mRNA_Ecto-sp6_S_contig9.18131.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig9.18131.1
Unique NamemRNA_Ecto-sp6_S_contig9.18131.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
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BLAST of mRNA_Ecto-sp6_S_contig9.18131.1 vs. uniprot
Match: D8LLW8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLW8_ECTSI)

HSP 1 Score: 797 bits (2059), Expect = 8.650e-290
Identity = 442/452 (97.79%), Postives = 443/452 (98.01%), Query Frame = 1 
Query:    1 MGFFDQANTTLETVWFAVLAAVSLLCFPFGIWMGRRFTILAAKLVPVVCLLLAYENLVLALSNVLSDDSKFVQIGRTTRAAVIPLFLVVTFEVAYAVHKRRSVQFCGIVFDQGHRRGVEPCSWVLRNFVGIVSVLLFVVHILVNYDIGIGDDNKAGGTGLVETQDASLHLLLALLPTTGMTALALYIAVYMWKYGNHASIVVQSTVCNGWMFLFLGTLALLGGQVPPEWCFRVVNETGQVLFLLSVIAIGREIGREVQAADNFSHFLEKENELESGGXXXXXXXXXXXXX-TSAVLRSHRPEARRPSAATAWLGDSPGTAVTGSGTGMRQRGQKEXXXXXXXXXXXXXXX-ERSGGLEAAEGLGSAAAGAVGDDDVEGGGYHRRGDGIGADGDGSGIGRDSLDDVTRIRRPRSSSKGLERGGGPRSHSFLQPKKGPALLLEAADGEGNFLSG 1350
            MGFFDQANTTLETVWFAVLAAVSLLCFPFGIWMGRRFTILAAKLVPVVCLLLAYENLVLALSNVLSDDSKFVQIGRTTRAAVIPLFLVVTFEVAYAVHKRRSVQFCGIVFDQGHRRGVEPCSWVLRNFVGIVSVLLFVVHILVNYDIGIGDDNKAGGTGLVETQDASLHLLLALLPTTGMTALALYIAVYMWKYGNHASIVVQSTVCNGWMFLFLGTLALLGGQVPPEWCFRVVNETGQVLFLLSVIAIGREIGREVQAADNFSHFLEKENELESG XXXXXXXXXXXXX TSAVLRSHRPEARRPSAATAWLGDSPGTAVTGSGTGMRQRGQK XXXXXXXXXXXX    ERSGGLE AEGLGSAAAGAVGDDDVEG GYHRRGDGIGADG+GSGIGRDSLDDVTRIRRPRSSSKGLERGGGPRSHSFLQPKKGPALLLEAADGEGNFLSG
Sbjct:    1 MGFFDQANTTLETVWFAVLAAVSLLCFPFGIWMGRRFTILAAKLVPVVCLLLAYENLVLALSNVLSDDSKFVQIGRTTRAAVIPLFLVVTFEVAYAVHKRRSVQFCGIVFDQGHRRGVEPCSWVLRNFVGIVSVLLFVVHILVNYDIGIGDDNKAGGTGLVETQDASLHLLLALLPTTGMTALALYIAVYMWKYGNHASIVVQSTVCNGWMFLFLGTLALLGGQVPPEWCFRVVNETGQVLFLLSVIAIGREIGREVQAADNFSHFLEKENELESGXXXXXXXXXXXXXXXTSAVLRSHRPEARRPSAATAWLGDSPGTAVTGSGTGMRQRGQKXXXXXXXXXXXXXRDRRERSGGLEVAEGLGSAAAGAVGDDDVEGDGYHRRGDGIGADGNGSGIGRDSLDDVTRIRRPRSSSKGLERGGGPRSHSFLQPKKGPALLLEAADGEGNFLSG 452
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BLAST of mRNA_Ecto-sp6_S_contig9.18131.1 vs. uniprot
Match: A0A835YJZ6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJZ6_9STRA)

HSP 1 Score: 240 bits (612), Expect = 2.990e-71
Identity = 122/275 (44.36%), Postives = 178/275 (64.73%), Query Frame = 1 
Query:    7 FFDQANTTLETVWFAVLAAVSLLCF-PFGIWMGRRFTILAAKLVPVVCLLLAYENLVLALSNVLSDDSKFVQIGRTTRAAVIPLFLVVTFEVAYAVHKRRSVQFCGIVFDQGHRRGVEPCSWVLRNFVGIVSVLLFVVHILVNYDIGIGDDNKAGGTG-LVETQDASLHLLLALLPTTGMTALALYIAVYMWKYGNHASIVVQSTVCNGWMFLFLGTLALLGGQVPPEWCFRVVNETGQVLFLLSVIAIGREIGREVQAADNFSHFLEKENELES 825
            FF   N+  ET  F   A V+ +C  P  ++  R   + A  L+P++C+L+ Y N++LAL + +++++    +     A V+PLFLV  FE+AY VHK RSV+FCGIVFDQGHR   EPCSW LR+ V + ++ LF++ ILV Y   IG D+ A GTG   +   AS+  +L L+P T M A++LY++++MW+YGN+ASIVV ST CN WM L LG+L +L GQ+PP   FR  N  GQ + L +++ +  E+ RE  A D+F+ FL +EN L++
Sbjct:    5 FFGLDNSEAETAIFISCAVVNGICLVPAAVFWRRTPGMTATWLMPLLCILMCYVNIILALGDSVNNNNPACLLANVVYALVVPLFLVALFEMAYTVHKTRSVKFCGIVFDQGHRINTEPCSWFLRHAVRMCALGLFILGILV-YFHSIGSDDAAAGTGGYTQFGGASVQFILCLVPATAMAAVSLYLSIFMWRYGNNASIVVHSTACNRWMLLLLGSLCMLAGQIPPAPAFRASNALGQTILLATMLVVYHEVEREAAARDHFAEFLAEENRLDT 278
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BLAST of mRNA_Ecto-sp6_S_contig9.18131.1 vs. uniprot
Match: A0A7S3Y231_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y231_HETAK)

HSP 1 Score: 181 bits (459), Expect = 7.220e-50
Identity = 101/271 (37.27%), Postives = 154/271 (56.83%), Query Frame = 1 
Query:    1 MGFFDQANTTLETVWFAVLAAVSLLCFPFGIWMGRRFTILA--AKLVPVVCLLLAYENLVLALSNVLSDDSKFVQIGRTTRAAVIPLFLVVTFEVAYAVHKRRSVQFCGIVFDQGHRRGVEPCSWVLRNFVGIVSVLLFVVHILVNYDIGIGDDNKAGGTGLVETQDAS-LHLLLALLPTTGMTALALYIAVYMWKYGNHASIVVQSTVCNGWMFLFLGTLALLGGQVPPEWCFRVVNETGQVLFLLSVIAIGREIGREVQAADNFSHFLE 804
            M FF +  + LE  +F +   +SL+     I   +R         L P+ C+++A EN +LAL   L  DS  V       + V+PLFLV++F++AY VHK RSV F  I FD+GHR+ VEP SWV+RN + +V+  L  V+ LVNY++ +G    AG +G ++   A  L + L+LLP T + A  L IA  +W YG   ++V+ +TV N W+ LFLG +  L G V P   + V +  G++  L+ +I I   I ++ Q ++ F+ FL+
Sbjct:    1 MTFFGEEESNLELTFFGIFTGISLILLIPAIIFAKRNVRFGYFVWLTPIQCVIMAIENFMLALGENLDSDSSGVTFYLALHSLVVPLFLVISFDIAYMVHKNRSVNFFCISFDEGHRKRVEPHSWVMRNLMRMVAACLVAVNALVNYNV-LGAAADAGRSGYLDWSAADPLEVTLSLLPGTVLAAFNLGIAFRLWLYGTQRALVIHATVWNEWILLFLGAMGQLAGLVAPTELYSVTSNAGEIFLLMCIIFIQYTIKKDFQLSNQFNLFLD 270
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BLAST of mRNA_Ecto-sp6_S_contig9.18131.1 vs. uniprot
Match: A0A7S1YZR4_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YZR4_TRICV)

HSP 1 Score: 167 bits (422), Expect = 7.420e-44
Identity = 109/291 (37.46%), Postives = 167/291 (57.39%), Query Frame = 1 
Query:   10 FDQANTTLETVWF----AVLAAVSLLCFPFGIWMGR-----RFTILAAKLVPVVCLLLAYENLVLALSNVLSDD----SKFVQIGRTTRAAVIPLFLVVTFEVAYAVHKRRSVQFCGIVFDQGHRRG---VEPC-SWVLRNFVGIVSVLLFVVHILVNYDIGIGD----DNKAGGTG---LVETQ---DASLHLLLALLPTTGMTALALYIAVYMWKYGNHASIVVQSTVCNGWMFLFLGTLALLGGQVPPEWCFRVVNETGQVLFLLSVIAIGREIGREVQAADNFSHFL 801
            F ++  +  TV F    +VL AV+LLC     ++GR     R    A  L P+VCL +A EN  LA S +  +D    ++FVQ     +A  +PL L+VTFE+ Y VHKRRSV FCG+ FD+G R       P  S+VLRNF+ +++V L  + I+ N+D+ +GD    D+ AG  G   LV+         HLLL+LLP+  +     Y +  +W+YG  +S+VV S++ N +   F GTLAL  GQ+ PE  F + +  G ++F ++++ +  E+ +++ AAD+F+ FL
Sbjct:    3 FIESGVSPPTVGFIISYSVLCAVALLCSVRACYIGRTRSHYRTLASARFLFPLVCLFIAIENAALAASGLFYEDKVEDNRFVQAIFALQATQVPLLLIVTFELTYLVHKRRSVNFCGMYFDEGRRVSKIITTPMKSFVLRNFIRMLAVFLLAMGIMGNFDL-LGDVTQVDSLAGRAGWWALVQDPRGWSKKGHLLLSLLPSAVLVLCCFYFSFLLWRYGTESSMVVHSSILNPYFSPFFGTLALATGQLFPERWFPLTSNVGLLVFCITLLLLMSEVDKDMVAADDFAGFL 292
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BLAST of mRNA_Ecto-sp6_S_contig9.18131.1 vs. uniprot
Match: A0A6U6D2G5_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6D2G5_9STRA)

HSP 1 Score: 159 bits (401), Expect = 8.520e-41
Identity = 101/281 (35.94%), Postives = 160/281 (56.94%), Query Frame = 1 
Query:   46 FAVLAAVSLLCFPFGIWMGRRFT-----ILAAKLVPVVCLLLAYENLVLALSNVLSDDS----KFVQIGRTTRAAVIPLFLVVTFEVAYAVHKRRSVQFCGIVFDQGHRRG---VEPC-SWVLRNFVGIVSVLLFVVHILVNYDIGIGD----DNKAGGTG---LVETQ---DASLHLLLALLPTTGMTALALYIAVYMWKYGNHASIVVQSTVCNGWMFLFLGTLALLGGQVPPEWCFRVVNETGQVLFLLSVIAIGREIGREVQAADNFSHFLEKENEL 819
            +++L  V+ LC      +G+  +     + A  L P+VCL+++ EN  LA       D+    K VQ     +A  +P+ LVV+FE+ Y VHK+R V FCG+ FD+G R       P  S++LRN + I++V+LF + I+ N+D+ +GD    D  AG  G   LV+     D   HLLL+LLPT  +   + Y +  +W+YG  +S+VV S++ N W   F GTLAL  GQV  E  F + +  G ++F+++++ +  E+ +++ AADNFS FL +  E+
Sbjct:   18 YSILCLVAFLCSIRAFHLGKTRSHYGNFVSARYLFPLVCLIMSIENAALAAQGSFFTDTVEENKLVQAVYALQALEVPILLVVSFELTYLVHKKRGVNFCGMYFDEGRRVQKIITTPVKSFLLRNLIRILAVILFAMGIVGNFDL-LGDVSTVDELAGRAGWWSLVKDPRPWDQKWHLLLSLLPTAVLALCSFYFSFLLWRYGTESSMVVHSSILNPWFNPFFGTLALAVGQVFSEKWFPLTSNIGLLIFVITLLLLMVEVDKDMVAADNFSVFLTEAAEM 297
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BLAST of mRNA_Ecto-sp6_S_contig9.18131.1 vs. uniprot
Match: A0A7S4RTW4_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RTW4_9STRA)

HSP 1 Score: 155 bits (391), Expect = 4.040e-39
Identity = 102/301 (33.89%), Postives = 158/301 (52.49%), Query Frame = 1 
Query:    1 MGFFD---QANTTLETVWFAVLAAVSLLCFPFGIWMGR-----RFTILAAKLVPVVCLLLAYENLVLALSNVLS-----DDSKFVQIGRTTRAAVIPLFLVVTFEVAYAVHKRRSVQFCGIVFDQGHR--RGVEPC---SWVLRNFVGIVSVLLFVVHILVNYDI---GIGDDNKAGGTG---LVETQD----------ASLHLLLALLPTTGMTALALYIAVYMWKYGNHASIVVQSTVCNGWMFLFLGTLALLGGQVPPEWCFRVVNETGQVLFLLSVIAIGREIGREVQAADNFSHFL 801
            M F D   +  TT     + +L    L CF   + +G+     R       L+P+ C +LA E   LA S + S     DD+ ++QI    +A  +P+ L  TFE  Y VHKRRSV FCG+ FD+G R  RG+      S++LRNF+  ++VLL V+ ++VN+D+    +  D  AG  G   L E ++           + HL L+LLPT  +   + Y +  +W+YG  +S+VV S+  N W  LF GT+ L  G+   E  + + + TG VLF++S + +  E+ ++++AA  F  FL
Sbjct:    1 MTFIDPSAEPPTTGMITGYIILVIAFLFCFLKAVRLGQTRSHYRSFFAIRFLLPLCCFILAVETATLAASGIYSENKSLDDNVWIQIVYVIQAFEVPILLQSTFETCYLVHKRRSVNFCGMYFDEGRRVNRGIATTPMKSFILRNFIRAIAVLLLVMGLVVNFDLLRNVVEVDRLAGRAGWWPLFERKNNAEGQQLDFSENTHLFLSLLPTAILILCSFYFSALLWRYGTESSMVVHSSCWNPWFSLFFGTIFLFIGECFSEKWYPISSNTGFVLFIISYLHLMTEVDKDMKAASEFVEFL 301
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BLAST of mRNA_Ecto-sp6_S_contig9.18131.1 vs. uniprot
Match: A0A8K1CT76_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CT76_PYTOL)

HSP 1 Score: 149 bits (375), Expect = 3.660e-37
Identity = 82/257 (31.91%), Postives = 148/257 (57.59%), Query Frame = 1 
Query:   46 FAVLAAVSLLCFPFGIWMGRRF-TILAAKLVPVVCLLLAYENLVLALSNVLSDDSKFVQIGRTTRAAVIPLFLVVTFEVAYAVHKRRSVQFCGIVFDQGHRR--GVEPCSWVLRNFVGIVSVLLFVVHILVNYDIGIGDDNKAGGTGLVETQ-DASLHLLLALLPTTGMTALALYIAVYMWKYGNHASIVVQSTVCNGWMFLFLGTLALLGGQVPPEWCFRVVNETGQVLFLLSVIAIGREIGREVQAADNFSHFLE 804
            F + AAV+L+ F F +   R++ T+ A  L P +C  L ++N V+A S  L+ DS  V+      + VIP+ L+V +EVAY VHK++SV FCGI F+ GHRR  G    S   R FV ++++ L V+ +L +Y      +  A    +   + D++ H + +++P   +  L+LYI + +W YG   S +V +T  N W+++ +G++ALL G + PE  + + +  G+++ + +++ + RE+  ++Q      +F++
Sbjct:   18 FWIFAAVALVLFYFAMGYARKYRTVAAFVLPPFICFCLIFDNAVMATSG-LNRDSSTVRAMLAFHSCVIPMILLVCYEVAYLVHKQKSVNFCGISFESGHRRMLGRNALSTCQRFFVWLIAIALLVIDLLASYH---WQNEPAEIKSVYALEGDSTTHAVFSVVPALVLVLLSLYIGLQLWNYGTFYSYMVHATCFNPWIWMLVGSIALLTGYLMPEPLYALTSNAGELIMVATIVRMFREVHHDMQQGQQMRNFID 270
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BLAST of mRNA_Ecto-sp6_S_contig9.18131.1 vs. uniprot
Match: A0A7R9U8D5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U8D5_9STRA)

HSP 1 Score: 142 bits (359), Expect = 4.750e-35
Identity = 80/276 (28.99%), Postives = 145/276 (52.54%), Query Frame = 1 
Query:    1 MGFFDQANTTLETVWFAVLAAVSLLCFPFGIWMGRRFTILAAKLVPVVCLLLAYENLVLALSNVLSDDSKFVQIGRTTRAAVIPLFLVVTFEVAYAVHKRRSVQFCGIVFDQGHRRGVEPCSWVLRNFVGIVSVLLFVVHILVNYDIGIGDDNKAGGTGLVETQDA-SLHLLLALLPTTGMTALALYIAVYMWKYGNHASIVVQSTVCNGWMFLFLGTLALLGGQVPPEWCFRVVNETGQVLFLLSVIAIGREIGREVQAADNFSHFLEKENELES 825
            M F  ++N   E   ++V   V  L     +     F    A L  +   ++ +EN VL   + + ++           A +IPL LV  FE+AY VHK RSV+FCGI FD+GHR+     S+++R     ++  +  ++ILVN+D+   DD  AG TG    +   + H++ A+LP+  +     YI+V +W YG++ S+ V ++  N W  +F+G +A + GQ+  +  + V +  G+ + L ++  +   I R+++  ++F+ +L ++ E E+
Sbjct:   36 MTFLGESNENYEYACYSVFILVLSLDLAVAVSYASVFR--TACLGAITAAIMIFENAVLLAGDRVDEEGALAGATGIVHAFIIPLLLVYVFELAYQVHKHRSVKFCGITFDEGHRKSFGLKSFLVRRSTQFIATAIVAMNILVNFDLLSVDDEDAGSTGYAGLERGENAHIIFAILPSIILALYVAYISVALWLYGSNNSMTVYTSFVNPWGIVFVGGIAQVAGQIFNDEHYPVTSNGGETVLLSTIAFLIPHIVRDLEDVESFAKYLAEQEEEET 309
[Close]
BLAST of mRNA_Ecto-sp6_S_contig9.18131.1 vs. uniprot
Match: A0A7S2KLA8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KLA8_9STRA)

HSP 1 Score: 139 bits (351), Expect = 9.490e-35
Identity = 87/238 (36.55%), Postives = 128/238 (53.78%), Query Frame = 1 
Query:   46 FAVLAAVSLLCFPFGIWMGR-----RFTILAAKLVPVVCLLLAYENLVLALSNVLSDDS----KFVQIGRTTRAAVI------PLFLVVTFEVAYAVHKRRSVQFCGIVFDQGHR-RGVEPCSWVLRNFVGIVSVLLFVVHILVNYDI---GIGDDNKAGGTG---LVE---TQDASLHLLLALLPTTGMTALALYIAVYMWKYGNHASIVVQSTVCNGWMFLFLGTLALLGGQVPPE 684
            + +L  VSL C  + I +GR     R       L P+  L+LA EN  LA S  L   +      V++    RA  +      P+ L+V FEV Y +HKRRSV FCG+ FD+G R    +  S +LRN +  ++ +L V+ ++VN+D     +  D  AG  G   L E   T    LHLLL+LLP   + A++ Y++  MW+YG  +S++V S++CN W + F GTLA+  GQ+  E
Sbjct:   19 YVILTLVSLACTIWAIQLGRHRTHYRLFFSVRVLFPIAILILALENATLAASGKLMAQTIEGISVVEVHPLVRAIFVLQTFEVPILLIVMFEVTYLIHKRRSVNFCGMYFDEGRRLNNTQAMSCMLRNSIRSLATVLLVMGLMVNFDFITSNVPIDELAGRAGWWTLFEEEGTFQQELHLLLSLLPIAVLVAVSFYLSTMMWRYGTSSSMIVHSSICNPWFYCFFGTLAMAAGQLFAE 256
[Close]
BLAST of mRNA_Ecto-sp6_S_contig9.18131.1 vs. uniprot
Match: A0A6A4G4R5_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A4G4R5_9STRA)

HSP 1 Score: 135 bits (339), Expect = 8.850e-32
Identity = 82/272 (30.15%), Postives = 141/272 (51.84%), Query Frame = 1 
Query:   46 FAVLAAVSLLCFPFGIWMGRRFTILAAKLV-PVVCLLLAYENLVLALSNVLSDDSKFVQIGRTTRAAVIPLFLVVTFEVAYAVHKRRSVQFCGIVFDQGHRRGVEPCS------------WV---LRNFVGIVSVLLFVVHILVNYDIGIGDDNKAGGTGLVETQ-DASLHLLLALLPTTGMTALALYIAVYMWKYGNHASIVVQSTVCNGWMFLFLGTLALLGGQVPPEWCFRVVNETGQVLFLLSVIAIGREIGREVQAADNFSHFLEKE 810
            F V   V ++ F F +   ++++  AA L+ P +C  L ++N ++A + +        Q      A V P+ L+V +E+AY VHK +SV FCGI F+ GHR     C             W+   LR FV +V   L V+++LV Y      D       + E Q D++ H + A+LP   + ALALYI + +W YG + S +V +T  N W+++ +G +ALL G + P   + + +  G+++ + +++ + RE+  ++Q    F  F++ E
Sbjct:   19 FWVFVGVGVVLFYFSLGYAKKYSTTAAFLLTPFICFSLVFDNAIMATTGI-DRRRASTQAMLAFHACVTPMLLLVCYELAYMVHKHKSVNFCGISFESGHRERGSSCDNAGAASSLARRRWLSTCLRFFVWLVGCALLVLNLLVAYRWT--SDLTPEIASMYELQGDSTAHAVCAILPALVLVALALYIGLRLWNYGTNYSYMVHATCFNPWIWMLVGAVALLVGYLMPSPIYALSSNAGELIMMATIVRMFREVHHDMQQGLQFGEFIDPE 287
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18131.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLW8_ECTSI8.650e-29097.79Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YJZ6_9STRA2.990e-7144.36Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3Y231_HETAK7.220e-5037.27Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S1YZR4_TRICV7.420e-4437.46Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A6U6D2G5_9STRA8.520e-4135.94Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S4RTW4_9STRA4.040e-3933.89Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A8K1CT76_PYTOL3.660e-3731.91Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7R9U8D5_9STRA4.750e-3528.99Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2KLA8_9STRA9.490e-3536.55Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
A0A6A4G4R5_9STRA8.850e-3230.15Uncharacterized protein n=3 Tax=Phytophthora TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig9contigEcto-sp6_S_contig9:1221719..1228593 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score797.3
Seed ortholog evalue3.6e-228
Seed eggNOG ortholog2880.D8LLW8
Model size1353
Hectar predicted targeting categorysignal peptide
Exons7
EggNOG OGs28NE5@1,2QUZP@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-14_001970.1
Cds size1353
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig9.18131.1prot_Ecto-sp6_S_contig9.18131.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig9 1221719..1228593 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350529.233261-CDS-Ecto-sp6_S_contig9:1221718..12218531682350529.233261-CDS-Ecto-sp6_S_contig9:1221718..1221853Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 1221719..1221853 +
1682350529.2442317-CDS-Ecto-sp6_S_contig9:1224671..12247741682350529.2442317-CDS-Ecto-sp6_S_contig9:1224671..1224774Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 1224672..1224774 +
1682350529.2533784-CDS-Ecto-sp6_S_contig9:1225349..12254441682350529.2533784-CDS-Ecto-sp6_S_contig9:1225349..1225444Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 1225350..1225444 +
1682350529.2692277-CDS-Ecto-sp6_S_contig9:1225909..12260521682350529.2692277-CDS-Ecto-sp6_S_contig9:1225909..1226052Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 1225910..1226052 +
1682350529.2781258-CDS-Ecto-sp6_S_contig9:1226658..12268661682350529.2781258-CDS-Ecto-sp6_S_contig9:1226658..1226866Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 1226659..1226866 +
1682350529.2870643-CDS-Ecto-sp6_S_contig9:1227341..12274311682350529.2870643-CDS-Ecto-sp6_S_contig9:1227341..1227431Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 1227342..1227431 +
1682350529.2950544-CDS-Ecto-sp6_S_contig9:1228014..12285931682350529.2950544-CDS-Ecto-sp6_S_contig9:1228014..1228593Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 1228015..1228593 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig9.18131.1

>prot_Ecto-sp6_S_contig9.18131.1 ID=prot_Ecto-sp6_S_contig9.18131.1|Name=mRNA_Ecto-sp6_S_contig9.18131.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=451bp
MGFFDQANTTLETVWFAVLAAVSLLCFPFGIWMGRRFTILAAKLVPVVCL
LLAYENLVLALSNVLSDDSKFVQIGRTTRAAVIPLFLVVTFEVAYAVHKR
RSVQFCGIVFDQGHRRGVEPCSWVLRNFVGIVSVLLFVVHILVNYDIGIG
DDNKAGGTGLVETQDASLHLLLALLPTTGMTALALYIAVYMWKYGNHASI
VVQSTVCNGWMFLFLGTLALLGGQVPPEWCFRVVNETGQVLFLLSVIAIG
REIGREVQAADNFSHFLEKENELESGGEGGGAAAGAAASATSAVLRSHRP
EARRPSAATAWLGDSPGTAVTGSGTGMRQRGQKEEEEVEEEGARRRDRRE
RSGGLEAAEGLGSAAAGAVGDDDVEGGGYHRRGDGIGADGDGSGIGRDSL
DDVTRIRRPRSSSKGLERGGGPRSHSFLQPKKGPALLLEAADGEGNFLSG
*
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mRNA from alignment at Ecto-sp6_S_contig9:1221719..1228593+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig9.18131.1 ID=mRNA_Ecto-sp6_S_contig9.18131.1|Name=mRNA_Ecto-sp6_S_contig9.18131.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=6875bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:1221719..1228593+ (Ectocarpus species6 EcLAC_371)
ATGGGCTTCTTCGACCAAGCTAACACGACGCTGGAGACGGTATGGTTCGC
CGTGCTGGCTGCCGTTTCGCTGCTCTGCTTCCCGTTCGGAATCTGGATGG
GCCGCCGCTTTACTATCCTCGCTGCGAAGCTCGTGGTGAGAGGCCACATT
TCAAGGGACAGCTTGTTAGTGCGCTATGCGTGCCACCCGTTTCAAAGCAT
GGCGTGAGATGGGGGGATAAGTTGCGCTTGTTATCTAGTTGCTTTCAGCA
GCGGTAGACGTATCCAGTTTGTACACCAGCGGCAGCAAAATGTAGTCAGT
TCATTGTATACACCCACCGACTGTTTGCCGACGAGGATTCTTGGCACGCA
CGTCATACACACTCTAATGGGGCTGCGGTGCATCAACCACACCGCACTTG
GTGGCATCACTTTGGCCTCCCCCCCGTGGTGCTTGCACCAGGTATTCTCG
GAGCCGGGCGGCAAGCCAAAACCAAAAATCAATCATGTCTGTCGACTGCT
GTCGACTTACTGTCGACAGGCAACGTGGCTTTGGTGTTTTTCGCCAAAAA
GCGTCGTGTGTGTGCCGGTTGAGTGTTTTCGGCCGTTCCGACTACAGAGC
GATCGATCTGTCTTACTGCCTGAAAAAGTCCGTGCATGTGCTTGAGATAT
CATGCTTTTTCGACACACGCATCCCGCATAAGATGCGTGTTTCTTCGCCC
TGCAGGGCTTGCGTAGGGGCGAGCTTTGTCCCCAACGTTCCAAATTCATG
ATCGGCCACTCACTGCCTTCGGCACCACCGCCGTTGTTCAACAAATCGGA
CCACCTCCCAATCAACCACACCACGTGTCCTCGATTTCGCTGTTTCCGGA
TAAAATTCCGAATAACGTCTCACGTGTGCATGTTGCGTATGACGCCCCGA
AACTTTTCTCTAATCCGCGCTGGGAGTGTGAAGTTTGAAATCGCAGTAAA
CTTCGGATGGCGTGCCTAACTAGATAATATTATAGACACCCAGACACGAC
TACTGCGCAACCCACGTTCGCAATGCTGCAATCAAGTTTGCACGCGTACG
TCTATGAACACCACAGCTTGCGCGCACGAATATAAAAGCCCGGGCACGTT
AGTCATGCGTATGTGCGCAGTCAGGTATCTACAGGAGTACAGTAAGGTTG
AGATGCCAGATGCCAGCGCATTTAACTACGAATATTTTCTGAAAACGTTC
CGATCCTGGCCGCTGCCCCCTCGTGCCTGATCTCCAAAAGGTACACCGCC
AAGAGTTGGCGAGCCCGGCATCCTTTGCGTTTTTTTGAAAATATGCAACC
AATCACAGAACGACGACTCTTTCGAGACGCAGTGCCTATTTGTCACGGGT
ACATACGTTGTTAATAATGTGCCGGTTGAACAACAATGCCACTTGCTCGG
TATACTTGTGAAAAGCATTGTCGGTGAAATCGCTCGACCGAAAGTACAAG
GAGTGCCGGTGCGATCGTTTCCCCGGGCTGCCTCCAATGGTGCCGGTTCA
AGGCCACAAGGCCGCACACACCCACTCATACACCTGCTGTACTCCTCCTG
CTGCTGTACCCCACGCGCACGCGCCAGCAGAGGTAATTCCACGTAACTAC
CGTGTCCATGCGGCACGTCGTAGAGCCGTGCCATGCCCTCTCGTAGAGCC
GTGTACCACGCCAGCTGCAAGCTCGTCCGCCAGTAGCCCCTGACGGCCAC
GCATGCAGAGGGAACGTGGCTGGCGCGCCCACGTCACATGCTGCAGACAA
AGATAACAGTCGCATCTGCCGTGTTTAATACTTTTGACGCAACGCAAGCC
GCCCAAGCCAGCAACCGCGAAAAGCTAGCACCGGGATATGCGCACCCGAA
AACACCGAAGCCCCGCAAACAGGAAAGGCGGGAAAAACTTTCATGTTGCT
CCGGTACAGTACTGGCTCCAGTGTGCTGCGGTGCTGTTGCGGTTTTCAGC
CGGGGCTGATCGGGGTTTCGCTATAGCAATTGCCTCAATGGCTATGCGAC
ACCCCTGCTTTGTCATGTCAATTCGGGTTAACACGGCAGTGTCGGTGGAG
GTGTTGCTTTTGTTCTACAAGTGGCTTTGGGTAGTGGCCACGGAAGAATA
ACTACACGTGCATCTTGCGTACAAGACACTCGCAGACATGGACACATCAA
GTAGTCGGGCATGAAGCACGTCACGTGGACGGCCCTACGCTGTGCCGCAG
GTACAGCAGCAACACACGGAATCCATTCTACGTCAATCATGTTTTCCGGC
AACCGCGCAACGTGGCCCGTTCATCCAACACTCTGATAGGCCCGGTGCGT
GAAGGTGCTACACTTTACCGCAGTACAGCAGTACAGCAGTCAATTCTTCT
TCAGTGGTACCGGTATTGGCAATGTTAATGTTGTGGCCAGTTCTATGCGT
ATGTTGTGCCTACGCCCGGTTAATTGACGGGCGCATGCTGGCGCCTTTTC
AAGCCCCCCCCACTGCTGTATGCTCCACCCTCCTACTCGGCACGCTGCTC
CTCCTTCGTCGTTCCAGCACATTTTTATGCCCACGCTGCCATGTACAGTC
TCTCCGATCCTTCCTGAGCTGTCCCCGCAGCCTCTCTCCGCCAGTAGAGG
ATATTTAGCTTGGTTTTAGCAGGGGGGTTAGGGCTAGGGATTGGGATACG
AACCCCCCCTCTCTATTTCATTGACTAACAATGAGTTCCCCCGCAAAGGC
GGTCCCAGTAGCTGCTGCCCTAGTCCGGCGTCCACTCCGAGGTCTTAGGG
ATATGCACCAACATTCTGCCGGCAGGATATGGTTCGAAATGCTTTCCTGG
GCTCTTCTCTTCCCCTCCTTGTCTTGTCGCCGCTCCGCAACCGTCGCATG
GATATTTATTGTAGTCGAAAATGAGCGTCAAGAATCTTCACCCCCCCACC
CCCCCCCACCCCTCCCTCCGTGACTTCGCACGGATTTCCCCTTCCTTCTT
CAGCCGGTTGTTTGTCTGCTGCTGGCTTATGAGAACCTCGTCTTAGCTCT
GAGCAATGTGCTGTCGGACGACTCAAAGTTCGTCCAGATCGGGAGAACAA
CGCGCGGTGACGAAAACGAAAACGGAAGGGAAGGGGGAATCTTGAACGGT
TTTCCGGGAGGAGGAGGTCTTTTCGGTAGCCGCACGGACGGCCTGCATGG
CGATTCGGAACTTTGTCCGACACTCTATATTAACTTGTCGATTTTGATGT
CACGGTTAGTTTTCCGCTAGAGGACGCGCGTCTTTTTCGGTAGCCGCACG
GACGGCCTGCATGGCGTGTGTAGACACTCCCAGCCGCGTGACATGCTCCT
CTTTGTCCGACACTCTATATTAACTTGTCGCGGTAGGTGTCACGGTTTAA
GAGGAACCGGCGAGATTCGTGACACAACTTTCCGGCCCCGCTTCCGTCGC
GGTGACGCCCCCCCCCCCAAATAAGTCATTACGCACCTTCCCGTGCGCTC
ATCGCGCATGCACCACTCGCGTACAGTCAACAAGCTTCCGATTCTTGCTT
GATGAGGTGTACCGCTGGAGTGTCATGCGGCGGTTGGGGGTGTCTCCAAG
AGCGCACAGGGCCGCCGCCCCCGAACCAATCCTCTCTTTATTTCTCTCTC
TCTCTCTCGCGTTTTTCTCTTGCTATTCCAGCTGCGGTCATCCCGCTGTT
CTTGGTGGTGACATTCGAGGTGGCGTACGCTGTACACAAGCGCCGCTCTG
TCCAGTTCTGCGGCATCGTGTTCGACGTGAGTCCATTTTCCACGTTCACA
CGGAGCTGTCCTTACGACGAGGTGTAGTCGTGGGGCGCGTGGCCAATCGT
TTTCGTCGATTGCATTTCGCGTGCACACAGCAGTTGATATTCGACACGAG
GACGCGTATTTTCTAGTGGTGGCAGTGAGCAGTACACAAGCGCAAGACAC
CATTCTGCCGGACGGCATTCGAAGGAGCTGCTACAGAGTATCACCCATGG
TACATATCTCAATTTCGATGTGTTTGTTGCGTTGGCATAGCTCTCCATGC
GGCGGTAGTTACTCTTTCTCACGCTTCGTCCCGAGGGACACGCAGGAGGC
TCGTCGGTACATACGAACAGAGCCGTGCGGTCTGCCGCTATGCTTTGGTC
CCGCTTTTCTCTTTTTCGGGATATACTAGCCCGCCGCCTGCTCGGCCTCC
ATCATTTTTATACAAGCGTTTTTTTTTTAATCTCTTTGCAGCAAGGTCAC
CGGCGGGGCGTGGAGCCGTGTTCCTGGGTTCTTCGCAACTTCGTGGGCAT
CGTGTCGGTCTTGCTCTTCGTGGTGCATATCCTCGTGAACTACGACATCG
GAATCGGGGACGACAACAAGGCGGGGGGCACAGGGTGAGAAGTTTGCACG
TTTAATTGTATCAGGAGATCAGGAGTTTCTATCCACCCCTGCGCGGCAGC
ATTTTAATTTGGAGTCACGTCGACAGTTGAAGGGGCCATctaagcgcaac
TTTGTTTCTTCTCATTCtTGAGAtTTGTTCAACTTAAAGACCTGTCTATT
TTTTTTTGTCCACGTTGAAGGCTTGTAGTTTTACCGTTCATCTGCCCAAG
TCGGCGGGATTGCTTGTCGTGTTGCACCTTCGCGTGTCGTCGACGTCTGT
TCTCGGCTGAGATATCGAGTTTCACTGTTGGGATCTTTGTAAAACGTGTT
GAGCCCCAATCTCGTTGCACGATGTTTTTCTTGTTTCGACTTTTGTGCAA
GCTCTTGACTGCTGTCTGCCTGTCTAGCCGCTGTTGTTTAGGGTACGTGC
AAGCCCGAGAGCACCTCTTCCGCCGCCACTCTCCTCCGCTCTCCTCCTGT
CCCCTGTTCGATCGGTTTCGCCCTCCTCAATTGCGTTTCACGTTTGTTTG
ACCATTTCATACCGTTCGCTTTTGCCAACGAAACGGAACGCACGCACGGA
TTCGACGGACGGACGGACGGACGGACGGACGCACACACAGTCTTGTGGAA
ACCCAAGACGCGAGCCTACACCTTCTTCTCGCGCTGCTGCCGACGACGGG
CATGACGGCGCTCGCCCTCTACATCGCGGTGTACATGTGGAAGTACGGCA
ACCACGCGTCGATCGTGGTCCAGTCGACGGTGTGCAACGGTTGGATGTTT
CTCTTTCTCGGAACGCTGGCGTTGTTGGGGGGTCAGGTTCCACCGGAGGT
GAGTCGACACGTACCGTGGGGGCACCGCAGGGTGAGAACAGATATgggGG
GGGGGGAGGGGGGTACTCTTGTTTTGCATGCCTTAGCAGTTAGACCATTG
ACCACGCGTCCTCGAGAGGACGGAGCATTGTTCCCACAGGATCCATCACG
GATGACCAATCGTTCCTTCCTACTTTGCCAAAGGTGGCTTAACATTGGGG
GGGTGCTTGGTCGCTGGCTGGTACTGACGATGCAACGTGTTGCACTTGCT
GTGTGGGAGTTTGCATTCATGCACGCCGCAGACATGCGATGGACTGTGCG
TCCTGGTGTGACACGTTTAGAAAAGCGGAGGGACCGGGGGGTCCGGTGGC
TGCAAGATTGCCATCCCGTTTCGTGTTCTTCGTAGGGAAGAAAGGATGTT
ATTGGGAAGAAAGGATGGGAATAATTTTTTGCTCTGGCTTTGCCTGTTTT
CGGGACGGCTTGCGCGCACGCAGTGGTGCTTCCGGGTGGTGAACGAGACG
GGGCAAGTGCTGTTTCTCCTCTCGGTGATTGCCATCGGTCGTGAGATTGG
AAGAGAAGTGCAGGTGAGAGAGATTGAAAGATGTGTGCTGCTGCTGCAAC
GCTGTTATTGAACAGCCAGTCTGCACGCCTGAAAAAATAGAGGCGTATTC
TGTTGACGCACCCGATACGCCATTACAGCAGTATGGAGCGGCCAGTCTCG
ACACCGGAAAACCGGAGAAAAAACACGTCGACTTGACTTTCCAGCAATGA
CAAACTCGTCCAGTTCTACGAAGAATTGGGCGAACGGTTTCCCTCTAAGA
TAGCCAGTTTTTTTCTCCCTCCCGGTTGTACGGAACAATGAAGTACTTGA
AGTGGTAGTAGTGTTTTTTCGGCACAAAAAGGGAAATCCACGTTATATAT
CTAGAGTCGGGATGGAAGCGCTCTGTTGACACTCCGTGGTGTTGCGGTCA
CAGCAGCAGTAGAGGCTGTTCCTTGGGCTTGTTTTTCGTCTACGATGATG
ACAATATAAAGGTGCACCGGAGTCCCGGACTGCCCACATCTGATGACGAA
AACGGGTACATCAGAGTCCCGGATTGCCCACAATCTACCCGTTCGTCCCG
GGCGCGCCGCTCTCTCACCGATCGCCCGTTGTTCTGCACTTTTCAGGCAG
CCGACAACTTCTCTCACTTCCTGGAGAAAGAGAACGAGTTGGAAAGCGGG
GGAGAAGGAGGAGGAGCAGCGGCGGGTGCGGCGGCGTCGGCTACCTCTGC
CGTCTTGAGGAGTCACCGCCCGGAGGCGCGGAGGCCATCGGCGGCGACGG
CGTGGCTGGGGGACTCGCCGGGGACGGCAGTAACCGGCTCGGGAACGGGC
ATGAGACAGCGGGGGCAGAAGGAGGAGGAGGAGGTGGAGGAGGAGGGGGC
GAGGCGCAGAGATAGACGAGAGAGATCGGGCGGGCTGGAAGCGGCGGAAG
GGCTTGGGAGTGCGGCAGCTGGCGCTGTGGGTGATGATGACGTGGAAGGG
GGCGGGTACCACCGCCGCGGAGATGGCATCGGCGCCGATGGCGACGGCAG
TGGGATCGGTAGAGATAGTCTCGACGACGTCACGCGGATCCGAAGGCCTA
GGTCTTCGTCGAAGGGTTTAGAAAGAGGAGGGGGGCCAAGGTCGCATAGC
TTCCTCCAGCCGAAGAAGGGCCCCGCGTTGCTGCTCGAGGCTGCCGACGG
AGAAGGGAATTTTCTCTCCGGGTAA
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig9:1221719..1228593+

>mRNA_Ecto-sp6_S_contig9.18131.1 ID=mRNA_Ecto-sp6_S_contig9.18131.1|Name=mRNA_Ecto-sp6_S_contig9.18131.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1353bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:1221719..1228593+ (Ectocarpus species6 EcLAC_371)
ATGGGCTTCTTCGACCAAGCTAACACGACGCTGGAGACGGTATGGTTCGC
CGTGCTGGCTGCCGTTTCGCTGCTCTGCTTCCCGTTCGGAATCTGGATGG
GCCGCCGCTTTACTATCCTCGCTGCGAAGCTCGTGCCGGTTGTTTGTCTG
CTGCTGGCTTATGAGAACCTCGTCTTAGCTCTGAGCAATGTGCTGTCGGA
CGACTCAAAGTTCGTCCAGATCGGGAGAACAACGCGCGCTGCGGTCATCC
CGCTGTTCTTGGTGGTGACATTCGAGGTGGCGTACGCTGTACACAAGCGC
CGCTCTGTCCAGTTCTGCGGCATCGTGTTCGACCAAGGTCACCGGCGGGG
CGTGGAGCCGTGTTCCTGGGTTCTTCGCAACTTCGTGGGCATCGTGTCGG
TCTTGCTCTTCGTGGTGCATATCCTCGTGAACTACGACATCGGAATCGGG
GACGACAACAAGGCGGGGGGCACAGGTCTTGTGGAAACCCAAGACGCGAG
CCTACACCTTCTTCTCGCGCTGCTGCCGACGACGGGCATGACGGCGCTCG
CCCTCTACATCGCGGTGTACATGTGGAAGTACGGCAACCACGCGTCGATC
GTGGTCCAGTCGACGGTGTGCAACGGTTGGATGTTTCTCTTTCTCGGAAC
GCTGGCGTTGTTGGGGGGTCAGGTTCCACCGGAGTGGTGCTTCCGGGTGG
TGAACGAGACGGGGCAAGTGCTGTTTCTCCTCTCGGTGATTGCCATCGGT
CGTGAGATTGGAAGAGAAGTGCAGGCAGCCGACAACTTCTCTCACTTCCT
GGAGAAAGAGAACGAGTTGGAAAGCGGGGGAGAAGGAGGAGGAGCAGCGG
CGGGTGCGGCGGCGTCGGCTACCTCTGCCGTCTTGAGGAGTCACCGCCCG
GAGGCGCGGAGGCCATCGGCGGCGACGGCGTGGCTGGGGGACTCGCCGGG
GACGGCAGTAACCGGCTCGGGAACGGGCATGAGACAGCGGGGGCAGAAGG
AGGAGGAGGAGGTGGAGGAGGAGGGGGCGAGGCGCAGAGATAGACGAGAG
AGATCGGGCGGGCTGGAAGCGGCGGAAGGGCTTGGGAGTGCGGCAGCTGG
CGCTGTGGGTGATGATGACGTGGAAGGGGGCGGGTACCACCGCCGCGGAG
ATGGCATCGGCGCCGATGGCGACGGCAGTGGGATCGGTAGAGATAGTCTC
GACGACGTCACGCGGATCCGAAGGCCTAGGTCTTCGTCGAAGGGTTTAGA
AAGAGGAGGGGGGCCAAGGTCGCATAGCTTCCTCCAGCCGAAGAAGGGCC
CCGCGTTGCTGCTCGAGGCTGCCGACGGAGAAGGGAATTTTCTCTCCGGG
TAA
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