCACAACACAACGCCAACTCACGCTTTTTTTTCATTTCCCCACGA
CAACAGCAGTGTTCAACTCTGGACGATTGGATCGGATGAGGCCGCCTCCG
CGTCTAACTTTTACCGTTGGAATGGAGGCATCGGCGGCATGTTTTCTGGT
ATTTTCGACCAAGAACACCCAAGTGCAACCAAGTACAACCACCCTGGTCT
CTTTGGATCAGCATAGTTTACGTAACCGCCCTCTTTGCCATGAGATCAAA
CGCACAGCTCACGCGCGTCTACAAATATCCTGCTGAATGATTGCAAGGCT
TACATTTTCTTTTTGGGGGGGTGACCAGGGACCGTCGGCAAAAATGATCA
TCCGCACCGTGTGTATCCCTCCGACTGCGGGAGGAAAAGAGGAGACAAGA
CCAGCGAACAGGTTGCTTGGTCGCTGTTTGGACCCACACGAGAGGAGCAC
TTATTGCTGCGGCAGGAGGATCTGTGCTTCGCACAGCGTTAGGGTGTAAC
GTACAGCAGGCTTAAAAAGGAAGATGATGGAGCTGCCGAGAGACCACGCG
CACACGCCCAAAGTGCGGCAACGGGGAACGGGCTGCCCGCATTCGATGCT
TTCCCCGTGCATCAGCCGCGCGCGAACCGCTCCCACTAGTGCGAATGTTG
ACAAAGGGTATGCAAGACAATAGCAACTGTACGAGCGGCCGAGATGTCGA
CACAAACGGCTGCCATAAAGCAGCGGTACCGATATAGCAGTGGCCATCCT
TGCCTCTCTCAATGGTTGCGGTCGCCTACAGTACCGGCAAATACGAGGTG
GCTTGTGTATTTGTTCGCTACGACGCCATTCATGCAGAAAAACACGCACT
TTAGGCCAATGTGCGCGAAGCGCGCTGGTCACAAGGTCTCCCAAATGGCA
TTTCGTCCATTTTTTCCAGCAAAGATATGTCAATACCGGAAAGTGCCCTT
GTATTCCTTCCTCGCTTCGAAGTTTCCCCGGGCGGCTGACACTTTTTTTG
CGTACAGTACTGTAATTCCGGCCAAAACTAAAGGTATACGAGTAGATATT
GTAGTCCTCTCTTCGCCTCGACTTGAGAACCATTTCTCAGTAAGGTTCGT
GAGGTGTTTGCGCCTACGATAGTCGGCCTATGATTACCGCTGCGTCTGCT
GTGTCGTTGACATGCGTCTCAGGAAAAATAGTCTTGATATCTGCTTCGAC
TCTGCTGCGCCAACCCCGTACTGTATCGTCGTCTACATATTCGTCAACAG
CCCAAATTTTGTTTTTTTTTGTGTTGATGTACAGATACACTCGGACAGAG
CGCTCCGGTTGGCGTGTCCCCCGAGAAATGGGAGCGCGTGCTGCGGTCAG
CACGGGAGACCACCTTGCTGTCACCGAACCCGGAACACCCGCCGAGCCAC
GTGGCTGCCGTAACGCTGCAGGTTTGCTGAGTTTCGCACGATATCACGTC
ATTCTCGGTGATTATTGGTTTGTGCTCTCGTTGCTCCAGTAGGAAGATGC
ACTTTTGTTCCTCCCACACTCACTCGACTAAGTGTGTGTTTCACGTGCTC
TCGCCCCTGGAAGATTCGGTGGGGTATTAGCATTGAACGAGCACATGGCA
CATTTGGCCGCAAAGCACAGCGTGCTGCTGCCGTCGTGTATTTTCTTCTA
GTTGTGTGTGCCACGGGAAGCAGGCGACTGCCGTCGCCCCGTAGGTTACT
TTTTTCTCCAAGCACGACGCGATCCAGCGTTGATTTCCGCGTCTCGCGGG
CGCGGTGGTGCACCCGCAGCCTCTCCGCCCGCCAGCACCCCAGCTCACCG
CCATCCACAGCAACCACGAAACCCCTCGGTACATTTGATTGAGCCTTTAG
AGAACGAAATCAAACCAGTAGACTAGTCAGCGCACGAAAAAATTCCTCCG
CATGTTATCGATTGAGCCTTTTGAAGCCGCAACCAAGCCATTGGACCATC
AGACTCTGACTAGTCTCATGGTTTGATATCAGAGTCTGAAGAAATTAGTC
GTGGGATCCGGATGACCCGACACTCTCACTCCTAGGGGGGTGACTCCCAC
TATGCTTCTACTGCTGTCGATGGATGAGGCAAACGAAACCCGTGACGCAC
CTCCGCCACCGCGGGTGTGACTGACAGGCTCTGAGACGTACCGACGTGCC
GTACACGAACTTCGGCTGCGAGATCGCGATCCGGTTCTCCAGCACGTCCA
ACCCGGCCTCGGGCTTCACGCCAGGGGGCATGCGCACCTACATCGATGAT
CCAAGGTTCGAAGTTTTGGTGGTTTAGCACCGAACTGAACTAAATACACA
AACGGGCGACTATCAAAATTGAGATTAACGGCGGAAAAATCGGGGTGAAA
GGTTGCGTGAATGCAATCTTGTTGGGGGTTGTTTTCCAGATTTGACAAAC
GCAGTTTGTTCTGTTCTGTTATCGCGTGGCTCGCGAGAGAGCCGTGCCGT
GACTCAAAAAGTAAAACACTTGCTCCGCCTATCCGAAAGAGGTGGAATAG
TGCAACAAGATACCACCGTTCTCTTCTCTTCACCCTATCCCTCACCTCTG
TTTTGCTTTTCTTCCCCTTCATCGGTCCCCCTCGCTCCTGGTCGTCTTGG
TCGTTTGCACACGCAATCCCCAGCCCCCACCCCCCACCCCACCCCTTGCC
ACCGACGAAATCCCCCGAACAGCATGCCCTTCTATCGAGTCTTGAGCGAT
TGGGACGAGATGGCGCCGGTGGCGGGTGCCGAGATAGACGTCGCGGACCC
GGCCAGGGCTAACCAGCAGGTGGGCGAAACCGCCTTCCTCTCTCGCGTGG
AGTGCGCCCAAGACTCTGTCACTCGGTGCCCGCCCCGCCGCCCACTCGCG
GATCCTCTGGGTTTCCATTAGATACGACAGGCGTTCGTATCAGACCGTGA
GTCGGGTGGGTGATGTTAATGTTGCCGTTCTTCTTGGCTGCTCCTACTCC
TTCGGACCCGTTGACCATTCTTGTCTACACCTCCTCCGATTGTGCGGGGG
CCCCATTTTCCTGGTGTAACGGCATCGGTAGGTTCGCGTGAGAAAAGAAG
GAGATCCGGCCTGGAGCACGGTGTCCATGGACTTCGTTAAGGAAGACGGG
TGCTGGCTTATCGAGCGTCTGTGGGTGAGTCGCCGCCGCTCTCTCGGAGT
CATTCTTGCCTCGACGCCACGCTGCTGGTTGAACGCAAATGAGAGGAGTG
TAGCGTGACTGTGAATGTCAGCGGTCTACGTCCCAAGGTAGTAAGAATTG
GCACGGTAGCCGAGGGGGTGGACGAACATGTGTACCGTTGACGCGCTAAT
TCTTGAATCACCGACGGACTGCCCCATCCCCGTCGGTGCTTGTTGTTTTT
GCTGGTCCGAGATGGTGGTTTTGAACTAATCAGCGACCGGCGTTGACTCG
CGTACAGTCTCACAATCGGACGCTCGTCGTGAAATATGAAAAACTGTTTG
GCCCTTCCACTGGCTTGGCGGCGCTTTCAACTTTTCGGTCCTGTTTTGGA
CCACATGCAAGTCACAATCGGCATGCGGCCAGCGATATGACACAAGCACC
GGCATCGGCCCTGGTTCCAAACCGGGAGTACCACCGCTTGCTCCTTTTCT
CAAACGACGACCGCCCACCCCCCCCACCCCCCTTCCCCGTCCTCTCGAGG
ACGCCTGATCAATGATCTAACAGCTAAGGCAAGAAAAACATAAGACTACG
CCCCCTCTTACCTAACCATGCGATACGCGCGTGGGCTTCAACAAAGATTG
ACGATAAGAGCGTTGCCGGCGGGCGGTCGGGTGGGGGAGGACAAGTGTCG
CCGCCGCCTCCGGCCCCTCTTTCGGTGGCGGAGCTGTTCGACGAGGACCG
CCTGGAGATGATGTCGTGCAAGTACGCCGACTATGACCCGGCCTGCCTAG
CGGCAGCGGGAGGGGGGGACTGGCTGGAGGAGCGGCCGAACCCTTCTTTG
TCTCCGAAGGCGGTGAGAGAGGACGGAGACGGGCGTCGGTCAACTCCCTC
GTTCCCCTTGGGCTCGTTATTGTTTTGGGTACTGGGGGCGGGTAGGGCGA
GTGCAGGTGTTGCTGCACTCATTTGTCTTTTTGCTCTTTTTTCGGGCGAC
TTGGTTGGCCCATATGAACAGGGTGGTTCTTGTGGCTGCTGCCGTGTGGT
AGATTGCACGGTGCGCTGCCGGGGGATCCAGGCGAGAGGGAGGCGGTGTT
GTTCGTTCGTGTGCGTTGAGAGCTGAGGACACGCGTGACTTGTCGCTGCC
CGCCATCGCAAAGCGACGGGAGACAATGTCAAGAAGCAGTAAATAGGTGC
AGCCGGTCCGCTTTTCGACCTCTCTCTCGCCGACGTGATATTAAATAGTA
CTTGAGACGACTTTCGGAGTTTAAACCCCGTGCTGGCTGGGATCACTCGT
GCATCCAGGTGGCCCTGACGTGCATCCTTTCGCTGCGCCAAAATGACGAC
GGGAGCGGCAGTGACGCCGCCACCGACGACAGCGGTGGGGATGGAGAGGC
GGCCGCGGCCGGCGGAGATGCCGCGGCGACGACAGGGGCGGGGGCGAAGG
CGACGAAACCGCGATTAAATGAGGGCTGCGAACGCGTGATTAGGTTCTGC
TCGCCCACCAACGTCGCTAGCACGCTCACGCCGGCGCACTTTGCTCAGGT
AGACCGAGTGGCAATCGCACCGCACCAGCAGCGACCACATGTGGTACGGT
GGGGGTCCGGTCCCTCAATGGTGCCGGTTGAACAGGGCCACTGCCCTTGG
AATAGAACCGGTGAATCTGGCGGGTGCCCCAAGGCACTATTGAGGGACCT
TCGTCGTGCCTAGGAAAGTGCTGGTAGGGTAGGGTTTGGGCAAGGGCTCG
GATGCCAACTGATCGGCGCGTTGAACGGTCTTGAGAACTGTCTTTTAAGG
CTAGGCAAGGCGACCGAAACGAAGGGAATACTGCTGTATCTCCCCGTCCG
TGGCGTTTCGTTTTGCCACCCTTGAACGTTTCGTCGTTTTCCTTCCGTCT
TAAGTGCACCCATCTAAAATGAGTTTGTATACCCATCCCAACAAACACTT
ACTGAAAACCAGTATCTCAAGGAGCCGTGGTACGCCATCTTCAACCAGTG
GGACGAGCTGTCGTTTCACAGTGAGGACATTTCGGAAGACGAGAGCACCG
CGGATCTCGTGGTGAGTTATCGTGTGTGTGTCGGGGGGGGGTGTACTCAT
TGTCGTGCATGCCGTAGTCGTCAGACCATTGACCTCGCATCCCTACAAAG
CCGGGACGGAGCACGCCGGGTTCTCACCGGACCAGGCTCTCACATCACCA
AGCGCGAAGCCCCGTGAGGTATTTGGCGAGTCGTATGAAGGGTGAGCTGC
ATCCTGCTACGGGTGTTCGGCATCTTGTGCTTACTTCCTTGCGTACGGAT
GACAGCTACGTATGACTTAATTTACTCTCCGGTGCTTTCACTTCCAGAGA
CAGTTGTAAGCACTGTGTAACTGCCTCGAGGGTGCTTGACCATTTTAACA
CAACGTGGTGCGATCATCCCCCTTGCGCGGAGTGAGGGTTCTCGACCCCG
CACAACATGATCTACTCGACCACCATTATGGTTACCGCCAAAAAAAAAAC
CGAGGTAAAAAAAAACCGGTAACCTGGTTGCCGAGTTCACGAAGTGAATT
GGCTTGTTTTACAACGTCGTTGCCAAGCGGCTTGTTTTACAACGTATGAA
AAAAACCCAATCCCGATGGCAAAACACCGGGGGGGGGGGGGGGAGGGAAA
GCGCTGACCGTCGTGTCCCCTCGGTCCGGGGCACGGAGCAAGCAAGCACG
AAGGGCTTGACCTCGCATCGTCTCAGGCAATGAAATTCACTGGTCGCTCC
ACATGTACGAAAATCATGTACATATGAATGTGAAGACAAACAACAACAAC
AACAACAACAACAATAATACGGCAGATTCTCAACCGAGATACATGCCTAA
CCAATACCCCAAAGGCCGTTCTTGGCGCGTCGGGCGTAGAGAGCACTCAA
ACGTTGGAGGCGCTCCACAGGTTGGGAACTACGCTCAGAAAGGTTCTAGG
AAAGGGGCCCCCTAATAACTGAGATAAGACTGGTGTACAAGTACGGAATT
GCTTATCTTTCTTTTTTGGCTCGCGTAGGGTCGCCGGGCTGTTGGAGTCA
AGCACGTGAGCTGTGTGACCCGTTCGAGCTCGGGAAGCGTCACAGCTGGC
AGCTAAATAGCTTGCTGTCGGCTGGTCCTGCTGCCTTCTTGTTTTTTCAT
CTTGCGTCACCCCTCCATGACACTGCTGTTCTTTCACTAGCCCCGCTACG
GAGGGATCACTGGTACAAAAAAAAGAAAGAGACATACCGCAAGGCATCCG
ATCCGCACTCCCCCCCACTCTTGCTTATGTCATCTGTCGTCCCCCCAAGG
TTCTATTGCGCCCCGATAGCGAAGAAGCGTGGACTTCGGTGAACTGGGAG
TTAGTCAAGTGCGACGGCATGTGGCTCACAGAGAGAATATGGGTGGTAGA
TGTCTAAGCTCGCCAGCAGCTGATGTTGCCGTTGACGGCGATGATGGCGA
CGGCGATCGATTGGTTTCCCCTCCGAAGCGCATGCTTCACCAAAGGCAAT
GTTGTGTAGTGTTGTGGGGGTTGTTGTGTTTTCTCTTTGCGCGGTTTTTA
CATGCCACAGTCTTTAGTTCGGTGCGTGTGGGCCCGTTTCGGTTACGTTT
GCCGTTTCTGTTGCGTTGTGGTGGAAAAGTATGAATGCCTGGGCGTCGTG
GGGGTGAATGTTTGTCAAGGGTGTGAAGTGCGCGTGCTCTCCAGAGTGCG
AGCAAACGCATCGTTTTTGCTACGATGTTTTCATGTTTCGTGGATCACAG
CAGTAGCTATAGTAGTGTTGAATGAGGGGTGCATGTGAGGCCGAAGCAAG
CGTTCGGACATGACGATCTCATCATACAGCGCACCTCTGCTTCATAGGTG
AGCAGAATACAATTACAGTTTTTTACAGTTTTTTGATGCAGCCCCGCTGT
TGATTTGTCTGAGGTTGGATTGGGTCTATACTGATGCGTACGGTGCTGGT
GCCAACAACCAGCGACGAAATTGCGGGGGGGGGGGTCTCTCTTGAATGAT
GTAAATAAACAGGTCCGCCAACCTTTGGAAGTATGGCTTGTGTATCGTAC
AGTATACTGCTTGTAGCGGTTGTCTTCCTTGTCTATGTCCAGTAGAACAA
CAACTTTTTGCGGGCCTTGTTGGGCTACCTTCATGGCAACAGCAGGAGTG
TCTCTCTCCTGTTGTTGATGCACGACAGTAGATTTTTTTACGATGTGGGT
GCCACCGGGCGGCCTCTTTGATTGGGTCCATCTCAGGCAGGCGTCGTCCA
GACGTTTCGTTGTTGTCTATTTCCACTAGGACGTAAAGAGCCTGAGTTGC
CCTTCTTTTTGGATATGCGGATGTCGAAACACGTCTGTCTTCTCTTGTGT
TGTTCTGAGATTGCTTTATACGTGTGTCGAGATACGGGCTGCCTCGTCCC
AACTACTCACTGTCTGTACAGCGTGCGGAAACTGCAGC
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig9:1732078..1740065-

>mRNA_Ecto-sp6_S_contig9.18190.1 ID=mRNA_Ecto-sp6_S_contig9.18190.1|Name=mRNA_Ecto-sp6_S_contig9.18190.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1374bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:1732078..1740065- (Ectocarpus species6 EcLAC_371)
ATGGCTCCGAAGCCCACGCGAAGACGAAGCCTCACGCTGGCGCCTCTGAG
CGTATACTTGACTCTGTGCGCTGCCTTCGTGCAATCGCCATCGTTTCGAC
TGCGGGGGGATTCCATCGCCCGCCGGCACCGGGCTAGTTGCTGCAGCAGC
CGTGGGAGCGGCTGCTGGGAGCTGCGCTCGTCCTTGGGAGCAAACGGCGA
GAGCAACGTCGGAGAGGGCAGCGAGGACGAAGATGCGAGCACGTACTCTT
TCCCAGATACACTCGGACAGAGCGCTCCGGTTGGCGTGTCCCCCGAGAAA
TGGGAGCGCGTGCTGCGGTCAGCACGGGAGACCACCTTGCTGTCACCGAA
CCCGGAACACCCGCCGAGCCACGTGGCTGCCGTAACGCTGCAGGCTCTGA
GACGTACCGACGTGCCGTACACGAACTTCGGCTGCGAGATCGCGATCCGG
TTCTCCAGCACGTCCAACCCGGCCTCGGGCTTCACGCCAGGGGGCATGCG
CACCTACATCGATGATCCAAGCATGCCCTTCTATCGAGTCTTGAGCGATT
GGGACGAGATGGCGCCGGTGGCGGGTGCCGAGATAGACGTCGCGGACCCG
GCCAGGGCTAACCAGCAGGTTCGCGTGAGAAAAGAAGGAGATCCGGCCTG
GAGCACGGTGTCCATGGACTTCGTTAAGGAAGACGGGTGCTGGCTTATCG
AGCGTCTGTGGATTGACGATAAGAGCGTTGCCGGCGGGCGGTCGGGTGGG
GGAGGACAAGTGTCGCCGCCGCCTCCGGCCCCTCTTTCGGTGGCGGAGCT
GTTCGACGAGGACCGCCTGGAGATGATGTCGTGCAAGTACGCCGACTATG
ACCCGGCCTGCCTAGCGGCAGCGGGAGGGGGGGACTGGCTGGAGGAGCGG
CCGAACCCTTCTTTGTCTCCGAAGGCGGTGGCCCTGACGTGCATCCTTTC
GCTGCGCCAAAATGACGACGGGAGCGGCAGTGACGCCGCCACCGACGACA
GCGGTGGGGATGGAGAGGCGGCCGCGGCCGGCGGAGATGCCGCGGCGACG
ACAGGGGCGGGGGCGAAGGCGACGAAACCGCGATTAAATGAGGGCTGCGA
ACGCGTGATTAGGTTCTGCTCGCCCACCAACGTCGCTAGCACGCTCACGC
CGGCGCACTTTGCTCAGTATCTCAAGGAGCCGTGGTACGCCATCTTCAAC
CAGTGGGACGAGCTGTCGTTTCACAGTGAGGACATTTCGGAAGACGAGAG
CACCGCGGATCTCGTGGTTCTATTGCGCCCCGATAGCGAAGAAGCGTGGA
CTTCGGTGAACTGGGAGTTAGTCAAGTGCGACGGCATGTGGCTCACAGAG
AGAATATGGGTGGTAGATGTCTAA
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