mRNA_Ecto-sp6_S_contig9.18136.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig9.18136.1 vs. uniprot
Match: A0A6H5K2E0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2E0_9PHAE) HSP 1 Score: 498 bits (1281), Expect = 1.800e-175 Identity = 254/267 (95.13%), Postives = 262/267 (98.13%), Query Frame = 1
Query: 97 AQHNPVVIIPGGPGLPHDYLETVEGAAMEDRVVLLFDPVGTGNSSALPSVDAAADSPNLLGTASLVAQTRAVVDYFKVNAFHVLGHGTGAEAALQLGKSLGKASPRPPGPEPEAVLSVILASPVLGENELSPDFLETLRTPYIKDGDEPPLCLETAMAGRSSDGFAGGLAAMKQDRRSKGSAAAAGAGPLACPVLITYGKRDVISDKTVAGITQGLSGGDAPVESRRFEESGHLAHLDEREEYVSLVKNYVTFIDDAWSGKSGDTKK 897
AQHNPVVIIPGGPGLPHDYLET+EGAAMEDRVVLLFDPVGTGNSSALPSVDAAADSPNLLGTASLVAQTRAVVD+FKVNAFHVLGHGTGAEAAL+LG+SLGKASPRPPGPEPEA+LSVILASPVLGENELSPDFLE LRTPYIKDG+EPPLCLETAMAGRSSDGFAGG+AAM QDRRSKGSAAAA AGPLACPVLITYGKRDVI DKTV GITQGLSGGDAPVESRRFEESGHLAHLDEREEYVSLVKNYVTFIDDAWSGKSG+TKK
Sbjct: 3 AQHNPVVIIPGGPGLPHDYLETLEGAAMEDRVVLLFDPVGTGNSSALPSVDAAADSPNLLGTASLVAQTRAVVDFFKVNAFHVLGHGTGAEAALELGRSLGKASPRPPGPEPEAILSVILASPVLGENELSPDFLEALRTPYIKDGNEPPLCLETAMAGRSSDGFAGGVAAMNQDRRSKGSAAAA-AGPLACPVLITYGKRDVIGDKTVTGITQGLSGGDAPVESRRFEESGHLAHLDEREEYVSLVKNYVTFIDDAWSGKSGETKK 268
BLAST of mRNA_Ecto-sp6_S_contig9.18136.1 vs. uniprot
Match: D8LLW3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLW3_ECTSI) HSP 1 Score: 444 bits (1142), Expect = 2.190e-154 Identity = 226/232 (97.41%), Postives = 230/232 (99.14%), Query Frame = 1
Query: 1 MDFDEVFIPFKFEGYSGKLFARTVGNGKDQKKAQHNPVVIIPGGPGLPHDYLETVEGAAMEDRVVLLFDPVGTGNSSALPSVDAAADSPNLLGTASLVAQTRAVVDYFKVNAFHVLGHGTGAEAALQLGKSLGKASPRPPGPEPEAVLSVILASPVLGENELSPDFLETLRTPYIKDGDEPPLCLETAMAGRSSDGFAGGLAAMKQDRRSKGSAAAAGAGPLACPVLITYGK 696
MDFDEVFIPFKFEGYSGKLFARTVGNGKDQKKAQHNPVVIIPGGPGLPHDYLET+EGAAMEDRVVLLFDPVGTGNSSALPSVDAAADSPNLLGTASLVAQTRAVVDYFKVNAFHVLGHGT AEAAL+LG+SLGKASPRPPGPEPEAVLSVILASPVLGENELSPDFLE LRTPYIKDG+EPPLCLETAMAGRSSDGFAGGLAAMKQDRRSKGSAAAAGAGPLACPVLITYGK
Sbjct: 1 MDFDEVFIPFKFEGYSGKLFARTVGNGKDQKKAQHNPVVIIPGGPGLPHDYLETLEGAAMEDRVVLLFDPVGTGNSSALPSVDAAADSPNLLGTASLVAQTRAVVDYFKVNAFHVLGHGTSAEAALELGRSLGKASPRPPGPEPEAVLSVILASPVLGENELSPDFLEALRTPYIKDGNEPPLCLETAMAGRSSDGFAGGLAAMKQDRRSKGSAAAAGAGPLACPVLITYGK 232
BLAST of mRNA_Ecto-sp6_S_contig9.18136.1 vs. uniprot
Match: A0A7S3XPS5_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPS5_HETAK) HSP 1 Score: 143 bits (360), Expect = 2.320e-35 Identity = 100/306 (32.68%), Postives = 158/306 (51.63%), Query Frame = 1
Query: 1 MDFDEVFIPFKFEGYSGKLFARTVGNGKDQKKAQHNPVVIIPGGPGLPHDYLETVEGAAMEDRVVLLFDPVGTGNSSALPSVDAAADSPNLLGTASLVAQTRAVVDYFKVNAFHVLGHGTGAEAALQLGKSLGKASPRPPGPE-PEAVLSVILASPVLGENEL--SPDFLETLRTPYIKD--------GDEP-----PLCLETAMAGRSSDGFAGGLAAMKQDRRSKGSAAAAGAGPLACPVLITYGKRDVISDKTVAGITQGLSGGDAP---VESRRFEESGHLAHLDEREEYVSLVKNYVTFID 861
++F++ IP++ +L+ R VG+ +K+ + P++++PGGPGL HDYLET+E + R V+LFDP+GTG S P A+A SP SL+ Q V+ + +H+ HG + AL+ K L P P+ + VLSV SP +L + D LE P+ G P P+C+E + ++SD A G + R KG A+ + CP+++TYG+RD+IS+ +V + P V +E SGHLAH+DE+E Y+ +V+N++ +D
Sbjct: 89 LNFNDGVIPYQ----GSQLYIRVVGDEYYEKRVKRKPLIVLPGGPGLSHDYLETLEAVSQTQRRVVLFDPLGTGQSGPRPPAAASAGSPR-----SLLDQLNRVISELGLKEYHLFAHGYSSVVALEKLKQLSTQEDNPGKPKGKQTVLSVTFESPFAKGEDLIEAADALEAKGYPWKTSPNIQSKILGGNPDLKKTPVCMEDSY--KTSDAEAYG----PEIRALKGWNCASYVDYVKCPMIVTYGRRDLISETSVTEFKDTFTAPAKPGNEVYLSVYENSGHLAHIDEKETYIQMVQNFLDKVD 379
BLAST of mRNA_Ecto-sp6_S_contig9.18136.1 vs. uniprot
Match: A0A7S2UVU9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVU9_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 1.200e-18 Identity = 57/162 (35.19%), Postives = 87/162 (53.70%), Query Frame = 1
Query: 22 IPFKFEGYSGK-LFARTVGNGKDQKKAQHNPVVIIPGGPGLPHDYLETVEGAAMEDRVVLLFDPVGTGNSSALPSVDAAADSPNLLGTASLVAQTRAVVDYFKVNAFHVLGHGTGAEAALQLGKSLGKASPRPPGPEPEAVLSVILASPVLGENELSPDFLE 504
IP+ G + +F R VG + +KK + +P+V++PGGPGL H+YLETVE +R V+ FDP+G G SS +A+ +L +Q AV D+ ++ +H+ HG G AL+ + K G + E V S++LASP + DF+E
Sbjct: 3 IPYTANGQKDQQIFIRVVGAERREKKLKLSPLVVVPGGPGLSHNYLETVEAVGQTERRVVFFDPIGAGLSSKPQDSQSASIE-------ALASQIAAVTDFLELKEYHIYAHGFGTLVALERLDQIQKGK----GRKGERVKSIVLASPA----KSGEDFIE 149
BLAST of mRNA_Ecto-sp6_S_contig9.18136.1 vs. uniprot
Match: A0A835YII1_9STRA (Alpha/Beta hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YII1_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 2.230e-18 Identity = 67/190 (35.26%), Postives = 101/190 (53.16%), Query Frame = 1
Query: 1 MDFDEVFIPFKFEGYSGKLFARTVGNGKDQKKAQHNPVVIIPGGPGLPHDYLETVEGAAMEDRVVLLFDPVGTGNSSALPSVDAAADSPNLLGTASLVAQTRAVVDYFKVNAFHVLGHGTGAEAALQLGKSLGKASPRPPGPEPEAVLSVILASPVLGENELSPD-FLETLRTPYIKDGDEPPLCLETAM 567
+DF+E +PF+ +G+ G+LF++ P+V++P GL H YLET+E AA +DR V+L+DP+GTG SSALP+ AA + L Q +AV+ + ++ ++H+LGHGTGA LSV LASP+L +PD + L + + DG P+CL A+
Sbjct: 50 LDFEEGLVPFEADGFKGQLFSKRF------------PLVLVPSA-GLTHSYLETLEAAASDDRRVVLWDPIGTGTSSALPAPPTAAPA--------LERQLQAVLQFLELKSYHLLGHGTGAXXXXXXXXXXXXXXXX-------XALSVTLASPLLRG---TPDGYAAALLSAF--DGRAVPVCLAEAV 206
BLAST of mRNA_Ecto-sp6_S_contig9.18136.1 vs. uniprot
Match: A0A4D9CNP1_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CNP1_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 1.870e-16 Identity = 72/212 (33.96%), Postives = 104/212 (49.06%), Query Frame = 1
Query: 7 FDEVFIPFKFEGY--SGKLFARTVGNGKDQKKAQHNPVVIIPGGPGLPHDYLETVEGAAMEDRVVLLFDPVGTGNSS-ALPSVDAAADSP---------NLLGTASLVAQTRAVVDYFKVNAFHVLGHGTGAEAALQLGKSLG--KASPRPPGPEPEA----VLSVILASPVLGENELSPDFLETLRTPYIKDGDEPPLCLETAMAGRSSDG 588
F++ IP G S LF R VG+ + +K P++++PGGPGL HDY ET+E DR V+ FDPVGTG SS +LP A AD P +A L Q R ++ + +++++HV G ALQ + +SP P P P + V S+ LA P + +P +L + Y G PLC+ ++AG G
Sbjct: 72 FNDGLIPVSLPGMAASADLFLRVVGDEQKEKDQGLAPILLVPGGPGLAHDYTETLEALVYGDRRVVSFDPVGTGQSSRSLPP--ALADGPPGGAETAEWKQAWSALLQEQLREILRFLEIDSYHVWAQGAACLPALQHTAAFAPPSSSPSSPSPSPTSLARGVKSLTLADPFV----FAPG-TRSLPSLYSDRGAAVPLCVTESVAGVKGGG 276
BLAST of mRNA_Ecto-sp6_S_contig9.18136.1 vs. uniprot
Match: W7TG89_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TG89_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 7.270e-14 Identity = 64/201 (31.84%), Postives = 94/201 (46.77%), Query Frame = 1
Query: 7 FDEVFIPFKFEGYSGK--LFARTVGNGKDQKKAQHNPVVIIPGGPGLPHDYLETVEGAAMEDRVVLLFDPVGTGNSS-ALPSVDAAADSP---------NLLGTASLVAQTRAVVDYFKVNAFHVLGHGTGAEAALQLGKSLGKASPRPPGPEPEAVLSVILASPVLGENELSPDFLETLRTPYIKDGDEPPLCLETAMAG 573
F++ IP G LF R VG+ + +K P++++PGGPGL HDY ET+E DR V+ FDPVGTG SS +LP A AD P +A L Q R ++ + ++++ HV G ALQ + S P L+ + S L + + +L + Y G PLC+ ++AG
Sbjct: 62 FNDGLIPVSLPGMPAPADLFLRVVGDEQKEKDQGLAPILLVPGGPGLAHDYTETLEALVYGDRRVVSFDPVGTGQSSRSLPP--ALADGPPGGAETAEWKQAWSALLQEQLREILRFLEIDSHHVWAQGAACLPALQHTAAFAPPSSAPSXXXXXXALARGVKSLTLADPFVFAPGARSLPSLYSDRGAAVPLCVTESVAG 260
BLAST of mRNA_Ecto-sp6_S_contig9.18136.1 vs. uniprot
Match: A0A7S2RFF4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RFF4_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 9.420e-13 Identity = 34/59 (57.63%), Postives = 42/59 (71.19%), Query Frame = 1
Query: 55 LFARTVGNGKDQKKAQHNPVVIIPGGPGLPHDYLETVEGAAMEDRVVLLFDPVGTGNSS 231
L+ R G +KKAQ PV++IPGGPGLPHDY ET+EG DR V+ FDP+GTG S+
Sbjct: 54 LYLRESGTQDAEKKAQVRPVLLIPGGPGLPHDYFETLEGLVKTDRRVVEFDPIGTGQST 112
BLAST of mRNA_Ecto-sp6_S_contig9.18136.1 vs. uniprot
Match: A0A0X3VEX5_9ACTN (AB hydrolase-1 domain-containing protein n=1 Tax=Streptomyces regalis TaxID=68262 RepID=A0A0X3VEX5_9ACTN) HSP 1 Score: 75.5 bits (184), Expect = 8.840e-12 Identity = 76/268 (28.36%), Postives = 120/268 (44.78%), Query Frame = 1
Query: 109 PVVIIPGGPGLPHDYLETVEGAAMED-RVVLLFDPVGTGNSSALPSVDAAADSPNLLGTASLVAQTRAVVDYFKVNAFHVLGHGTGAEAALQ--LGKSLGKASPRPPGPEPEAVLSVILASPVLGENE-------LSPDFLETLRTPYIKDGDEPPLCLETAMAGRSSDGFAGGLAAMKQ--DRRSKGSAAAAGAGPLACPVLITYGKRDVISDKTVAGITQGLSGGDAPVESRRFEESGHLAHLDEREEYVSLVKNYVTFIDDAWSG 876
P++++ GGPG PHDYLE + A E R V+ +D +G G S D P L A+ V + AV + ++ H+LGH G++ AL+ LG+ G A VL+ LAS + E E L P+ E I + + A G + + + L + D K A G L PVLI G+ DV + V + G+ G + V FE+S HL +E E + +++++++ ++ A G
Sbjct: 31 PLLVVNGGPGCPHDYLEDLAALAGESGRAVVFYDQLGCGRSDH-------PDDPALWVMATFVEEVAAVREGLGLDRVHLLGHSWGSQVALEYALGRPAGLAG---------LVLAGPLASAPVYEAEARRLKESLPPEVQE-----IIDRHEAEGTTGDDAYEGAAMEFYKRWLCRLDPWPDHHLKDWDVTARLGELDVPVLIASGRYDVTTPAVVRPLADGIRGAEWVV----FEQSAHLPSAEEPERFRQVLESFLSRVEAADPG 273
BLAST of mRNA_Ecto-sp6_S_contig9.18136.1 vs. uniprot
Match: UPI0009B43CF4 (proline iminopeptidase-family hydrolase n=1 Tax=Burkholderia ubonensis TaxID=101571 RepID=UPI0009B43CF4) HSP 1 Score: 75.5 bits (184), Expect = 2.570e-11 Identity = 87/330 (26.36%), Postives = 122/330 (36.97%), Query Frame = 1
Query: 109 PVVIIPGGPGLPHDYLETVEGAAMEDRVVLLFDPVGTGNSSALPSVDAAADSPNLLGTASLVAQTRAVVDYFKVNAFHVLGHGTGAEAALQLGKSLGKASPRPPGPEPEAVLSVILASPVLGENELSPDFLE---TLRTPYIKDGDEPPLCLETAMAGRSSDGFAGGLAAMKQDRRSK--------------------------GSAAAAGAGPLA------------CPVLITYGKRDVISDKTVAGITQGLSGGDAPVESRRFEESGHLAHLDEREEYVSLVKNYVTFIDDAWSGKSGDTKK*PIHHSATSKVLDSRQRYSVCPPSAL 975
P+V++ GGPG PHDYLE E A + R VL +D +G G S D P L V + AV+D H+LGH G AL + PE V S++LASP L + D L P + LE A ++ A AA+ RR G A G L CPVL T G+ D I+ + A + G + V FE+S HL HL+E Y++ V+++++ ++ P +A R + PP AL
Sbjct: 37 PLVLLHGGPGCPHDYLEPFEALA-DARPVLFYDQLGCGASDR-------PDDPALWQLERFVLELEAVIDTLGPGPVHLLGHSWGTMLALDYALA-----------HPERVASLVLASPCLSMTRVRADMARLKAALPAPVL-------AVLERCEANGTTRSGAYDAAALVFYRRHLCRLAEWPQALVRAETQWGWDVYRTMWGPAEFTPTGNLGGYERETQLASLRCPVLYTCGRHDEITPDSTARYHRLTPGSECVV----FEQSAHLPHLEEPARYLATVRDFLSRVEQ------------PAPQAADVATAALEARVARLPPEAL 324 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18136.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig9.18136.1 >prot_Ecto-sp6_S_contig9.18136.1 ID=prot_Ecto-sp6_S_contig9.18136.1|Name=mRNA_Ecto-sp6_S_contig9.18136.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=300bp MDFDEVFIPFKFEGYSGKLFARTVGNGKDQKKAQHNPVVIIPGGPGLPHDback to top mRNA from alignment at Ecto-sp6_S_contig9:1266758..1270967+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig9.18136.1 ID=mRNA_Ecto-sp6_S_contig9.18136.1|Name=mRNA_Ecto-sp6_S_contig9.18136.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=4210bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:1266758..1270967+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig9:1266758..1270967+ >mRNA_Ecto-sp6_S_contig9.18136.1 ID=mRNA_Ecto-sp6_S_contig9.18136.1|Name=mRNA_Ecto-sp6_S_contig9.18136.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=900bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:1266758..1270967+ (Ectocarpus species6 EcLAC_371)back to top |