mRNA_Ecto-sp6_S_contig9.18155.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig9.18155.1
Unique NamemRNA_Ecto-sp6_S_contig9.18155.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
BLAST of mRNA_Ecto-sp6_S_contig9.18155.1 vs. uniprot
Match: D7G0N5_ECTSI (SpoU_sub_bind domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0N5_ECTSI)

HSP 1 Score: 808 bits (2086), Expect = 6.050e-289
Identity = 528/552 (95.65%), Postives = 531/552 (96.20%), Query Frame = 1
Query:  295 MAWEDDDRVRRRGRQVDRGFSSGGVVDXXXXXXDSTXSYGGEGGSGGRLGGGWADADGXXXXXXXXQQNFSDGRXXXXXXXYRXXXXXXXXXXXXXXXXXXXXXGWDQAADSSSRGDXXXXXXXXXXRDFGGRESGGRSSSSWDDNRSXXXXXXXXXXXXXXXXSSYGGREXXXXXXXXXXSSFRGRQNDASGRDSADDRPSRAWTPSSGGGGATYQAELSPTHNADEDTNFDMVYGIAPVLNVLRNNRREKLGLYCQDGLAPANKKDRAAANRIYDIARETDVPMTTTDKGYLNTLCGNRPHQGFILKARPLKFEPILFLPRVEDVEADPSVEATATEADAETSPEHDXXXXXXXXXXXXXXXXXXXXXPLAAAATGQVWLALDEVTDPQNFGALLRSAHFFGASGVVACAKNSAALTATVSKSSAGAVEVMRVHSTANMMRFLKRSRENGWRVVGTSVSERSGPLHELPAGPGAPPTIVVLGNEGYGVRTNVLRECEFLVEVAGDGGGALAEGATPSTVDSLNVSVTGGVVLFHLLAGAKHAAAYAASSD 1950
            MAWEDDDRVRRRGRQVDRGFSSGGVVD  XXXXDST SYGGEGGSGGRLGGGWAD+DGXXXX    QQN SDGRXXXXXX YRXXXXXXXXXXXXXXXXXXXXXGWDQAADSSSRGDXXX XXXXXX DFGGRESGGRSSSSWDDNRSXXXXXXXXXXXXXX  SS+    XXXXXXXXXX  FRGRQNDA GRD ADDRPSRAWTPSSGGGGATYQAELSPTHNADEDTNFDMVYGIAPVLNVLRNNRREKLGLYCQDGLAPANKKDRAAANRIYDIARETDVPMTTTDKGYLNTLCGNRPHQGFILKARPLKFEPILFLPRVEDVEADPSVEATATEADAETSPEHDXXXXXXXXXXXXXXXXXXXXXPLAAAATGQVWLALDEVTDPQNFGALLRSAHFFGASGVVACAKNSAALTATVSKSSAGAVEVMRVHSTANMMRFLKRSRENGWRVVGTSVSERSGPLHELPAGPGAPPTIVVLGNEGYGVRTNVLRECEFLVEVAGDGGGALAEGATPSTVDSLNVSVTGGVVLFHLLAGAKHAAAYAASS+
Sbjct:    1 MAWEDDDRVRRRGRQVDRGFSSGGVVDKSXXXXDSTDSYGGEGGSGGRLGGGWADSDGXXXXRSSRQQNSSDGRXXXXXXNYRXXXXXXXXXXXXXXXXXXXXXGWDQAADSSSRGDXXXGXXXXXXXDFGGRESGGRSSSSWDDNRSXXXXXXXXXXXXXX--SSHXXXXXXXXXXXXXXXXFRGRQNDAGGRDRADDRPSRAWTPSSGGGGATYQAELSPTHNADEDTNFDMVYGIAPVLNVLRNNRREKLGLYCQDGLAPANKKDRAAANRIYDIARETDVPMTTTDKGYLNTLCGNRPHQGFILKARPLKFEPILFLPRVEDVEADPSVEATATEADAETSPEHDXXXXXXXXXXXXXXXXXXXXXPLAAAATGQVWLALDEVTDPQNFGALLRSAHFFGASGVVACAKNSAALTATVSKSSAGAVEVMRVHSTANMMRFLKRSRENGWRVVGTSVSERSGPLHELPAGPGAPPTIVVLGNEGYGVRTNVLRECEFLVEVAGDGGGALAEGATPSTVDSLNVSVTGGVVLFHLLAGAKHAAAYAASSE 550          
BLAST of mRNA_Ecto-sp6_S_contig9.18155.1 vs. uniprot
Match: A0A6H5JJ28_9PHAE (SpoU_sub_bind domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ28_9PHAE)

HSP 1 Score: 745 bits (1924), Expect = 5.150e-263
Identity = 487/645 (75.50%), Postives = 502/645 (77.83%), Query Frame = 1
Query:   43 MTITRRSEGRDRVLSPKIAAVAAVGVVVATSLALLVQPGQAFHSNMLASGALRRASTAAVRRAPAAAAALPRRLATNRSGPGLSMAWEDDDRVRRRGRQVDRGFSSGGVVDXXXXXXDSTXSYGGEGGSGGRLGGGWADADGXXXXXXXXQQ--NFSDGRXXXXXXXYRXXXXXXXXXXXXXXXXXXXXX----GWDQAADSSSRGDXXXXXXXXXXRDFGG---RESGGRSSSSWDDNRSXXXXXXXXXXXXXXXXSSYGGREXXXXXXXXXXSSFRGRQNDASGRDSADDRPSRAWTPSSGGGGATYQAELSPTHNADEDTNFDMVYGIAPVLNVLRNNRREKLGLYCQDGLAPANKKDRAAANRIYDIARETDVPMTTTDKGYLNTLCGNRPHQGFILKARPLKFEPILFLPRVEDVEADPSVEATATEADAETSPEHDXXXXXXXXXXXXXXXXXXXXXPLAAAATGQVWLALDEVTDPQNFGALLRSAHFFGASGVVACAKNSAALTATVSKSSAGAVEVMRVHSTANMMRFLKRSRENGWRVVGTSVSERSGPLHELPAGPGAPPTIVVLGNEGYGVRTNVLRECEFLVEVAGDGGGALAEGATPSTVDSLNVSVTGGVVLFHLLAGAKHAAAYAASSD 1950
            MTITRRSEGRDRVLSPKIAA AAVGV VATSLALLVQPGQAFH+NMLASGALRRAS +AVRRAPAAAAALPRRLATNR GPG SMAWEDDDRVRRRGRQVDRGFSSGGVVD      DST SYGG           WAD   XXXXXXXX      S   XXXXX  YR                         G  +A  + +   XXXXXXXXXXRD  G   R +GG+++++                      +   GR              R R     G        +           A YQAELSPTHN DEDTNFDMVYGIAPVLNVLRNNRREKLGLYCQDGLAPANKKDRAAANRIYDIARETDVPMTTTDKGYLNTLCGNRPHQGFILKARPLKFEPILFLPRV+DVEADPSVEATAT ADAETSPEHDXXXXXXXXXXXXXXXXXXXXXPLAAAATGQVWLALDEVTDPQNFGALLRSAHFFGASGVVACAKNSAALTATVSKSSAGAVEVMRVHSTANMMRFLKRSRENGWRVVGTSVSERSGPLHELPAGPGAPPTIVVLGNEGYGVRTNVLREC+FLVEVAGDGGGALAEGATPSTVDSLNVSVTGGVVLFHLLAGAKHAAAYAASSD
Sbjct:    1 MTITRRSEGRDRVLSPKIAAAAAVGVAVATSLALLVQPGQAFHTNMLASGALRRASASAVRRAPAAAAALPRRLATNRCGPGFSMAWEDDDRVRRRGRQVDRGFSSGGVVDKSLNDGDSTDSYGGXXXXXXXXXXXWADXXXXXXXXXXXXXXXKLSXXXXXXXXDNYRNGGGSRGEGAVQGVGVAATIGISVGGRAEAVVTPAGTTXXXXXXXXXXRDAVGAAPRTAGGKAAAALTMGERGHSGGGETMQVVAIARTI--GRLERGLLPLEAVEVMRWRGGGLGGVGGVAHSDTTK---------ANYQAELSPTHNVDEDTNFDMVYGIAPVLNVLRNNRREKLGLYCQDGLAPANKKDRAAANRIYDIARETDVPMTTTDKGYLNTLCGNRPHQGFILKARPLKFEPILFLPRVKDVEADPSVEATATAADAETSPEHDXXXXXXXXXXXXXXXXXXXXXPLAAAATGQVWLALDEVTDPQNFGALLRSAHFFGASGVVACAKNSAALTATVSKSSAGAVEVMRVHSTANMMRFLKRSRENGWRVVGTSVSERSGPLHELPAGPGAPPTIVVLGNEGYGVRTNVLRECDFLVEVAGDGGGALAEGATPSTVDSLNVSVTGGVVLFHLLAGAKHAAAYAASSD 634          
BLAST of mRNA_Ecto-sp6_S_contig9.18155.1 vs. uniprot
Match: A0A835YSW2_9STRA (Alpha/beta knot methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSW2_9STRA)

HSP 1 Score: 273 bits (698), Expect = 4.620e-80
Identity = 164/327 (50.15%), Postives = 202/327 (61.77%), Query Frame = 1
Query:  973 DEDTNFDMVYGIAPVLNVLRNNRREKL-GLYCQDGLAPANKKDRAAANRIYDIARETDVPMTTTDKGYLNTLCGNRPHQGFILKARPLKFEPILFLPRVEDVEADPSVEATATEADAETSPEHDXXXXXXXXXXXXXXXXXXXXXPLAAAATGQVWLALDEVTDPQNFGALLRSAHFFGASGVVACAKNSAALTATVSKSSAGAVEVMRVHSTANMMRFLKRSRENGWRVVGTSVSERSGPLHELPAGPGAPPTIVVLGNEGYGVRTNVLRE------------CEFLVEVAGDGGGALAEGATPSTVDSLNVSVTGGVVLFHLLAG 1914
            +++   D VYGI+PVLN L   RR  L GL+ Q+G+ P ++KDRAA  +I  +A E  +P+T  DKGYLN+LCGNRPHQGF+L+ RPL+FEP+  LP                      +P  D                     P        +WLALDEVTDPQN GALLRSAHFFGA GVVACAKNSA+LT TVSK+S+GA+EVM VHST NMM+FL++SR NGWRVVGT++   + P+  L     A PTIVVLGNEG+G+RT+VLRE            CE LVEV G    A       STV+SLNVSVTGG++L+ L  G
Sbjct:  237 EDEGEVDNVYGISPVLNALTAKRRAGLLGLFVQEGITPRDRKDRAALVKIQQLAEEVALPVTFIDKGYLNSLCGNRPHQGFVLRCRPLEFEPLPHLP----------------------APPKD---------------------PERGVGAAPLWLALDEVTDPQNLGALLRSAHFFGADGVVACAKNSASLTPTVSKASSGALEVMTVHSTNNMMKFLRQSRANGWRVVGTALGREAKPVQSLHT---AVPTIVVLGNEGHGLRTSVLREHRCTLIVLPCVQCEVLVEVQGAPRAA-------STVESLNVSVTGGLLLYALRQG 510          
BLAST of mRNA_Ecto-sp6_S_contig9.18155.1 vs. uniprot
Match: A0A7S2WAK4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WAK4_9STRA)

HSP 1 Score: 217 bits (552), Expect = 2.180e-61
Identity = 150/346 (43.35%), Postives = 185/346 (53.47%), Query Frame = 1
Query:  892 RPSRAWTPSSGGGGATYQAELSPTHN--ADEDTNFDMVYGIAPVLNVLRNNRREKLG-----LYCQDGLAPANKKDRAAANRIYDIARETDVPMTTTDKGYLNTLCGNRPHQGFILKARPLKFEPILFLPRVEDVEADPSVEATATEADAETSPEHDXXXXXXXXXXXXXXXXXXXXXPLAAAATGQVWLALDEVTDPQNFGALLRSAHFFGASGVVACAKNSAALTATVSKSSAGAVEVMRVHSTANMMRFLKRSRENGWRVVGTSVSERSGPLHELPAGPGAPPTIVVLGNEGYGVRTNVLRECEFLVEVAGDGGGALAEGATPSTVDSLNVSVTGGVVLFHLL 1908
            RP R    S GGG   +             ED   D++YG+ PVLN LR+ RRE  G         +G+   ++K+     RI D+A E +VP+  T+K  LN L  NRPHQG +L A PL+ E    L  +E   AD  +E     A                                      Q WLALDEV DPQN GALLRSA F GA+GVV CAKNSA LT  VSK+SAGA+EVM VHST NM +FL +S+ NGWRVVGTS+   S  L ++       PTI+VLGNEG+G+RTNV+  CE  V +AG      A    P  VDSLNVSV+GG++L H L
Sbjct:   26 RPGRGGATSDGGGRPRFDRRAPKRRKQLVTED-GMDLLYGVNPVLNALRSGRRESFGDLRVQASLMEGVLKRSRKNPQLV-RIVDVAEEREVPVVWTEKHDLNMLANNRPHQGVVLAASPLEPES---LDGLEPATADEGLEGEGGSA--------------------------------------QCWLALDEVVDPQNLGALLRSACFLGATGVVYCAKNSAGLTPAVSKASAGALEVMDVHSTKNMPKFLDKSKANGWRVVGTSLEPSSVSLSQVDP---QEPTILVLGNEGHGLRTNVMSCCEVFVRIAGQR--EPASDGDPD-VDSLNVSVSGGILLNHFL 322          
BLAST of mRNA_Ecto-sp6_S_contig9.18155.1 vs. uniprot
Match: A0A7S0IVT9_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IVT9_9EUKA)

HSP 1 Score: 211 bits (536), Expect = 1.910e-58
Identity = 146/320 (45.62%), Postives = 181/320 (56.56%), Query Frame = 1
Query:  970 ADEDTNFDMVYGIAPVLNVLRNNRREKLGLYCQDGLAPANKKDRAAANRIYDIARETDVPMTTTDKGYLNTLCGNRPHQGFILKARPLKFEPILFLPRVED--VEADPSVEATATEADAETSPEHDXXXXXXXXXXXXXXXXXXXXXPLAAAATGQVWLALDEVTDPQNFGALLRSAHFFGASGVVACAKNSAALTATVSKSSAGAVEVMRVHSTANMMRFLKRSRENGWRVVGTSVSERSGPLHELPAGPGAPPTIVVLGNEGYGVRTNVLRECEFLVEV--AGDGGGALAEGATP--STVDSLNVSVTGGVVLFHLLA 1911
            ++ DT F  +YG++PV   LR   R    L  Q+ L    +KD  A   +  +A  + +P+   DKG LN LCGNRPHQG +L+A+PL F  I   P + D  + AD     TA  A   T P                           A A   VWLALDEVTDPQN GALLR+A F G  GVV   KNSA L+  VSK+SAGA+E+M+VHST N++ FL+ +R  GW VVG SV +   P  EL A   A PT++VLG+EG G+RTNVLR C  LV V  A  G  +LA G T   S VDSLNVSV G V+L+ LLA
Sbjct:   87 SEYDTEF--LYGVSPVQAALRQRWRTCERLLVQENLQLGKRKDAGAIQEVQRLAEASQLPIHRVDKGTLNGLCGNRPHQGLVLQAQPLAFSRISAPPPLSDAFLLADA---VTALPASPATDPPASQGDGAGEAW---------------APARRNVWLALDEVTDPQNMGALLRTAFFLGVDGVVVSEKNSAPLSPVVSKASAGAMELMKVHSTRNLVSFLEEARAGGWTVVGASVDKSVLPS-ELDA---ARPTVLVLGSEGRGLRTNVLRACGQLVRVPRAQSGAASLAAGGTDHSSLVDSLNVSVAGAVLLYALLA 382          
BLAST of mRNA_Ecto-sp6_S_contig9.18155.1 vs. uniprot
Match: A0A7S1U7I1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U7I1_9STRA)

HSP 1 Score: 201 bits (511), Expect = 6.340e-56
Identity = 138/337 (40.95%), Postives = 175/337 (51.93%), Query Frame = 1
Query:  922 GGGGATYQAELSPTHNADE-----DTNFDMVYGIAPVLNVLRNNRREKLGLYCQDGLAPAN---KKDRAAANRIYDIARETDVPMTTTDKGYLNTLCGNRPHQGFILKARPLKFEPILFLPRVEDVEADPSVEATATEADAETSPEHDXXXXXXXXXXXXXXXXXXXXXPLAAAATGQVWLALDEVTDPQNFGALLRSAHFFGASGVVACAKNSAALTATVSKSSAGAVEVMRVHSTANMMRFLKRSRENGWRVVGTSVSERSGPLHELPAGPGAPPTIVVLGNEGYGVRTNVLRECEFLVEVAGDGGGALAEGATPSTVDSLNVSVTGGVVLFHLL 1908
            GGGG     E +P+ +  +         + +YGI+PV   L   RR+   L  Q+G A AN   KKD  A  R  ++ARE  + +   DKG LN LC NRPHQG +L    L  EP+  LP+                                                  AAA   VWLALDEVTDPQN GA+LRSA+F GA+GVV   KNSA L+  VSK+SAGA+E+M VH+  NM   L  +  NGWRVV   V+  S PL E+PAG  + PT++V+G+EG G+RT V R C     ++G G GA  E +    VDSLNVSVT G+ L H L
Sbjct:    7 GGGGNRGGWERTPSTDPAKAMPVMPVGVEALYGISPVRTALEQARRKFEYLIVQEG-ALANTSAKKDEPAFARAVELAREAGLEIKEMDKGVLNNLCANRPHQGLVLACEELDAEPLKELPK--------------------------------------------------AAAPTDVWLALDEVTDPQNLGAMLRSAYFLGAAGVVVSKKNSARLSPVVSKASAGALEIMPVHAVGNMPVMLHNAATNGWRVVAADVTPDSQPLAEVPAG--SAPTVIVMGSEGRGLRTMVKRACTHTAVISGAGFGA--EKSKSDLVDSLNVSVTAGIFLSHFL 288          
BLAST of mRNA_Ecto-sp6_S_contig9.18155.1 vs. uniprot
Match: A0A7S0PUZ7_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0PUZ7_9EUKA)

HSP 1 Score: 202 bits (514), Expect = 1.680e-55
Identity = 138/316 (43.67%), Postives = 175/316 (55.38%), Query Frame = 1
Query:  976 EDTNFDMVYGIAPVLNVLRNNRREKLGLYCQDGLAPANKKDRAAANRIYDIARETDVPMTTTDKGYLNTLCGNRPHQGFILKARPLKFEPILFLPRVEDVEADPSVEATATEADAETSPEHDXXXXXXXXXXXXXXXXXXXXXPLAAAATGQVWLALDEVTDPQNFGALLRSAHFFGASGVVACAKNSAALTATVSKSSAGAVEVMRVHSTANMMRFLKRSRENGWRVVGTSVSERSGPLHELPAGPGAP-PTIVVLGNEGYGVRTNVLRECEFLVEV--AGDGGGALAEGATP--STVDSLNVSVTGGVVLFHLL 1908
            +D N D +YG++PV   LR   R    L  Q+ L  + +KD  A   +  +A E  +P+   DKG LN LCGNRPHQG +L+A+PL F  I   P        PS +A      AE +PE                           A    VWLALDEVTDPQN GALLR+A F G  GVV   KNSA L+  VSK+S+GA+E+M+VHST N++ FL  +R  GW VVG ++         LPA   +  PT++VLG+EG G+RTNVLR CE LV +  A  G   +A G T   S VDSLNVSV G V+L+ LL
Sbjct:   90 QDDNSDFLYGVSPVQAALRQRWRPCERLLLQENLQLSKRKDAGAILEVQRLAEEHQLPIQRVDKGTLNGLCGNRPHQGVVLQAQPLSFNRISKPPA-------PSSDAGGV---AEDAPE---------------------------AGRRNVWLALDEVTDPQNLGALLRTALFLGVDGVVVSEKNSAPLSPAVSKASSGAMELMQVHSTKNLVSFLDDARAGGWLVVGAALDNSV-----LPAQLDSQRPTVLVLGSEGRGLRTNVLRACEQLVRIPRAPSGTATVAAGGTDHSSLVDSLNVSVAGAVLLYALL 363          
BLAST of mRNA_Ecto-sp6_S_contig9.18155.1 vs. uniprot
Match: A9T6G4_PHYPA (SpoU_sub_bind domain-containing protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9T6G4_PHYPA)

HSP 1 Score: 197 bits (500), Expect = 1.670e-54
Identity = 128/310 (41.29%), Postives = 161/310 (51.94%), Query Frame = 1
Query:  991 DMVYGIAPVLNVLRNNRREKLGLYCQ----DGLAPANKKDRAAANRIYDIARETDVPMTTTDKGYLNTLCGNRPHQGFILKARPLKFEPILFLPRVEDVEADPSVEATATEADAETSPEHDXXXXXXXXXXXXXXXXXXXXXPLAAAATGQVWLALDEVTDPQNFGALLRSAHFFGASGVVACAKNSAALTATVSKSSAGAVEVMRVHSTANMMRFLKRSRENGWRVVGTSVSERSGPLHELPAGPGAPPTIVVLGNEGYGVRTNVLRECEFLVEVAGDGGGALAEGATPSTVDSLNVSVTGGVVLFHLL 1908
            + VYG+AP+       RR    LY Q    D +A   +KD+ A N I + A   ++ + T  K +LN L  NRPHQG +L A PL+  P  +L R       PS++                                             VW+ALDEV DPQNFGA+LRS H+ GA+GVV CAKNSA L+  VSK+SAGA+EVM + S  NMM+FL  S +NGWR VG S   R+ P+ EL  G    PTI+VLGNEG G+RTNV R C  LV +  D             VDSLNVSV  G++L  LL
Sbjct:   19 EAVYGVAPIRAAFLAERRIFHTLYVQTNLVDNIATGKRKDKQAVNWILNRAHNLEMKVETVSKQHLNLLVDNRPHQGLVLDASPLELVPCEYLER-------PSIQD----------------------------------------GRSPVWVALDEVIDPQNFGAILRSCHYLGATGVVVCAKNSAPLSGVVSKASAGALEVMEIQSCRNMMKFLDTSVQNGWRAVGASSEPRALPIQELEPGL---PTILVLGNEGRGLRTNVKRSCTELVSIKAD------------AVDSLNVSVAAGILLHDLL 266          
BLAST of mRNA_Ecto-sp6_S_contig9.18155.1 vs. uniprot
Match: A0A7S2CGL2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CGL2_9STRA)

HSP 1 Score: 200 bits (509), Expect = 2.350e-54
Identity = 130/314 (41.40%), Postives = 173/314 (55.10%), Query Frame = 1
Query:  976 EDTNFDMVYGIAPVLNVLRNNRREK-LGLYCQDGLAPANKKDRAAANRIYDIARE-TDVPMTTTDKGYLNTLCGNRPHQGFILKARPLKFEPILFLPRVEDVEADPSVEATATEADAETSPEHDXXXXXXXXXXXXXXXXXXXXXPLAAAATGQVWLALDEVTDPQNFGALLRSAHFFGASGVVACAKNSAALTATVSKSSAGAVEVMRVHSTANMMRFLKRSRENGWRVVGTSVSERSGPLHELPAGPGAPPTIVVLGNEGYGVRTNVLRECEFLVEVA-GDGGGALAEGATPSTVDSLNVSVTGGVVLFHLL 1908
            E + FD +YGI PVLN L   +R + + L  Q G     +++  A  RI  +A E + + M+  DK  LN L GNRPHQG +L A PL  + +  LP  ++                                                  T   WLALDEV DPQN GAL+RSA F GA GV+   KNSA L+ +VSK+SAGA+E++ +H+T N+ R L+ +R++GWRVVGT++S+ S PL EL  G    PTIVVLGNEG+G+RTNV R C+  V +A G       E A    +DSLNVSV+GG++L HLL
Sbjct:  133 EPSPFDHIYGIQPVLNALLMKQRPRFVELMLQQGSFQNPQREEGALGRIASLAGEISGLQMSLVDKHDLNMLSGNRPHQGVVLLAEPLPLQTLDTLPSPDE-------------------------------------------------GTTPCWLALDEVVDPQNLGALIRSACFLGAEGVITSVKNSAPLSPSVSKASAGAMELVNIHATKNLPRLLENARQDGWRVVGTALSDDSIPLEELKPGR---PTIVVLGNEGHGLRTNVRRACDVTVRIARGTRSMKQKEAAELGDLDSLNVSVSGGILLHHLL 394          
BLAST of mRNA_Ecto-sp6_S_contig9.18155.1 vs. uniprot
Match: A0A388JU39_CHABU (SpoU_sub_bind domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388JU39_CHABU)

HSP 1 Score: 205 bits (522), Expect = 8.270e-53
Identity = 127/306 (41.50%), Postives = 168/306 (54.90%), Query Frame = 1
Query:  991 DMVYGIAPVLNVLRNNRREKLGLYCQDGLAPANKKDRAAANRIYDIARETDVPMTTTDKGYLNTLCGNRPHQGFILKARPLKFEPILFLPRVEDVEADPSVEATATEADAETSPEHDXXXXXXXXXXXXXXXXXXXXXPLAAAATGQVWLALDEVTDPQNFGALLRSAHFFGASGVVACAKNSAALTATVSKSSAGAVEVMRVHSTANMMRFLKRSRENGWRVVGTSVSERSGPLHELPAGPGAPPTIVVLGNEGYGVRTNVLRECEFLVEVAGDGGGALAEGATPSTVDSLNVSVTGGVVLFHLL 1908
            +++YG++PV+  L   RRE  GLY Q+GL    KKDR   + +   A E  +   T  K  LN LC NRPHQG +L A PL+F  +  +P  E+            + D +  P+                                 W+ALDEV DPQNFGA+LRSA+F GA+GVV CA+NSA L+A VSK+S+GA+E M+V+S  NM +FL + R NGWRV+G S S  +    +L  G    PTI V+GNEG G+R NV REC  +V + G     L  G  P  +DSLNVSV  G++L  LL
Sbjct:  559 EIIYGVSPVVAALGALRREIYGLYVQEGLESKRKKDRRGVDMVMKKADELRLTAETVSKHELNLLCDNRPHQGLVLDASPLQFVDVKEIPPPEE------------DKDWQHLPD--------------------------GRVVAPCWVALDEVMDPQNFGAVLRSAYFLGATGVVTCARNSAPLSAVVSKASSGAMEAMQVYSCKNMFKFLSQCRANGWRVLGASSSPTAVACRDLARGV---PTIFVVGNEGVGLRENVQRECTEMVRIPGSARTDL--GGRPFVIDSLNVSVAAGILLHELL 821          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18155.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0N5_ECTSI6.050e-28995.65SpoU_sub_bind domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JJ28_9PHAE5.150e-26375.50SpoU_sub_bind domain-containing protein n=1 Tax=Ec... [more]
A0A835YSW2_9STRA4.620e-8050.15Alpha/beta knot methyltransferase n=1 Tax=Tribonem... [more]
A0A7S2WAK4_9STRA2.180e-6143.35Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S0IVT9_9EUKA1.910e-5845.63Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
A0A7S1U7I1_9STRA6.340e-5640.95Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S0PUZ7_9EUKA1.680e-5543.67Hypothetical protein (Fragment) n=1 Tax=Coccolithu... [more]
A9T6G4_PHYPA1.670e-5441.29SpoU_sub_bind domain-containing protein n=1 Tax=Ph... [more]
A0A7S2CGL2_9STRA2.350e-5441.40Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A388JU39_CHABU8.270e-5341.50SpoU_sub_bind domain-containing protein n=1 Tax=Ch... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig9contigEcto-sp6_S_contig9:1455618..1458483 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score817.8
Seed ortholog evalue3.7e-234
Seed eggNOG ortholog2880.D7G0N5
Preferred nameMRM1
Model size1954
KEGG koko:K03218,ko:K15507
Hectar predicted targeting categorysignal anchor
GOsGO:0000154,GO:0000451,GO:0000453,GO:0000959,GO:0000963,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008171,GO:0008173,GO:0008649,GO:0008757,GO:0008989,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0031974,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0070013,GO:0070039,GO:0071704,GO:0071840,GO:0090304,GO:0140053,GO:0140098,GO:0140102,GO:1901360
Exons3
EggNOG free text desc.rRNA methyltransferase
EggNOG OGsCOG0566@1,KOG0838@2759
Ec32 ortholog descriptionAlpha/beta knot methyltransferases
Ec32 orthologEc-14_001660.1
EC2.1.1.185
Cds size1953
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03009
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350531.925021-CDS-Ecto-sp6_S_contig9:1455617..14565511682350531.925021-CDS-Ecto-sp6_S_contig9:1455617..1456551Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 1455618..1456551 +
1682350531.9377127-CDS-Ecto-sp6_S_contig9:1457102..14573161682350531.9377127-CDS-Ecto-sp6_S_contig9:1457102..1457316Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 1457103..1457316 +
1682350531.9476035-CDS-Ecto-sp6_S_contig9:1457678..14584831682350531.9476035-CDS-Ecto-sp6_S_contig9:1457678..1458483Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 1457679..1458483 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig9.18155.1prot_Ecto-sp6_S_contig9.18155.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig9 1455618..1458483 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig9.18155.1

>prot_Ecto-sp6_S_contig9.18155.1 ID=prot_Ecto-sp6_S_contig9.18155.1|Name=mRNA_Ecto-sp6_S_contig9.18155.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=651bp
RQHTSHHSLSAAVAMTITRRSEGRDRVLSPKIAAVAAVGVVVATSLALLV
QPGQAFHSNMLASGALRRASTAAVRRAPAAAAALPRRLATNRSGPGLSMA
WEDDDRVRRRGRQVDRGFSSGGVVDKSFNNGDSTDSYGGEGGSGGRLGGG
WADADGGGGGGSSRQQNFSDGRGRGGGGNYRSGGGSRGGNGRYEQRGRGR
GRGWDQAADSSSRGDGARGGRGGYDRDFGGRESGGRSSSSWDDNRSRGRG
RGGQGRGRGRGRSSYGGREGGGRSYGGRESSFRGRQNDASGRDSADDRPS
RAWTPSSGGGGATYQAELSPTHNADEDTNFDMVYGIAPVLNVLRNNRREK
LGLYCQDGLAPANKKDRAAANRIYDIARETDVPMTTTDKGYLNTLCGNRP
HQGFILKARPLKFEPILFLPRVEDVEADPSVEATATEADAETSPEHDDDD
DGQEEDRSAAAAPKKPPAPLAAAATGQVWLALDEVTDPQNFGALLRSAHF
FGASGVVACAKNSAALTATVSKSSAGAVEVMRVHSTANMMRFLKRSRENG
WRVVGTSVSERSGPLHELPAGPGAPPTIVVLGNEGYGVRTNVLRECEFLV
EVAGDGGGALAEGATPSTVDSLNVSVTGGVVLFHLLAGAKHAAAYAASSD
*
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mRNA from alignment at Ecto-sp6_S_contig9:1455618..1458483+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig9.18155.1 ID=mRNA_Ecto-sp6_S_contig9.18155.1|Name=mRNA_Ecto-sp6_S_contig9.18155.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=2866bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:1455618..1458483+ (Ectocarpus species6 EcLAC_371)
AGACAGCACACGAGTCACCATTCCCTGTCAGCAGCAGTGGCGATGACCAT CACCCGCCGGAGCGAGGGGAGAGACAGGGTTCTCTCGCCGAAGATCGCGG CAGTTGCAGCAGTGGGGGTGGTGGTGGCGACATCGTTGGCACTTCTAGTC CAGCCTGGCCAGGCCTTCCACTCAAACATGTTGGCCAGCGGTGCTCTGCG CCGTGCATCCACTGCAGCCGTCCGCCGAGCACCAGCAGCAGCTGCAGCGC TGCCACGACGCCTCGCAACCAATCGCTCCGGCCCTGGGCTCTCCATGGCC TGGGAAGATGATGATCGTGTGCGACGGCGAGGCAGGCAGGTTGACCGCGG GTTTAGCAGCGGCGGCGTGGTTGACAAGAGCTTCAACAACGGCGACAGCA CCGACAGCTATGGCGGTGAGGGCGGTAGCGGCGGTAGATTGGGGGGAGGG TGGGCAGATGCTGACGGCGGTGGCGGCGGCGGCAGCAGTCGACAACAAAA TTTTTCGGACGGGCGAGGAAGAGGAGGAGGTGGCAACTACAGAAGTGGGG GAGGTAGCCGCGGAGGCAACGGGCGATACGAGCAACGAGGCCGCGGGCGG GGACGAGGTTGGGACCAGGCAGCCGACAGCAGTAGCAGAGGGGATGGTGC AAGGGGTGGGCGTGGCGGCTACGATCGGGATTTCGGTGGGCGGGAGAGCG GGGGGCGTAGTAGCTCCAGCTGGGACGACAACAGAAGCAGAGGCCGGGGG CGGGGGGGGCAGGGACGCGGTCGCGGTCGCGGCCGCTCTTCGTACGGCGG GAGGGAAGGCGGCGGCCGCTCTTACGGTGGGAGAGAGAGCTCATTCCGGG GGCGGCAAAACGATGCAAGTGGTAGGGATAGCGCGGACGACAGGCCGTCT CGAGCGTGGACTCCTTCCTCTGGAGGCGGCGGAGGTGATGAGATGGCGTG GGGGGGGGGGGGGAGGGGTGGGCGGGGGGGCGCACAGCGATACGACGATG AAGGATACGAGCTTGAAAACGAGCAAGGAGAAGCGGGCGAGGGCGATGAG GGCGGAGAGGGGTGGGGTCCGTCGCGGTCTGCTCCTGCATCGGACTGGAT GAGGGGAGAGCTATGTGAGAGGGGACCCGTTTTGGTTGTAGCGGGGGGGG GGCGTGTGTTGTGTCTCTGTGATACCGTAGTGCTTGAAGTTCCGGCAATC GCGTGCTGTTGTGTATTCGACCTATTTAGTGCTTTACGAATGAAAGCACA TAGGAAAGCAGCAGAGTCCCCGTGTGCACAAGAAGATCGCCGCAAGCGGC CAGTTGCGTTCCAGCGTGGCGAAATCTTCTTGACCATATTGAGCAGCTGT GTTCGAGTACTCGAACCAGGTTTGTACACCGTGACGGTGCAGCACACGCG TGGTTCATTTATGGCACTCGTCTGATTTTTGTGTCGCTGAATCTGCTTCA CGTTCGCTGCCACCCCCAACAAAATCGTCCATCAGCCACCTACCAAGCGG AGCTTTCCCCCACCCACAACGCGGATGAGGACACGAACTTCGACATGGTG TATGGCATCGCCCCTGTGCTCAACGTGCTGAGGAACAATCGGCGCGAGAA GCTCGGACTGTACTGCCAGGATGGATTGGCGCCGGCGAACAAGAAGGACC GCGCCGCGGCGAACCGGATCTACGACATCGCCAGAGAGACCGACGTTCCG TGAGTCAGCGAGACGCACACATTTTAGCGAACTGCACATATCGTCAGTTA GTTGTGTAGGGTGCGGCTAGAGCAGAGCCTGCTTTGACGGCGTGCGCATA TTGTACTGAAGCGCAAGAAGGGGGGTGACAGATCTGCCAAAAACATGATT ATGCCGCCCTCAACGCGCATGTTTGCACCACTTCCCCGACAGGCTACAGT ACAGAGGTTTTGGACGTGGACTGTTATGAAGCGAAAACACAACACTTGTA AATCTGCTGCTATAGTCCAGTGCTGCTCAGGTCTGTCCTCCTCACAGCAT TGTTTCATGTCGGTTTTCACGTGGAATCTCTTTGCTCTTCTACTCCGACC GGCGTCCGCAGGATGACCACGACCGACAAGGGCTACCTCAACACGCTCTG CGGGAACCGCCCCCACCAGGGCTTCATCCTCAAGGCGCGCCCTCTCAAGT TCGAGCCCATCCTCTTCCTGCCGCGCGTCGAAGACGTCGAAGCCGACCCC TCGGTCGAAGCAACAGCAACAGAGGCAGACGCCGAGACATCGCCAGAACA CGACGACGATGACGACGGACAAGAAGAGGACCGTAGTGCTGCTGCCGCAC CCAAGAAGCCCCCGGCGCCCCTGGCAGCGGCCGCCACCGGGCAGGTCTGG CTGGCGCTGGACGAGGTCACGGACCCCCAGAACTTCGGCGCGCTCCTCCG CTCCGCCCACTTCTTCGGGGCCTCGGGGGTCGTCGCGTGCGCCAAGAACT CGGCCGCCCTCACGGCAACCGTGAGCAAGTCCAGCGCGGGCGCCGTGGAG GTCATGCGCGTCCACTCGACCGCCAACATGATGCGGTTCCTGAAGCGGAG CCGGGAGAACGGGTGGAGGGTCGTGGGCACCTCGGTCAGCGAGAGGTCGG GGCCGCTCCACGAGCTCCCAGCGGGCCCGGGGGCCCCGCCGACTATCGTA GTGCTCGGGAACGAGGGGTACGGCGTGCGCACCAACGTCCTGAGGGAGTG CGAGTTCTTGGTGGAGGTCGCGGGGGACGGCGGGGGCGCGCTGGCCGAGG GGGCGACGCCTTCGACGGTTGACTCGCTCAACGTTAGCGTCACCGGGGGG GTCGTTCTGTTCCATTTGCTCGCCGGCGCGAAACACGCCGCGGCATACGC AGCTTCTTCGGACTGA
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig9:1455618..1458483+

>mRNA_Ecto-sp6_S_contig9.18155.1 ID=mRNA_Ecto-sp6_S_contig9.18155.1|Name=mRNA_Ecto-sp6_S_contig9.18155.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1953bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:1455618..1458483+ (Ectocarpus species6 EcLAC_371)
AGACAGCACACGAGTCACCATTCCCTGTCAGCAGCAGTGGCGATGACCAT
CACCCGCCGGAGCGAGGGGAGAGACAGGGTTCTCTCGCCGAAGATCGCGG
CAGTTGCAGCAGTGGGGGTGGTGGTGGCGACATCGTTGGCACTTCTAGTC
CAGCCTGGCCAGGCCTTCCACTCAAACATGTTGGCCAGCGGTGCTCTGCG
CCGTGCATCCACTGCAGCCGTCCGCCGAGCACCAGCAGCAGCTGCAGCGC
TGCCACGACGCCTCGCAACCAATCGCTCCGGCCCTGGGCTCTCCATGGCC
TGGGAAGATGATGATCGTGTGCGACGGCGAGGCAGGCAGGTTGACCGCGG
GTTTAGCAGCGGCGGCGTGGTTGACAAGAGCTTCAACAACGGCGACAGCA
CCGACAGCTATGGCGGTGAGGGCGGTAGCGGCGGTAGATTGGGGGGAGGG
TGGGCAGATGCTGACGGCGGTGGCGGCGGCGGCAGCAGTCGACAACAAAA
TTTTTCGGACGGGCGAGGAAGAGGAGGAGGTGGCAACTACAGAAGTGGGG
GAGGTAGCCGCGGAGGCAACGGGCGATACGAGCAACGAGGCCGCGGGCGG
GGACGAGGTTGGGACCAGGCAGCCGACAGCAGTAGCAGAGGGGATGGTGC
AAGGGGTGGGCGTGGCGGCTACGATCGGGATTTCGGTGGGCGGGAGAGCG
GGGGGCGTAGTAGCTCCAGCTGGGACGACAACAGAAGCAGAGGCCGGGGG
CGGGGGGGGCAGGGACGCGGTCGCGGTCGCGGCCGCTCTTCGTACGGCGG
GAGGGAAGGCGGCGGCCGCTCTTACGGTGGGAGAGAGAGCTCATTCCGGG
GGCGGCAAAACGATGCAAGTGGTAGGGATAGCGCGGACGACAGGCCGTCT
CGAGCGTGGACTCCTTCCTCTGGAGGCGGCGGAGCCACCTACCAAGCGGA
GCTTTCCCCCACCCACAACGCGGATGAGGACACGAACTTCGACATGGTGT
ATGGCATCGCCCCTGTGCTCAACGTGCTGAGGAACAATCGGCGCGAGAAG
CTCGGACTGTACTGCCAGGATGGATTGGCGCCGGCGAACAAGAAGGACCG
CGCCGCGGCGAACCGGATCTACGACATCGCCAGAGAGACCGACGTTCCGA
TGACCACGACCGACAAGGGCTACCTCAACACGCTCTGCGGGAACCGCCCC
CACCAGGGCTTCATCCTCAAGGCGCGCCCTCTCAAGTTCGAGCCCATCCT
CTTCCTGCCGCGCGTCGAAGACGTCGAAGCCGACCCCTCGGTCGAAGCAA
CAGCAACAGAGGCAGACGCCGAGACATCGCCAGAACACGACGACGATGAC
GACGGACAAGAAGAGGACCGTAGTGCTGCTGCCGCACCCAAGAAGCCCCC
GGCGCCCCTGGCAGCGGCCGCCACCGGGCAGGTCTGGCTGGCGCTGGACG
AGGTCACGGACCCCCAGAACTTCGGCGCGCTCCTCCGCTCCGCCCACTTC
TTCGGGGCCTCGGGGGTCGTCGCGTGCGCCAAGAACTCGGCCGCCCTCAC
GGCAACCGTGAGCAAGTCCAGCGCGGGCGCCGTGGAGGTCATGCGCGTCC
ACTCGACCGCCAACATGATGCGGTTCCTGAAGCGGAGCCGGGAGAACGGG
TGGAGGGTCGTGGGCACCTCGGTCAGCGAGAGGTCGGGGCCGCTCCACGA
GCTCCCAGCGGGCCCGGGGGCCCCGCCGACTATCGTAGTGCTCGGGAACG
AGGGGTACGGCGTGCGCACCAACGTCCTGAGGGAGTGCGAGTTCTTGGTG
GAGGTCGCGGGGGACGGCGGGGGCGCGCTGGCCGAGGGGGCGACGCCTTC
GACGGTTGACTCGCTCAACGTTAGCGTCACCGGGGGGGTCGTTCTGTTCC
ATTTGCTCGCCGGCGCGAAACACGCCGCGGCATACGCAGCTTCTTCGGAC
TGA
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