mRNA_Ecto-sp6_S_contig9.18135.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig9.18135.1
Unique NamemRNA_Ecto-sp6_S_contig9.18135.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
BLAST of mRNA_Ecto-sp6_S_contig9.18135.1 vs. uniprot
Match: A0A6H5K120_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K120_9PHAE)

HSP 1 Score: 607 bits (1566), Expect = 7.520e-212
Identity = 327/344 (95.06%), Postives = 335/344 (97.38%), Query Frame = 1
Query:    1 MATAFLASSPKVAPLFTTQPLSSYSPLRSLEQRAPRRQQPLQLPHEATKRGTGRAATVVHMTPGHHSQQAQGRDAPEHERPVVASAGLSTFDPENSPTRLPSRKKPLFTPRFAALTASALAVGLAVSVLAPGTASAAVKAIVAGSEDEAHLHVGQKVAKFFRRGGLPDWATLMTISAMPVVELRGGVPVGIWMGMPIAKVFGLCVAGNMIPIPVILLALRSSFVQKLAKPVLDRAREKAAGFGDEKSQALALTLFVGIPLPGTGAWTGAMGAFLLGMPFQKASERAMLSIFVGVVSAGVIMSCLTLAGKAGALVATAVLAVFCVTSILGGGEDGGNKASDFASK 1032
            MATAFLASSPKVAPLFTTQPLSSYSPLRSLEQRAPRRQQ LQL HEATKR TGRAATV H+ PGHHS+QAQGRDAPEHERPVVASAGLSTF+ E SPT LPSRKKPLFTPRFAALTASALAVGLAVSVLAPGTASAAVKAIVAGSEDEAHLHVGQKVAKFFRRGGLPDWATLMTISAMPVVELRGGVPVGIWMGMPIAKVFGLCVAGNMIPIP+ILLALRSSFVQKLAKPVLDRAREKAAGFGDEKSQALALTLFVGIPLPGTGAWTGAMGAFLLGMPFQKAS +AMLSIF+GVVSAGVIMSCLTLAGKAGALVATAVLAVFCVT++LGGGEDGGNKASDFASK
Sbjct:   17 MATAFLASSPKVAPLFTTQPLSSYSPLRSLEQRAPRRQQSLQLSHEATKRATGRAATVAHVAPGHHSRQAQGRDAPEHERPVVASAGLSTFEMETSPTGLPSRKKPLFTPRFAALTASALAVGLAVSVLAPGTASAAVKAIVAGSEDEAHLHVGQKVAKFFRRGGLPDWATLMTISAMPVVELRGGVPVGIWMGMPIAKVFGLCVAGNMIPIPIILLALRSSFVQKLAKPVLDRAREKAAGFGDEKSQALALTLFVGIPLPGTGAWTGAMGAFLLGMPFQKAS-KAMLSIFLGVVSAGVIMSCLTLAGKAGALVATAVLAVFCVTNMLGGGEDGGNKASDFASK 359          
BLAST of mRNA_Ecto-sp6_S_contig9.18135.1 vs. uniprot
Match: A0A835YGM4_9STRA (Putative small multi-drug export protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGM4_9STRA)

HSP 1 Score: 251 bits (640), Expect = 3.920e-75
Identity = 138/203 (67.98%), Postives = 160/203 (78.82%), Query Frame = 1
Query:  382 VLAPGTASAAVKAIVAGSE--DEAHLHVGQKVAKFFRR-GGLPDWATLMTISAMPVVELRGGVPVGIWMGMPIAKVFGLCVAGNMIPIPVILLALRSSFVQKLAKPVLDRAREKAAGFGDEKSQALALTLFVGIPLPGTGAWTGAMGAFLLGMPFQKASERAMLSIFVGVVSAGVIMSCLTLAGKAGALVATAVLAVFCVTSI 981
            +L P  A AAV+ + A +    E HLHVGQK+A + R  G LPDW T+  ISAMPVVELRGG+PVG+WMG+PIAKVFGLCVAGNM+PIP+ILLALRSS VQ + KP LDRAR KA  FGD + QA+AL LFVGIPLPGTGAWTGAM A +LGMP  K    ++ +IF GVVSAG IM+ LTLAGKAGA+ ATAVLA+FCVTSI
Sbjct:    1 MLQPERALAAVRVVTAAAAAAPEEHLHVGQKIAMYCRTTGNLPDWLTIALISAMPVVELRGGIPVGLWMGLPIAKVFGLCVAGNMVPIPLILLALRSSAVQNVLKPFLDRARSKAKEFGDAEKQAVALLLFVGIPLPGTGAWTGAMIASILGMPVAK----SLAAIFAGVVSAGAIMTALTLAGKAGAIAATAVLAIFCVTSI 199          
BLAST of mRNA_Ecto-sp6_S_contig9.18135.1 vs. uniprot
Match: A0A7S2Y2N1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y2N1_9STRA)

HSP 1 Score: 209 bits (532), Expect = 8.520e-58
Identity = 122/228 (53.51%), Postives = 156/228 (68.42%), Query Frame = 1
Query:  280 ENSPTRLPSRKKPLFTPRFAALTASALAVGLAVSVLAPGTASAAVKAIVAGSEDEAHLHVGQKVAKFFRRGGLPDWATLMTISAMPVVELRGGVPVGIWMGMPIAKVFGLCVAGNMIPIPVILLALRSSFVQKLAKPVLDRAREKAAGFGDEKSQALALTLFVGIPLPGTGAWTGAMGAFLLGMPFQKASERAMLSIFVGVVSAGVIMSCLTLAGKAGALVATAVLAV 963
            E+ PT   SR   +F      +  +A  V +A   + P +ASAA     A S +E HLH+GQK+A  FR+ GLPD   LM ISAMPVVELRGG+PVG WMG+P+  V  LCV GN+IPI  +L AL++  +QK+ KPVLDRA EK+ G G EK+++LA+ LFVGIPLPGTGAWTGAMGAFLLGM F++++     +I  GV+ AG+IMS L  AGK GA+ AT  + V
Sbjct:  105 ESVPTPHQSRWTGVFKKPAVKIAVTAALVIMAAVAVKPLSASAAEALSTAVSAEE-HLHLGQKIANQFRKTGLPDEVVLMIISAMPVVELRGGIPVGQWMGLPLLNVLALCVVGNLIPIIPLLAALKNKTIQKVMKPVLDRAAEKSKGLGSEKNRSLAVALFVGIPLPGTGAWTGAMGAFLLGMGFRESAS----AISAGVLLAGIIMSILVKAGKTGAIAATVAMIV 327          
BLAST of mRNA_Ecto-sp6_S_contig9.18135.1 vs. uniprot
Match: A0A7S1UT50_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UT50_9STRA)

HSP 1 Score: 204 bits (520), Expect = 5.400e-57
Identity = 115/183 (62.84%), Postives = 132/183 (72.13%), Query Frame = 1
Query:  448 HLHVGQKVAKFFRRGGLPDWATLMTISAMPVVELRGGVPVGIWMGMPIAKVFGLCVAGNMIPIPVILLALRSSFVQKLAKPVLDRAREKAA--GFGDEKSQALALTLFVGIPLPGTGAWTGAMGAFLLGMPFQKASERAMLSIFVGVVSAGVIMSCLTLAGKAGALVATAVLAVFCVTSILGG 990
            HLHVGQK+A +FR  GLPD   L  ISA+PVVELRG VPVG+WMG+PI  V   CV GNMIPI  ILL LR+  ++KL +P+L RA +K+A  G G  + Q  +L  FVGIPLPGTGAWTGAMGAFLLGMPF      A+ SIF GVVSAGVIMS LTLAG+ GAL A A LA+F     LGG
Sbjct:   65 HLHVGQKIANYFRSFGLPDTVILAIISALPVVELRGAVPVGVWMGLPITTVLPACVFGNMIPIVPILLLLRNERLKKLMEPILSRAEKKSASLGVGSPEKQWASLAAFVGIPLPGTGAWTGAMGAFLLGMPFAV----ALSSIFTGVVSAGVIMSALTLAGRKGALAALAALALFTSKEFLGG 243          
BLAST of mRNA_Ecto-sp6_S_contig9.18135.1 vs. uniprot
Match: A0A6S8U4Q8_9STRA (Ferredoxin--NADP(+) reductase n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A6S8U4Q8_9STRA)

HSP 1 Score: 208 bits (530), Expect = 1.630e-54
Identity = 120/206 (58.25%), Postives = 139/206 (67.48%), Query Frame = 1
Query:  379 SVLAPGTASAAVKAIVAGSEDEAHLHVGQKVAKFFRRGGLPDWATLMTISAMPVVELRGGVPVGIWMGMPIAKVFGLCVAGNMIPIPVILLALRSSFVQKLAKPVLDRAREK--AAGFGDEKSQALALTLFVGIPLPGTGAWTGAMGAFLLGMPFQKASERAMLSIFVGVVSAGVIMSCLTLAGKAGALVATAVLAVFCVTSILGG 990
            S   P   +A   AI A  E   HLH GQKVA FFR  G+PD A L  ISAMPV+ELRG VPVGIWMG+PI KV   CV GNM+PI  +L  L++  ++KL KP+LDRA +K  A G G  + Q  +L  FVGIPLPGTGAWTGAMGAFLLGMP    + RA+ SIF GVVSAG+IMS +TLAGK G L A A+LA       LGG
Sbjct:  112 SAAPPAALAAKSSAIAAAPEVVEHLHTGQKVANFFRSFGIPDLAILSIISAMPVIELRGAVPVGIWMGLPITKVLPACVFGNMVPIIPLLFLLKNETLKKLMKPILDRAEKKSSALGVGSPEKQWASLAAFVGIPLPGTGAWTGAMGAFLLGMP----TARAISSIFTGVVSAGLIMSAITLAGKKGGLAALAILAAVTGKEFLGG 313          
BLAST of mRNA_Ecto-sp6_S_contig9.18135.1 vs. uniprot
Match: A0A7S2C209_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2C209_9EUKA)

HSP 1 Score: 195 bits (496), Expect = 1.230e-53
Identity = 118/217 (54.38%), Postives = 145/217 (66.82%), Query Frame = 1
Query:  331 RFAALTASALAVGLAVSVLAPGTASAAVKAIVAGSEDEAHLHVGQKVAKFFRRGGLPDWATLMTISAMPVVELRGGVPVGIWMGMPIAKVFGLCVAGNMIPIPVILLALRSSFVQKLAKPVLDRAREKAAGFGDEKSQALALTLFVGIPLPGTGAWTGAMGAFLLGMPFQKASERAMLSIFVGVVSAGVIMSCLTLAGKAGALVATAVLAVFCVTSI 981
            RF A  A+AL + L V+  A   AS        G  + AHLH GQK+A +FR+ GLPDWATL+ ISA+P VELRGGVPVG WMG+       +C+ GNM+PI  ILLA RS FV+   KP++ RA +K AG    +S+ LAL LFVG+P PGTGAWTGA  ++LLGMPF      AM +IF GVV AG+IM+ LTLAGK GALVA A L  F + +I
Sbjct:   53 RFGAAAATALPLMLGVARPALALAS--------GGIEGAHLHTGQKIALYFRKFGLPDWATLVLISAVPGVELRGGVPVGNWMGLSPWATLIICILGNMLPIAPILLAFRSDFVKAKLKPLITRAEKKLAGLPKGQSRELALALFVGVPAPGTGAWTGATISYLLGMPFGT----AMGAIFAGVVIAGMIMTVLTLAGKLGALVALAALMTFGIGAI 257          
BLAST of mRNA_Ecto-sp6_S_contig9.18135.1 vs. uniprot
Match: A0A7S1ZZ20_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZZ20_TRICV)

HSP 1 Score: 191 bits (485), Expect = 6.930e-53
Identity = 106/184 (57.61%), Postives = 128/184 (69.57%), Query Frame = 1
Query:  448 HLHVGQKVAKFFRRGGLPDWATLMTISAMPVVELRGGVPVGIWMGMPIAKVFGLCVAGNMIPIPVILLALRSSFVQKLAKPVLDRAREKAA--GFGDEKSQALALTLFVGIPLPGTGAWTGAMGAFLLGMPFQKASERAMLSIFVGVVSAGVIMSCLTLAGKAGALVATAVLAVFCVTSILGGG 993
            HLHVGQKVA +FR  GLPD A L  ISAMPV+ELRG VPVG+WMG+P+  V   CV GNM+PI  ++  LR+  ++KL  P+L RA +K+A  G G  + Q  +L  FVGIPLPGTGAWTGAMGAFLLGMP    +  A+ +IF GVVSAGVIMS +TLAGK G + A A LA+      L  G
Sbjct:   24 HLHVGQKVANYFRTFGLPDTAILALISAMPVIELRGAVPVGLWMGLPLTTVLPACVMGNMVPIVPLMFLLRNEKLKKLMSPILSRAEKKSASLGVGSLEKQWASLAAFVGIPLPGTGAWTGAMGAFLLGMP----TGLALSAIFTGVVSAGVIMSAITLAGKKGGIAALAALALITGREFLASG 203          
BLAST of mRNA_Ecto-sp6_S_contig9.18135.1 vs. uniprot
Match: A0A6U3YD80_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3YD80_9STRA)

HSP 1 Score: 192 bits (489), Expect = 1.500e-52
Identity = 122/233 (52.36%), Postives = 149/233 (63.95%), Query Frame = 1
Query:  244 VVASAGLSTFDPENSPTRLPSRKKPLFTPRFAALTASALAVGLAVSVLAPG----------TASAAVKAIV-----AGSEDEAH-LHVGQKVAKFFRRGGLPDWATLMTISAMPVVELRGGVPVGIWMGMPIAKVFGLCVAGNMIPIPVILLALRSSFVQKLAKPVLDRAREKAAGFGDEKSQALALTLFVGIPLPGTGAWTGAMGAFLLGMPFQKASERAMLSIFVGVVSAG 894
             + +AG+S F P   PT  P  +  L TP   A++AS + +    SV AP           T +A V A++     A + D A  LH+GQKVA+ F+  GL D   +  ISAMPVVELRG +PVG WMG+P+ KV GLC+ GNM+PI  IL  LR   VQ+L KPVLDRA+ KA+ F DE+S+A+ L  FVGIPLPGTGAWTGAMGAFLLGMPF      AM SIF GVVSAG
Sbjct:    9 TLFAAGVSAFTPMLPPTLRPRAR--LVTP---AISASPVVLKATSSVDAPSPRWTSIAKKSTVAALVLAVLPVIARASTGDSAEVLHIGQKVARVFQGRGLSDEMVVCLISAMPVVELRGAIPVGAWMGLPLPKVLGLCIVGNMLPIAPILYLLRFGPVQRLLKPVLDRAQSKASAFKDERSRAMLLAAFVGIPLPGTGAWTGAMGAFLLGMPFPT----AMASIFAGVVSAG 232          
BLAST of mRNA_Ecto-sp6_S_contig9.18135.1 vs. uniprot
Match: A0A7S0IW87_9EUKA (Hypothetical protein n=2 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IW87_9EUKA)

HSP 1 Score: 193 bits (491), Expect = 1.570e-52
Identity = 133/274 (48.54%), Postives = 170/274 (62.04%), Query Frame = 1
Query:  175 VHMTPGHHSQQAQGRDAPEHERPV-VASAGLSTFDPENSPTRLPSRKKPLFT----PRFAALTASALAVGLAVSVLAPGTASAAVKAIVAGSEDEAHLHVGQKVAKFFRRGGLPDWATLMTISAMPVVELRGGVPVGIWMGMPIAKVFGLCVAGNMIPIPVILLALRSSFVQKLAKPVLDRAREKAAGFGDEKSQALALTLFVGIPLPGTGAWTGAMGAFLLGMPFQKASERAMLSIFVGVVSAGVIMSCLTLAGKAGALVATAVLAVFCVTSI 981
             ++ P   S + Q    P   RPV + S  L     +     L S    LF+    P  +A T++AL +GL   +L+P  A A+      G+E   HLH+GQKVA FF++ GLP+WA LM ISA P VELRGGVPVG WMG+  A  F +CV GNM+PI   LLALRS+FV+KLA P+L RA +K AG    +S+ LAL LFVGIP PGTGAWTGA+ A+LL MPF      +M +I  GV+ AGVIM+ LT+ GK GAL+A + L  F V +I
Sbjct:   30 AYLLPAFSSPRLQSVVRPASHRPVSMCSTALDVVHTQKCKRPLHSG---LFSRGALPLSSATTSAALTLGLV--LLSPALALAS-----GGAE---HLHLGQKVALFFQQTGLPNWAVLMLISATPAVELRGGVPVGNWMGISPAATFLICVLGNMLPIAPTLLALRSAFVKKLAAPLLTRAEKKLAGLPKGQSRTLALALFVGIPAPGTGAWTGAIIAYLLDMPFTT----SMGAILAGVLLAGVIMTVLTVLGKFGALLALSGLIFFGVGAI 286          
BLAST of mRNA_Ecto-sp6_S_contig9.18135.1 vs. uniprot
Match: A0A7S2S836_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S836_9STRA)

HSP 1 Score: 194 bits (492), Expect = 2.710e-52
Identity = 107/174 (61.49%), Postives = 128/174 (73.56%), Query Frame = 1
Query:  448 HLHVGQKVAKFFRRGGLPDWATLMTISAMPVVELRGGVPVGIWMGMPIAKVFGLCVAGNMIPIPVILLALRSSFVQKLAKPVLDRAREKAA--GFGDEKSQALALTLFVGIPLPGTGAWTGAMGAFLLGMPFQKASERAMLSIFVGVVSAGVIMSCLTLAGKAGALVATAVLAV 963
            HLHVGQKVA +FR  G+PD A L  ISA+PV+ELRG VPVG+WMG+PI  V   CV GNM+PI  +L  LR+  ++KL KP+L RA +K+A  G G  + Q  +L  FVGIPLPGTGAWTGAMGAFLLGMP    +  A+ SIF GVVSAG+IMS LTLAGK G + A AVLA+
Sbjct:  137 HLHVGQKVANYFRSFGIPDVAILALISALPVIELRGAVPVGLWMGLPITTVLPACVMGNMLPIIPLLFLLRNEKLKKLMKPILTRAEKKSASLGVGSVEKQWASLAAFVGIPLPGTGAWTGAMGAFLLGMP----TALAISSIFTGVVSAGLIMSALTLAGKKGGIAALAVLAI 306          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18135.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K120_9PHAE7.520e-21295.06Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YGM4_9STRA3.920e-7567.98Putative small multi-drug export protein-domain-co... [more]
A0A7S2Y2N1_9STRA8.520e-5853.51Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S1UT50_9STRA5.400e-5762.84Hypothetical protein (Fragment) n=1 Tax=Grammatoph... [more]
A0A6S8U4Q8_9STRA1.630e-5458.25Ferredoxin--NADP(+) reductase n=2 Tax=Chaetoceros ... [more]
A0A7S2C209_9EUKA1.230e-5354.38Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
A0A7S1ZZ20_TRICV6.930e-5357.61Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A6U3YD80_9STRA1.500e-5252.36Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S0IW87_9EUKA1.570e-5248.54Hypothetical protein n=2 Tax=Calcidiscus leptoporu... [more]
A0A7S2S836_9STRA2.710e-5261.49Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig9contigEcto-sp6_S_contig9:1262774..1266058 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score625.5
Seed ortholog evalue1.4e-176
Seed eggNOG ortholog2880.D8LLW4
Model size2188
Hectar predicted targeting categoryother localisation
Exons2
EggNOG free text desc.Putative small multi-drug export protein
EggNOG OGs28NC2@1,2QUXG@2759
Ec32 ortholog descriptionPutative small multi-drug export
Ec32 orthologEc-14_001930.1
Cds size1035
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350529.75072-UTR-Ecto-sp6_S_contig9:1262773..12639261682350529.75072-UTR-Ecto-sp6_S_contig9:1262773..1263926Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig9 1262774..1263926 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350529.759799-CDS-Ecto-sp6_S_contig9:1263926..12641061682350529.759799-CDS-Ecto-sp6_S_contig9:1263926..1264106Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 1263927..1264106 -
1682350529.7689261-CDS-Ecto-sp6_S_contig9:1265203..12660581682350529.7689261-CDS-Ecto-sp6_S_contig9:1265203..1266058Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 1265204..1266058 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig9.18135.1prot_Ecto-sp6_S_contig9.18135.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig9 1263927..1266058 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig9.18135.1

>prot_Ecto-sp6_S_contig9.18135.1 ID=prot_Ecto-sp6_S_contig9.18135.1|Name=mRNA_Ecto-sp6_S_contig9.18135.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=345bp
MATAFLASSPKVAPLFTTQPLSSYSPLRSLEQRAPRRQQPLQLPHEATKR
GTGRAATVVHMTPGHHSQQAQGRDAPEHERPVVASAGLSTFDPENSPTRL
PSRKKPLFTPRFAALTASALAVGLAVSVLAPGTASAAVKAIVAGSEDEAH
LHVGQKVAKFFRRGGLPDWATLMTISAMPVVELRGGVPVGIWMGMPIAKV
FGLCVAGNMIPIPVILLALRSSFVQKLAKPVLDRAREKAAGFGDEKSQAL
ALTLFVGIPLPGTGAWTGAMGAFLLGMPFQKASERAMLSIFVGVVSAGVI
MSCLTLAGKAGALVATAVLAVFCVTSILGGGEDGGNKASDFASK*
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mRNA from alignment at Ecto-sp6_S_contig9:1262774..1266058-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig9.18135.1 ID=mRNA_Ecto-sp6_S_contig9.18135.1|Name=mRNA_Ecto-sp6_S_contig9.18135.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=3285bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:1262774..1266058- (Ectocarpus species6 EcLAC_371)
ATGGCAACGGCCTTTTTGGCCTCCTCGCCCAAAGTAGCGCCCCTATTCAC AACCCAACCCTTGTCCTCCTACTCTCCCCTCAGGAGCCTCGAGCAGCGGG CACCGCGCCGCCAACAACCTCTACAGCTACCGCACGAAGCGACGAAGCGA GGGACCGGGCGTGCTGCCACTGTGGTTCATATGACCCCTGGGCACCACTC CCAGCAGGCTCAGGGGCGCGATGCCCCTGAACATGAGCGGCCTGTTGTTG CCTCGGCGGGACTGTCAACTTTCGACCCGGAAAACAGCCCGACCCGCTTA CCTTCGCGGAAGAAGCCGTTGTTCACCCCTCGGTTTGCCGCCTTGACCGC GTCTGCGCTCGCGGTGGGGCTGGCCGTTTCCGTGCTCGCCCCGGGTACCG CATCCGCCGCAGTCAAGGCGATAGTGGCGGGGAGCGAGGACGAGGCGCAC CTGCATGTCGGTCAGAAGGTCGCCAAGTTTTTCAGGCGCGGCGGTCTGCC GGACTGGGCGACGCTCATGACGATCTCGGCGATGCCGGTGGTGGAGCTGC GCGGCGGGGTCCCCGTGGGCATCTGGATGGGCATGCCGATCGCGAAGGTC TTCGGGCTGTGCGTCGCCGGCAACATGATCCCCATCCCGGTCATCCTGCT CGCGCTGCGGTCCTCGTTCGTGCAGAAGCTGGCCAAGCCGGTGCTGGACA GGGCTAGGGAGAAGGCGGCAGGGTTCGGCGACGAGAAGAGCCAGGCCCTG GCGCTGACGCTCTTCGTGGGAATCCCGCTGCCGGGAACGGGGGCATGGAC GGGGGCGATGGGAGCGTTTTTGTTGGGCATGCCGTTCCAGAAGGCGAGTG AGCGTGTGACAGTTGTTTCGACACGCATGGGCAGGTGTAGCAATCCGAGC TCGCCCTCCTCCGCGACTGCGGAGATACGATGCGTAAACTTGCCGCTGTT TCGTTTGGTGTTGGAGCTACATACACACCGTGTGCAACATAGCAGTACGG CGAATACAAACCTTTCTGTGTTTTAATGATTTTGTCTAAAACAACCAGCA CGGGTTTGAACGAAAAATAGGACTACAGTAAAGCAAAGAGCGAGCACCGG CTGGCTATTGTACTGGGACTACGCTTTTCCACGCGCGCGTGCTTGGGCGT GCGTAAGAGGTACTCCTGCCACTTGCCTTTTTGACCCATTCAGCAGCAAC CTTTCACACGTTCTCTCTCCCTCTCTCTCTCTCTCTCTCTCTCCCTCTCT CTCGCAAAGGCAAGGCTGTTTCATGTGCGTGTTTGGTTGCGCAACCTCGT TAAATGTTGGTTTCAAACGTGAACAGTTGCGGGGCGGTACTCCCACTGCG GGTTTTCTCTCGCGCGCGTTTGGAGGGACGGGCTTAGGATGAGCTGTTGC TTTTGCCGAGCAAGCCCCGCCTCTCATCACGATCTGTCAATACGGCACAT GGTCAGCTAAAGCACGCCATCATGGCACCCACATGAGATGCTGTCGTTGT GTGTGGTTTCATCCCATTTTGTTTGGGTCCCAGTCTACTATGCGTAGGTC CCAGTCTGCTTATGCATAGACTCTACACCTCTCGGTGGATATTTGACGCA CCAGCCGGGGTCAGGCAGGAACGATGATTTTTTGTACCCTTTGTCTGCTT CAGTGTGTTGTTCCTTTGCCTCGCCTCGCCCACCTCTCTTTTCGATCGAC AAGGTGCCAGGCCAGTCCCCCGCATATGAGGTCTTCGGAAACGACGAAAC CACCTGCACTTGTTGAAAGGCAACCGAGGAGGAGACTCCCAAACATTTGT CGAATTCACCCCCAGCTTTATCGCTACGATTTTCCCCGAGTTTACCAATT TTTCCACCCTTGCTCTACGCAAGCCACCAACCGTGTTTGAAACATCGCCC CTTGGCAACTCGGACGCTAACAACCCTACCCACGCCAACGGCTTGCATGC AGGCGATGCTGTCGATATTCGTCGGTGTGGTGAGCGCCGGCGTGATCATG AGCTGCCTCACCCTCGCCGGTAAGGCCGGAGCTCTCGTCGCCACGGCCGT CCTGGCGGTGTTCTGCGTGACCAGCATACTCGGAGGGGGAGAGGACGGGG GGAACAAGGCGTCCGACTTCGCGTCCAAGTGACCGGAGATGTCAAGTGTG CGAGGTTTCCCCAGCAGGGAAACAGAAAGAAAATCAACTCGCTGGTTGTT TATTGAAAGCCATTTAGTCGTGAGACCGAGCGCCTTCTTTTTGACGAAGG GTGACGATGCTGCCTCGCGCTAAGTAGGCAGGTCGATCACTTCTCTGCGC TTTCGATTCCCGGTACTGGTGTTACCGTGCTTCGGAGGGGGGTTGAACTG AACTGGAAGTCAAAAGGAGCGCAACAGACAGCAGCCAATTTTTTTCAGAG CAGGTCGTATTGAGAGCTGCATGGTAGCGTGTGTCGCGAAGTATGAACGA ATGGCGCCCTACTGCCCGTGTTCTATGTTGATTTTCCGTTTTTTTTGTTG TGTAGAGGAAGTTCATATTGAGAAATGCGGTGACGTTTTTGGGCAGGTCG ATTCGCTCGGGGTGCGCTCTATCACACGATTTATATTTTTTCGGAAACCG CATAGTTGGGGTTCGACAGTCAGCACAGCGCGTGGTAGTGGGGTTGCCCA ACTCTGCGTTGCATGCCGTGGAATATTGTTATTTTGTTTTTTAGGGCCCC TTTTAACGCTTAAAACTTGCACCTAAAGAGAGGCCCTGAAAAACCTAGGT CGGGGGGGTACCGGGGGCCAAAGGCGGTGATTGGTCAACAGCGTAAAACA CGATGAGGCTTTTGCTGCCCGGAAAAGCGGGACTTCGGTATTGCGTGCAG CAAAAAACAATGGCAAGTTTGATAGATTTGCTGAATCGAAGTACCCGAGG TGGACTGCATCCCCTATTCACGCCCCATGATGAGCTGAACTCGTGTTGGC GCTACCGCTGACTGGACCGCATGTGGCACGCTGCCCGTGCGGAACCCACA CGCATCGCCCATTGCCCGCTGCTGGGAAGTAGCTTGTTGTTTTGCATTGA TTCTGCGAGCGAGTCAACGTTTCGCGCTGGTTGGGTTGCGGTGGAGGTTG CTTCCCAAAATGTGCGATGTAAAAAGCCAACGGCCAGTCCAAATAAGTGC TATAGAGCAAGCCTGAGGATGAGGCTTAGACTACTGGCACCGCCTGCTGA TGCTTACCTTCGTGTGTGAGCTGATTTATTTACAGGTCCCGCGTGGTGCG CATGGTCTATCGCCCTACCTGTTTGGTCACCACGC
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig9:1262774..1266058-

>mRNA_Ecto-sp6_S_contig9.18135.1 ID=mRNA_Ecto-sp6_S_contig9.18135.1|Name=mRNA_Ecto-sp6_S_contig9.18135.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1035bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:1262774..1266058- (Ectocarpus species6 EcLAC_371)
ATGGCAACGGCCTTTTTGGCCTCCTCGCCCAAAGTAGCGCCCCTATTCAC
AACCCAACCCTTGTCCTCCTACTCTCCCCTCAGGAGCCTCGAGCAGCGGG
CACCGCGCCGCCAACAACCTCTACAGCTACCGCACGAAGCGACGAAGCGA
GGGACCGGGCGTGCTGCCACTGTGGTTCATATGACCCCTGGGCACCACTC
CCAGCAGGCTCAGGGGCGCGATGCCCCTGAACATGAGCGGCCTGTTGTTG
CCTCGGCGGGACTGTCAACTTTCGACCCGGAAAACAGCCCGACCCGCTTA
CCTTCGCGGAAGAAGCCGTTGTTCACCCCTCGGTTTGCCGCCTTGACCGC
GTCTGCGCTCGCGGTGGGGCTGGCCGTTTCCGTGCTCGCCCCGGGTACCG
CATCCGCCGCAGTCAAGGCGATAGTGGCGGGGAGCGAGGACGAGGCGCAC
CTGCATGTCGGTCAGAAGGTCGCCAAGTTTTTCAGGCGCGGCGGTCTGCC
GGACTGGGCGACGCTCATGACGATCTCGGCGATGCCGGTGGTGGAGCTGC
GCGGCGGGGTCCCCGTGGGCATCTGGATGGGCATGCCGATCGCGAAGGTC
TTCGGGCTGTGCGTCGCCGGCAACATGATCCCCATCCCGGTCATCCTGCT
CGCGCTGCGGTCCTCGTTCGTGCAGAAGCTGGCCAAGCCGGTGCTGGACA
GGGCTAGGGAGAAGGCGGCAGGGTTCGGCGACGAGAAGAGCCAGGCCCTG
GCGCTGACGCTCTTCGTGGGAATCCCGCTGCCGGGAACGGGGGCATGGAC
GGGGGCGATGGGAGCGTTTTTGTTGGGCATGCCGTTCCAGAAGGCGAGTG
AGCGTGCGATGCTGTCGATATTCGTCGGTGTGGTGAGCGCCGGCGTGATC
ATGAGCTGCCTCACCCTCGCCGGTAAGGCCGGAGCTCTCGTCGCCACGGC
CGTCCTGGCGGTGTTCTGCGTGACCAGCATACTCGGAGGGGGAGAGGACG
GGGGGAACAAGGCGTCCGACTTCGCGTCCAAGTGA
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