mRNA_Ecto-sp6_S_contig9.18140.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig9.18140.1
Unique NamemRNA_Ecto-sp6_S_contig9.18140.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
[Close]
BLAST of mRNA_Ecto-sp6_S_contig9.18140.1 vs. uniprot
Match: D8LLV8_ECTSI (PI3K/PI4K catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLV8_ECTSI)

HSP 1 Score: 413 bits (1062), Expect = 1.400e-134
Identity = 205/207 (99.03%), Postives = 207/207 (100.00%), Query Frame = 1 
Query:    1 VIFKERWHQKEARLRRASKLGQAREWRLMPVIVKAGDDLRQEQLASQFFALANRILKQSPLRARAGLRPYDIVATSHDAGIIEAIPDTVSIDALKKNDPLYTTLLDFFHRHFGPPESEGFQRARRFFVESLAANCIVTYLLQVKDRHNGNILLDARGRVIHIDFGFMLANSPGGNFNFESAPFKLTAEFVDLMGGPSSTCFKGFREV 621
            VIFKERWHQKEARLRRASKLGQAREWRLMPVIVKAGDDLRQEQLASQFFALA+RILKQSPLRARAGLRPYDIVATSHDAGIIEAIPDTVSIDALKKNDPLYTTLLDFFHRHFGPPESEGFQRARRFFVESLAANCIVTYLLQVKDRHNGNILLDARGRVIHIDFGFMLANSPGGNFNFESAPFKLTAEFVDLMGGPSSTCFKGFRE+
Sbjct:  910 VIFKERWHQKEARLRRASKLGQAREWRLMPVIVKAGDDLRQEQLASQFFALAHRILKQSPLRARAGLRPYDIVATSHDAGIIEAIPDTVSIDALKKNDPLYTTLLDFFHRHFGPPESEGFQRARRFFVESLAANCIVTYLLQVKDRHNGNILLDARGRVIHIDFGFMLANSPGGNFNFESAPFKLTAEFVDLMGGPSSTCFKGFREL 1116
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BLAST of mRNA_Ecto-sp6_S_contig9.18140.1 vs. uniprot
Match: A0A6H5JBM1_9PHAE (PI3K/PI4K catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBM1_9PHAE)

HSP 1 Score: 411 bits (1056), Expect = 9.190e-133
Identity = 204/207 (98.55%), Postives = 206/207 (99.52%), Query Frame = 1 
Query:    1 VIFKERWHQKEARLRRASKLGQAREWRLMPVIVKAGDDLRQEQLASQFFALANRILKQSPLRARAGLRPYDIVATSHDAGIIEAIPDTVSIDALKKNDPLYTTLLDFFHRHFGPPESEGFQRARRFFVESLAANCIVTYLLQVKDRHNGNILLDARGRVIHIDFGFMLANSPGGNFNFESAPFKLTAEFVDLMGGPSSTCFKGFREV 621
            VIFKERWHQKEARLRRASKLGQAREWRLMPVIVKAGDDLRQEQLASQFFALA+RILKQSPLRARAGLRPYDIVATSHDAGIIEAIPDTVSIDALKKNDPLYTTLLDFFHRHFGPP+SEGFQRARRFFVESLAANCIVTYLLQVKDRHNGNILLDARGRVIHIDFGFMLANSPGGNFNFESAPFKLTAEFVDLMGGPSS CFKGFREV
Sbjct:  939 VIFKERWHQKEARLRRASKLGQAREWRLMPVIVKAGDDLRQEQLASQFFALAHRILKQSPLRARAGLRPYDIVATSHDAGIIEAIPDTVSIDALKKNDPLYTTLLDFFHRHFGPPKSEGFQRARRFFVESLAANCIVTYLLQVKDRHNGNILLDARGRVIHIDFGFMLANSPGGNFNFESAPFKLTAEFVDLMGGPSSACFKGFREV 1145
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BLAST of mRNA_Ecto-sp6_S_contig9.18140.1 vs. uniprot
Match: T0QYL2_SAPDV (PI3K/PI4K catalytic domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QYL2_SAPDV)

HSP 1 Score: 261 bits (666), Expect = 1.630e-78
Identity = 127/207 (61.35%), Postives = 159/207 (76.81%), Query Frame = 1 
Query:    1 VIFKERWHQKEARLRRASKLGQAREWRLMPVIVKAGDDLRQEQLASQFFALANRILKQSPLRARAGLRPYDIVATSHDAGIIEAIPDTVSIDALKKNDPLYTTLLDFFHRHFGPPESEGFQRARRFFVESLAANCIVTYLLQVKDRHNGNILLDARGRVIHIDFGFMLANSPGGNFNFESAPFKLTAEFVDLMGGPSSTCFKGFREV 621
            ++F+ERW +KE RLR +S  G    WRL+PVIVK+ DDLRQEQ A+Q     +++   + +     LRPYD++ATS  +G IEA+PDTVS+D+LKKNDP YTTLLDF+ R+FGPP+S  F+RARR FVESLAA  +V Y+ Q+KDRHNGNIL+DA G VIHIDFGF+  NSPG NFNFE APFKLT EFV+LMGGP S+ F+ FR +
Sbjct:  582 IVFRERWSEKEDRLRASSPYGHLPGWRLIPVIVKSNDDLRQEQFAAQLIQQCHKVFVDANIPLT--LRPYDVIATSATSGFIEAVPDTVSLDSLKKNDPDYTTLLDFYVRYFGPPDSSRFKRARRNFVESLAAYSMVCYVFQIKDRHNGNILVDADGHVIHIDFGFLFTNSPGNNFNFERAPFKLTDEFVELMGGPRSSTFRYFRSL 786
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BLAST of mRNA_Ecto-sp6_S_contig9.18140.1 vs. uniprot
Match: A0A1V9ZTI6_9STRA (Phosphatidylinositol kinase (PIK-J) n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZTI6_9STRA)

HSP 1 Score: 259 bits (662), Expect = 5.330e-78
Identity = 127/207 (61.35%), Postives = 158/207 (76.33%), Query Frame = 1 
Query:    1 VIFKERWHQKEARLRRASKLGQAREWRLMPVIVKAGDDLRQEQLASQFFALANRILKQSPLRARAGLRPYDIVATSHDAGIIEAIPDTVSIDALKKNDPLYTTLLDFFHRHFGPPESEGFQRARRFFVESLAANCIVTYLLQVKDRHNGNILLDARGRVIHIDFGFMLANSPGGNFNFESAPFKLTAEFVDLMGGPSSTCFKGFREV 621
            ++F+ERW +KE RLR  S+ G    WRL+PVIVK+ DDLRQEQ A+Q     +++   + +     LRPYD++ATS  +G IEA+PDTVS+D+LKKNDP YTTLLDF+ R+FGP +S  F+RARR FVESLAA  IV Y+ Q+KDRHNGNIL+DA G VIHIDFGF+  NSPG NFNFE APFKLT EFV+LMGGP S+ F+ FR +
Sbjct:  572 IVFRERWSEKEDRLRPTSEFGHLPGWRLIPVIVKSNDDLRQEQFAAQLIQQCHKVFVDANIPLT--LRPYDVIATSATSGFIEAVPDTVSLDSLKKNDPDYTTLLDFYVRYFGPQDSSRFKRARRNFVESLAAYSIVCYVFQIKDRHNGNILVDADGHVIHIDFGFLFTNSPGNNFNFERAPFKLTDEFVELMGGPRSSTFRYFRSL 776
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BLAST of mRNA_Ecto-sp6_S_contig9.18140.1 vs. uniprot
Match: A0A2D4BTD9_PYTIN (Phosphatidylinositol 3 and 4-kinase-like protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BTD9_PYTIN)

HSP 1 Score: 262 bits (669), Expect = 1.020e-77
Identity = 128/207 (61.84%), Postives = 158/207 (76.33%), Query Frame = 1 
Query:    1 VIFKERWHQKEARLRRASKLGQAREWRLMPVIVKAGDDLRQEQLASQFFALANRILKQSPLRARAGLRPYDIVATSHDAGIIEAIPDTVSIDALKKNDPLYTTLLDFFHRHFGPPESEGFQRARRFFVESLAANCIVTYLLQVKDRHNGNILLDARGRVIHIDFGFMLANSPGGNFNFESAPFKLTAEFVDLMGGPSSTCFKGFREV 621
            ++F+ERW  KE R+R+ S  G    WRL+PVIVK+ DDLRQEQ A+Q  A  +RI +   L  R  LRPY+++ATS  AG+IEA+PDTVS+D+LK+NDP YTTLLDFFHR FGP +S  F++ARR FVESLAA  I+ Y+ Q+KDRHNGNIL+D  G +IHIDFGF+L NSPG N NFE APFKLT EFV+LMGGP S  F+ FR +
Sbjct:  860 IVFRERWSDKEDRIRKTSPFGDHPGWRLLPVIVKSNDDLRQEQFAAQLIAQCDRIFRAYSLPLR--LRPYNVIATSPTAGLIEAVPDTVSLDSLKRNDPEYTTLLDFFHRLFGPSDSFTFRQARRNFVESLAAYSILCYVFQIKDRHNGNILVDTEGHIIHIDFGFLLTNSPGSNLNFERAPFKLTDEFVELMGGPRSATFRYFRSL 1064
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BLAST of mRNA_Ecto-sp6_S_contig9.18140.1 vs. uniprot
Match: A0A1V9Z3H6_9STRA (Phosphatidylinositol kinase (PIK-J) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z3H6_9STRA)

HSP 1 Score: 258 bits (660), Expect = 1.390e-77
Identity = 127/207 (61.35%), Postives = 158/207 (76.33%), Query Frame = 1 
Query:    1 VIFKERWHQKEARLRRASKLGQAREWRLMPVIVKAGDDLRQEQLASQFFALANRILKQSPLRARAGLRPYDIVATSHDAGIIEAIPDTVSIDALKKNDPLYTTLLDFFHRHFGPPESEGFQRARRFFVESLAANCIVTYLLQVKDRHNGNILLDARGRVIHIDFGFMLANSPGGNFNFESAPFKLTAEFVDLMGGPSSTCFKGFREV 621
            ++F+ERW +KE RLR  S+ G    WRL+PVIVK+ DDLRQEQ A+Q     ++I   + +     LRPYD++ATS  +G IEA+PDTVS+D+LKKNDP YTTLLDF+ R+FGP +S  F+RARR FVESLAA  +V Y+ Q+KDRHNGNIL+DA G VIHIDFGF+  NSPG NFNFE APFKLT EFV+LMGGP S+ F+ FR +
Sbjct:  593 IVFRERWSEKEDRLRALSEYGNLPGWRLIPVIVKSNDDLRQEQFAAQLIHQCHKIFVDANIPLT--LRPYDVIATSATSGFIEAVPDTVSLDSLKKNDPDYTTLLDFYVRYFGPEDSSRFKRARRNFVESLAAYSMVCYIFQIKDRHNGNILIDADGHVIHIDFGFLFTNSPGNNFNFERAPFKLTDEFVELMGGPRSSTFRYFRSL 797
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BLAST of mRNA_Ecto-sp6_S_contig9.18140.1 vs. uniprot
Match: A0A662WM37_9STRA (PI3K/PI4K catalytic domain-containing protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WM37_9STRA)

HSP 1 Score: 252 bits (644), Expect = 1.970e-77
Identity = 125/207 (60.39%), Postives = 157/207 (75.85%), Query Frame = 1 
Query:    1 VIFKERWHQKEARLRRASKLGQAREWRLMPVIVKAGDDLRQEQLASQFFALANRILKQSPLRARAGLRPYDIVATSHDAGIIEAIPDTVSIDALKKNDPLYTTLLDFFHRHFGPPESEGFQRARRFFVESLAANCIVTYLLQVKDRHNGNILLDARGRVIHIDFGFMLANSPGGNFNFESAPFKLTAEFVDLMGGPSSTCFKGFREV 621
            ++F+ERW +KEAR+R  S  G    WRL+ VIVK+ DDLRQEQ A+Q  A  +RI ++  L     LRPY+++ATS   G+IEA+PDTVS+D+LK+NDP YT+LLDF++R  G  ES GF RA+R FVESLAA  +V Y+ Q+KDRHNGNILLD +G VIHIDFGF+L NSPG N+NFE APFKLT EFV LMGGP S+ F+ FR +
Sbjct:  314 IVFRERWSEKEARIRCESPFGDHPGWRLLSVIVKSNDDLRQEQFAAQLIAQCDRIFREYSLPL--SLRPYNVIATSAKTGLIEAVPDTVSLDSLKRNDPDYTSLLDFYYRLHGDKESTGFARAQRNFVESLAAYSMVCYVFQIKDRHNGNILLDTQGHVIHIDFGFLLTNSPGSNWNFERAPFKLTDEFVQLMGGPRSSTFRYFRSL 518
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BLAST of mRNA_Ecto-sp6_S_contig9.18140.1 vs. uniprot
Match: A0A3R7JFU2_9STRA (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JFU2_9STRA)

HSP 1 Score: 257 bits (656), Expect = 1.170e-76
Identity = 127/207 (61.35%), Postives = 157/207 (75.85%), Query Frame = 1 
Query:    1 VIFKERWHQKEARLRRASKLGQAREWRLMPVIVKAGDDLRQEQLASQFFALANRILKQSPLRARAGLRPYDIVATSHDAGIIEAIPDTVSIDALKKNDPLYTTLLDFFHRHFGPPESEGFQRARRFFVESLAANCIVTYLLQVKDRHNGNILLDARGRVIHIDFGFMLANSPGGNFNFESAPFKLTAEFVDLMGGPSSTCFKGFREV 621
            ++F+ERW +KEAR+RR S  G    WRL+ VIVK+ DDLRQEQ A+Q  A  +RI ++  L     LRPY+++ATS   G+IEA+PDTVS+D+LK+NDP YTTLLDF+HR  G   + GF RA+R FVESLAA  IV Y+ Q+KDRHNGNILLD  G VIHIDFGF+L NSPG N+NFE APFKLT EFV+LMGGP S+ F+ FR +
Sbjct:  660 IVFRERWSEKEARIRRESPFGDHPGWRLLSVIVKSNDDLRQEQFAAQLIAQCDRIFREYSLPL--ALRPYNVIATSAKTGLIEAVPDTVSLDSLKRNDPGYTTLLDFYHRLHGDKNTTGFTRAQRNFVESLAAYSIVCYVFQIKDRHNGNILLDTDGHVIHIDFGFLLTNSPGSNWNFERAPFKLTDEFVELMGGPRSSTFRYFRSL 864
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BLAST of mRNA_Ecto-sp6_S_contig9.18140.1 vs. uniprot
Match: A0A3F2RT18_9STRA (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RT18_9STRA)

HSP 1 Score: 257 bits (656), Expect = 1.210e-76
Identity = 127/207 (61.35%), Postives = 157/207 (75.85%), Query Frame = 1 
Query:    1 VIFKERWHQKEARLRRASKLGQAREWRLMPVIVKAGDDLRQEQLASQFFALANRILKQSPLRARAGLRPYDIVATSHDAGIIEAIPDTVSIDALKKNDPLYTTLLDFFHRHFGPPESEGFQRARRFFVESLAANCIVTYLLQVKDRHNGNILLDARGRVIHIDFGFMLANSPGGNFNFESAPFKLTAEFVDLMGGPSSTCFKGFREV 621
            ++F+ERW +KEAR+RR S  G    WRL+ VIVK+ DDLRQEQ A+Q  A  +RI ++  L     LRPY+++ATS   G+IEA+PDTVS+D+LK+NDP YTTLLDF+HR  G   + GF RA+R FVESLAA  IV Y+ Q+KDRHNGNILLD  G VIHIDFGF+L NSPG N+NFE APFKLT EFV+LMGGP S+ F+ FR +
Sbjct:  663 IVFRERWSEKEARIRRESPFGDHPGWRLLSVIVKSNDDLRQEQFAAQLIAQCDRIFREYSLPL--ALRPYNVIATSAKTGLIEAVPDTVSLDSLKRNDPGYTTLLDFYHRLHGDKNTTGFTRAQRNFVESLAAYSIVCYVFQIKDRHNGNILLDTDGHVIHIDFGFLLTNSPGSNWNFERAPFKLTDEFVELMGGPRSSTFRYFRSL 867
[Close]
BLAST of mRNA_Ecto-sp6_S_contig9.18140.1 vs. uniprot
Match: W7TUE8_9STRA (Phosphatidylinositol 4-kinase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TUE8_9STRA)

HSP 1 Score: 252 bits (643), Expect = 1.310e-76
Identity = 133/210 (63.33%), Postives = 158/210 (75.24%), Query Frame = 1 
Query:    1 VIFKERWHQKEARLRRASKLGQAREWRLMPVIVKAGDDLRQEQLASQFFALANRILKQSPLRARAGLRPYDIVATSHDAGIIEAIPDTVSIDALKKNDPLYTTLLDFFHRHFGPPESEG---FQRARRFFVESLAANCIVTYLLQVKDRHNGNILLDARGRVIHIDFGFMLANSPGGNFNFESAPFKLTAEFVDLMGGPSSTCFKGFREV 621
            VIFKERW +KEARLR  S++G    WRL+PVIVKA DDLRQEQ ASQ       +L+Q+ +     +RPY I+ATS D G+IEAIPDTVS+DAL++NDP YTTL DFF R FG  + +G     RAR+ F+ESLAA  IV +LLQVKDRHNGNILLDA G VIHIDFGF+LA+SPG N  FE APFKLTAE VD++GGP S  F+ FRE+
Sbjct:  388 VIFKERWKEKEARLRGRSEIGHLPGWRLVPVIVKANDDLRQEQFASQLLGQIAHVLRQAEVPV--WVRPYGIIATSFDGGLIEAIPDTVSLDALRRNDPSYTTLPDFFQRFFGARQPDGELALARARQCFLESLAAYSIVCFLLQVKDRHNGNILLDAEGHVIHIDFGFLLASSPG-NVKFERAPFKLTAEMVDVLGGPRSAAFRRFREL 594
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18140.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLV8_ECTSI1.400e-13499.03PI3K/PI4K catalytic domain-containing protein n=1 ... [more]
A0A6H5JBM1_9PHAE9.190e-13398.55PI3K/PI4K catalytic domain-containing protein n=1 ... [more]
T0QYL2_SAPDV1.630e-7861.35PI3K/PI4K catalytic domain-containing protein n=2 ... [more]
A0A1V9ZTI6_9STRA5.330e-7861.35Phosphatidylinositol kinase (PIK-J) n=1 Tax=Achlya... [more]
A0A2D4BTD9_PYTIN1.020e-7761.84Phosphatidylinositol 3 and 4-kinase-like protein n... [more]
A0A1V9Z3H6_9STRA1.390e-7761.35Phosphatidylinositol kinase (PIK-J) n=1 Tax=Thraus... [more]
A0A662WM37_9STRA1.970e-7760.39PI3K/PI4K catalytic domain-containing protein (Fra... [more]
A0A3R7JFU2_9STRA1.170e-7661.35Uncharacterized protein n=1 Tax=Phytophthora kerno... [more]
A0A3F2RT18_9STRA1.210e-7661.35Uncharacterized protein n=1 Tax=Phytophthora kerno... [more]
W7TUE8_9STRA1.310e-7663.33Phosphatidylinositol 4-kinase n=1 Tax=Nannochlorop... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig9contigEcto-sp6_S_contig9:1321401..1324718 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score415.2
Seed ortholog evalue1.8e-113
Seed eggNOG ortholog2880.D8LLV8
Preferred namePI4KB
Model size632
KEGG rclassRC00002,RC00078
KEGG koko:K19801
KEGG ReactionR03361
KEGG Pathwayko00562,ko01100,ko04070,map00562,map01100,map04070
KEGG ModuleM00130
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000139,GO:0000212,GO:0000226,GO:0000280,GO:0000910,GO:0000916,GO:0003674,GO:0003824,GO:0004430,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005768,GO:0005794,GO:0005802,GO:0005829,GO:0005886,GO:0006629,GO:0006644,GO:0006650,GO:0006661,GO:0006793,GO:0006796,GO:0006810,GO:0006897,GO:0006898,GO:0006996,GO:0007010,GO:0007017,GO:0007030,GO:0007049,GO:0007051,GO:0007110,GO:0007111,GO:0007112,GO:0007140,GO:0007154,GO:0007165,GO:0007275,GO:0007276,GO:0007283,GO:0007423,GO:0007568,GO:0008150,GO:0008152,GO:0008340,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0010256,GO:0010259,GO:0012505,GO:0016020,GO:0016043,GO:0016192,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019637,GO:0019953,GO:0022402,GO:0022412,GO:0022414,GO:0022603,GO:0023052,GO:0030029,GO:0030036,GO:0030258,GO:0030725,GO:0030726,GO:0030865,GO:0030866,GO:0031032,GO:0031090,GO:0031410,GO:0031982,GO:0031984,GO:0032501,GO:0032502,GO:0032504,GO:0032506,GO:0033206,GO:0035295,GO:0035556,GO:0036213,GO:0042710,GO:0043062,GO:0043063,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043583,GO:0044010,GO:0044011,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044422,GO:0044424,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044764,GO:0044837,GO:0045017,GO:0046474,GO:0046486,GO:0046488,GO:0046834,GO:0046854,GO:0048015,GO:0048017,GO:0048137,GO:0048232,GO:0048285,GO:0048471,GO:0048513,GO:0048609,GO:0048731,GO:0048839,GO:0048856,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051179,GO:0051234,GO:0051239,GO:0051301,GO:0051321,GO:0051703,GO:0051704,GO:0051716,GO:0052742,GO:0060872,GO:0061640,GO:0061982,GO:0061983,GO:0065007,GO:0071704,GO:0071840,GO:0071889,GO:0071944,GO:0090175,GO:0090407,GO:0090605,GO:0090609,GO:0097708,GO:0098588,GO:0098657,GO:0098791,GO:0140013,GO:1901576,GO:1903046,GO:1905330,GO:2000026,GO:2000027
Exons6
EggNOG free text desc.phosphatidylinositol kinase activity
EggNOG OGsCOG5032@1,KOG0903@2759
EC2.7.1.67
Cds size630
COG Functional cat.BDLTU
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig9.18140.1prot_Ecto-sp6_S_contig9.18140.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig9 1321401..1324718 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350530.214044-CDS-Ecto-sp6_S_contig9:1321400..13214981682350530.214044-CDS-Ecto-sp6_S_contig9:1321400..1321498Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 1321401..1321498 -
1682350530.2275069-CDS-Ecto-sp6_S_contig9:1321861..13219671682350530.2275069-CDS-Ecto-sp6_S_contig9:1321861..1321967Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 1321862..1321967 -
1682350530.2377114-CDS-Ecto-sp6_S_contig9:1322907..13230451682350530.2377114-CDS-Ecto-sp6_S_contig9:1322907..1323045Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 1322908..1323045 -
1682350530.247508-CDS-Ecto-sp6_S_contig9:1323563..13236481682350530.247508-CDS-Ecto-sp6_S_contig9:1323563..1323648Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 1323564..1323648 -
1682350530.2643921-CDS-Ecto-sp6_S_contig9:1324191..13242971682350530.2643921-CDS-Ecto-sp6_S_contig9:1324191..1324297Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 1324192..1324297 -
1682350530.273153-CDS-Ecto-sp6_S_contig9:1324621..13247181682350530.273153-CDS-Ecto-sp6_S_contig9:1324621..1324718Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 1324622..1324718 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig9.18140.1

>prot_Ecto-sp6_S_contig9.18140.1 ID=prot_Ecto-sp6_S_contig9.18140.1|Name=mRNA_Ecto-sp6_S_contig9.18140.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=210bp
VIFKERWHQKEARLRRASKLGQAREWRLMPVIVKAGDDLRQEQLASQFFA
LANRILKQSPLRARAGLRPYDIVATSHDAGIIEAIPDTVSIDALKKNDPL
YTTLLDFFHRHFGPPESEGFQRARRFFVESLAANCIVTYLLQVKDRHNGN
ILLDARGRVIHIDFGFMLANSPGGNFNFESAPFKLTAEFVDLMGGPSSTC
FKGFREVSRL
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mRNA from alignment at Ecto-sp6_S_contig9:1321401..1324718-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig9.18140.1 ID=mRNA_Ecto-sp6_S_contig9.18140.1|Name=mRNA_Ecto-sp6_S_contig9.18140.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=3318bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:1321401..1324718- (Ectocarpus species6 EcLAC_371)
GTGATCTTCAAGGAACGGTGGCACCAGAAGGAGGCCCGGCTAAGGAGGGC
GTCAAAGCTGGGCCAAGCGCGAGAGTGGAGGCTGATGCCAGTCATCGGTG
AGAAAATAGAAGAGAAGGTCGAGGGAGGGCAGCCGAGTCGACTCAAGAGG
ACGAGGACGTGCAAACCGTTGTTGCGGGTTGGTATTTACCCATTTGTTTT
TTGTTTTTTTGGGCATGATGTGGTTATTGTGCTGGAGAGGTTGGCTGGGC
TGTTGCTGTGATGACGACGAAATGAGTGCACTTGCTTGTTGCTGATGCTG
TGGCTGCTGCTGCCGCTGCTGCTGCTGCTTCTGCTATCTCTGTTGTCTTA
TGTGCTTTCCGTTTTTTCCAATTTGGCTACAACCGTCGCTCCGCTGCTTG
CTTGCCGACATGCACGCGCAGTCAAGGCCGGGGATGATCTACGGCAGGAG
CAGCTGGCCTCGCAGTTCTTCGCTCTGGCTAACCGAATCCTCAAGCAGAG
CCCCCTCCGTGCAAGAGCTGGACTCAGGTATTTTCTTGCACTTCACGGAG
TACATGATGCGACAAAATTTGGTGGTGGTGGCAATGTATTGTGATCAGGT
ACACGCATGCAGTGAAATAGTTTCATACATACTCAGGAGTATCTGGTATG
ACACAATTTGTTTCTGGATGCAATCAACGGACGGTTTCGTTTTTTGTGGG
GGTAACGCGAGGCGCAGCTTGTGTTCTTGTCCCGTGAACTGTTCGCCCGA
TGTTTTGGAGTACTCGACAAGCGTCGAGCTGCTGCGAGTCTCTCACTGCG
GTATCCTCCACCGCCCCCCCTCCTCCTGCCGCTGTTGCCTCTGTTGCGGG
TAATGGATTCGTGAGGCTGGAGAGTCGAACCCGTCGTATTGTAGTAGATG
TCGTAGATGTCGTAGATGTCGTAGATCTCTGCTCGCTTTGAAACGTATAC
GCTCCGTCCCTTGCGGCGTAACATCTCCCCCCCCTTCGTGTCGCGTGCTG
CTCGCTGCCGTCCCCTGCGGCGTAAATCTCGTGGGTTCCGGGTCTCCCGA
ACCTTTGCCAACTTCTCCAGACCGTACGACATCGTGGCGACGTCGCACGA
TGCCGGGATCATCGAAGCTATCCCTGACACCGTCTCGATCGACGCTCTCA
AGAAGGTGTGCGTGGGGTGTCTTTGGTGATGGTTTGGCCTCTGGCGGGCG
CGCGCGGGGGGAGGGGGGGCAGGTAGGATGCGCAGGATGACGGAGCCACC
GGTTGATTTGTGATGCTATCTCGTGGTAGATGTCGGGGTGTGGGATTGCG
GTGTCATTGGGCGATATCGGTTAAGGCTCAAATGGAACCGGTTGAGGCGT
TTTGTCACTTGTTTTATTCACGTGTATTAATTGTTACGGCAAGTGGCGAC
AAATACTCGGTAGTAGTTTCCACCCACGCACCATAGTATTATCATCTCGG
CCGCGTGGTGGACACGTGATTCTGTGACGCCGCTCTTCCCCCATTGGTCC
GTGCTGCAGTACAAGTGAACAACAACGGGGGGAAGTGGACGCCCCCCACC
TCGTCCACTCGCTGGGTGAACCGGTGCATAACACAAACCAGATTCCTACT
CCTTCCAACTCAGCCCCCTTGTTTTGCCTTGCGCTGCTCTCTCTCTCTCT
CTGGTGTGTGTGGCGTCACGCAGAACGACCCGCTCTACACGACCCTGCTG
GACTTCTTCCACCGTCACTTCGGACCCCCCGAGTCGGAAGGTTTCCAGCG
CGCGCGGCGTTTCTTCGTGGAGTCCCTGGCCGCCAATTGCATCGTAACAT
ACCTGCTGCAGGTGTGTGTGTGTGCTTTTTTTTTTTTTCGTACGATCGAC
CGCGCTTACGGGGTGACCAATGAAAAAGACGTCAGTCTCAGTGCGGTTGA
GAACACATAATGCTTCTAAAGGCCAAAACCTGGGACCCTGTGACCGAGCG
TCATGAGGGAGTCTACGCTTCTCTCTGGATTGAGGACAATGCGTGTGTTT
TAGTATTGACCACGCTGACCGGCTGACCAATGAAAATACGTCAGTACCAG
CGGGTACAATCAAGGTCACAGGAGGGGGCCCAAAATTTGTGGCGCCAGTC
CACGCACCTCTCTCGGTATGCACTGTGTGTTTGACGTCTCGTATCAGCCG
CGGTGTCAAAGGAAGTCCACACAGGAGCCTCTTGACTGGGAAGGAAAAGG
CCGTGCTGCAGGTGTTTGCTTTGGGGTGCATAGTTTGAGTTGGGGACTTT
TTTGTGTCGTTTTTGTGTTGTGCATGTAGAAGCGAGCTGGGGCGGACTTT
TATCTGTTTTTCTTGAGGGCGCCGACGTGCCGCCTCGACCGATTGTTCGA
AAGCATGCCTGCTGGTCGGGGTCGGGTCTTCGTGAGATCAAATCGACGCA
AACATACTCATGTCTACAATTGCAAGTACTTGTATTGAGGCACGGTCGAA
TAGAGCCATTTGCACCTTTTTTATGTGCCGTGGAAGTGAGCCAGTACCAG
CGACCAGCGATTGGTAAAGACACAAAATGACGCAGAATCACCGACACAAC
GGGTGGATATTTAGAAAGAGGGACATAGTTTTTTGTTGCTGCCAATAAAA
GGAATGAAAGACGCCCCGCCCTTGCCTCGATCCGATGTTTAATAAGACAG
ACACAAGCCATACAGTAGTATACGAGACACAAAATAAAAACAGGCTCGCT
GTGATTTCCTGCTTTGGTCCTACCTTTGCTTCTACTTGGGTTTGTATTCA
GGTGAAAGACCGCCACAACGGCAACATTCTGCTGGATGCTCGTGGCCGCG
TCATCCACATCGACTTCGGCTTTATGCTGGCGAACAGCCCGGGCGGAAAC
TTCAACTGTGAGGAGGCAGCCAAGAAACCAAGGGCATTTCTAATACTAAG
TACTTTGTAAGATTATGATTGTACTTGTAAGATGGAAGAAACCGGGTGGA
ATCGCGGCAGCTTTCATTCTCTGTGCGATGCGCTTAGACAGAAGTGTCCA
TGCCAACTTGACGACGAGTGGCGATCGATGACAGGTATCAGTCTCCGGGT
TCGAAGCACCAGGATAAGGTTAAAAAAAATGTGTGTGCATAAATACGCGT
GCTTGTGTTTCCGTTTTTAATTTTCGCACGCTTGCTTGCGCACGCTTGCT
TATCTGTCTTGTGCCATGCCGCCGGATTCCTGGATGTTCGGACGACGGCC
GCGCTGTCTCACCATACCAGTCGAGTCCGCTCCGTTCAAGCTTACGGCCG
AGTTCGTCGACCTCATGGGGGGGCCATCTTCTACCTGCTTCAAGGGCTTC
CGCGAGGTCAGTCGCTTG
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig9:1321401..1324718-

>mRNA_Ecto-sp6_S_contig9.18140.1 ID=mRNA_Ecto-sp6_S_contig9.18140.1|Name=mRNA_Ecto-sp6_S_contig9.18140.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=630bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:1321401..1324718- (Ectocarpus species6 EcLAC_371)
GTGATCTTCAAGGAACGGTGGCACCAGAAGGAGGCCCGGCTAAGGAGGGC
GTCAAAGCTGGGCCAAGCGCGAGAGTGGAGGCTGATGCCAGTCATCGTCA
AGGCCGGGGATGATCTACGGCAGGAGCAGCTGGCCTCGCAGTTCTTCGCT
CTGGCTAACCGAATCCTCAAGCAGAGCCCCCTCCGTGCAAGAGCTGGACT
CAGACCGTACGACATCGTGGCGACGTCGCACGATGCCGGGATCATCGAAG
CTATCCCTGACACCGTCTCGATCGACGCTCTCAAGAAGAACGACCCGCTC
TACACGACCCTGCTGGACTTCTTCCACCGTCACTTCGGACCCCCCGAGTC
GGAAGGTTTCCAGCGCGCGCGGCGTTTCTTCGTGGAGTCCCTGGCCGCCA
ATTGCATCGTAACATACCTGCTGCAGGTGAAAGACCGCCACAACGGCAAC
ATTCTGCTGGATGCTCGTGGCCGCGTCATCCACATCGACTTCGGCTTTAT
GCTGGCGAACAGCCCGGGCGGAAACTTCAACTTCGAGTCCGCTCCGTTCA
AGCTTACGGCCGAGTTCGTCGACCTCATGGGGGGGCCATCTTCTACCTGC
TTCAAGGGCTTCCGCGAGGTCAGTCGCTTG
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