mRNA_Ecto-sp6_S_contig9.18135.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig9.18135.1 vs. uniprot
Match: A0A6H5K120_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K120_9PHAE) HSP 1 Score: 607 bits (1566), Expect = 7.520e-212 Identity = 327/344 (95.06%), Postives = 335/344 (97.38%), Query Frame = 1
Query: 1 MATAFLASSPKVAPLFTTQPLSSYSPLRSLEQRAPRRQQPLQLPHEATKRGTGRAATVVHMTPGHHSQQAQGRDAPEHERPVVASAGLSTFDPENSPTRLPSRKKPLFTPRFAALTASALAVGLAVSVLAPGTASAAVKAIVAGSEDEAHLHVGQKVAKFFRRGGLPDWATLMTISAMPVVELRGGVPVGIWMGMPIAKVFGLCVAGNMIPIPVILLALRSSFVQKLAKPVLDRAREKAAGFGDEKSQALALTLFVGIPLPGTGAWTGAMGAFLLGMPFQKASERAMLSIFVGVVSAGVIMSCLTLAGKAGALVATAVLAVFCVTSILGGGEDGGNKASDFASK 1032
MATAFLASSPKVAPLFTTQPLSSYSPLRSLEQRAPRRQQ LQL HEATKR TGRAATV H+ PGHHS+QAQGRDAPEHERPVVASAGLSTF+ E SPT LPSRKKPLFTPRFAALTASALAVGLAVSVLAPGTASAAVKAIVAGSEDEAHLHVGQKVAKFFRRGGLPDWATLMTISAMPVVELRGGVPVGIWMGMPIAKVFGLCVAGNMIPIP+ILLALRSSFVQKLAKPVLDRAREKAAGFGDEKSQALALTLFVGIPLPGTGAWTGAMGAFLLGMPFQKAS +AMLSIF+GVVSAGVIMSCLTLAGKAGALVATAVLAVFCVT++LGGGEDGGNKASDFASK
Sbjct: 17 MATAFLASSPKVAPLFTTQPLSSYSPLRSLEQRAPRRQQSLQLSHEATKRATGRAATVAHVAPGHHSRQAQGRDAPEHERPVVASAGLSTFEMETSPTGLPSRKKPLFTPRFAALTASALAVGLAVSVLAPGTASAAVKAIVAGSEDEAHLHVGQKVAKFFRRGGLPDWATLMTISAMPVVELRGGVPVGIWMGMPIAKVFGLCVAGNMIPIPIILLALRSSFVQKLAKPVLDRAREKAAGFGDEKSQALALTLFVGIPLPGTGAWTGAMGAFLLGMPFQKAS-KAMLSIFLGVVSAGVIMSCLTLAGKAGALVATAVLAVFCVTNMLGGGEDGGNKASDFASK 359
BLAST of mRNA_Ecto-sp6_S_contig9.18135.1 vs. uniprot
Match: A0A835YGM4_9STRA (Putative small multi-drug export protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGM4_9STRA) HSP 1 Score: 251 bits (640), Expect = 3.920e-75 Identity = 138/203 (67.98%), Postives = 160/203 (78.82%), Query Frame = 1
Query: 382 VLAPGTASAAVKAIVAGSE--DEAHLHVGQKVAKFFRR-GGLPDWATLMTISAMPVVELRGGVPVGIWMGMPIAKVFGLCVAGNMIPIPVILLALRSSFVQKLAKPVLDRAREKAAGFGDEKSQALALTLFVGIPLPGTGAWTGAMGAFLLGMPFQKASERAMLSIFVGVVSAGVIMSCLTLAGKAGALVATAVLAVFCVTSI 981
+L P A AAV+ + A + E HLHVGQK+A + R G LPDW T+ ISAMPVVELRGG+PVG+WMG+PIAKVFGLCVAGNM+PIP+ILLALRSS VQ + KP LDRAR KA FGD + QA+AL LFVGIPLPGTGAWTGAM A +LGMP K ++ +IF GVVSAG IM+ LTLAGKAGA+ ATAVLA+FCVTSI
Sbjct: 1 MLQPERALAAVRVVTAAAAAAPEEHLHVGQKIAMYCRTTGNLPDWLTIALISAMPVVELRGGIPVGLWMGLPIAKVFGLCVAGNMVPIPLILLALRSSAVQNVLKPFLDRARSKAKEFGDAEKQAVALLLFVGIPLPGTGAWTGAMIASILGMPVAK----SLAAIFAGVVSAGAIMTALTLAGKAGAIAATAVLAIFCVTSI 199
BLAST of mRNA_Ecto-sp6_S_contig9.18135.1 vs. uniprot
Match: A0A7S2Y2N1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y2N1_9STRA) HSP 1 Score: 209 bits (532), Expect = 8.520e-58 Identity = 122/228 (53.51%), Postives = 156/228 (68.42%), Query Frame = 1
Query: 280 ENSPTRLPSRKKPLFTPRFAALTASALAVGLAVSVLAPGTASAAVKAIVAGSEDEAHLHVGQKVAKFFRRGGLPDWATLMTISAMPVVELRGGVPVGIWMGMPIAKVFGLCVAGNMIPIPVILLALRSSFVQKLAKPVLDRAREKAAGFGDEKSQALALTLFVGIPLPGTGAWTGAMGAFLLGMPFQKASERAMLSIFVGVVSAGVIMSCLTLAGKAGALVATAVLAV 963
E+ PT SR +F + +A V +A + P +ASAA A S +E HLH+GQK+A FR+ GLPD LM ISAMPVVELRGG+PVG WMG+P+ V LCV GN+IPI +L AL++ +QK+ KPVLDRA EK+ G G EK+++LA+ LFVGIPLPGTGAWTGAMGAFLLGM F++++ +I GV+ AG+IMS L AGK GA+ AT + V
Sbjct: 105 ESVPTPHQSRWTGVFKKPAVKIAVTAALVIMAAVAVKPLSASAAEALSTAVSAEE-HLHLGQKIANQFRKTGLPDEVVLMIISAMPVVELRGGIPVGQWMGLPLLNVLALCVVGNLIPIIPLLAALKNKTIQKVMKPVLDRAAEKSKGLGSEKNRSLAVALFVGIPLPGTGAWTGAMGAFLLGMGFRESAS----AISAGVLLAGIIMSILVKAGKTGAIAATVAMIV 327
BLAST of mRNA_Ecto-sp6_S_contig9.18135.1 vs. uniprot
Match: A0A7S1UT50_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UT50_9STRA) HSP 1 Score: 204 bits (520), Expect = 5.400e-57 Identity = 115/183 (62.84%), Postives = 132/183 (72.13%), Query Frame = 1
Query: 448 HLHVGQKVAKFFRRGGLPDWATLMTISAMPVVELRGGVPVGIWMGMPIAKVFGLCVAGNMIPIPVILLALRSSFVQKLAKPVLDRAREKAA--GFGDEKSQALALTLFVGIPLPGTGAWTGAMGAFLLGMPFQKASERAMLSIFVGVVSAGVIMSCLTLAGKAGALVATAVLAVFCVTSILGG 990
HLHVGQK+A +FR GLPD L ISA+PVVELRG VPVG+WMG+PI V CV GNMIPI ILL LR+ ++KL +P+L RA +K+A G G + Q +L FVGIPLPGTGAWTGAMGAFLLGMPF A+ SIF GVVSAGVIMS LTLAG+ GAL A A LA+F LGG
Sbjct: 65 HLHVGQKIANYFRSFGLPDTVILAIISALPVVELRGAVPVGVWMGLPITTVLPACVFGNMIPIVPILLLLRNERLKKLMEPILSRAEKKSASLGVGSPEKQWASLAAFVGIPLPGTGAWTGAMGAFLLGMPFAV----ALSSIFTGVVSAGVIMSALTLAGRKGALAALAALALFTSKEFLGG 243
BLAST of mRNA_Ecto-sp6_S_contig9.18135.1 vs. uniprot
Match: A0A6S8U4Q8_9STRA (Ferredoxin--NADP(+) reductase n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A6S8U4Q8_9STRA) HSP 1 Score: 208 bits (530), Expect = 1.630e-54 Identity = 120/206 (58.25%), Postives = 139/206 (67.48%), Query Frame = 1
Query: 379 SVLAPGTASAAVKAIVAGSEDEAHLHVGQKVAKFFRRGGLPDWATLMTISAMPVVELRGGVPVGIWMGMPIAKVFGLCVAGNMIPIPVILLALRSSFVQKLAKPVLDRAREK--AAGFGDEKSQALALTLFVGIPLPGTGAWTGAMGAFLLGMPFQKASERAMLSIFVGVVSAGVIMSCLTLAGKAGALVATAVLAVFCVTSILGG 990
S P +A AI A E HLH GQKVA FFR G+PD A L ISAMPV+ELRG VPVGIWMG+PI KV CV GNM+PI +L L++ ++KL KP+LDRA +K A G G + Q +L FVGIPLPGTGAWTGAMGAFLLGMP + RA+ SIF GVVSAG+IMS +TLAGK G L A A+LA LGG
Sbjct: 112 SAAPPAALAAKSSAIAAAPEVVEHLHTGQKVANFFRSFGIPDLAILSIISAMPVIELRGAVPVGIWMGLPITKVLPACVFGNMVPIIPLLFLLKNETLKKLMKPILDRAEKKSSALGVGSPEKQWASLAAFVGIPLPGTGAWTGAMGAFLLGMP----TARAISSIFTGVVSAGLIMSAITLAGKKGGLAALAILAAVTGKEFLGG 313
BLAST of mRNA_Ecto-sp6_S_contig9.18135.1 vs. uniprot
Match: A0A7S2C209_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2C209_9EUKA) HSP 1 Score: 195 bits (496), Expect = 1.230e-53 Identity = 118/217 (54.38%), Postives = 145/217 (66.82%), Query Frame = 1
Query: 331 RFAALTASALAVGLAVSVLAPGTASAAVKAIVAGSEDEAHLHVGQKVAKFFRRGGLPDWATLMTISAMPVVELRGGVPVGIWMGMPIAKVFGLCVAGNMIPIPVILLALRSSFVQKLAKPVLDRAREKAAGFGDEKSQALALTLFVGIPLPGTGAWTGAMGAFLLGMPFQKASERAMLSIFVGVVSAGVIMSCLTLAGKAGALVATAVLAVFCVTSI 981
RF A A+AL + L V+ A AS G + AHLH GQK+A +FR+ GLPDWATL+ ISA+P VELRGGVPVG WMG+ +C+ GNM+PI ILLA RS FV+ KP++ RA +K AG +S+ LAL LFVG+P PGTGAWTGA ++LLGMPF AM +IF GVV AG+IM+ LTLAGK GALVA A L F + +I
Sbjct: 53 RFGAAAATALPLMLGVARPALALAS--------GGIEGAHLHTGQKIALYFRKFGLPDWATLVLISAVPGVELRGGVPVGNWMGLSPWATLIICILGNMLPIAPILLAFRSDFVKAKLKPLITRAEKKLAGLPKGQSRELALALFVGVPAPGTGAWTGATISYLLGMPFGT----AMGAIFAGVVIAGMIMTVLTLAGKLGALVALAALMTFGIGAI 257
BLAST of mRNA_Ecto-sp6_S_contig9.18135.1 vs. uniprot
Match: A0A7S1ZZ20_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZZ20_TRICV) HSP 1 Score: 191 bits (485), Expect = 6.930e-53 Identity = 106/184 (57.61%), Postives = 128/184 (69.57%), Query Frame = 1
Query: 448 HLHVGQKVAKFFRRGGLPDWATLMTISAMPVVELRGGVPVGIWMGMPIAKVFGLCVAGNMIPIPVILLALRSSFVQKLAKPVLDRAREKAA--GFGDEKSQALALTLFVGIPLPGTGAWTGAMGAFLLGMPFQKASERAMLSIFVGVVSAGVIMSCLTLAGKAGALVATAVLAVFCVTSILGGG 993
HLHVGQKVA +FR GLPD A L ISAMPV+ELRG VPVG+WMG+P+ V CV GNM+PI ++ LR+ ++KL P+L RA +K+A G G + Q +L FVGIPLPGTGAWTGAMGAFLLGMP + A+ +IF GVVSAGVIMS +TLAGK G + A A LA+ L G
Sbjct: 24 HLHVGQKVANYFRTFGLPDTAILALISAMPVIELRGAVPVGLWMGLPLTTVLPACVMGNMVPIVPLMFLLRNEKLKKLMSPILSRAEKKSASLGVGSLEKQWASLAAFVGIPLPGTGAWTGAMGAFLLGMP----TGLALSAIFTGVVSAGVIMSAITLAGKKGGIAALAALALITGREFLASG 203
BLAST of mRNA_Ecto-sp6_S_contig9.18135.1 vs. uniprot
Match: A0A6U3YD80_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3YD80_9STRA) HSP 1 Score: 192 bits (489), Expect = 1.500e-52 Identity = 122/233 (52.36%), Postives = 149/233 (63.95%), Query Frame = 1
Query: 244 VVASAGLSTFDPENSPTRLPSRKKPLFTPRFAALTASALAVGLAVSVLAPG----------TASAAVKAIV-----AGSEDEAH-LHVGQKVAKFFRRGGLPDWATLMTISAMPVVELRGGVPVGIWMGMPIAKVFGLCVAGNMIPIPVILLALRSSFVQKLAKPVLDRAREKAAGFGDEKSQALALTLFVGIPLPGTGAWTGAMGAFLLGMPFQKASERAMLSIFVGVVSAG 894
+ +AG+S F P PT P + L TP A++AS + + SV AP T +A V A++ A + D A LH+GQKVA+ F+ GL D + ISAMPVVELRG +PVG WMG+P+ KV GLC+ GNM+PI IL LR VQ+L KPVLDRA+ KA+ F DE+S+A+ L FVGIPLPGTGAWTGAMGAFLLGMPF AM SIF GVVSAG
Sbjct: 9 TLFAAGVSAFTPMLPPTLRPRAR--LVTP---AISASPVVLKATSSVDAPSPRWTSIAKKSTVAALVLAVLPVIARASTGDSAEVLHIGQKVARVFQGRGLSDEMVVCLISAMPVVELRGAIPVGAWMGLPLPKVLGLCIVGNMLPIAPILYLLRFGPVQRLLKPVLDRAQSKASAFKDERSRAMLLAAFVGIPLPGTGAWTGAMGAFLLGMPFPT----AMASIFAGVVSAG 232
BLAST of mRNA_Ecto-sp6_S_contig9.18135.1 vs. uniprot
Match: A0A7S0IW87_9EUKA (Hypothetical protein n=2 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IW87_9EUKA) HSP 1 Score: 193 bits (491), Expect = 1.570e-52 Identity = 133/274 (48.54%), Postives = 170/274 (62.04%), Query Frame = 1
Query: 175 VHMTPGHHSQQAQGRDAPEHERPV-VASAGLSTFDPENSPTRLPSRKKPLFT----PRFAALTASALAVGLAVSVLAPGTASAAVKAIVAGSEDEAHLHVGQKVAKFFRRGGLPDWATLMTISAMPVVELRGGVPVGIWMGMPIAKVFGLCVAGNMIPIPVILLALRSSFVQKLAKPVLDRAREKAAGFGDEKSQALALTLFVGIPLPGTGAWTGAMGAFLLGMPFQKASERAMLSIFVGVVSAGVIMSCLTLAGKAGALVATAVLAVFCVTSI 981
++ P S + Q P RPV + S L + L S LF+ P +A T++AL +GL +L+P A A+ G+E HLH+GQKVA FF++ GLP+WA LM ISA P VELRGGVPVG WMG+ A F +CV GNM+PI LLALRS+FV+KLA P+L RA +K AG +S+ LAL LFVGIP PGTGAWTGA+ A+LL MPF +M +I GV+ AGVIM+ LT+ GK GAL+A + L F V +I
Sbjct: 30 AYLLPAFSSPRLQSVVRPASHRPVSMCSTALDVVHTQKCKRPLHSG---LFSRGALPLSSATTSAALTLGLV--LLSPALALAS-----GGAE---HLHLGQKVALFFQQTGLPNWAVLMLISATPAVELRGGVPVGNWMGISPAATFLICVLGNMLPIAPTLLALRSAFVKKLAAPLLTRAEKKLAGLPKGQSRTLALALFVGIPAPGTGAWTGAIIAYLLDMPFTT----SMGAILAGVLLAGVIMTVLTVLGKFGALLALSGLIFFGVGAI 286
BLAST of mRNA_Ecto-sp6_S_contig9.18135.1 vs. uniprot
Match: A0A7S2S836_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S836_9STRA) HSP 1 Score: 194 bits (492), Expect = 2.710e-52 Identity = 107/174 (61.49%), Postives = 128/174 (73.56%), Query Frame = 1
Query: 448 HLHVGQKVAKFFRRGGLPDWATLMTISAMPVVELRGGVPVGIWMGMPIAKVFGLCVAGNMIPIPVILLALRSSFVQKLAKPVLDRAREKAA--GFGDEKSQALALTLFVGIPLPGTGAWTGAMGAFLLGMPFQKASERAMLSIFVGVVSAGVIMSCLTLAGKAGALVATAVLAV 963
HLHVGQKVA +FR G+PD A L ISA+PV+ELRG VPVG+WMG+PI V CV GNM+PI +L LR+ ++KL KP+L RA +K+A G G + Q +L FVGIPLPGTGAWTGAMGAFLLGMP + A+ SIF GVVSAG+IMS LTLAGK G + A AVLA+
Sbjct: 137 HLHVGQKVANYFRSFGIPDVAILALISALPVIELRGAVPVGLWMGLPITTVLPACVMGNMLPIIPLLFLLRNEKLKKLMKPILTRAEKKSASLGVGSVEKQWASLAAFVGIPLPGTGAWTGAMGAFLLGMP----TALAISSIFTGVVSAGLIMSALTLAGKKGGIAALAVLAI 306 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18135.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig9.18135.1 >prot_Ecto-sp6_S_contig9.18135.1 ID=prot_Ecto-sp6_S_contig9.18135.1|Name=mRNA_Ecto-sp6_S_contig9.18135.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=345bp MATAFLASSPKVAPLFTTQPLSSYSPLRSLEQRAPRRQQPLQLPHEATKRback to top mRNA from alignment at Ecto-sp6_S_contig9:1262774..1266058- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig9.18135.1 ID=mRNA_Ecto-sp6_S_contig9.18135.1|Name=mRNA_Ecto-sp6_S_contig9.18135.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=3285bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:1262774..1266058- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig9:1262774..1266058- >mRNA_Ecto-sp6_S_contig9.18135.1 ID=mRNA_Ecto-sp6_S_contig9.18135.1|Name=mRNA_Ecto-sp6_S_contig9.18135.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1035bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:1262774..1266058- (Ectocarpus species6 EcLAC_371)back to top |