mRNA_Ecto-sp6_S_contig9.18115.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig9.18115.1 vs. uniprot
Match: A0A6H5JFJ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFJ8_9PHAE) HSP 1 Score: 808 bits (2088), Expect = 9.060e-290 Identity = 487/588 (82.82%), Postives = 504/588 (85.71%), Query Frame = 1
Query: 37 MEDDAALRDVVKKALEGKGVLAQIRASLRAAVFTVVDEHERTAGVHVPNPAALAVKHDTVGRLSLQVVADFLEHWELHQTLSVLKLETDMATEDLLSTEELGSIVANGAVVGKGEMKTPEGKNSPVMLQLLAACRAAPRDKENEFPLGAAXXXXXXXXXXAGDRSERLIGEHKGWEGKEGRQEAEEEGEDGGRRSTTWRGVGVEGEDVPPRVTLRKRRGDHGGTNGTSVSGMGNGSGGEDANEPVPSVSPEPISSATAGEREGDRXXXXXXXXXDAEESRSGGLLLRKQPTAADDKDGGEDNGGRQGRWEPHFDGRMDESSYDFSENVESVRGGGEDPIVAAAASGVDGXXXXXXXXXXXXXXXXXX--VTTENTALVEQAGVYGRSYEGEEDDGPRREEGDRFSRHAGANDSPYGXXXXXXXLRNGNGDSLAGFGGSSDNGGGVEKEPRSSVDGGVASGVDEWNEDYYEXXXXXXXXXXXXXXXXXXAGSAGGNSAADVAAKVAANAGDGEVEEEALLTGGGGTHQDGLFDPEGSRGRVSAEQEERIADLEWEARVGLSADSSVSASPMEEDGMDGPAYEIVDAQSI 1794
M+DDA LRDVVKKALEGKGVLAQIRASLRAAVFTVVDEHERTAGVHVPNPAAL VKHDTVGRL+LQVVADFLEHWELHQTLSVLKLETDMATED LSTEELGSIVANGA VGKGE KTP+GK SPVMLQLLAACRAAPRD+EN PLGAA A DRSERLIGE KG + +EGRQEAEE EDGGRR TTWRGVGVEG+ VPPRVTLRKRRGDHGGT+GTSVSGMGNGSGGEDANEP SV EP+SSATAGEREGDR DAEESR GGLLLR+QPTAADD GED G Q RWE HFDGRMDESSYDFSENVESV+G GEDP+VAA XXXXXXXXXXXXXXXXXX VT+EN ALVEQAGVY RS EG+EDDGPRREEGDRFS+HAGAN+S YGXXXXXX LRNGNGDSLAGFGGSSDNGGGVEKEPRSSVDGGVASGVDEWNEDYYE XXXXX X G SAADVAAKVAANAGDGEVE+EALL GGGTHQDG FDPEGSRGRVSAEQEERIADLEWEARVGLSADSSVSASPMEEDGMDGPAYEIVDAQSI
Sbjct: 1 MDDDADLRDVVKKALEGKGVLAQIRASLRAAVFTVVDEHERTAGVHVPNPAALVVKHDTVGRLALQVVADFLEHWELHQTLSVLKLETDMATEDFLSTEELGSIVANGAAVGKGETKTPDGKPSPVMLQLLAACRAAPRDRENGLPLGAA----------AADRSERLIGEDKGRKEEEGRQEAEEGEEDGGRRGTTWRGVGVEGDGVPPRVTLRKRRGDHGGTSGTSVSGMGNGSGGEDANEPAWSVPSEPVSSATAGEREGDRQSRERENDGDAEESRFGGLLLREQPTAADDIYRGEDKSGGQDRWEHHFDGRMDESSYDFSENVESVKGAGEDPMVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXVTSENAALVEQAGVYDRSCEGKEDDGPRREEGDRFSKHAGANNS-YGXXXXXXVLRNGNGDSLAGFGGSSDNGGGVEKEPRSSVDGGVASGVDEWNEDYYEDDDFDGXXXXXIXNDD------GDISAADVAAKVAANAGDGEVEDEALLAEGGGTHQDGFFDPEGSRGRVSAEQEERIADLEWEARVGLSADSSVSASPMEEDGMDGPAYEIVDAQSI 571
BLAST of mRNA_Ecto-sp6_S_contig9.18115.1 vs. uniprot
Match: D8LLY1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLY1_ECTSI) HSP 1 Score: 791 bits (2043), Expect = 1.240e-283 Identity = 467/528 (88.45%), Postives = 470/528 (89.02%), Query Frame = 1
Query: 217 GRLSLQVVADFLEHWELHQTLSVLKLETDMATEDLLSTEELGSIVANGAVVGKGEMKTPEGKNSPVMLQLLAACRAAPRDKENEFPLGAAXXXXXXXXXXAGDRSERLIGEHKGWEGKEGRQEAEEE-GEDGGRRSTTWRGVGVEGEDVPPRVTLRKRRGDHGGTNGTSVSGMGNGSGGEDANEPVPSVSPEPISSATAGEREGDRXXXXXXXXXDAEESRSGGLLLRKQPTAADDKDGGEDNGGRQGRWEPHFDGRMDESSYDFSENVESVRGGGEDPIVAAAASGVDGXXXXXXXXXXXXXXXXXXVTTENTALVEQAGVYGRSYEGEEDDGPRREEGDRFSRHAGANDSPYGXXXXXXX-LRNGNGDSLAGFGGSSDNGGGVEKEPRSSVDGGVASGVDEWNEDYYEXXXXXXXXXXXXXXXXXXAGSAGGNSAADVAAKVAANAGDGEVEEEALLTGGGGTHQDGLFDPEGSRGRVSAEQEERIADLEWEARVGLSADSSVSASPMEEDGMDGPAYEIVDAQSI 1794
GRLSLQVVADFLEHWELHQTLSVLKLETDMATEDLLSTEELGSIVANGAVVGKGEMKTPEGK SPVMLQLLAACRAAPRDKENEFPLGAA AGDRSERLIGEHKGWEG+EGRQEAEEE GEDGGRRSTTWRGVGVEG+ VPPRVTLRKRRGDHGGTNGTSV GMGNGSGGEDANEP SVS EPISSATAG REGDR DAEESR GGLLLRKQPTAADDKDGGEDNGG QGRWE HFDGRMDE SYDFSENVESVRGGGEDPIVAAAASGVDG XXX XXXXXXXXXVTTENTA+VEQAGVY RSYEGEEDDG RREEGDRFSRHAGANDSPYG LRNGNGDSLAGFGGSSDNG GVEKEPRSSVDGGVASGVDEWNEDYYE XXXXXXXXXXXXXXX NSAADVAAKVAANAGDGEVEEEALLTGG GTHQDGLFDPEGSRGRVSAEQEERIADLEWEARVGLSADSSVSASPMEEDGMDGPAYEIVDAQSI
Sbjct: 4 GRLSLQVVADFLEHWELHQTLSVLKLETDMATEDLLSTEELGSIVANGAVVGKGEMKTPEGKTSPVMLQLLAACRAAPRDKENEFPLGAAATATAT----AGDRSERLIGEHKGWEGEEGRQEAEEEEGEDGGRRSTTWRGVGVEGDGVPPRVTLRKRRGDHGGTNGTSVCGMGNGSGGEDANEPASSVSSEPISSATAGVREGDRQSRERESDGDAEESRFGGLLLRKQPTAADDKDGGEDNGGGQGRWEHHFDGRMDEDSYDFSENVESVRGGGEDPIVAAAASGVDGDGXXXESISXXXXXXXXXVTTENTAIVEQAGVYDRSYEGEEDDGHRREEGDRFSRHAGANDSPYGGGGGGDGALRNGNGDSLAGFGGSSDNGVGVEKEPRSSVDGGVASGVDEWNEDYYEDDDXXXXXXXXXXXXXXXXXXXXXNSAADVAAKVAANAGDGEVEEEALLTGGDGTHQDGLFDPEGSRGRVSAEQEERIADLEWEARVGLSADSSVSASPMEEDGMDGPAYEIVDAQSI 527
BLAST of mRNA_Ecto-sp6_S_contig9.18115.1 vs. uniprot
Match: D7FK22_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK22_ECTSI) HSP 1 Score: 135 bits (339), Expect = 1.490e-34 Identity = 68/69 (98.55%), Postives = 68/69 (98.55%), Query Frame = 1
Query: 217 GRLSLQVVADFLEHWELHQTLSVLKLETDMATEDLLSTEELGSIVANGAVVGKGEMKTPEGKNSPVMLQ 423
GRLSLQVVADFLEHWELHQTLSVLKLETDMATEDLLSTEELGSIVANGAVVGKGEMKTPEGK SPVMLQ
Sbjct: 4 GRLSLQVVADFLEHWELHQTLSVLKLETDMATEDLLSTEELGSIVANGAVVGKGEMKTPEGKTSPVMLQ 72
BLAST of mRNA_Ecto-sp6_S_contig9.18115.1 vs. uniprot
Match: A0A7S1CMI0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CMI0_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 5.390e-11 Identity = 47/132 (35.61%), Postives = 73/132 (55.30%), Query Frame = 1
Query: 55 LRDVVKKALEGKGVLAQIRASLRAAVFTVVDEHERTAGVHVPNPAALAVKHDTVGRLSLQVVADFLEHWELHQTLSVLKLETDMATEDLLSTEELGSIVANGAVVGKGEMKTPEGKNSPVMLQLLAACRAAP 450
+++ V + LE GVL+ IRA LRAAV++ V+E ER AGV++ NP + GR+ L +V +FLE + + TLSV E A+ D ++ E + +G EG+ ++ Q+LA +AAP
Sbjct: 17 VKESVSRILEANGVLSTIRAHLRAAVYSAVEEQERAAGVYLENPLVKTLHESDSGRVMLALVREFLEFYNMEATLSVFLPE---ASADKVNAER----ARLQSELGLAAPAAGEGERC-LLSQVLARAQAAP 140
BLAST of mRNA_Ecto-sp6_S_contig9.18115.1 vs. uniprot
Match: A0A7S2WGI0_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WGI0_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 4.210e-10 Identity = 39/97 (40.21%), Postives = 56/97 (57.73%), Query Frame = 1
Query: 55 LRDVVKKALEGKGVLAQIRASLRAAVFTVVDEHERTAGVHVPNPAALAVKHDTVGRLSLQVVADFLEHWELHQTLSVLKLETDMATEDLLSTEELGS 345
L+D+V + LE KGVL IRA LRAAV T +DE ER GV++ NP K G L L ++ ++ E + L +T+SV E + + +D +L S
Sbjct: 9 LKDIVARTLEAKGVLGTIRAQLRAAVHTALDEQERVNGVYLENPRLQLAKESEEGLLLLSLINEYFEFYSLDRTVSVFGPEANWSPDDYPGRPQLVS 105
BLAST of mRNA_Ecto-sp6_S_contig9.18115.1 vs. uniprot
Match: A0A7S2WFJ2_9STRA (Hypothetical protein (Fragment) n=3 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WFJ2_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 7.470e-10 Identity = 39/97 (40.21%), Postives = 56/97 (57.73%), Query Frame = 1
Query: 55 LRDVVKKALEGKGVLAQIRASLRAAVFTVVDEHERTAGVHVPNPAALAVKHDTVGRLSLQVVADFLEHWELHQTLSVLKLETDMATEDLLSTEELGS 345
L+D+V + LE KGVL IRA LRAAV T +DE ER GV++ NP K G L L ++ ++ E + L +T+SV E + + +D +L S
Sbjct: 9 LKDIVARTLEAKGVLGTIRAQLRAAVHTALDEQERVNGVYLENPRLQLAKESEEGLLLLSLINEYFEFYSLDRTVSVFGPEANWSPDDYPGRPQLVS 105
BLAST of mRNA_Ecto-sp6_S_contig9.18115.1 vs. uniprot
Match: A0A2R5GRB5_9STRA (FGFR1 onco partner n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GRB5_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 6.930e-9 Identity = 38/95 (40.00%), Postives = 54/95 (56.84%), Query Frame = 1
Query: 55 LRDVVKKALEGKGVLAQIRASLRAAVFTVVDEHERTAGVHVPNPAALAVKHDTVGRLSLQVVADFLEHWELHQTLSVLKLETDMATEDLLSTEEL 339
L+ +V + LE KGVL IRA LRAAVFT +DE ER GV++ N +K +L L ++ +F E +EL +TLSV E + ++L
Sbjct: 23 LKHIVSRTLEAKGVLGTIRAQLRAAVFTALDEQERANGVYLENYRVQKIKSSPESKLLLALMHEFFEFYELDRTLSVFMPEATWTQAEYPGRQQL 117
BLAST of mRNA_Ecto-sp6_S_contig9.18115.1 vs. uniprot
Match: A0A6P8Z323_THRPL (FGFR1 oncogene partner-like n=1 Tax=Thrips palmi TaxID=161013 RepID=A0A6P8Z323_THRPL) HSP 1 Score: 67.8 bits (164), Expect = 2.450e-8 Identity = 41/88 (46.59%), Postives = 51/88 (57.95%), Query Frame = 1
Query: 37 MEDDAALRDVVKKALEGKGVLAQIRASLRAAVFTVVDEHERTAGVHVPNPAALAVKHDTVGRLSLQVVADFLEHWELHQTLSVLKLET 300
+E+D LRD+V K LE GVLA+IRA LRA+VF ++E E AG N A L L +V +FLE+ EL TLSV ET
Sbjct: 3 VEEDTELRDLVSKTLENNGVLAKIRAELRASVFLALEEQENKAGPF-ENKALKEYLKSPQAALGLCIVREFLEYLELDFTLSVYNTET 89
BLAST of mRNA_Ecto-sp6_S_contig9.18115.1 vs. uniprot
Match: UPI00188EFE4B (centrosomal protein 43 isoform X1 n=2 Tax=Talpa occidentalis TaxID=50954 RepID=UPI00188EFE4B) HSP 1 Score: 67.0 bits (162), Expect = 3.730e-8 Identity = 50/149 (33.56%), Postives = 75/149 (50.34%), Query Frame = 1
Query: 25 APRIMEDDAALRDVVKKALEGKGVLAQIRASLRAAVFTVVDEHERTAG-VHVPNPAALAVKHDTVGRLSLQVVADFLEHWELHQTLSVLKLETDM-----ATEDLLSTEELGSIVANGAVVGKGEMKTPEGKNSPVMLQLLAACRAAPR 453
AP E+D LRD++ + LE GVLA+I+A LRAAVF ++E E+ + N + GRL +VA+FL+ + L TL+V + ET E+L +LG I A G V G P++L+++ C+ R
Sbjct: 5 APAAAEEDTELRDLLVQTLESNGVLARIKAELRAAVFLALEEQEKVENKTPLVNESLKKFLTTKDGRLVASLVAEFLQFFNLDFTLAVFQPETSTLHGLEGRENL--ARDLGIIEAEGTVGG------------PLLLEVIRRCQQKER 139
BLAST of mRNA_Ecto-sp6_S_contig9.18115.1 vs. uniprot
Match: A0A812ZNM4_9DINO (Cep43 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812ZNM4_9DINO) HSP 1 Score: 67.4 bits (163), Expect = 4.140e-8 Identity = 35/81 (43.21%), Postives = 48/81 (59.26%), Query Frame = 1
Query: 55 LRDVVKKALEGKGVLAQIRASLRAAVFTVVDEHERTAGVHVPNPAALAVKHDTVGRLSLQVVADFLEHWELHQTLSVLKLE 297
++ +V + LE GVLA IRA LRAAVFT +DE ER G+H N + D G + L ++ +FLE + L T +VL E
Sbjct: 10 VKGMVAQTLENSGVLASIRAQLRAAVFTAIDEEERKQGIHGANTRFQELADDPAGPVMLSLLREFLEFYNLQHTSNVLASE 90 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18115.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig9.18115.1 >prot_Ecto-sp6_S_contig9.18115.1 ID=prot_Ecto-sp6_S_contig9.18115.1|Name=mRNA_Ecto-sp6_S_contig9.18115.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=599bp HLSSHIPNAPRIMEDDAALRDVVKKALEGKGVLAQIRASLRAAVFTVVDEback to top mRNA from alignment at Ecto-sp6_S_contig9:1088828..1097801- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig9.18115.1 ID=mRNA_Ecto-sp6_S_contig9.18115.1|Name=mRNA_Ecto-sp6_S_contig9.18115.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=8974bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:1088828..1097801- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig9:1088828..1097801- >mRNA_Ecto-sp6_S_contig9.18115.1 ID=mRNA_Ecto-sp6_S_contig9.18115.1|Name=mRNA_Ecto-sp6_S_contig9.18115.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1797bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:1088828..1097801- (Ectocarpus species6 EcLAC_371)back to top |