mRNA_Ecto-sp6_S_contig9.18069.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig9.18069.1 vs. uniprot
Match: D8LM17_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM17_ECTSI) HSP 1 Score: 234 bits (596), Expect = 1.770e-65 Identity = 129/136 (94.85%), Postives = 129/136 (94.85%), Query Frame = 1
Query: 670 GVPAGSRCSGNGPTAAAGVXXXXXXXXXXXXXLPEEDVPLVEVKATEAGDSIYSLRGSAPTRRGKWSRLEEEYAKRVVRDFEEGVLDAPAGAGLRKLLASKLGCDLMRVSKKFSGWACVGRRGFQPVRHPDGRASR 1077
GVPAGSRCSGNGPTAAAGV XXXXXXXXX L EEDVPLVEVKATE GDSIYSLR SAPTRRGKWSRLEEEYAKRVVRDFEEGVLDAPAGAGLRKLLASKLGCDLMRVSKKFSGWACVGRRGFQPVRHPDGRASR
Sbjct: 61 GVPAGSRCSGNGPTAAAGVAGXXXXXXXXX--LSEEDVPLVEVKATEGGDSIYSLRESAPTRRGKWSRLEEEYAKRVVRDFEEGVLDAPAGAGLRKLLASKLGCDLMRVSKKFSGWACVGRRGFQPVRHPDGRASR 194
BLAST of mRNA_Ecto-sp6_S_contig9.18069.1 vs. uniprot
Match: A0A6H5KX67_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX67_9PHAE) HSP 1 Score: 194 bits (492), Expect = 2.160e-51 Identity = 98/106 (92.45%), Postives = 100/106 (94.34%), Query Frame = 1
Query: 898 VVRDFEEGVLDAPAGAGLRKLLASKLGCDLMRVSKKFSGWACVGRRGFQPVRHPDGRASRAKESMFKMEQRWLKSLASKSSKPTGNVAINDGSSGIAAISVSSTLP 1215
V+RDFEEGVLDAPAGAGLRKLLASKLGCDLMRVSKKFSGWACVGRRGFQPVRH D RA RAKESMFKMEQ WLK LASKSSKP GNVAINDGSSGIAA+SVSSTLP
Sbjct: 4 VIRDFEEGVLDAPAGAGLRKLLASKLGCDLMRVSKKFSGWACVGRRGFQPVRHNDARALRAKESMFKMEQSWLKFLASKSSKPNGNVAINDGSSGIAAVSVSSTLP 109
BLAST of mRNA_Ecto-sp6_S_contig9.18069.1 vs. uniprot
Match: A0A6H5KQ47_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ47_9PHAE) HSP 1 Score: 158 bits (400), Expect = 8.270e-44 Identity = 80/103 (77.67%), Postives = 84/103 (81.55%), Query Frame = 3
Query: 93 IPTPPPHRGHHHPQRYSLFVAGSFLRCPPPSRIGRIQTMSSGLTAATAATAFFIDDASVRTTAGSSWRQGGGVGPCRRCGSSSNCGRRPRRNPQQRPLDSIRG 401
+ TPP H GHH PQ YSL VAGSFLR PPPSRIGR Q++SSGLT ATA FI DASVRTTAGSSWRQGGGVGPCR C SS NCGRRPRRN QQRPLDS+ G
Sbjct: 1 MQTPPKHSGHHLPQSYSLLVAGSFLRGPPPSRIGRTQSVSSGLTTATAFFIVFIVDASVRTTAGSSWRQGGGVGPCRPCDSSRNCGRRPRRNSQQRPLDSVTG 103
BLAST of mRNA_Ecto-sp6_S_contig9.18069.1 vs. uniprot
Match: A0A1Z5JKA6_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JKA6_FISSO) HSP 1 Score: 94.4 bits (233), Expect = 2.020e-17 Identity = 51/120 (42.50%), Postives = 74/120 (61.67%), Query Frame = 1
Query: 781 VPLVEVKATEAGDSIYSLRGSAPTRRGKWSRLEEEYAKRVVRDFEEGVLDAPAGAGLRKLLASKLGCDLMRVSKKFSGWACVGRRGFQP-VRHPDGRAS--RAKESMFKMEQRWLKSLAS 1131
+ + + T+A + S R RRGKW+ EE Y RV++DF G LDAPAG LR L+ KL CD MR++KKF+G AC+G+R F P VR P+ ++ +A+ + +E+RW + L S
Sbjct: 135 IVVTSISDTDASKLLGSERNGR-LRRGKWTAEEEAYVARVIQDFNSGFLDAPAGTTLRTYLSEKLQCDPMRITKKFTGDACIGKRVFHPAVRSPNNVSTIDKAQAELLHLEKRWHRRLES 253
BLAST of mRNA_Ecto-sp6_S_contig9.18069.1 vs. uniprot
Match: B7FR00_PHATC (Predicted protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FR00_PHATC) HSP 1 Score: 95.1 bits (235), Expect = 2.110e-17 Identity = 51/117 (43.59%), Postives = 69/117 (58.97%), Query Frame = 1
Query: 784 PLVEVKATEAGDSIYSLRGSAPTRRGKWSRLEEEYAKRVVRDFEEGVLDAPAGAGLRKLLASKLGCDLMRVSKKFSGWACVGRRGFQP-VRHPDGRAS--RAKESMFKMEQRWLKSL 1125
PL T + S+ G RRGKW+ EE Y RV++DF G LDAPAG LR L+ KL CD MR++KKF+G AC+G+R F P VR P + +A+ + +E+RW + L
Sbjct: 207 PLTSTSPTSSNTSVRKTSG---LRRGKWTVEEEAYVARVIQDFNSGFLDAPAGTTLRTFLSEKLQCDPMRITKKFTGDACIGKRVFHPAVRSPSNGTAIDKAQAELHGLERRWQRRL 320
BLAST of mRNA_Ecto-sp6_S_contig9.18069.1 vs. uniprot
Match: A0A7S2A0M8_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A0M8_TRICV) HSP 1 Score: 87.8 bits (216), Expect = 4.680e-17 Identity = 47/117 (40.17%), Postives = 69/117 (58.97%), Query Frame = 1
Query: 784 PLVEVKATEAGDSIYSLRGSAPTRRGKWSRLEEEYAKRVVRDFEEGVLDAPAGAGLRKLLASKLGCDLMRVSKKFSGWACVGRRGFQP-VRHPDGRAS--RAKESMFKMEQRWLKSL 1125
P + G + + P RRGKW+ EE Y RV+++F G L+APAGA LR L+ +L CD MR++KKF+G AC+G+R F P VR A+ +A+ + +E+RW + L
Sbjct: 7 PFLGAPGGAPGPATSTATTRPPLRRGKWTVEEEAYVARVIQEFNSGYLNAPAGATLRTYLSERLHCDPMRITKKFTGDACIGKRVFHPAVRCATNAAAIDKARAELDALERRWRRRL 123
BLAST of mRNA_Ecto-sp6_S_contig9.18069.1 vs. uniprot
Match: A0A6U5EM58_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5EM58_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 2.060e-16 Identity = 41/79 (51.90%), Postives = 51/79 (64.56%), Query Frame = 1
Query: 814 GDSIYSLRGSAPTRRGKWSRLEEEYAKRVVRDFEEGVLDAPAGAGLRKLLASKLGCDLMRVSKKFSGWACVGRRGFQPV 1050
G ++ P RRGKW+ EE Y RV+RDF G L APAG LR L+ KL CD MR++KKF+G AC+G+R F PV
Sbjct: 125 GSNVSHPGNKIPLRRGKWTSEEEAYVARVIRDFNAGYLAAPAGTTLRSYLSDKLHCDPMRITKKFTGDACIGKRVFHPV 203
BLAST of mRNA_Ecto-sp6_S_contig9.18069.1 vs. uniprot
Match: A0A6U5EM74_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5EM74_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 3.790e-16 Identity = 47/107 (43.93%), Postives = 62/107 (57.94%), Query Frame = 1
Query: 814 GDSIYSLRGSAPTRRGKWSRLEEEYAKRVVRDFEEGVLDAPAGAGLRKLLASKLGCDLMRVSKKFSGWACVGRRGFQPVRHPDGRA---SRAKESMFKMEQRWLKSL 1125
G ++ P RRGKW+ EE Y RV+RDF G L APAG LR L+ KL CD MR++KKF+G AC+G+R F PV RA+ + +E+RW + L
Sbjct: 125 GSNVSHPGNKIPLRRGKWTSEEEAYVARVIRDFNAGYLAAPAGTTLRSYLSDKLHCDPMRITKKFTGDACIGKRVFHPVERDATTGPVIDRAQADIRLLEERWRQRL 231
BLAST of mRNA_Ecto-sp6_S_contig9.18069.1 vs. uniprot
Match: A0A7S2R8R9_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R8R9_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 4.430e-16 Identity = 43/94 (45.74%), Postives = 64/94 (68.09%), Query Frame = 1
Query: 853 RRGKWSRLEEEYAKRVVRDFEEGVLDAPAGAGLRKLLASKLGCDLMRVSKKFSGWACVGRRGFQPV-RHP--DGRASRAKESMFKMEQRWLKSL 1125
RRGKW+ EE Y ++++ DF G L AG LR L++KL CD MR++KKF+G +C+G+R F P+ R+P D + S A+E++ ++E RWL L
Sbjct: 166 RRGKWTPEEERYVQQIINDFNNGTLAVSAGTTLRSYLSAKLNCDPMRITKKFTGDSCIGKRVFHPLERNPLNDAQVSEARETLKRLEARWLAKL 259
BLAST of mRNA_Ecto-sp6_S_contig9.18069.1 vs. uniprot
Match: A0A7S1D940_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D940_CYCTE) HSP 1 Score: 89.4 bits (220), Expect = 7.860e-16 Identity = 46/94 (48.94%), Postives = 63/94 (67.02%), Query Frame = 1
Query: 853 RRGKWSRLEEEYAKRVVRDFEEGVLDAPAGAGLRKLLASKLGCDLMRVSKKFSGWACVGRRGFQP-VRHPDGRAS--RAKESMFKMEQRWLKSL 1125
RRGKW+ EE Y RV++DF G L+APAG LR L+ KL CD MR++KKF+G AC+G+R F P VR P A+ +A+ + +E+RW + L
Sbjct: 78 RRGKWTVEEEAYVARVIQDFNSGYLNAPAGTTLRSYLSEKLHCDPMRITKKFTGDACIGKRVFHPAVRCPSNTAAIDKAQGELDALERRWRRRL 171 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18069.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig9.18069.1 >prot_Ecto-sp6_S_contig9.18069.1 ID=prot_Ecto-sp6_S_contig9.18069.1|Name=mRNA_Ecto-sp6_S_contig9.18069.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=448bp MDNKETERQPAGSKRLRSASSEEEGLVGRELFQHHHHTAATTTRSVIHSSback to top mRNA from alignment at Ecto-sp6_S_contig9:743823..748186+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig9.18069.1 ID=mRNA_Ecto-sp6_S_contig9.18069.1|Name=mRNA_Ecto-sp6_S_contig9.18069.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=4364bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:743823..748186+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig9:743823..748186+ >mRNA_Ecto-sp6_S_contig9.18069.1 ID=mRNA_Ecto-sp6_S_contig9.18069.1|Name=mRNA_Ecto-sp6_S_contig9.18069.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1344bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:743823..748186+ (Ectocarpus species6 EcLAC_371)back to top |