mRNA_Ecto-sp6_S_contig9.18082.1 (mRNA) Ectocarpus species6 EcLAC_371
|
Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig9.18082.1 vs. uniprot
Match: A0A6H5JLR1_9PHAE (Aa_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JLR1_9PHAE) HSP 1 Score: 800 bits (2067), Expect = 1.460e-287 Identity = 429/439 (97.72%), Postives = 433/439 (98.63%), Query Frame = 1
Query: 1 MSGGGEGSQAASEEGDKSGMSASVFNLAKNILGAGMLSLPNGVAAFSDSRKAIVPASLIIAALGAVSAYTFVLIGRSCAETNAESYEQSWARTVGQKSAWVPAGACVATCFAGCLAFTIIIGDSFSALAKTFGAPALVAKRSNIIMAVSATVLLPLSLLKNLKSLGFTSMLGTSGLVYTAVMMAIRFFDGSYAAGGKFHALLPAAGAPVFDAKGTNPICFLVLVSMLSTAYEAHFNAPLFYRELKDNTVPRYSKMVSISFLASVATMTAVTAFGFLTFGGASSGYILNNYATTDRLATVARVAVASSLVFSYPLCFVGLRDGIREMRGAKPGETRNRTRWTVGLLAGVTAASLKLTDLGFVNSFGGALIGSGIVYVFPALMFLKPLMRKFKDKAVAAAAAAGQKREMSLNAGIVAVGVAMGVLGCVISVLETFTNVLGI 1317
MSGGGEG QAASEEGDKSGMSASVFNLAKNILGAGMLSLPNGVAAFSDS+KAI+PASLIIA LGAVSAYTFVLIGRSCAETNAESYEQSWARTVGQ+SAWVPAGACVATCFAGCLAFTIIIGDSFSALAKTFGAPALVAKRSNIIMAVSATVLLPLSLLKNLKSLGFTSMLGTSGLVYTAVMMAIRFFDGSYAAGGKFHALLPAAGAPVFDAKGTNPICFLVLVSMLSTAYEAHFNAPLFYRELKDNTVPRYSKMVS SFLASVATMTAVTAFGFLTFGGASSGYILNNYATTDRLATVARVAVASSLVFSYPLCFVGLRDGIREM GAKPGETRNRTRWTVGLLAGVTAASLKLTDLGFVNSFGGALIGSGIVYVFPALMFLKPLMRKFKDKAVAAAAAAGQKREMSLNAGIVA GVAMGVLGCVISVLETFTNVL +
Sbjct: 81 MSGGGEGGQAASEEGDKSGMSASVFNLAKNILGAGMLSLPNGVAAFSDSKKAIIPASLIIAVLGAVSAYTFVLIGRSCAETNAESYEQSWARTVGQRSAWVPAGACVATCFAGCLAFTIIIGDSFSALAKTFGAPALVAKRSNIIMAVSATVLLPLSLLKNLKSLGFTSMLGTSGLVYTAVMMAIRFFDGSYAAGGKFHALLPAAGAPVFDAKGTNPICFLVLVSMLSTAYEAHFNAPLFYRELKDNTVPRYSKMVSTSFLASVATMTAVTAFGFLTFGGASSGYILNNYATTDRLATVARVAVASSLVFSYPLCFVGLRDGIREMGGAKPGETRNRTRWTVGLLAGVTAASLKLTDLGFVNSFGGALIGSGIVYVFPALMFLKPLMRKFKDKAVAAAAAAGQKREMSLNAGIVAAGVAMGVLGCVISVLETFTNVLAV 519
BLAST of mRNA_Ecto-sp6_S_contig9.18082.1 vs. uniprot
Match: A0A6S9E4U8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9E4U8_HETAK) HSP 1 Score: 375 bits (964), Expect = 6.040e-121 Identity = 212/426 (49.77%), Postives = 290/426 (68.08%), Query Frame = 1
Query: 64 ASVFNLAKNILGAGMLSLPNGVAAFSDSRKAIVPASLIIAALGAVSAYTFVLIGRSCAETNAESYEQSWARTVGQKSAWVPAGACVATCFAGCLAFTIIIGDSFSALAKTFGAPALVAKRSNIIMAVSATVLLPLSLLKNLKSLGFTSMLGTSGLVYTAVMMAIRFFDGSYAAGGKFHALLPAAGAPVFDAKGTN--PICFLVLVSMLSTAYEAHFNAPLFYRELKDNTVPRYSKMVSISFLASVATMTAVTAFGFLTFGGASSGYILNNYATTDRLATVARVAVASSLVFSYPLCFVGLRDGIREMRGAKPGETRNRTRWTVGLLAGVTAASLKLTDLGFVNSFGGALIGSGIVYVFPALMFLKPLMRKFKDKAVAAAAAAGQ-------KREMSLNAGIVAVGVAMGVLGCVISVLETFTNVLG 1314
AS+FNL K+I+GAG+L+LP GVAAFSD+ A+ A+ + A+G +SAY F LIGR CA +A++Y +WA+++ K+AW+PA AC GC+ ++IIIGD+ SALA+TFG PA++A R+NI++ ++ V+ PL LLKNLKSL FTS+LG G VYT V MAIR DGSY GG+F +PA P F+ KG + + L+LVSMLSTA+ AH+NAP FY +LK+ +VPRY+K+V SF ++ ++ AFGFLTFGGAS G++LNNY+ D L T+ARV + S++F YPL FVGLRDG+ + G +++ +VGLL T ASL L +LGFV+SFGGAL GS ++Y+FP LM + KDK A G+ +RE LN+ I +GV +G +G +SVL+ FT VLG
Sbjct: 80 ASIFNLVKSIVGAGVLALPGGVAAFSDAPGAMAAAAGLTGAMGLLSAYCFSLIGRVCAAYDAKTYFDAWAKSISPKTAWLPAFACNFKTLIGCILYSIIIGDTASALAQTFGLPAVLAARTNILLLLTGGVIFPLCLLKNLKSLQFTSLLGIGGTVYTGVAMAIRLLDGSYRTGGRFAGSIPAQ--PSFNVKGGSMAQLSSLILVSMLSTAFIAHYNAPKFYHDLKEKSVPRYNKVVYASFACAILAFVSINAFGFLTFGGASLGFVLNNYSKADTLITLARVGIFCSILFGYPLVFVGLRDGMLSLAGISNPDSKTFFASSVGLLGFATLASLVLNNLGFVSSFGGALFGSMVIYIFPTLM----MNAAIKDKT-----AKGEWEMTPQLQREQLLNSFICGLGVLLGGVGATVSVLKNFTKVLG 494
BLAST of mRNA_Ecto-sp6_S_contig9.18082.1 vs. uniprot
Match: D7FJZ0_ECTSI (Aa_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJZ0_ECTSI) HSP 1 Score: 360 bits (925), Expect = 2.550e-115 Identity = 204/427 (47.78%), Postives = 279/427 (65.34%), Query Frame = 1
Query: 25 QAASEEGDKSGMSA--SVFNLAKNILGAGMLSLPNGVAAFSDSRKAIVPASLIIAALGAVSAYTFVLIGRSCAETNAESYEQSWARTVGQKSAWVPAGACVATCFAGCLAFTIIIGDSFSALAKTFGAPALVAKRSNIIMAVSATVLLPLSLLKNLKSLGFTSMLGTSGLVYTAVMMAIRFFDGSYAAGGKFHALLPAAGAPVFDAKGTNPICFLVLVSMLSTAYEAHFNAPLFYRELKDNTVPRYSKMVSISFLASVATMTAVTAFGFLTFGGASSGYILNNYATTDRLATVARVAVASSLVFSYPLCFVGLRDGIREMRGAKPGETRNRTRWTVGLLAGVTAASLKLTDLGFVNSFGGALIGSGIVYVFPALMFLKPLMRKFKDKAVAAAAAAGQKREMSLNAGIVAVGVAMGVLGCVISVLETF 1299
QA E SG++ S+FNL KN++GAG+L++P GV AFS SR A+VP +I ALG +S Y F LIGR CA T A SY +W++T+G+K++W+P +C A F C+A++IIIGD F+ + FGAP ++A R+NI+ VSA VLLPL LLK+L +L +TS++G G VYTA +M IR+FD SY GG+F A L PVF G L+LVSMLSTA+ AHFNAP FY ELKD +VPR++ +V SF A++ + +T F +LTFGGAS +ILNN+AT+DRLAT R+A+ASS+V YPL F+G + G G R T LL TA + LTDLGFV SFGGA++GS +V++FP +M++ + KD ++ E+ N I A+GVA+ VLG +S+ ++F
Sbjct: 54 QAPQAESSSSGVTVGRSIFNLIKNVVGAGILAIPGGVTAFSQSRAAVVPTVAMIVALGGMSGYCFSLIGRVCAATGASSYGDAWSKTIGEKTSWLPTSSCTAKTFFACMAYSIIIGDVFADVLAAFGAPGVLAARTNILCLVSALVLLPLCLLKDLSALSYTSIMGVLGTVYTAAVMGIRYFDNSYVEGGRFFAGLAKDARPVFSGTGAMNSQALILVSMLSTAFVAHFNAPKFYAELKDKSVPRFNTVVGSSFAAAIGLVVIMTLFPYLTFGGASKSFILNNFATSDRLATSCRLAIASSIVGGYPLVFMGAKTGALAAVGISNPTENQRKVGTTLLLGFFTAIGVLLTDLGFVVSFGGAVLGSALVFIFPTMMWIA---QSKKDAKWGKPLKGWRRAEIMGNYVISALGVALAVLGGGLSIKKSF 477
BLAST of mRNA_Ecto-sp6_S_contig9.18082.1 vs. uniprot
Match: A0A836CMH1_9STRA (Transmembrane amino acid transporter protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMH1_9STRA) HSP 1 Score: 353 bits (905), Expect = 3.650e-113 Identity = 194/370 (52.43%), Postives = 265/370 (71.62%), Query Frame = 1
Query: 49 KSGMSASVFNLAKNILGAGMLSLPNGVAAFSDSRKAIVPASLIIAALGAVSAYTFVLIGRSCAETNAESYEQSWARTVGQKSAWVPAGACVATCFAGCLAFTIIIGDSFSALAKTFGAPALVAKRSNIIMAVSATVLLPLSLLKNLKSLGFTSMLGTSGLVYTAVMMAIRFFDGSYAAGGKF-HALLPAAGAPVFDAKGT-NPICFLVLVSMLSTAYEAHFNAPLFYRELKDNTVPRYSKMVSISFLASVATMTAVTAFGFLTFGGASSGYILNNYATTDRLATVARVAVASSLVFSYPLCFVGLRDGIREMRGA-KPGETRNRTRWTVGLLAGVTAASLKLTDLGFVNSFGGALIGSGIVYVFPALMFL 1149
K+ + S+FNL KNI+G+G+L+LP GVAAFS +R A+VPAS++I LG +S Y F LIGR+CA TNA SY +WA TV K+ W+P + VA F CL+++IIIGD+F+ALA+TF APA +A R I+ A+S LLPL L+ +L L +TS++G +G +YTA +MA+R+FDGSYA GG+F +A AA P+F NP+ L+LVSMLST++ AH+NAP FY ELKD TVP+Y+ +V SF AS+ +T F FLTFGG SSG ILNNYA D LAT+ R+A+ +S+VF YPL F+ R+G+ G KP +T+ R TV +L+ +T ++ L +LGFV +FGGAL+GS I+YVFPA+M++
Sbjct: 26 KAEVGGSIFNLVKNIVGSGILALPGGVAAFSHARGAVVPASVLILLLGLLSGYCFSLIGRACAATNARSYGDAWAATVEPKTVWMPLSSVVAKTFFTCLSYSIIIGDTFAALAQTFAAPAWLAYRPTILSAISGVFLLPLCLMTDLSPLRYTSIVGIAGTLYTAGVMALRYFDGSYALGGRFFNAAASAAKGPLFTGSAALNPLS-LILVSMLSTSFIAHYNAPKFYHELKDKTVPKYNTVVGTSFGASILLFVVMTVFPFLTFGGHSSGLILNNYANGDNLATMCRLAIGASIVFGYPLTFITTREGVFSALGVTKPTKTQIRVA-TVAILSALTGCAMVLRNLGFVVAFGGALLGSAIIYVFPAVMWV 393
BLAST of mRNA_Ecto-sp6_S_contig9.18082.1 vs. uniprot
Match: A0A4D9CTY7_9STRA (Aa_trans domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CTY7_9STRA) HSP 1 Score: 345 bits (884), Expect = 1.030e-108 Identity = 198/427 (46.37%), Postives = 283/427 (66.28%), Query Frame = 1
Query: 34 SEEGDK-SGMSASVFNLAKNILGAGMLSLPNGVAAFSDSRKAIVPASLIIAALGAVSAYTFVLIGRSCAETNAESYEQSWARTVGQKSAWVPAGACVATCFAGCLAFTIIIGDSFSAL-AKTFGAPALVAKRSNIIMAVSATVLLPLSLLKNLKSLGFTSMLGTSGLVYTAVMMAIRFFDGSYAAGGKFHALLPAAGAPVFDAKGTNPIC---FLVLVSMLSTAYEAHFNAPLFYRELKDNTVPRYSKMVSISFLASVATMTAVTAFGFLTFGGASSGYILNNYATTDRLATVARVAVASSLVFSYPLCFVGLRDGIREMRGAKPGETRNRTRWTVGLLAGVTAASLKLTDLGFVNSFGGALIGSGIVYVFPALMFLKPLMRKFKDKAVAAAAAAGQKREMSLNAGIVAVGVAMGVLGCVISVLETF 1299
S +G+K S +S + FNL KNILGAG+LSLP+GV AFS + A+VPA + +G++SAY F LI R CA E+Y ++W ++VG+K+AW+ AC F C AF+III DSFS+L T G PAL+A+R+N+I+ +++ VLLPL +LK+ L S+LG G V+T ++A+R DGSYA GG+FH + A+ P + ++P+ VLVSMLST++ AH+NAP FY EL++ ++P+ +K+V SF A + G+LTFGGAS G ILNNYA D LA + R+A+ +S+VF YPL FVG+RDG+ + G K R +T T+ LLA V+ ++ L D+GFV S GGAL+GS I+Y+FPA++F+K + +K V A KRE+ LN GI A+GV + ++G +SVL+ F
Sbjct: 87 SGDGNKGSSVSTATFNLIKNILGAGVLSLPSGVGAFSSNPMALVPAVALTMGMGSLSAYCFTLIARVCALNKVETYGEAWEKSVGKKTAWMVPAACTFKTFCACTAFSIIIADSFSSLFGATPGFPALLAQRTNVIVWMTSLVLLPLCMLKSFAPLAPFSLLGILGTVFTGAVIALRLLDGSYAPGGQFHEAIAASLRPSLLSGSSSPLLSPMVFVLVSMLSTSFIAHYNAPKFYTELENRSIPKLNKVVKNSFNFCTAAFAFIMGCGYLTFGGASQGLILNNYAEQDVLAKMCRLAIGASIVFGYPLTFVGIRDGVLSLLGRKAPSARTQTVTTLVLLAVVSTLAVFLRDVGFVVSLGGALLGSCIIYIFPAIIFIKTMAQKVAKGEVVETPAV--KREVLLNKGITALGVLLAIIGATVSVLKAF 511
BLAST of mRNA_Ecto-sp6_S_contig9.18082.1 vs. uniprot
Match: A0A7S2VHC0_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2VHC0_9STRA) HSP 1 Score: 330 bits (846), Expect = 1.540e-104 Identity = 186/404 (46.04%), Postives = 264/404 (65.35%), Query Frame = 1
Query: 79 LAKNILGAGMLSLPNGVAAFSDSRKAIVPASLIIAALGAVSAYTFVLIGRSCAETNAESYEQSWARTVGQKSAWVPAGACVATCFAGCLAFTIIIGDSFSALAKTFGAPALVAKRSNIIMAVSATVLLPLSLLKNLKSLGFTSMLGTSGLVYTAVMMAIRFFDGSYAAGGKFHALLPAAGAPVFDAKGTNPICF---LVLVSMLSTAYEAHFNAPLFYRELKDNTVPRYSKMVSISFLASVATMTAVTAFGFLTFGGASSGYILNNYATTDRLATVARVAVASSLVFSYPLCFVGLRDGIREMRGAKPGETRNRTRW---TVGLLAGVTAASLKLTDLGFVNSFGGALIGSGIVYVFPALMFLKPLMRKFKDKAVAAAAAAGQKREMSLNAGIVAVGVAMGVLG 1272
+ K I+G G+LSLP G+AAF D+ A +PA+++IA++G+++AY F L+GR CA T A SY+ +W TVG +AW+P +CV F LA+++++GD+FSAL +TFG R ++ ++ TVL+PL LK+L SL S++G +G++YTA+ MA+RFFDGSYA GGK A + + P KG + + +L+ MLSTAY AHFNAP FY EL++NT+ R++ V+ SF S+ + A GF TFGGAS+G ILNNY+T D L +RVAVA +LVF+YPL FVG RDG EM P E R + T +LA VTA ++K+TDL F+ SFGGA +G+ ++YV+PA+MF + ++ D A AA QK E+ L A+G+ MG +G
Sbjct: 1 MVKAIVGVGVLSLPAGIAAFGDAPSASIPAAILIASIGSIAAYNFSLLGRLCAMTGATSYKSAWEETVGASTAWIPGSSCVIKTFFAVLAYSMVLGDTFSALFETFGFNV---SREKALIGLTVTVLMPLCKLKDLSSLAPFSLVGIAGMLYTALAMAVRFFDGSYAEGGKLAADVAESLRPALGTKGASAVFSSNAFILICMLSTAYMAHFNAPKFYLELENNTIARWNTCVATSFSISILFFIGIAAMGFSTFGGASNGLILNNYSTKDSLMGFSRVAVAFALVFTYPLAFVGCRDGTLEMMQV-PKEERTDAKLNNLTYIILASVTAVAMKITDLSFIMSFGGATLGNALIYVYPAIMF-RSAVKNLGDDATAA-----QKLEVKLAMAFAALGIGMGAIG 394
BLAST of mRNA_Ecto-sp6_S_contig9.18082.1 vs. uniprot
Match: B8C604_THAPS (Aa_trans domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C604_THAPS) HSP 1 Score: 330 bits (846), Expect = 1.840e-103 Identity = 195/412 (47.33%), Postives = 264/412 (64.08%), Query Frame = 1
Query: 58 MSASVFNLAKNILGAGMLSLPNGVAAFSDSRKAIVPASLIIAALGAVSAYTFVLIGRSCAETNAESYEQSWARTVGQKSAWVPAGACVATCFAGCLAFTIIIGDSFSALAKTFGAPALVAKRSNIIMAVSATVLLPLSLLKNLKSLGFTSMLGTSGLVYTAVMMAIRFFDGSYAAGGKFHALLPAAGA-PVFDAKGTNPICF---LVLVSMLSTAYEAHFNAPLFYRELKDNTVPRYSKMVSISFLASVATMTAVTAFGFLTFGGASSGYILNNYATTDRLATVARVAVASSLVFSYPLCFVGLRDGIREMRGAKPGETRNRTRW---TVGLLAGVTAASLKLTDLGFVNSFGGALIGSGIVYVFPALMFLKPLMRKFKDKAVAAAAAAGQKREMSLNAGIVAVGVAMGVLG 1272
MS +FN+ K ++G G+LSLP G+AAF D+ A +PAS++IA +GA++AY F LIGR CA T A SY +W ++VG +AW+PA +CV F LA+++++GD+FSAL T G + R ++ ++ VLLPL LLKNL SL S+ G +G++YTAV MAIR+FDGSY+ AL A P KG + + +L+ MLSTAY AHFNAP FY ELKDNT+ R++ +V+ SF +A + A GF TFGGAS+G ILNNY+T D L +RVAVA SLVF+YPL FVG RDGI EM P E R + T +L VTA +LK+TDL F+ SFGGA +G+ ++YV+PA+MF + ++ D A A QK E+ L A+G+ MG +G
Sbjct: 72 MSNEMFNMVKAVVGVGVLSLPAGIAAFGDAPSAAIPASILIATIGAIAAYNFSLIGRLCAITGATSYRGAWEKSVGPSTAWIPAVSCVVKTFFAILAYSMVLGDTFSALFTTIG---MNVSRQTSLIGLTLVVLLPLCLLKNLSSLAPFSLAGIAGMLYTAVAMAIRYFDGSYSDPTSGFALDVAESLRPAIGTKGASAVFSSNAFILICMLSTAYMAHFNAPKFYLELKDNTIARWNTVVATSFSLGIAFFIGIAAMGFATFGGASNGLILNNYSTKDTLMGFSRVAVAFSLVFTYPLAFVGCRDGILEMLQV-PKEERTDAKLNNLTYAILGFVTAVALKITDLSFIMSFGGATLGNALIYVYPAIMF-RSAVKNMGDDATTA-----QKLEVYLATTFAALGIGMGSVG 473
BLAST of mRNA_Ecto-sp6_S_contig9.18082.1 vs. uniprot
Match: A0A7S2JRD2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JRD2_9STRA) HSP 1 Score: 330 bits (846), Expect = 2.720e-103 Identity = 195/409 (47.68%), Postives = 266/409 (65.04%), Query Frame = 1
Query: 70 VFNLAKNILGAGMLSLPNGVAAFSDSRKAIVPASLIIAALGAVSAYTFVLIGRSCAETNAESYEQSWARTVGQKSAWVPAGACVATCFAGCLAFTIIIGDSFSALAKTFGAPALVAKRSNIIMAVSATVLLPLSLLKNLKSLGFTSMLGTSGLVYTAVMMAIRFFDGSY-AAGGKFHALLPAAGAPVFDAKGT----NPICFLVLVSMLSTAYEAHFNAPLFYRELKDNTVPRYSKMVSISFLASVATMTAVTAFGFLTFGGASSGYILNNYATTDRLATVARVAVASSLVFSYPLCFVGLRDGIREMRGAKPGETRNRTRW---TVGLLAGVTAASLKLTDLGFVNSFGGALIGSGIVYVFPALMFLKPLMRKFKDKAVAAAAAAGQKREMSLNAGIVAVGVAMGVLG 1272
+FNL KNI+GAG+LSLP G+A+F ++ AI+PA+ +IA +GA S Y F IGR CA NA SY +W++TVG+ ++W+PA C + LA+++I+ D+F AL T G R +++ + +VLLPL LLKNL SL S+LG G+ YT + MAIR+F G+Y AAGGKF A + A P F + G +P F +L+SMLSTAY AHFNAP FY ELK+NT+ RY+K+VS SFL S+ T + + GFLTFG ++G ILNNY+ D L +RVAVA S+VFSYPL FVG RDG+ ++ P E R + TV LL+ VT + K+ DL F+ SF GA +G+ ++YVFPA+MF + ++K DKA AA QK E + GI +G+ MG +G
Sbjct: 93 IFNLVKNIVGAGVLSLPAGIASFGNAPSAIIPATALIAVIGAASGYCFSAIGRVCAMENATSYRDAWSKTVGESTSWIPAAICTFKTSSANLAYSMILADTFKALLSTVGVNL---SRDVVLVGTTVSVLLPLCLLKNLASLAPFSLLGIVGMAYTTLAMAIRYFGGAYSAAGGKFVADVAPALQPSFGSTGAAGVLDPKAF-ILISMLSTAYMAHFNAPKFYLELKNNTIERYNKVVSTSFLLSILTFAGIASLGFLTFGANANGLILNNYSNKDTLMAFSRVAVALSIVFSYPLAFVGFRDGVIDLLQI-PSEKRTNAKLNQLTVVLLSIVTVLASKVKDLSFLLSFAGATLGNALIYVFPAMMF-RAAVKKLGDKATAA-----QKAEATGIMGIAGMGIGMGFVG 490
BLAST of mRNA_Ecto-sp6_S_contig9.18082.1 vs. uniprot
Match: A0A1E7FDI6_9STRA (Aa_trans-domain-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FDI6_9STRA) HSP 1 Score: 325 bits (833), Expect = 1.690e-102 Identity = 181/404 (44.80%), Postives = 259/404 (64.11%), Query Frame = 1
Query: 70 VFNLAKNILGAGMLSLPNGVAAFSDSRKAIVPASLIIAALGAVSAYTFVLIGRSCAETNAESYEQSWARTVGQKSAWVPAGACVATCFAGCLAFTIIIGDSFSALAKTFGAPALVAKRSNIIMAVSATVLLPLSLLKNLKSLGFTSMLGTSGLVYTAVMMAIRFFDGSYAAGGKFHALLPAAGAPVFDAKGTNPI---CFLVLVSMLSTAYEAHFNAPLFYRELKDNTVPRYSKMVSISFLASVATMTAVTAFGFLTFGGASSGYILNNYATTDRLATVARVAVASSLVFSYPLCFVGLRDGIREMRGAKPGETRNRTRWTVGLLAGVTAASLKLTDLGFVNSFGGALIGSGIVYVFPALMFLKPLMRKFKDKAVAAAAAAGQKREMSLNAGIVAVGVAMGVLG 1272
+FNL K I+GAG+LSLP G+AAF+ ++PA +IA +G +SAY F LIGR CA TN +SY +W+ TV +KS+W+PA A CLA+++I+GD+F +L T G + + + + + +++ VLLPL L+KNL SL S++G+ G++YTAV M +R+F +Y A G F + + P F G + +LVSMLSTAY AHFNAP FY LKD T+P+Y K+VS SF S++ + + GFLTFG +SSG ILNNY+T D + ++R+AVA SLVFSYPL FVG RDG+ ++ K G + + TV LL+G+T +L + D+ FV + GA +G+G++YVFP LMF + +K A G+KRE+ L G +G+ MG+LG
Sbjct: 9 IFNLVKGIVGAGVLSLPAGIAAFASGPTGVIPAVSLIAIIGGLSAYGFALIGRCCAYTNTKSYRDAWSATVSEKSSWLPATAVTVKTICACLAYSMILGDTFVSLLSTVG---MASSKVPVTIGLTSIVLLPLCLMKNLSSLAPFSLVGSLGMLYTAVAMCVRYFGKAYTATGGFGNDMAPSLRPKFGPVGAAGVFTPSAAILVSMLSTAYMAHFNAPKFYNGLKDKTLPKYYKVVSTSFAISISIFALIASIGFLTFGSSSSGLILNNYSTRDGIMNLSRIAVAVSLVFSYPLAFVGARDGVLDLLKMK-GTAKTQNVLTVALLSGITGLALVIPDVSFVMALAGATLGNGLIYVFPFLMFRGAIKKKVD-------ATKGEKREVKLAMGSAILGILMGILG 401
BLAST of mRNA_Ecto-sp6_S_contig9.18082.1 vs. uniprot
Match: A0A1Z5JSY6_FISSO (Aa_trans domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JSY6_FISSO) HSP 1 Score: 328 bits (840), Expect = 3.520e-102 Identity = 181/405 (44.69%), Postives = 263/405 (64.94%), Query Frame = 1
Query: 70 VFNLAKNILGAGMLSLPNGVAAFSDSRKAIVPASLIIAALGAVSAYTFVLIGRSCAETNAESYEQSWARTVGQKSAWVPAGACVATCFAGCLAFTIIIGDSFSALAKTFGAPALVAKRSNIIMAVSATVLLPLSLLKNLKSLGFTSMLGTSGLVYTAVMMAIRFFDGSYAAGGKFHALLPAAGAPVFDAKGT--NPICFLVLVSMLSTAYEAHFNAPLFYRELKDNTVPRYSKMVSISFLASVATMTAVTAFGFLTFGGASSGYILNNYATTDRLATVARVAVASSLVFSYPLCFVGLRDGIREMRGAKPGETRNRTRWTVGLLAGVTAASLKLTDLGFVNSFGGALIGSGIVYVFPALMFLKPLMRKFKDKAVAAAAAAGQKREMSLNAGIVAVGVAMGVLGCV 1278
+FNL K I+GAG+LSLP G+A + ++ A+ PA +IAA+G++SAY F LIGRSCA T +++ Q+W+ V +KS+W+PA + LA+++I+GD+F++L T G +S ++ V++T+LLPL LLKNL +L S+LG+ G+VYTA+ MAIR+F +YA GGKF LP + P F + + NP +L+ MLSTAY AHFNAP FY ELKDNT+PRY K+V+ SF S+ ++ GFLTFGG S+G ILNNY++ D L +++R AVA SLVFSYPL F G RDG+ ++ + TVGLL+G+T ++ + D+ FV +F GA +G+ ++Y++PA+MF + + K + QKRE G +GVAMG +G +
Sbjct: 112 IFNLVKGIVGAGVLSLPAGIAKYGNAPGAVTPAVFLIAAIGSLSAYGFALIGRSCALTGTKTFRQAWSAAVSEKSSWIPAWSVTLKTMFAVLAYSMILGDTFASLFATAG---FAVSKSTALIGVTSTLLLPLCLLKNLNALAPFSLLGSLGMVYTAIAMAIRYFGKAYAVGGKFAKDLPVSLQPAFGTQSSVFNPAS-TILLGMLSTAYMAHFNAPKFYTELKDNTIPRYVKVVATSFAISIGLFASMAGIGFLTFGGNSAGLILNNYSSRDGLMSISRFAVALSLVFSYPLAFTGARDGVLDLLKVNNASNKFLNLLTVGLLSGITGLAIIIPDVSFVMAFAGATLGNALIYIYPAIMF-RGAVNKLSNPTKM------QKRETKFAMGSAFLGVAMGTVGAI 505 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18082.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig9.18082.1 >prot_Ecto-sp6_S_contig9.18082.1 ID=prot_Ecto-sp6_S_contig9.18082.1|Name=mRNA_Ecto-sp6_S_contig9.18082.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=440bp MSGGGEGSQAASEEGDKSGMSASVFNLAKNILGAGMLSLPNGVAAFSDSRback to top mRNA from alignment at Ecto-sp6_S_contig9:866222..871418- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig9.18082.1 ID=mRNA_Ecto-sp6_S_contig9.18082.1|Name=mRNA_Ecto-sp6_S_contig9.18082.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=5197bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:866222..871418- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig9:866222..871418- >mRNA_Ecto-sp6_S_contig9.18082.1 ID=mRNA_Ecto-sp6_S_contig9.18082.1|Name=mRNA_Ecto-sp6_S_contig9.18082.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1320bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:866222..871418- (Ectocarpus species6 EcLAC_371)back to top |