mRNA_Ecto-sp6_S_contig9.18182.1 (mRNA) Ectocarpus species6 EcLAC_371
|
Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig9.18182.1 vs. uniprot
Match: A0A6H5KLG6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLG6_9PHAE) HSP 1 Score: 624 bits (1610), Expect = 1.620e-217 Identity = 426/704 (60.51%), Postives = 429/704 (60.94%), Query Frame = 1
Query: 1 MPTQIAQMEMDQPVELIHQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPAAVPTDDAGAESGSESRHDTRQESLAQDPDSAIKFLVPNFQAGSLIGKKGATIKDIQLKASCMVRIATSGMYYPGTMERAVLVAGETEGVKQACGLILHTLHVPDNNESGCAKLVSQEKAEAIEVTQRLLIPLTAGGLVIGRRGANIAALLAASGAKVTLGQKADVKVHERLVTVQGKLTSATKAVEMLVDKLVEEPVLSRFANLSVNYRGHGTSHSKAAMAAGIVPAPLPYQRAPRDPSTPQKAASDAGTEPDTVAAAXXXXXXXXXXXXXXXXXXXXXXTPVMIGSS-----------------------------------------------------PQQ-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QQLGMFPMEPMTNPVAAAIASCQPTTTVTVGVPNNMIGAILGPGGAIISELQALSGARINVSQRDAFMPGTENRILTITGGPQATQTAQYLVSQKIEAFVQRPRGW 1374
MPTQIAQMEMDQPVELIHQQ XXXXXXXXXXXXXXXXX SPAAVPTDDAGAESGSESRHDTRQESLA+DPDSAIKFLVPNFQAGSLIGKKGATIKDIQLKASCMVRIATSGMYYPGTMERAVLVAGETEGVKQACGLILHTLHVPDNNESGCAKLVS+EKAEAIEVTQRLLIPLTAGGLVIGRRGANIAALLAASGAKVTLGQKADVKVHERLVTVQGKLTSATKAVEMLVDKLVEEPVLSRFANLSVNYRGHG+SHSKAAMAAGIVPAPLPYQRAPRDPSTPQKAASDAGTEPDT AAA XXXXXXXXXXXXXXX TPVMIGSS PQQ QQLGMFPMEPMTNPVAAAIASCQPTTTVTVGVPNNMIGAILGPGGAIISELQALSGARINVSQRDAFMPGTENRILTITGGPQATQTAQYLVSQKIEAFVQRPRGW
Sbjct: 1 MPTQIAQMEMDQPVELIHQQEDDEQRSNSEVMDVEVQXXXXXXXXXXXXXXXXXPS--SPAAVPTDDAGAESGSESRHDTRQESLAEDPDSAIKFLVPNFQAGSLIGKKGATIKDIQLKASCMVRIATSGMYYPGTMERAVLVAGETEGVKQACGLILHTLHVPDNNESGCAKLVSEEKAEAIEVTQRLLIPLTAGGLVIGRRGANIAALLAASGAKVTLGQKADVKVHERLVTVQGKLTSATKAVEMLVDKLVEEPVLSRFANLSVNYRGHGSSHSKAAMAAGIVPAPLPYQRAPRDPSTPQKAASDAGTEPDTAAAAAAAASPXXXXXXXXXXXXXXXVTPVMIGSSVTSSPATSATGRRITSPPRLSSSSPRRTARGARGGGRMVGRGFGSGNVGNRFQPQQFRQQHQQXXXXXXXXXXXXXXXXHQFYRQQSGSMQXXXXXXXXXXXXXXXXXXXXXXXXHQQRLPMSPASIAPPTPXXXXXXXXXXXXXASMVVSLPMGPGGPMVSSPMQMAPMGPMSHPSATAPVYTMSYAPAPAGNLYHQGGMQAAPSMPGPVATVGGDGQPRGYPAMAVPPQXXXXXXXXXXXXXQQLPRQQLGMFPMEPMTNPVAAAIASCQPTTTVTVGVPNNMIGAILGPGGAIISELQALSGARINVSQRDAFMPGTENRILTITGGPQATQTAQYLVSQKIEAFVQRPRGW 702
BLAST of mRNA_Ecto-sp6_S_contig9.18182.1 vs. uniprot
Match: D8LGY3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGY3_ECTSI) HSP 1 Score: 407 bits (1046), Expect = 4.420e-138 Identity = 263/266 (98.87%), Postives = 263/266 (98.87%), Query Frame = 1
Query: 22 MEMDQPVELIHQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-SPAAVPTDDAGAESGSESRHDTRQESLAQDPDSAIKFLVPNFQAGSLIGKKGATIKDIQLKASCMVRIATSGMYYPGTMERAVLVAGETEGVKQACGLILHTLHVPDNNESGCAKLVSQEKAEAIEVTQRLLIPLTAGGLVIGRRGANIAALLAASGAKVTLGQKADVKVHERLVTVQGKLTSATKAVEMLVDKLVEEPVLSRFANLSVNYRGH 816
MEMDQPVELIHQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SPAAVPTDDAGAESGSESRHDTRQESLAQDPDSAIKFLVPNFQAGSLIGKKGATIKDIQLKASCMV IATSGMYYPGTMERAVLVAGETEGVKQACGLILHTLHVPDNNESGCAKLVSQEKAEAIEVTQRLLIPLTAGGLVIGRRGANIAALLAASGAKVTLGQKADVKVHERLVTVQGKLTSATKAVEMLVDKLVEEPVLSRFANLSVNYR H
Sbjct: 1 MEMDQPVELIHQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPAAVPTDDAGAESGSESRHDTRQESLAQDPDSAIKFLVPNFQAGSLIGKKGATIKDIQLKASCMVGIATSGMYYPGTMERAVLVAGETEGVKQACGLILHTLHVPDNNESGCAKLVSQEKAEAIEVTQRLLIPLTAGGLVIGRRGANIAALLAASGAKVTLGQKADVKVHERLVTVQGKLTSATKAVEMLVDKLVEEPVLSRFANLSVNYRSH 266
BLAST of mRNA_Ecto-sp6_S_contig9.18182.1 vs. uniprot
Match: A0A836CIW2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIW2_9STRA) HSP 1 Score: 216 bits (550), Expect = 2.050e-62 Identity = 149/380 (39.21%), Postives = 198/380 (52.11%), Query Frame = 1
Query: 232 HDTRQESLAQD---PDSAIKFLVPNFQAGSLIGKKGATIKDIQLKASCMVRIATSGMYYPGTMERAVLVAGETEGVKQACGLILHTLHVPDNNESGC---AKLVSQEKAEAIEVTQRLLIPLTAGGLVIGRRGANIAALLAASGAKVTLGQKADVKVHERLVTVQGKLTSATKAVEMLVDKLVEEPVLSRFANLSVNYRGHGTSHSKAAMAAGIVPAPLPYQRAPRDPSTPQKAASDAGTEPDTVAAAXXXXXXXXXXXXXXXXXXXXXXTPVMIGSSPQQQQLGM-FPMEPMTNPVAAAIASCQPTTTVTVGVPNNMIGAILGPGGAIISELQALSGARINVSQRDAFMPGTENRILTITGGPQATQTAQYLVSQKIEA 1350
H+ SL D P A+K LV N AGSLIGK G TI+++QL++ +V+++TSGMY PGT +R VLV G+ VK AC L+LHT+H + C A L + +A+EVTQRLLIP +AGGLVIGR G+NI L +SGA+V+L QK ER+VT+ G L + ++ML+D L EP + + NLSVNY +H A AA +A G D A P + P+ L M T+PVAAA+A TT+TV +P+NM + SGARINVSQR F+PGT NR +TITG P A Q AQ+L++ +I+A
Sbjct: 32 HEDVDSSLRADKGVPPCALKLLVSNNMAGSLIGKAGQTIQNVQLQSGAVVKVSTSGMYLPGTQDRVVLVTGDLPRVKAACALVLHTVH-EQGRDRDCGVPAPLDIGTERDALEVTQRLLIPASAGGLVIGRGGSNIKGLSESSGARVSLSQKQTSPSSERVVTIGGSLGACRLCIDMLLDTLKREPAAAVYTNLSVNY-----AHPPAGAAAAXXXXXXXXXTG---------SAEATGISVDRHARQPL---------------------PPLPTYPPEMLDLIQPLNMPAPTHPVAAAVAGAAAVTTITVSIPDNM----------------STSGARINVSQRGDFIPGTSNRTVTITGSPAAAQAAQFLITHRIQA 359
BLAST of mRNA_Ecto-sp6_S_contig9.18182.1 vs. uniprot
Match: A0A3B4YXF0_9TELE (RNA-binding protein Nova-1-like n=1 Tax=Stegastes partitus TaxID=144197 RepID=A0A3B4YXF0_9TELE) HSP 1 Score: 167 bits (424), Expect = 8.210e-44 Identity = 118/368 (32.07%), Postives = 183/368 (49.73%), Query Frame = 1
Query: 256 AQDPDSAIKFLVPNFQAGSLIGKKGATIKDIQLKASCMVRIATSGMYYPGTMERAVLVAGETEGVKQACGLILHTLH-VPDNNESG--CAKLVSQEKAEAIEVTQ-RLLIPLTAGGLVIGRRGANIAALLAASGAKVTLGQKAD-VKVHERLVTVQGKLTSATKAVEMLVDKLVEEPVLSRFANLSVNYRGHGTSHSKAAMAAGIVPAPLPYQRAPRDPSTPQKAASDAGTEPDTVAAAXXXXXXXXXXXXXXXXXXXXXXTPVMIGSSPQQQQLGMFPMEPMTNPVAAAIASCQPTTTVTVGVPNNMIGAILGPGGAIISELQALSGARINVSQRDAFMPGTENRILTITGGPQATQTAQYLVSQKI 1344
A++ + +K L+P++ AGS+IGK G TI +Q + ++++ S +YPGT ER L+ G E + I + +P + + + L Q V Q +L++P + GL+IG+ GA + A++ SGA V L QK + + + ER+VT+ G+ KAVE++V K+ E+P S N+S + + + A P PY AA+ A + D +A +G +P + + NP AAA + V + VP N++GAILG GG + E Q L+GARI +S++ F+PGT NR +TITG P ATQ AQYL+SQ+I
Sbjct: 28 AKEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNGVHNFIAEKVREMPQSAQKPEPVSILQPQTTVNPDRVKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTISGEPEQNRKAVEIIVQKIQEDPQSSSCLNISYS--------NVSGPVANSNPTGSPYANTAEVLPNAAAAAATAFSGNDLLAITSALNTLASYGYNTNTLG---------LGLNPAAASGVLAAVAASANPAAAAALADGAKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSPAATQAAQYLISQRI 378
BLAST of mRNA_Ecto-sp6_S_contig9.18182.1 vs. uniprot
Match: A0A3Q0SIN8_AMPCI (NOVA alternative splicing regulator 1 n=2 Tax=Cichlidae TaxID=8113 RepID=A0A3Q0SIN8_AMPCI) HSP 1 Score: 166 bits (419), Expect = 3.010e-43 Identity = 115/362 (31.77%), Postives = 180/362 (49.72%), Query Frame = 1
Query: 277 IKFLVPNFQAGSLIGKKGATIKDIQLKASCMVRIATSGMYYPGTMERAVLVAGETEGVKQACGLILHTLH-VPDNNESG--CAKLVSQEKAEAIEVTQ-RLLIPLTAGGLVIGRRGANIAALLAASGAKVTLGQKAD-VKVHERLVTVQGKLTSATKAVEMLVDKLVEEPVLSRFANLSVNYRGHGTSHSKAAMAAGIVPAPLPYQRAPRDPSTPQKAASDAGTEPDTVAAAXXXXXXXXXXXXXXXXXXXXXXTPVMIGSSPQQQQLGMFPMEPMTNPVAAAIASCQPTTTVT-VGVPNNMIGAILGPGGAIISELQALSGARINVSQRDAFMPGTENRILTITGGPQATQTAQYLVSQKI 1344
+K L+P++ AGS+IGK G TI +Q + ++++ S +YPGT ER L+ G E + I + +P + + + L Q V Q +L++P + GL+IG+ GA + A++ SGA V L QK + + + ER+VT+ G+ KAVE++V K+ E+P S N+S + + + A P PY +T + + G P +++ + +G +P + + NP AAA V + VP N++GAILG GG + E Q L+GARI +S++ F+PGT NR +TITG P ATQ AQYL+SQ+I
Sbjct: 15 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNGVHNFIAEKVREMPQSAQKPEPVSILQPQTTVNPDRVKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTISGEPEQNRKAVEIIVQKIQEDPQSSSCLNISYS--------NVSGPVANSNPTGSPYA------NTGEAGLTGMGAFPAAMSSLSGNDLLAITSALNTLASYGYNTNTLGLGLNPAAASGVLAAVAASANPAAAAAKLADGAKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSPAATQAAQYLISQRI 362
BLAST of mRNA_Ecto-sp6_S_contig9.18182.1 vs. uniprot
Match: A0A8C8C3R2_ONCTS (NOVA alternative splicing regulator 2 n=1 Tax=Oncorhynchus tshawytscha TaxID=74940 RepID=A0A8C8C3R2_ONCTS) HSP 1 Score: 162 bits (411), Expect = 6.640e-42 Identity = 114/366 (31.15%), Postives = 181/366 (49.45%), Query Frame = 1
Query: 277 IKFLVPNFQAGSLIGKKGATIKDIQLKASCMVRIATSGMYYPGTMERAVLVAGETEGVKQACGLILHTLH-VPDNNESG--CAKLVSQEKAEAIEVTQ-RLLIPLTAGGLVIGRRGANIAALLAASGAKVTLGQKAD-VKVHERLVTVQGKLTSATKAVEMLVDKLVEEPVLSRFANLSVNYRGHGTSHSKAAMAAGIVPAPLPYQRAPRDPSTPQKAASDAGTEPDTVAAAXXXXXXXXXXXXXXXXXXXXXXTPVMIGSSPQQQQLGMFPMEPMTNPVAAAIASCQPT-----TTVTVGVPNNMIGAILGPGGAIISELQALSGARINVSQRDAFMPGTENRILTITGGPQATQTAQYLVSQKI 1344
+K L+P++ AGS+IGK G TI +Q + ++++ S +YPGT ER L+ G E + I + +P + + + L Q V Q +L++P + GL+IG+ GA + A++ SGA V L QK + + + ER+VT+ G+ KAVE++V K+ E+P S N+S + + + A P PY ++ + + G P T+++ + +G +P + + NP A A+ V + VP N++GAILG GG + E Q L+GARI +S++ F+PGT NR +TITG P ATQ AQYL+SQ+I
Sbjct: 31 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNSVHSFIAEKVREMPQSAQKTEPVSILQPQTTVNPDRVKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTISGEPEQNCKAVEIIVQKIQEDPQSSSCLNISYS--------NISGPVANSNPTGSPYA------NSAEAGLAGMGGFPGTMSSFSGNDLLAITSALNTLASYGYNTNTLGLGLNPAAASGVLAAVAASANPAXXAAANLLKLGDGAKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSPAATQAAQYLISQRI 382
BLAST of mRNA_Ecto-sp6_S_contig9.18182.1 vs. uniprot
Match: A0A835ZEM4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEM4_9STRA) HSP 1 Score: 167 bits (424), Expect = 1.230e-41 Identity = 161/455 (35.38%), Postives = 228/455 (50.11%), Query Frame = 1
Query: 265 PDSAIKFLVPNFQAGSLIGKKGATIKDIQLKASCMVRIATSGMYYPGTMERAVLVAGETEGVKQACGLILHTLH--VPDNNESGCAKLVSQEKAEAIEVTQRLLIPLTAGGLVIGRRGANIAALLAASGAKVTLGQKADVKVHERLVTVQGKLTSATKAVEMLVDKLVEEPVLSRFANLSVN----------------------------------YRGHGTS--HSKAAMAAGIVPAPLPYQRAP--RDPSTPQKA----ASDAGTEPDTVAAAXXXXXXXXXXXXXXXXXXXXXX---------------------------------TP-----------VMIGSSPQQQQLGMFPMEPMTNPVAAAIASCQPTTTVTVGVPNNMIGAILGPGGAIISELQALSGARINVSQRDAFMPGTENRILTITGGPQATQTAQYLVSQKI-EAFVQR 1362
P AIK LV N AG LIGK GATI+ +Q + +V +++S PG ++R VL++G+ VK A L+LHT+H D + + A L E+TQRLLIP AGGLVIG RG+ + AL +ASGA+V+L K + ER++T+ G L + ++ML+D L EP +SR+ NLSV+ + G G H+ + +A+ APL ++P PQ A P + +AXXXXXXXXXXXXXXXXXXXXXX TP +M+G + PM + +P +A+A TT+ V +P+ +IG ILG GG ++ELQ ++GARI+VS+R +PGT +R++TITG A AQY++ ++ EA QR
Sbjct: 264 PACAIKLLVSNNMAGGLIGKAGATIQSLQAQTGALVNVSSSACL-PGILDRVVLISGDAAPVKMAVALVLHTVHDHARDRDATEPAPLAIAAALNEQEITQRLLIPAAAGGLVIGWRGSGVQALSSASGARVSLSHKRNPASAERVMTIHGALGACRLCIDMLLDVLRREPAMSRYLNLSVDPPQLQQGDAPAAGAPSXXXXXXXXXSQELADVATWVGGGVEGEHTISPVASA---APLTMHQSPTLHHHVPPQHVLELPVQQAAAHPQHLMSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVTPAAPVGYYPGGGMMVGMPVLAPVVPQMPMPMVQHPDVSAVA-----TTIMVSIPDALIGVILGRGGVTVNELQMITGARISVSRRGNALPGTTDRVVTITGSAAAAHAAQYMMMHRVQEACAQR 709
BLAST of mRNA_Ecto-sp6_S_contig9.18182.1 vs. uniprot
Match: A0A8J6KYE5_MICOH (RNA-binding protein Nova-2 n=1 Tax=Microtus ochrogaster TaxID=79684 RepID=A0A8J6KYE5_MICOH) HSP 1 Score: 159 bits (401), Expect = 3.440e-40 Identity = 119/386 (30.83%), Postives = 180/386 (46.63%), Query Frame = 1
Query: 277 IKFLVPNFQAGSLIGKKGATIKDIQLKASCMVRIATSGMYYPGTMERAVLVAGETEGVKQACGLILHTLH-VPDNNESGCAKLVSQEKAEAIEVTQ-------------RLLIPLTAGGLVIGRRGANIAALLAASGAKVTLGQKAD-VKVHERLVTVQGKLTSATKAVEMLVDKLVEEPVLSRFANLS-VNYRG----HGTSHSKAAMAAGIVPAPLPYQRAPRDPSTPQKAASDAGTEPDTVAAAXXXXXXXXXXXXXXXXXXXXXXTPVMIGSSPQQQQLGMFPMEPMTNPVAAAIASCQPTTTVTVGVPNNMIGAILGPGGAIISELQALSGARINVSQRDAFMPGTENRILTITGGPQATQTAQYLVSQKIEAFVQRPRGW 1374
+K L+P++ AGS+IGK G TI +Q + ++++ S +YPGT ER LV G E + I + +P + K E + + Q +L++P + GL+IG+ GA + A++ SGA V L QK + + + ER+VTV G+ KAV +V K+ E+P S N+S N G + S A A ++PA + G P + A T G + LG+ + +AA +A+ V + VP N++GAILG GG + E Q L+GARI +S++ F+PGT NR +TITG P ATQ AQYL+SQ++ + Q W
Sbjct: 38 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQ----------AMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGSPYASPADVLPAAAAXXXXXXXGLLGPAGLAGVGAFPAALPA---------FSGTDLLAISTALNTLASYGYNTNSLSLGLNSAA-ASGVLAAKLAAESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQYLISQRV-TYEQGTSAW 402
BLAST of mRNA_Ecto-sp6_S_contig9.18182.1 vs. uniprot
Match: A0A1S3GH48_DIPOR (RNA-binding protein Nova-1-like n=3 Tax=Boreoeutheria TaxID=1437010 RepID=A0A1S3GH48_DIPOR) HSP 1 Score: 154 bits (390), Expect = 2.210e-39 Identity = 115/384 (29.95%), Postives = 173/384 (45.05%), Query Frame = 1
Query: 238 TRQESLAQDPDSAIKFLVPNFQAGSLIGKKGATIKDIQLKASCMVRIATSGMYYPGTMERAVLVAGETEGVKQACGLILHTLH-VPDNNESGCAKLVSQEKAEAIEVTQ-------------RLLIPLTAGGLVIGRRGANIAALLAASGAKVTLGQKAD-VKVHERLVTVQGKLTSATKAVEMLVDKLVEEPVLSRFANLSVNYRGHGTSHSKAAMAAGIVPAPLPYQRAPRDPSTPQKAASDAGTEPDTVAAAXXXXXXXXXXXXXXXXXXXXXXTPVMIGSSPQQQQLGMFPMEPMTNPVAAAIASCQPTTTVTVGVPNNMIGAILGPGGAIISELQALSGARINVSQRDAFMPGTENRILTITGGPQATQTAQYLVSQKI 1344
T++ + ++ + +K L+P++ AGS+IGK G TI +Q + ++++ S +YPGT ER LV G E + I + +P + K E + + Q +L++P + GL+IG+ GA + A++ SGA V L QK + + + ER+VTV G+ KAV +V K+ E+P S N+S + A A P PY AS A P AAA A +A+ V + VP N++GAILG GG + E Q L+GARI +S++ F+PGT NR +TITG P ATQ AQYL+SQ++
Sbjct: 22 TKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQ----------AMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLNISYA--------NVAGPVANSNPTGSPY-------------ASPADVLPAAAAAAGGFL-------------------------------------------TAEKLAAESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQYLISQRV 331
BLAST of mRNA_Ecto-sp6_S_contig9.18182.1 vs. uniprot
Match: D2I064_AILME (Uncharacterized protein (Fragment) n=4 Tax=Eutheria TaxID=9347 RepID=D2I064_AILME) HSP 1 Score: 153 bits (386), Expect = 8.300e-39 Identity = 114/384 (29.69%), Postives = 172/384 (44.79%), Query Frame = 1
Query: 238 TRQESLAQDPDSAIKFLVPNFQAGSLIGKKGATIKDIQLKASCMVRIATSGMYYPGTMERAVLVAGETEGVKQACGLILHTLH-VPDNNESGCAKLVSQEKAEAIEVTQ-------------RLLIPLTAGGLVIGRRGANIAALLAASGAKVTLGQKAD-VKVHERLVTVQGKLTSATKAVEMLVDKLVEEPVLSRFANLSVNYRGHGTSHSKAAMAAGIVPAPLPYQRAPRDPSTPQKAASDAGTEPDTVAAAXXXXXXXXXXXXXXXXXXXXXXTPVMIGSSPQQQQLGMFPMEPMTNPVAAAIASCQPTTTVTVGVPNNMIGAILGPGGAIISELQALSGARINVSQRDAFMPGTENRILTITGGPQATQTAQYLVSQKI 1344
T++ + ++ + +K L+P++ AGS+IGK G TI +Q + ++++ S +YPGT ER LV G E + I + +P + K E + + Q +L++P + GL+IG+ GA + A++ SGA V L QK + + + ER+VTV G+ KAV +V K+ E+P S N+S + A A P PY AS A P AA A +A+ V + VP N++GAILG GG + E Q L+GARI +S++ F+PGT NR +TITG P ATQ AQYL+SQ++
Sbjct: 22 TKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQ----------AMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLNISYA--------NVAGPVANSNPTGSPY-------------ASPADVLPAAAGAAGGFL-------------------------------------------TAEKLAAESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQYLISQRV 331 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18182.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig9.18182.1 >prot_Ecto-sp6_S_contig9.18182.1 ID=prot_Ecto-sp6_S_contig9.18182.1|Name=mRNA_Ecto-sp6_S_contig9.18182.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=459bp MPTQIAQMEMDQPVELIHQQEDDEQRSNSEVMDVEEVQQQHEQQHQSATTback to top mRNA from alignment at Ecto-sp6_S_contig9:1666540..1672967+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig9.18182.1 ID=mRNA_Ecto-sp6_S_contig9.18182.1|Name=mRNA_Ecto-sp6_S_contig9.18182.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=6428bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:1666540..1672967+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig9:1666540..1672967+ >mRNA_Ecto-sp6_S_contig9.18182.1 ID=mRNA_Ecto-sp6_S_contig9.18182.1|Name=mRNA_Ecto-sp6_S_contig9.18182.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1377bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:1666540..1672967+ (Ectocarpus species6 EcLAC_371)back to top |