mRNA_Ecto-sp6_S_contig9.18057.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig9.18057.1
Unique NamemRNA_Ecto-sp6_S_contig9.18057.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
BLAST of mRNA_Ecto-sp6_S_contig9.18057.1 vs. uniprot
Match: A0A6H5KTE5_9PHAE (G-patch domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KTE5_9PHAE)

HSP 1 Score: 589 bits (1518), Expect = 1.210e-210
Identity = 319/342 (93.27%), Postives = 326/342 (95.32%), Query Frame = 2
Query:   77 MASRFKRQRAKALNPASAGGAATSTPAFGDEDDYLSASFVVEEPNKPRGKRAQQEADPERGRGKSLLSKKDIAKKMEDRREEGLQQKIGEENAGFKLLMKLGYKGGGLGKDGEGTTKPLMPELKQGRAGLGKESESKRRKEEQKERAKRKASRDAEQEVQRREHFRMSKAAQFVDRRLQQDLSRARRLVESLDETSGRTRSIMWPDEEQESLDEDPNGGGGCGGSYFNDQGLRSGIDTDAAGTTAGPLQAWDGTDSRGETLSTEPKEAKGEASTSEEGMGEDGGLREEWDVMTADEKLSACLAYLRASYSYCMYCACRYEGLRDLQDSCPGPSRSDHDDEEM 1102
            MASRFKRQRAKALNPASA GAATSTPAFGDEDDYLSASFVVEEPNKPRGKRAQQEADPERGRG+S++SKKDIAKKMEDRREEGLQQKIGEENAGFKLLMKLGYKGGGLGKDGEGTTKPLMPELKQGRAGLGKESESKRRKEEQKERAKRKASRD +QEVQRREHFRMSKAAQFVDRRLQQDLSRARRLVESLDETSGRTRSIMWPDEE+ESLDEDPNGGGG   SY ND+G R GIDTDAA TTAGP QAW GT S G+TLS EPKEAKGEASTSEEGMGEDGGLREEWDVMTADEKLSACLAYLRASYSYCMYCACRYEG RDLQ SCPGPSRSDHDDEEM
Sbjct:    1 MASRFKRQRAKALNPASAIGAATSTPAFGDEDDYLSASFVVEEPNKPRGKRAQQEADPERGRGESVMSKKDIAKKMEDRREEGLQQKIGEENAGFKLLMKLGYKGGGLGKDGEGTTKPLMPELKQGRAGLGKESESKRRKEEQKERAKRKASRDTQQEVQRREHFRMSKAAQFVDRRLQQDLSRARRLVESLDETSGRTRSIMWPDEEKESLDEDPNGGGG---SYLNDEGRRGGIDTDAADTTAGPSQAWGGTGSTGDTLSKEPKEAKGEASTSEEGMGEDGGLREEWDVMTADEKLSACLAYLRASYSYCMYCACRYEGPRDLQGSCPGPSRSDHDDEEM 339          
BLAST of mRNA_Ecto-sp6_S_contig9.18057.1 vs. uniprot
Match: A0A7S2Y0F0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0F0_9STRA)

HSP 1 Score: 110 bits (275), Expect = 5.480e-24
Identity = 92/316 (29.11%), Postives = 155/316 (49.05%), Query Frame = 2
Query:  164 DEDDYLSASFVVE---EPNKPRGKRAQQEADPERGRGKSLLSKKD---IAKKMEDRREEGLQQKIGEENAGFKLLMKLGYKGG-GLGKDGEGTTKPLMPELKQGRAGLGKESESKRRKEEQKERAKRKASRDAEQEVQRREHFRMSKAAQFVDRRLQQDLSRARRLVESLDETSGRTRSIMWPDEEQESLDEDPNGGGGCGGSYFNDQGLRSGIDTDAAGTTAGPLQAWDGTDSRGETLSTEPKEAKGEASTSEEGMGEDGGLREE-WDVMTADEKLSACLAYLRASYSYCMYCACRYEGLRDLQDSCPGPSRSDH 1087
            +E+DY+S  F+           GKR  +     R R       +    + ++M    ++G+ Q+I E+N GF+LL K GY+ G GLG++  G   P+  ++KQGRAGLGK+++ K  +E++KE  +       E +  R+  FR   +A+++++R+  DL++AR   ++LD  +G+     W D         P+G  G GG+  ++    S +D         P          G +   E   A G +S S      DG LR++ +++    EKL++ L YLR  + +C+YC C +    D+  +CPG    DH
Sbjct:   23 EEEDYMSDKFLASLEAAAGSSSGKRGNKRKRQLRARPPXXXXXQQQLPLRQRMAQTLQQGMDQQIQEDNPGFRLLKKFGYQEGTGLGRNKAGIVNPIGIDIKQGRAGLGKDAQVKAEQEQRKELQRM----QREMQEMRQRDFRGEGSARYLEQRMASDLTKARHSAQTLDAQAGKAWPGFWAD---------PSGKAGDGGAGASEDLAGSALDEHVQEPIYRPASP------AGTSEGEEDAPAAGTSSASRGAALGDGALRKQMFEMQPTAEKLNSLLQYLRNEHHFCLYCGCSFSSAADIAKNCPGQMYDDH 319          
BLAST of mRNA_Ecto-sp6_S_contig9.18057.1 vs. uniprot
Match: A0A2P2I8Y9_9CRUS (G patch domain-containing protein 11 n=2 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A2P2I8Y9_9CRUS)

HSP 1 Score: 92.0 bits (227), Expect = 2.870e-17
Identity = 95/288 (32.99%), Postives = 131/288 (45.49%), Query Frame = 2
Query:  266 KSLLSKKDIAKKMEDRREEGLQQKIGEENAGFKLLMKLGYKGG-GLGKDGEGTTKPLMPELKQGRAGLGKESESKRRKEEQKERAKRKASRDAEQEVQRREHFRMSKAAQFVDRRLQQDLSRARRLVESLDETSGRTRSIMWPDEEQESLDEDPNGGGGCGGSYFNDQGLRSGIDTDAAGTTAGPLQAWDGTDSRGETL---STEPKE-AKGEASTSEEGMG-------EDGGLREEWDVMTADEKLSACLAYLRASYSYCMYCACRYEGLRDLQDSCPGPSRSDHDD 1093
            K LL  K + +KM  R +EGL   IG EN GF +L K+GYK G  LGK+G G  +P+  ELK  R GLG + +   RK E KER      +   QE    + +R  K  Q + +++  DL + +R   SLD   G T  + W                     YF     R   + + A       Q   G DS    +   S +PK+ + G+    E+  G       +D    E W V    + +S    YLR SY+YC++C   Y+   DLQ SCPG +R DHDD
Sbjct:   74 KKLLKSKKVTQKM--RMDEGLSTAIGAENKGFAMLQKMGYKPGTSLGKEGSGRLEPIRMELKFDRGGLGLKEQLMERKRE-KERRYLANIKKKNQEFDPNK-YRELKRQQLMAKQMLSDLHQCQRTCRSLDSDEGLTEPMEW---------------------YFWPTSYRKEHEQEEASGHDEYTQEQHGGDSEECVVGSNSEKPKDGSSGDCWNEEQDDGWLNAYSWDDQEKMEPWQVEIQVDLVST---YLRTSYNYCIWCGTAYDDQTDLQRSCPGTTRQDHDD 333          
BLAST of mRNA_Ecto-sp6_S_contig9.18057.1 vs. uniprot
Match: A0A7L1NWN7_RHICY (G patch domain-containing protein 11 (Fragment) n=1 Tax=Rhinopomastus cyanomelas TaxID=113115 RepID=A0A7L1NWN7_RHICY)

HSP 1 Score: 89.0 bits (219), Expect = 1.060e-16
Identity = 90/321 (28.04%), Postives = 142/321 (44.24%), Query Frame = 2
Query:  164 DEDDYLSASFVVEE--PNKP---------RGKRAQQEADPERGRGKSLLSKKDIAKKMEDRREEGLQQKIGEENAGFKLLMKLGYKGG-GLGKDGEGTTKPLMPELKQGRAGLGKESESKRRKEEQKERAKRKASRDAEQEVQRREHFRMSKAAQFVDRRLQQDLSRARRLVESLDETSGRTRSIMWPDEEQESLDEDPNGGGGCGGSYFNDQGLRSGIDTDAAGTTAGPLQAWDGTDSRGETLSTEPKEAKGEASTSEEGMGEDGGLREEWDVMTADEKLSACLAYLRASYSYCMYCACRYEGLRDLQDSCPGPSRSDHD 1090
            ++DDY+S SF+ ++  P  P         R +  Q+EA+ E+ R KS      I ++ +++R+  L+  +G EN GF LL K+GYK G  LGK GEG  +P+   +K GR+GLG +   KR+ EE+ E  ++K  R  E   Q  + FR+    +  +R+++ DL +++R  + LD                                      ++ G+D         P + W         L+ E  + K            D         ++  EKL    AYLR  + YC++C   YE   DL  +CPG S +DHD
Sbjct:    2 EDDDYMSDSFIKQDVRPGLPMMRQVKEAIRKEEKQKEAN-EKNRQKS------IKQEEKEKRDLVLKSALGNENKGFALLQKMGYKSGQALGKSGEGIVEPIPLNIKTGRSGLGHDELKKRKAEEKLENYRQKLHRKREANEQAADQFRIRFKNKQEERKMEVDLRKSQRACQQLD--------------------------------------MQKGVDV--------PKETW-------YWLNPEEDDKKXXXXXXXXSTSSD---------LSVSEKLHILTAYLRGEHLYCIWCGTTYEDAEDLSSNCPGGSAADHD 253          
BLAST of mRNA_Ecto-sp6_S_contig9.18057.1 vs. uniprot
Match: UPI001BB1B51B (G patch domain-containing protein 11-like n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB1B51B)

HSP 1 Score: 89.0 bits (219), Expect = 1.350e-16
Identity = 71/202 (35.15%), Postives = 117/202 (57.92%), Query Frame = 2
Query:  155 AFGDEDDYLSASFVVEEPN-KPR----GKRAQ---QEADPERGRGKSLLSKKDIAKKMEDRREEGLQQKIGEENAGFKLLMKLGYK-GGGLGKDGEGTTKPLMPELKQGRAGLGKESESKRRKEEQKERAKRKASRDAEQEVQRREHFRMSKAAQFVDRRLQQDLSRARRLVESLDETSGRTR-SIMW-------PDEEQES 709
            A G+EDDY+S SF+VE  + KP+    GK A+    EA  +    K+    K +  + E++R++GL   I  ++ GF +L K+GYK G GLGK G G  +P+  E+K GR GLG+ESE KR+KEE  +  +  A + A+ EV  + +F    + +F ++ +++DL+ +++    LD+  G +   ++W       P+EE E+
Sbjct:    2 AEGEEDDYMSDSFLVESKDTKPKQLAWGKTARLNKMEAKRKEAAEKNKSKFKPVKVREEEQRQKGLNSAISTQSKGFAMLQKMGYKQGSGLGKTGSGRAEPVGIEIKTGRGGLGQESELKRKKEEMAKMREVMAHKRAKMEVHHKGNFLQKMSERFSEKEVEKDLNNSQKACAHLDQAQGYSEPEVIWYWPKRMLPEEEVEN 203          
BLAST of mRNA_Ecto-sp6_S_contig9.18057.1 vs. uniprot
Match: K7GJB4_PELSI (G patch domain-containing protein 11 n=1 Tax=Pelodiscus sinensis TaxID=13735 RepID=K7GJB4_PELSI)

HSP 1 Score: 87.0 bits (214), Expect = 5.420e-16
Identity = 88/316 (27.85%), Postives = 139/316 (43.99%), Query Frame = 2
Query:  164 DEDDYLSASFV-VEE---PNKPRGKRAQQEADPERGRGKSLLS--KKDIAKKMEDRREEGLQQKIGEENAGFKLLMKLGYKGG-GLGKDGEGTTKPLMPELKQGRAGLGKESESKRRKEEQKERAKRKASRDAEQEVQRREHFRMSKAAQFVDRRLQQDLSRARRLVESLDETSGRTRSIMWPDEEQESLDEDPNGGGGCGGSYFNDQGLRSGIDTDAAGTTAGPLQAWDGTDSRGETLSTEPKEAKGEASTSEEGMGEDGGLREEWDVMTADEKLSACLAYLRASYSYCMYCACRYEGLRDLQDSCPGPSRSDHD 1090
            +EDDY+S SF  V++   P  PR +R ++    E  + ++     +K + ++ ++RR+  L+  +G EN GF LL K+GYK G  LGK GEG  +P+   +K GR GLG E   KR+ E+Q E  +RK     + + Q  + FRM   ++  +R+++ DL +++R  + LD                                       + GI+         P + W            EP++             +D  L       +  EKL     YLR  + YC++C   YE   DL  +CPG S +DHD
Sbjct:    3 EEDDYMSESFTNVQQDVRPGLPRLRRMKEAIQKEEKQREANQKNRQKSLKEEEKERRDSVLKSALGNENKGFALLQKMGYKSGQALGKSGEGIVEPIPLNIKTGRGGLGHEELQKRKAEQQLENYRRKIHMKKQADEQAADQFRMRFKSKHEERKIEGDLRKSQRACQQLD--------------------------------------TQKGIEV--------PKEIW---------YWVEPEQEXXXXXXXXXNEYKDSDL-------SVLEKLQILTTYLREEHFYCIWCGTAYEESADLSSNCPGNSSADHD 256          
BLAST of mRNA_Ecto-sp6_S_contig9.18057.1 vs. uniprot
Match: W5NG43_LEPOC (G patch domain-containing protein 11 n=1 Tax=Lepisosteus oculatus TaxID=7918 RepID=W5NG43_LEPOC)

HSP 1 Score: 86.3 bits (212), Expect = 1.050e-15
Identity = 97/319 (30.41%), Postives = 144/319 (45.14%), Query Frame = 2
Query:  161 GDEDDYLSASFVVE----EPNKPRGKRAQQEADPER-GRGKSLLSKKDIAKKME-DRREEGLQQKIGEENAGFKLLMKLGYKGG-GLGKDGEGTTKPLMPELKQGRAGLGKESESKRRKEEQKERAKRKASRDAEQEVQRR--EHFRMSKAAQFVDRRLQQDLSRARRLVESLDETSGRTRSIMWPDEEQESLDEDPNGGGGCGGSYFNDQGLRSGIDTDAAGTTAGPLQAWDGTDSRGETLSTEPKEAKGEASTSEEGMGEDGGLREEWDVMTADEKLSACLAYLRASYSYCMYCACRYEGLRDLQDSCPGPSRSDHD 1090
            G+EDDY+S SF+ +     P  P  +R ++    E+    K+L S++   K+ E +RRE  LQ  IG EN GF LL K+GYK G GLGK+G G  +P+   +K  R G+G E   KR+ EE+ E  +RKA  + +Q+V++R  + FR+    +  +R+   DL +++R  E LD   G    I  P E+                 Y+                   P+    GT+  GE           E                    +T  EKL    +YLR  + YC++C   Y+   DL  +CPG S + HD
Sbjct:    3 GNEDDYMSDSFLNQIKDVRPGVPLPRRVKEAQRKEKLHMEKNLQSRQKSLKEQEQERREAVLQSSIGNENKGFALLQKMGYKAGQGLGKEGAGRVEPIPLNIKTDRGGIGMEEVKKRKAEEKLEHYRRKA--NFKQQVEKRTLDDFRVRLRTEREERQTDADLRKSQRACEQLDSQKG----IHAPREDW----------------YW-------------------PVS---GTEEPGEEXXXXXXXXXXEE-------------------LTPLEKLQILTSYLRGVHFYCIWCGTSYDDEEDLTANCPGDSSAAHD 258          
BLAST of mRNA_Ecto-sp6_S_contig9.18057.1 vs. uniprot
Match: UPI0014710E4E (G patch domain-containing protein 11 n=1 Tax=Thalassophryne amazonica TaxID=390379 RepID=UPI0014710E4E)

HSP 1 Score: 85.9 bits (211), Expect = 1.520e-15
Identity = 95/318 (29.87%), Postives = 142/318 (44.65%), Query Frame = 2
Query:  164 DEDDYLSASFVVE-EPNKP------RGKRAQQEADPERGRGKSLLSKKDIAKKME-DRREEGLQQKIGEENAGFKLLMKLGYKGG-GLGKDGEGTTKPLMPELKQGRAGLGKESESKRRKEEQKERAKRKASRDAEQEVQRREHFRMSKAAQFVDRRLQQDLSRARRLVESLDETSGRTRSIMWPDEEQESLDEDPNGGGGCGGSYFNDQGLRSGIDTDAAGTTAGPLQAWDGTDSRGETLSTEPKEAKGEASTSEEGMGEDGGLREEWDVMTADEKLSACLAYLRASYSYCMYCACRYEGLRDLQDSCPGPSRSDHD 1090
            +EDDY+S +F+ + +  KP      R K A +    ER + K++ +++   K+ E + RE  LQ  I  EN GF LL K+GYK G GLGK G G   P+   +K  R G+G E   KR+ EE+ E  + KA    + E +  E FR+    +  +R+++ DL R++R  E LD      + I  P EE                 Y+ + G                            T   E +E +   S  EEG  E          +++ +KL    +YLR  + YC++C   Y    DL  SCPG + +DHD
Sbjct:    4 EEDDYMSDAFLSKIQDVKPGVSMVRRVKEAMKRE--ERQKEKNIKNRQKTYKEQEKESREAALQNAISNENKGFALLQKMGYKAGQGLGKAGAGMVDPIQLNIKTDRGGIGMEEAKKRKAEEELEHYRLKARVQQQNETKSLEDFRVRVRTEREERKIEADLRRSQRACEHLD----LQKDIAVPREEW----------------YWPNAG----------------------------TDDYEAEEDEEXXSNEEEGHME----------LSSLDKLQVLTSYLRGIHFYCIWCGTAYNNEEDLCSSCPGDTATDHD 261          
BLAST of mRNA_Ecto-sp6_S_contig9.18057.1 vs. uniprot
Match: A0A0R3W315_TAEAS (G patch domain-containing protein 11 n=1 Tax=Taenia asiatica TaxID=60517 RepID=A0A0R3W315_TAEAS)

HSP 1 Score: 85.9 bits (211), Expect = 2.950e-15
Identity = 99/328 (30.18%), Postives = 152/328 (46.34%), Query Frame = 2
Query:  161 GDEDDYLSASFVVEEPNKPR-----GKRAQQEADPERGRGKSLLSKKDIAKKMEDRREEGLQQKIGEENAGFKLLMKLGYKG-GGLGKDGEGTTKPLMPELKQGRAGLGKESESKRRKEEQKERAKRKASRDAEQEVQRREHFRMSKAAQFVDRRLQQDLSRARRLVESLDETSGRTRSI---MWPDEEQESLDEDPNGGGGCGGSYFNDQGLRSGI-DTDAAGTTAGPLQAWDGTDSRGETLSTEPKEAKGEASTSEEGMGEDGGLREEWDVMTA---------DEKLSACLAYLRASYSYCMYCACRYEGLRDLQDSCPGPSRSDH 1087
            G +DDY+S  F+   P KP       K A+Q    +R +   +  K    K+ME RREEGL+ +IGE+N G++L++K+G+KG GG+GK  EG ++P+  E+  GR GLG  +  K+R E     A  +  RD E    + + FR S A++F   R Q+ L  AR + + LD        +    WP +            G       + + +R  I  +D  G      +  D  D++ +       E + E  T    +G +    E  D+  A         D  LS    YLR S+ YC +C  +Y    +L+ +CPGP+  DH
Sbjct:    6 GSDDDYMSDKFL-NPPVKPLCSGLVSKSARQRIAEQRMQASQISHK---GKQMEVRREEGLKTRIGEDNIGYRLMLKMGFKGDGGIGKKAEGRSEPIPIEIIDGRKGLGLHNIEKKRGEAV---AAARKQRDMELSTFQSD-FRASMASRFRMERAQRQLMAARSICQRLDMAQSLDHPVDKNFWPPD------------GNRAKLLAHSELIRREICRSDPCGIQKKRRRRQDDADNKRDF-----DEHRNEYDTV---LGVESDEEEYCDIDAAQHGPIESQPDLLLSRLCTYLRESHFYCFWCGEQYSSSSNLEANCPGPTEEDH 305          
BLAST of mRNA_Ecto-sp6_S_contig9.18057.1 vs. uniprot
Match: A0A068WJN8_ECHGR (G patch domain-containing protein 11 n=3 Tax=Echinococcus TaxID=6209 RepID=A0A068WJN8_ECHGR)

HSP 1 Score: 84.7 bits (208), Expect = 7.460e-15
Identity = 92/326 (28.22%), Postives = 153/326 (46.93%), Query Frame = 2
Query:  161 GDEDDYLSASFVVEEPNKPRGKRAQQEADPERGRGKSLLSK--KDIAKKMEDRREEGLQQKIGEENAGFKLLMKLGYKG-GGLGKDGEGTTKPLMPELKQGRAGLGKESESKRRKEEQKERAKRKASRDAEQEVQR---REHFRMSKAAQFVDRRLQQDLSRARRLVESLDETSGRTRSI---MWPDEEQ--------ESLDEDPNGGGGCGGSYFNDQGLRSGIDTDAAGTTAGPLQAWDGTDSRGETLSTEPKEAKGEASTSEEGMGEDGGLREEWDVMTADEKLSACLAYLRASYSYCMYCACRYEGLRDLQDSCPGPSRSDH 1087
            G ++DY+S  F+   P KP       ++  +R   + + +   K   K+M+ +REEGL+++IGE+N G+KL++K+G+KG GG+GK  EG ++P+  E+  GR GLG  +  K+R E         A+   +Q+++    +  FR S A++F   R Q+ L  AR + + LD    R + +    WP +E+        E +  +      C  S    +  R     DA  T           D R +   T       E +  +    + G +  + D++     LS    YLR S+ YC +C  +Y    +L+  CPGP+  DH
Sbjct:    6 GSDEDYMSDKFL-NPPVKPLCSGLASKSTRKRVAEQCMQTSQNKHNGKQMDIKREEGLKRRIGEDNIGYKLMLKMGFKGDGGIGKKAEGRSEPIPIEIIDGRKGLGLHNIEKKRSEAI-------AAAREQQDMKMSAFQSDFRASMASRFRMERAQRQLMAARSICQQLDMAQSRDQPVDKEFWPPDEKKAKLLAHSELIRREI-----CRSSPHGSRKKRRRRQNDAGNTRD--------LDERRDECDTVLGIESDEEAYCDIDAAQHGPIESKPDLI-----LSRLATYLRESHFYCFWCGEQYSNSSNLEAKCPGPTEEDH 305          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18057.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KTE5_9PHAE1.210e-21093.27G-patch domain-containing protein n=2 Tax=Ectocarp... [more]
A0A7S2Y0F0_9STRA5.480e-2429.11Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A2P2I8Y9_9CRUS2.870e-1732.99G patch domain-containing protein 11 n=2 Tax=Hiron... [more]
A0A7L1NWN7_RHICY1.060e-1628.04G patch domain-containing protein 11 (Fragment) n=... [more]
UPI001BB1B51B1.350e-1635.15G patch domain-containing protein 11-like n=1 Tax=... [more]
K7GJB4_PELSI5.420e-1627.85G patch domain-containing protein 11 n=1 Tax=Pelod... [more]
W5NG43_LEPOC1.050e-1530.41G patch domain-containing protein 11 n=1 Tax=Lepis... [more]
UPI0014710E4E1.520e-1529.87G patch domain-containing protein 11 n=1 Tax=Thala... [more]
A0A0R3W315_TAEAS2.950e-1530.18G patch domain-containing protein 11 n=1 Tax=Taeni... [more]
A0A068WJN8_ECHGR7.460e-1528.22G patch domain-containing protein 11 n=3 Tax=Echin... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig9contigEcto-sp6_S_contig9:637707..643493 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score578.6
Seed ortholog evalue2e-162
Seed eggNOG ortholog2880.D8LM27
Model size1105
Hectar predicted targeting categoryother localisation
GOsGO:0000775,GO:0000776,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005737,GO:0032991,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044422,GO:0044424,GO:0044427,GO:0044446,GO:0044464,GO:0098687
Exons8
EggNOG free text desc.DUF4187
EggNOG OGsKOG1994@1,KOG1994@2759
Ec32 ortholog descriptionG-patch domain
Ec32 orthologEc-14_002650.1
Cds size1029
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig9.18057.1prot_Ecto-sp6_S_contig9.18057.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig9 637783..643493 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350522.5738506-UTR-Ecto-sp6_S_contig9:637706..6377821682350522.5738506-UTR-Ecto-sp6_S_contig9:637706..637782Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig9 637707..637782 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350522.586325-CDS-Ecto-sp6_S_contig9:637782..6378101682350522.586325-CDS-Ecto-sp6_S_contig9:637782..637810Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 637783..637810 +
1682350522.596353-CDS-Ecto-sp6_S_contig9:638439..6386071682350522.596353-CDS-Ecto-sp6_S_contig9:638439..638607Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 638440..638607 +
1682350522.606364-CDS-Ecto-sp6_S_contig9:639711..6397851682350522.606364-CDS-Ecto-sp6_S_contig9:639711..639785Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 639712..639785 +
1682350522.6160069-CDS-Ecto-sp6_S_contig9:640074..6401901682350522.6160069-CDS-Ecto-sp6_S_contig9:640074..640190Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 640075..640190 +
1682350522.6261296-CDS-Ecto-sp6_S_contig9:640771..6408591682350522.6261296-CDS-Ecto-sp6_S_contig9:640771..640859Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 640772..640859 +
1682350522.6356754-CDS-Ecto-sp6_S_contig9:641643..6417681682350522.6356754-CDS-Ecto-sp6_S_contig9:641643..641768Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 641644..641768 +
1682350522.6459463-CDS-Ecto-sp6_S_contig9:642264..6425561682350522.6459463-CDS-Ecto-sp6_S_contig9:642264..642556Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 642265..642556 +
1682350522.6582959-CDS-Ecto-sp6_S_contig9:643355..6434931682350522.6582959-CDS-Ecto-sp6_S_contig9:643355..643493Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 643356..643493 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig9.18057.1

>prot_Ecto-sp6_S_contig9.18057.1 ID=prot_Ecto-sp6_S_contig9.18057.1|Name=mRNA_Ecto-sp6_S_contig9.18057.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=343bp
MASRFKRQRAKALNPASAGGAATSTPAFGDEDDYLSASFVVEEPNKPRGK
RAQQEADPERGRGKSLLSKKDIAKKMEDRREEGLQQKIGEENAGFKLLMK
LGYKGGGLGKDGEGTTKPLMPELKQGRAGLGKESESKRRKEEQKERAKRK
ASRDAEQEVQRREHFRMSKAAQFVDRRLQQDLSRARRLVESLDETSGRTR
SIMWPDEEQESLDEDPNGGGGCGGSYFNDQGLRSGIDTDAAGTTAGPLQA
WDGTDSRGETLSTEPKEAKGEASTSEEGMGEDGGLREEWDVMTADEKLSA
CLAYLRASYSYCMYCACRYEGLRDLQDSCPGPSRSDHDDEEM*
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mRNA from alignment at Ecto-sp6_S_contig9:637707..643493+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig9.18057.1 ID=mRNA_Ecto-sp6_S_contig9.18057.1|Name=mRNA_Ecto-sp6_S_contig9.18057.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=5787bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:637707..643493+ (Ectocarpus species6 EcLAC_371)
TGAGACCTGAGGCACAAGGCACAAGACTCGCGCAGATACAAACACAAAAA TCTCTTCCCCAGTCCGTACTTCACACATGGCGTCGAGATTCAAGCGTCAG CGAGGTGAGATAATTTCGTCCATCAGCTAAATGGTGCTCCAGTTCCGCGT GCGTAGTCAACGGAAGTCATGCCGCATTAGCGAATTTACCTATTTACACA GCAGGTATGTGCTGATGTACGTATGCCTAGATAGGCATCGATGTACTGCT ACGGTAATGGCGCCTGCATTCCCAGACTAATATTGTAGGGGCTGGGAAAT CTACATAGCTCTACTCGAGACCGAGAGTTCGTAGCAGTATCGGATATTAC TGGCTGTAGCTGCATCCTAACCTACTGTATAATAGCTGCTCTCACGATTG TAAAATGATAATGTCAAAGTTGTCTCGTAAACGTTGAGAGAGATTATGTA GTGGGAACCAAGGACTATGCATACAACTTGCCACTAACCAGCTGCTGTTG GGCAACAGCTAGAGCAGCAGTAGTATATAGCTGTCGTGCAAGGGGCCGGT GATTTAACGCCAACTCCCGGTATATTTTAGGGAGCGTGCAGGTGCGCGGC GCCTCTCTCTTCTCCGTGAAGTACTCGGGATTGCGGGAGGGAAGTTCTTT TACGTAAGCCGCTTCACCCCCCCCCCCTCCGCCGTCCCTGCAATACTTGG GTGTTTTTTTTTTGCTCTCCTGATATGTTACAGCCAAGGCGTTGAACCCT GCATCAGCAGGAGGAGCAGCAACGTCCACTCCGGCGTTCGGAGACGAGGA CGACTACCTGTCGGCGTCGTTTGTGGTGGAAGAACCGAACAAGCCGCGCG GCAAGCGAGCGCAGCAAGAGGCAGACCCAGAGCGGGGAAGAGGCAAGTCG CGTGGTTCGACCCGCATCGGGGGGGTGTAGCAAGCCCGGTGTGCGTGAGC TCTGCCTACTTGAACCAATAAAAAGAACCGCGTGGGCAGGTCTGAACAGC GACGAGTTGTCATGCAGGGTCATCAACCTGATTTGTCTTTGTCCCCAAGT GCTGTCAAGAACGCATCCACACCGGTAGAGGCGCGTACAACGATCCAGCT GTACGATGGAGGTACCAGGGCGTGCTGGTGGGAGACGACCCCTTGGTGGG GGGGGCACCCTGAGCCAATCCACATCAATCGAAGCGCTTTGATCGTCGCG TTTTTGCCGGGCTTGTGAGATACCCAGCAGTTAGCAATGGCAAAGCTTTT ACGAATAATAATCCGAATCGTCTTCTGTCGAGCGCTGGGAGAAGAAAAGC TACGAATGGGTTGGTAAAAAATTGTGCAGGGGGGGGTTTCGTACGTGTTC CAGAGAGTGTTGCTTCCCGAGATTCTTACAGATCCTTCTGCCTGAACAAT CCCGTGGCCCTCCCGCCGCCCTCTCCGATGAACTCTGTTCACCGGCAACG ACGATATCGCGAGTGATAAGTTACGGAGCAACGTGAGCGGGCTCTTGCAG ACGTGTGCAGCTACGTTTTCGCCCCACGCTGATGATTCGCGACACAGCTG GTGCCGCGGTTGCTGGGCAGCTGGGCGCGTCGTCAAAACTAGGGACATCG CTGGTCTAGTCGCTGATGTACTCTCTTGGGAATTGTTGCAGAGGCTGACT CTCCCCAACTCTGGTGCAGCTGAGATATGACTACCAGATGCAGGCGTCAC TCTTTATATGTATCGTTTGTTCGTGGAAGGGGGGCACCCTGTGTAGGACC CTTCTGTCGTCCTTTCCATTATTTATCGAAATATTTTGAAGTAGCGTGCT TCTTCGTAATCATGCGCATCGTTTTGGTCTCGTCTTGCGGTATCGCACGA AGTGCTACTGCTGTGAAGCATGTGTATTATAGTTTCCCGCTGGTACGGGA TTGCGAAACCTGTCCGCCGGTTTCCCATCGCGTCCTCAGCGCCCCCAACG AATATTTCACCGTCGTCACTCCGGCCTGCCATCGCCGCCGCCGCCGCCGC CGCAGTGCTGTCCAAGAAAGATATCGCCAAGAAGATGGAGGACAGGAGAG AGGAAGGGTTGCAGCAGAAGATAGGGGAGGTGCGTCACCAACTCCTGCGG GACGGAGCACACCGTGTAGTAGATGGGAGCGTCGACCTGTTCCTCTCGAA GAAAGGATTTGGGGCGAAGGGGAATTGTGCTGTGTTGTTAGCTTTTCAAG CGAGCCATTCGAAAGGCGAGAGGGTGCAAATGAGAGAAGAGAACAGCGGT GTTGTCGTCGTAGCGGCAGCAGACATGCCAACCGCCCCCCTTCTGCGGAG CATGGCGTACCCTGAGCTCACCCAAGCCCGTTCCACCAACCCTTGACTGA TGTGCCGCATAAACACAGGAGAACGCAGGCTTTAAACTTCTCATGAAGCT GGGGTACAAGGGAGGGGGGCTCGGCAAGGACGGCGAGGGCACAACGAAGC CGTTGATGCCGGAGCTGAAGCAGGGTCGGGCAGGGTGAGATTTGGGAACC GGGGTTCGGGAGACAGATGAGCCCATGAAGCCGGTCGCCCCGGTGGTCTA GTTGGTAGCCTCGTAACCTTCTAGAGGTCAGGTCAGGGGTTCGAATCCCG GCGTAGGCGAGCTTTTCTTGCAAAGTGAGTTTTTCTCTCGCTTCCGCTCC TGGCCAAGTGGATAGCGCTAGTTCGTGTGTACACAGAGGGAAGAGAGTGC TGAACTCTTCTCGCATTAAAAATTGAAGGCGAAGTACCGCAGGAGGGGAG GGTAGAGATGGGCTCTTCTGTGTGACCACGGGTTGGAATAAACGGCACTA GTGCTGTGAGCGCTGATTTGAAGTGAAGAAAAAAAAAAAAAAATGCGTGT CTGTGGAATGTCACCGTACACCTAAAACGGAAATTTCACCCTTACGAAGG CGCGGCAATGGTGGCCTCAACCGACCCAGGCAATGAGGGAAATATGTTTT TCCTTCTGCCGACGTGGGGGTAGTGGGACGGGTGTTGTCCCCAGGCTTGG TGTCACGCAAAGCCGACGCCAACGCCTGCCGGCTGCCGCTGCTTGCCGGC CTCCGTGCTGTGCAGGTTGGGCAAGGAGTCGGAGTCCAAGCGAAGAAAAG AAGAACAGAAAGAGCGGGCCAAAAGGAAAGCGTCCCGAGACGCCGAACAG GAGGTAAGGTGGCCTTCTCTCTCGTGTGCTGGGTGATATTCGCCACCTCC CGTAGGACTAGCTACTGTGTAGAGCAGTAGCGGGTATGTCGGCTTCCCTT CGTTTTGGCTTGGTGGGTTCTCTCGATCATGGGTGTGGTAAGCCGGAAGG TGTAGCCTTGTTTCAGGTTTCCGGGGGGAGGCGACGGTGCCGACACAGAG CTGCCAAATAGGCTGAACGTGCGAGCATACACAGAGGCAAAAGACAGAAC TAAGCGTGGTACAAGAGACAAGTGATGCTGCCAACTCGTCCCAACAAGCT CTGCCTTTGTCGCGGTGGCATGTATGTATGAGACAGGGCAAACACGACTC CCAATAGCTGCCATTTCCACCCGTATTATTCAAACGAGGAGATGTCGTGC TTTCTTACGACTCTAGTCGTCGATGCTGCTCGGGGAAACGTATACACGCA GGTAGCAGGTAGTGCCGCTGAGACTGAATCCGGTCCCCGCCCGCCTTCTC ACTCGCCGCAGTTCTCATCGCACGACGAGTTAGTTTGTTGTGCAAGGTTT TAGGCAGCAGTGGGAGTTCTCTCATTATTGCCGCTGCCAATACACAACCG TTCGAGGGAATTCGTTTTTGTTCGGTTGGTGGTGCCACGGTCGTGTGTGC CCCGTTGTCGTGGGGGTCCCTGTCCTTTCGAGCAATGATCGCGCCGAGCT TGTCCCTGATACCACTCCCATCCGTGCAAACAACGCCGGGACGTCGGGAC CACCGCCATAACGTACGTACGAACTCGATTTCGCAAGGTGCAAAGGCGGG AACACTTTCGCATGTCCAAGGCGGCGCAGTTCGTGGATAGGCGCTTGCAG CAAGACCTCAGCCGAGCCCGGAGGCTGGTCGAGAGCCTGGACGAAACTTC GGGGAGGACAAGGTGAGGCGAGGCATTGAAAGACCTATCTCTGCTTCCGC AGAGTGTGTGGGTGCGCCACGTTTTGTTGTCCCCGCCGTTTGTTTCGTGG TGTCGAGCCTGCGTGTGTCTCGCGCCGCCAGCGGCACGATATGGTGAGCC TGCTTGCGGGAGCACCGTCTTGGTCTGGTCCGAACCGCTTGTTTTGGTGG ATGGATACTGGGACGCACGGCCTCTGATTCGATATGAATATGGATCCGCG GGGATCCGCGGGAGACTCGATGGCGTGCCGGCGGGCCACGCACTGCTGTG GTCTTTCGTGTTTCCTGATCCTTTTCCCGCTTTCTCTTGACGACCGTCGT TGCACTTTTTTTTTGTACAACAGAAACTCTTCACTCCCGAACGCAAGTAG GAACACGCTGGCGCAGAGTTATATCCACCACCACCACCTCCGGCAATACC CACCTTCTTTCTGATGTTTGCTCTCTCTCTCTCTCTCTCTCTCTCTCAAC CTTGGAAGGTCGATCATGTGGCCGGACGAAGAACAGGAGAGCTTAGACGA GGATCCCAATGGCGGCGGCGGCTGCGGCGGCAGTTACTTTAACGACCAGG GCCTGAGGAGCGGCATCGACACCGACGCCGCTGGCACCACAGCTGGGCCT TTACAGGCATGGGATGGAACGGATAGCAGAGGGGAGACCCTCTCTACGGA GCCTAAGGAAGCAAAGGGGGAGGCAAGCACTAGCGAGGAAGGGATGGGGG AGGACGGGGGGCTCCGAGAAGAGTGGGACGTCATGACGGCGGATGAAAAG GTGGGCGTGTGTTGCCGTCCGTGTTGTGAAGAGGGGCGACGATAGGCTAT GGATTCCCGTTTGTCTGCTACGTGGCATTTTGCTGTTCATGCAACAGTAG TGCATATGTAGCAGGTGTGTATGTGGGTGTGTTTCTTGCTTGCGCATCGA CATCACGTGAGTCGTTGGCGGGATCATAAACCGCGAACACGTTGTCTAAT CGAAGGGTTCTACCGACCGGGGCGAGTGCGCGTGTGTGTTTCTTTGATTA ACATCTAGCGCGACCAAAAAGCGCGAACACCCTTTCTAGTCATCGGGTTC CCCCGACAGGGGGGCGTCGCGGAGGAGATTGGACGACAGGGTCGTCCAGT CGGACGATAGGGTCGTCCAGTCTCTGGTGTCCGTGTGTTTGTCTCTGGTT GGCTACATATTCTTGCTGTCGTCTCTGTCGAGGTTTTACGTGTTCCCTCA GTTGTCTGTAGCGCGGAACGACAAGGTATCAATCAGGTCCTGGAGTGTCT CCTCGTCGCGTTCGTTCGAGCTTAACTTGCAACGACACCGTCGAGCCGTC AATGACACCGAAGGCTACGAACACGGTTGACGCGGGACACTGGTGGATCG AGTGCATCATTTTGTACCACCCTCTTGGCGTGCTCCCTCTCGAGCCAAAC TCTCGGCGTTGCCACCTGGCGTTCTCCAAAGAAAAGCCGTGCAGTACGTA CTTCCGTTCCCGACGCTTCTACTGCGATAACCCTCTGTTCTTGGCGATGC GCCTCCCCTCCGTCTGCCCACTGCATCTCCCTCTCGCACCCCCGTGTAGC TATCGGCGTGCCTGGCCTACCTCCGTGCGAGCTACTCGTACTGCATGTAC TGCGCCTGCCGGTACGAAGGTCTGCGAGATCTGCAGGACTCGTGCCCCGG GCCTAGCCGGAGCGATCACGACGACGAAGAGATGTAA
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig9:637707..643493+

>mRNA_Ecto-sp6_S_contig9.18057.1 ID=mRNA_Ecto-sp6_S_contig9.18057.1|Name=mRNA_Ecto-sp6_S_contig9.18057.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1029bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:637707..643493+ (Ectocarpus species6 EcLAC_371)
ATGGCGTCGAGATTCAAGCGTCAGCGAGCCAAGGCGTTGAACCCTGCATC
AGCAGGAGGAGCAGCAACGTCCACTCCGGCGTTCGGAGACGAGGACGACT
ACCTGTCGGCGTCGTTTGTGGTGGAAGAACCGAACAAGCCGCGCGGCAAG
CGAGCGCAGCAAGAGGCAGACCCAGAGCGGGGAAGAGGCAAGTCGCTGCT
GTCCAAGAAAGATATCGCCAAGAAGATGGAGGACAGGAGAGAGGAAGGGT
TGCAGCAGAAGATAGGGGAGGAGAACGCAGGCTTTAAACTTCTCATGAAG
CTGGGGTACAAGGGAGGGGGGCTCGGCAAGGACGGCGAGGGCACAACGAA
GCCGTTGATGCCGGAGCTGAAGCAGGGTCGGGCAGGGTTGGGCAAGGAGT
CGGAGTCCAAGCGAAGAAAAGAAGAACAGAAAGAGCGGGCCAAAAGGAAA
GCGTCCCGAGACGCCGAACAGGAGGTGCAAAGGCGGGAACACTTTCGCAT
GTCCAAGGCGGCGCAGTTCGTGGATAGGCGCTTGCAGCAAGACCTCAGCC
GAGCCCGGAGGCTGGTCGAGAGCCTGGACGAAACTTCGGGGAGGACAAGG
TCGATCATGTGGCCGGACGAAGAACAGGAGAGCTTAGACGAGGATCCCAA
TGGCGGCGGCGGCTGCGGCGGCAGTTACTTTAACGACCAGGGCCTGAGGA
GCGGCATCGACACCGACGCCGCTGGCACCACAGCTGGGCCTTTACAGGCA
TGGGATGGAACGGATAGCAGAGGGGAGACCCTCTCTACGGAGCCTAAGGA
AGCAAAGGGGGAGGCAAGCACTAGCGAGGAAGGGATGGGGGAGGACGGGG
GGCTCCGAGAAGAGTGGGACGTCATGACGGCGGATGAAAAGCTATCGGCG
TGCCTGGCCTACCTCCGTGCGAGCTACTCGTACTGCATGTACTGCGCCTG
CCGGTACGAAGGTCTGCGAGATCTGCAGGACTCGTGCCCCGGGCCTAGCC
GGAGCGATCACGACGACGAAGAGATGTAA
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