mRNA_Ecto-sp6_S_contig9.18055.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig9.18055.1
Unique NamemRNA_Ecto-sp6_S_contig9.18055.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
BLAST of mRNA_Ecto-sp6_S_contig9.18055.1 vs. uniprot
Match: D8LM29_ECTSI (N-acyl-aliphatic-L-amino acid amidohydrolase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM29_ECTSI)

HSP 1 Score: 907 bits (2343), Expect = 0.000e+0
Identity = 442/446 (99.10%), Postives = 444/446 (99.55%), Query Frame = 1
Query:   85 MAEDLASATHAVEAFREFLRIRSVSAEGPQGAYAEAAKWVSDYARDQAGLTSIKTVEYSAGKPVVLMEWPGLEPDLPCVLLNSHYDVVPAMPEHWDTDPFAAVVKDEAGGGRIYGRGTQDMKCVCVQYLVAIARLRRSGFQPTRTVHLSFVPDEEIGGADGISLLLASEEWKALGPVGIALDEGLANPRNAFTVFYGERTPWWLLVKAEGPTGHGSRFIKDTAVQKLMAVCDKALAFRKEQEDALGHTGGCSHARAKKLGDVTTLNLTMLKAGVAMAGGGDGGGAEAATKHERYALNVIPTEARAGFDVRIDPNTPTEDFKARLAGWCKEEGVTWELADWTTPLHEHYLTSVDRDVNPWWGVFLDTMKDVGVEIEPEIFPASTDSRYLREVGIPALGFSPMRNTPILLHDHNEYIAQDVFMDGIEVYERLITALASAERLPTEGKP 1422
            MAEDLASATHAVEAFREFLRIRSVSAEGPQGAYAEAAKWVSDYARDQAGLTSIKTVEYSAGKPVVLMEWPG EPDLPCVLLNSHYDVVPAMPEHW TDPFAAV+KDEAGGGRIYGRGTQDMKCVCVQYLVAIARLRRSGFQPTRTVHLSFVPDEEIGGADGISLLLASEEWKALGPVGIALDEGLANPRNAFTVFYGERTPWWLLVKAEGPTGHGSRFIKDTAVQKLMAVCDKALAFRKEQEDALGHTGGCSHARAKKLGDVTTLNLTMLKAGVAMAGGGDGGGAEAATKHERYALNVIPTEARAGFDVRIDPNTPTEDFKARLAGWCKEEGVTWELADWTTPLHEHYLTSVDRDVNPWWGVFLDTMKDVGVEIEPEIFPASTDSRYLRE+GIPALGFSPMRNTPILLHDHNEYIAQDVFMDGIEVYERLITALASAERLPTEGKP
Sbjct:    1 MAEDLASATHAVEAFREFLRIRSVSAEGPQGAYAEAAKWVSDYARDQAGLTSIKTVEYSAGKPVVLMEWPGSEPDLPCVLLNSHYDVVPAMPEHWHTDPFAAVMKDEAGGGRIYGRGTQDMKCVCVQYLVAIARLRRSGFQPTRTVHLSFVPDEEIGGADGISLLLASEEWKALGPVGIALDEGLANPRNAFTVFYGERTPWWLLVKAEGPTGHGSRFIKDTAVQKLMAVCDKALAFRKEQEDALGHTGGCSHARAKKLGDVTTLNLTMLKAGVAMAGGGDGGGAEAATKHERYALNVIPTEARAGFDVRIDPNTPTEDFKARLAGWCKEEGVTWELADWTTPLHEHYLTSVDRDVNPWWGVFLDTMKDVGVEIEPEIFPASTDSRYLRELGIPALGFSPMRNTPILLHDHNEYIAQDVFMDGIEVYERLITALASAERLPTEGKP 446          
BLAST of mRNA_Ecto-sp6_S_contig9.18055.1 vs. uniprot
Match: A0A835Z8B4_9STRA (N-acyl-aliphatic-L-amino acid amidohydrolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8B4_9STRA)

HSP 1 Score: 571 bits (1472), Expect = 2.360e-196
Identity = 273/433 (63.05%), Postives = 331/433 (76.44%), Query Frame = 1
Query:  118 VEAFREFLRIRSVSAEGPQGAYAEAAKWVSDYARDQAGLTSIKTVEYSAGKPVVLMEWPGLEPDLPCVLLNSHYDVVPAMPEHWDTDPFAAVVKDEAGGGRIYGRGTQDMKCVCVQYLVAIARLRRSGFQPTRTVHLSFVPDEEIGGADGISLLLASEEWKALGPVGIALDEGLANPRNAFTVFYGERTPWWLLVKAEGPTGHGSRFIKDTAVQKLMAVCDKALAFRKEQEDALGHTGGCSHARAKKLGDVTTLNLTMLKAGVAMAGGGDGGGAEAATKHERYALNVIPTEARAGFDVRIDPNTPTEDFKARLAGWCKEEGVTWELADWTTPLHEHYLTSVDRDVNPWWGVFLDTMKDVGVEIEPEIFPASTDSRYLREVGIPALGFSPMRNTPILLHDHNEYIAQDVFMDGIEVYERLITALASAERLPTEG 1416
            V  FREFLRIRS+S EGP+G Y  A  W++ Y  D   L S +TV    GKP+++++WPG EP LP V+LNSHYDVVPAM EHW  D FAA   +E   GRIYGRG QDMKCVC+QYL AI RL    +QP RTV+L+FVPDEE+GG +G+ + L + ++ AL P+GIALDEGLANP NA+TVFYGERTPWWLLVKAEGPTGHGSRFI+ TA+ KL+ VC+KAL FR+ Q   LGH+GGCSHA AK LGDVTTLNLTML+ GV + GG              Y+LNVIPTEA+AGFDVRI   TP  +F+A +  WC+ EGV+W  A WTTPLH+HYLTS+DRDVNPWWG+FLD M   GV +EPEIFPA+TDSR+LR +G+ ALGFSPMR TP+LLH+H+E++ +DVF++GI+VYERL+ ALA A RL TE 
Sbjct:   10 VSRFREFLRIRSISGEGPKGVYQTAVDWLTRYVDDLLHL-SWETVSPCKGKPILIVKWPGSEPSLPSVVLNSHYDVVPAMQEHWTVDAFAAEKTEE---GRIYGRGAQDMKCVCIQYLEAIRRLIERRWQPRRTVYLTFVPDEELGGTEGMGVFLETPQFAALQPIGIALDEGLANPSNAYTVFYGERTPWWLLVKAEGPTGHGSRFIEGTAMAKLVDVCNKALEFRRAQRAELGHSGGCSHAAAKTLGDVTTLNLTMLRGGVTLDGGAT------------YSLNVIPTEAQAGFDVRICARTPPSEFRALIDDWCRAEGVSWSFAPWTTPLHDHYLTSIDRDVNPWWGMFLDAMAHGGVPVEPEIFPAATDSRFLRRIGVAALGFSPMRRTPVLLHEHDEWLHEDVFLEGIDVYERLVEALAGAPRLRTEA 426          
BLAST of mRNA_Ecto-sp6_S_contig9.18055.1 vs. uniprot
Match: A0A813KZF2_POLGL (N-acyl-aliphatic-L-amino acid amidohydrolase n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813KZF2_POLGL)

HSP 1 Score: 543 bits (1399), Expect = 1.400e-185
Identity = 277/446 (62.11%), Postives = 330/446 (73.99%), Query Frame = 1
Query:  118 VEAFREFLRIRSVSAEGPQ-GAYAEAAKWVSDYARDQAGLTSIKTVEYSAGKPVVLMEWPGLEPDLPCVLLNSHYDVVPAMPEHWDTDPFAAVVKDEAGGGRIYGRGTQDMKCVCVQYLVAIARLRRSGFQPTRTVHLSFVPDEEIGGADGISLLLASEEWKALGPVGIALDEGLANPRNAFTVFYGERTPWWLLVKAEGPTGHGSRFIKDTAVQKLMAVCDKALAFRKEQEDALGHTG-GCSHARAKKLGDVTTLNLTMLKAGVAMAGGGDGGGAEAATKHERYALNVIPTEARAGFDVRIDPNTPTEDFKARLAGWCKEE-GVTWELADWTTPLHEHYLTSVDRDVNPWWGVFLDTMKDVGVEIEPEIFPASTDSRYLREVGIPALGFSPMRNTPILLHDHNEYIAQDVFMDGIEVYERLITALASAERLPTEGKP*DVWRRPV 1446
            VE FREFL+IRSVS EGP  G+YA+A  W+      +AGLT+ +T+E   GKPV+L  W G E  LP +LLNSHYDVVPAM + W  DP+AA VKD    GRIYGRGTQDMKCVCVQYLVAI RLR  GF P RT+H+SFVPDEEIGGADG+  LL S E+K LGP+ + LDEGLA+P NAFTVFYGERTPWW+LV+A GPTGHGSRFIKDTA QKL+ + ++AL+FRK QE+ LGH   GC H  AKKLGDVTT+NLTML+ GV    G            E +ALNVIP EA AGFDVRI P+   +DF A L  WC+EE G+TW+ A WT PLHEH+ T+VD D NPWW  F D +  +GV++EPE+FPA+TDSR++R++GIPALGFSPMRN PILLH+H+EYI  DVFM GI+VY  LI  LA   +LP+E +     RR V
Sbjct:    9 VECFREFLKIRSVSGEGPSSGSYAQAVAWLQYAQCLRAGLTT-RTLEPVKGKPVLLATWLGKEEHLPALLLNSHYDVVPAMADCWTVDPWAAEVKD----GRIYGRGTQDMKCVCVQYLVAIQRLRAKGFVPQRTLHMSFVPDEEIGGADGMGKLLDSAEFKELGPIALVLDEGLASPSNAFTVFYGERTPWWILVRATGPTGHGSRFIKDTAPQKLLRMAERALSFRKAQEEDLGHDAHGCKHGSAKKLGDVTTVNLTMLRCGVTTDNG------------ETFALNVIPNEAEAGFDVRITPHLKPKDFSALLDKWCQEEEGITWQFAPWTRPLHEHFTTAVD-DSNPWWVAFRDIVVGMGVQVEPEVFPAATDSRFIRQLGIPALGFSPMRNCPILLHEHDEYIPIDVFMSGIDVYVTLIAGLADHPQLPSEVEAVAAKRRKV 436          
BLAST of mRNA_Ecto-sp6_S_contig9.18055.1 vs. uniprot
Match: A0A812MHX2_SYMMI (N-acyl-aliphatic-L-amino acid amidohydrolase n=4 Tax=Symbiodinium TaxID=2949 RepID=A0A812MHX2_SYMMI)

HSP 1 Score: 533 bits (1373), Expect = 1.420e-181
Identity = 269/435 (61.84%), Postives = 322/435 (74.02%), Query Frame = 1
Query:  121 EAFREFLRIRSVSAEGPQGAYAEAAKWVSDYARDQAGLTSIKTVEYSAGKPVVLMEWPGLEPDLPCVLLNSHYDVVPAMPEHWDTDPFAAVVKDEAGGGRIYGRGTQDMKCVCVQYLVAIARLRRSGFQPTRTVHLSFVPDEEIGGADGISLLLASEEWKALGPVGIALDEGLANPRNAFTVFYGERTPWWLLVKAEGPTGHGSRFIKDTAVQKLMAVCDKALAFRKEQEDALGH-TGGCSHARAKKLGDVTTLNLTMLKAGVAMAGGGDGGGAEAATKHERYALNVIPTEARAGFDVRIDPNTPTEDFKARLAGWCKE-EGVTWELADWTTPLHEHYLTSVDRDVNPWWGVFLDTMKDVGVEIEPEIFPASTDSRYLREVGIPALGFSPMRNTPILLHDHNEYIAQDVFMDGIEVYERLITALASAERLPTEGK 1419
            E FR+FLRIRSVS EGPQG+YAEA  W++   R + GLT+ K VE   GKP++L  W G +  LPC+LLNSHYDVVPAM E W  DP+AA V D    GRIYGRGTQDMK VCVQYL AI RLR+ GF P RT+HLSFVPDEEIGG +G+  LL + E+ ALG +G+ALDEGL+NP +AFTVFYGERTPWWLLV+A GPTGHGSRFIK+TA QKL+   ++ALAFRK QED+LGH + GC H  AKKLGDVTT+NLTML+ GV+   G            + + LNVIPTEA AGFDVRI P+   +DFK  L  WCKE EG+TW++A WT    EH+ T+ D   NPWW  F D M  +  +IEPE+FPA+TDSR+LRE+GIPALGFSPMR  PILLH+H+EY+  DVFM GI+VY  LI ALAS ++L  E +
Sbjct:   10 ELFRDFLRIRSVSGEGPQGSYAEAVAWLTAQCR-RLGLTT-KQVEPVKGKPILLATWAGSDDSLPCLLLNSHYDVVPAMTECWSVDPWAAEVVD----GRIYGRGTQDMKSVCVQYLFAIERLRKRGFVPLRTIHLSFVPDEEIGGVEGMGELLKTPEFNALGEIGLALDEGLSNPGDAFTVFYGERTPWWLLVRATGPTGHGSRFIKNTAPQKLLRFAERALAFRKAQEDSLGHGSNGCKHGTAKKLGDVTTVNLTMLRCGVSNDNG------------KTFCLNVIPTEAEAGFDVRITPDLKPKDFKNLLDQWCKEDEGITWQIAPWTRAFQEHHTTATDES-NPWWVAFRDAMSSMSFDIEPEVFPAATDSRFLRELGIPALGFSPMRRCPILLHEHDEYLPVDVFMSGIDVYVGLIDALASKQKLQGEDE 425          
BLAST of mRNA_Ecto-sp6_S_contig9.18055.1 vs. uniprot
Match: A0A1Q9CTU4_SYMMI (N-acyl-aliphatic-L-amino acid amidohydrolase n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9CTU4_SYMMI)

HSP 1 Score: 534 bits (1376), Expect = 1.850e-180
Identity = 272/441 (61.68%), Postives = 326/441 (73.92%), Query Frame = 1
Query:  121 EAFREFLRIRSVSAEGPQGAYAEAAKWVSDYARDQAGLTSIKTVEYSAGKPVVLMEWPGLEPDLPCVLLNSHYDVVPAMPEHWDTDPFAAVVKDEAGGGRIYGRGTQDMKCVCVQYLVAIARLRRSGFQPTRTVHLSFVPDEEIGGADGISLLLASEEWKALGPVGIALDEGLANPRNAFTVFYGERTPWWLLVKAEGPTGHGSRFIKDTAVQKLMAVCDKALAFRKEQEDALGH-TGGCSHARAKKLGDVTTLNLTMLKAGVAMAGGGDGGGAEAATKHERYALNVIPTEARAGFDVRIDPNTPTEDFKARLAGWCKE-EGVTWELADWTTPLHEHYLTSVDRDVNPWWGVFLDTMKDVGVEIEPEIFPASTDSRYLREVGIPALGFSPMRNTPILLHDHNEYIAQDVFMDGIEVYERLITALASAERLPTEGKP*DVWR 1437
            E FR+FLRIRSVS EGPQG+YAEA  W++   R + GLT+ K VE   GKP++L  W G +  LPC+LLNSHYDVVPAM E W  DP+AA V D    GRIYGRGTQDMK VCVQYL AI RLR+ GF P RT+HLSFVPDEEIGG +G+  LL + E+ ALG +G+ALDEGL+NP +AFTVFYGERTPWWLLV+A GPTGHGSRFIK+TA QKL+   ++ALAFRK QED+LGH + GC H  AKKLGDVTT+NLTML+ GV+   G            + + LNVIPTEA AGFDVRI P+   +DFK  L  WCKE EG+TW++A WT    EH+ T+ D   NPWW  F D M  +  +IEPE+FPA+TDSR+LRE+GIPALGFSPMR  PILLH+H+EY+  DVFM GI+VY  LI ALAS ++L  +G+  DV R
Sbjct:   10 ELFRDFLRIRSVSGEGPQGSYAEAVAWLTAQCR-RLGLTT-KQVEPVKGKPILLATWAGSDDSLPCLLLNSHYDVVPAMTECWSVDPWAAEVVD----GRIYGRGTQDMKSVCVQYLFAIERLRKRGFVPLRTIHLSFVPDEEIGGVEGMGELLKTPEFNALGEIGLALDEGLSNPGDAFTVFYGERTPWWLLVRATGPTGHGSRFIKNTAPQKLLRFAERALAFRKAQEDSLGHGSNGCKHGTAKKLGDVTTVNLTMLRCGVSNDNG------------KTFCLNVIPTEAEAGFDVRITPDLKPKDFKNLLDQWCKEDEGITWQIAPWTRAFQEHHTTATDES-NPWWVAFRDAMSSMSFDIEPEVFPAATDSRFLRELGIPALGFSPMRRCPILLHEHDEYLPVDVFMSGIDVYVGLIDALASKQKL--QGEDEDVQR 429          
BLAST of mRNA_Ecto-sp6_S_contig9.18055.1 vs. uniprot
Match: A0A7S4LCU3_9EUGL (N-acyl-aliphatic-L-amino acid amidohydrolase n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4LCU3_9EUGL)

HSP 1 Score: 524 bits (1349), Expect = 1.970e-177
Identity = 262/431 (60.79%), Postives = 320/431 (74.25%), Query Frame = 1
Query:  115 AVEAFREFLRIRSVSAEGPQGAYAEAAKWVSDYARDQAGLTSIKTVEYSAGKPVVLMEWPGLEP--DLPCVLLNSHYDVVPAMPEHWDTDPFAAVVKDEAGGGRIYGRGTQDMKCVCVQYLVAIARLRRSGFQPTRTVHLSFVPDEEIGGADGISLLLASEEWKALGPVGIALDEGLANPRNAFTVFYGERTPWWLLVKAEGPTGHGSRFIKDTAVQKLMAVCDKALAFRKEQEDALGHTG-GCSHARAKKLGDVTTLNLTMLKAGVAMAGGGDGGGAEAATKHERYALNVIPTEARAGFDVRIDPNTPTEDFKARLAGWCKEEGVTWELADWTTPLHEHYLTSVDRDVNPWWGVFLDTMKDVGVEIEPEIFPASTDSRYLREVGIPALGFSPMRNTPILLHDHNEYIAQDVFMDGIEVYERLITALASAE 1398
            A+  F+EF+RI+++S EGP+GAY EAA W++ + +   GL  ++ V    GKPV+L  W G  P  DLP VLLNSHYDVVP M EHWD DPF AV     G  RIYGRGTQDMKCVC+QYL+AI RL+  G+ P RTVHL+FVPDEEIGGA+G+   L S+ +K+L  VG+ +DEGLANP NAFTVFYGERTPWW++VKA+GPTGHGSRFIKDTA  KLM V +KALAFRKEQE  LG++G GC+HA+AKKLGDVTT+NLTML+AGV   GG              +ALNVIPTEARAGFD+R+ P+    D +ARL  W + EGV+W+ A WTTPL +H+LTS DR  N WWGV  D +   G  +E EIFPA TDSR++R +G+PA GFSPM NTPILLH+HNEYI + VF++G++VY  LI AL S E
Sbjct:   48 AIAMFQEFIRIKTISFEGPKGAYREAADWLTGHCKAM-GL-GVREVSPVPGKPVLLATWEGQVPEKDLPSVLLNSHYDVVPCMREHWDCDPFEAVWDKTTG--RIYGRGTQDMKCVCIQYLLAIKRLQHKGYTPRRTVHLTFVPDEEIGGAEGMLEFLKSDLYKSLN-VGVGMDEGLANPDNAFTVFYGERTPWWVIVKAQGPTGHGSRFIKDTAPMKLMNVANKALAFRKEQEHELGYSGEGCTHAQAKKLGDVTTVNLTMLEAGVTSDGG------------HTFALNVIPTEARAGFDIRVSPSMDPADMQARLTEWTEAEGVSWDYAHWTTPLLKHHLTSTDRTKNAWWGVLEDAVTAAGFTLELEIFPAGTDSRFIRALGVPAFGFSPMANTPILLHEHNEYIDEGVFLEGVDVYVTLIEALGSFE 461          
BLAST of mRNA_Ecto-sp6_S_contig9.18055.1 vs. uniprot
Match: K3X9N2_GLOUD (M20_dimer domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X9N2_GLOUD)

HSP 1 Score: 486 bits (1252), Expect = 1.110e-163
Identity = 240/432 (55.56%), Postives = 299/432 (69.21%), Query Frame = 1
Query:   97 LASATHAVEAFREFLRIRSVSAEGPQGAYAEAAKWVSDYARDQAGLTSIKTVEYSAGKPVVLMEWPGLEPDLPCVLLNSHYDVVPAMPEHWDTDPFAAVVKDEAGGGRIYGRGTQDMKCVCVQYLVAIARLRRSGFQPTRTVHLSFVPDEEIGGADGISLLLASEEWKALGPVGIALDEGLANPRNAFTVFYGERTPWWLLVKAEGPTGHGSRFIKDTAVQKLMAVCDKALAFRKEQEDALGHTGGCSHA--RAKKLGDVTTLNLTMLKAGVAMAGGGDGGGAEAATKHERYALNVIPTEARAGFDVRIDPNTPTEDFKARLAGWCKEEGVTWELADWTTPLHEHYLTSVDRDVNPWWGVFLDTMKDVGVEIEPEIFPASTDSRYLREVGIPALGFSPMRNTPILLHDHNEYIAQDVFMDGIEVYERLITAL 1386
            +A    AV  F EFLR R++S EGP G+Y E A W+ DY  ++ GLT +K       KPVVL  W G +P LP ++LNSHYDVVP M EHW  DPF A V ++   GRIYGRGTQDMK VC+QY  A+ RL+ SGF P R ++L +VPDEEIGGA G+   L  EE++A+ P+  A DEGLANP NAFTVFYGER PWW  V AEGPTGHGSRFIK+TA  K++ +C+KALAFR+EQE+ L    GC H   + +KLGDVTT+N+T L++GV+  GG            + +ALNVIPT A AGFDVRI PN    +FKA L  WC  EGV+WE   WT PLHEHY T +D D N WW +F  + + +GV +E E+FPA+TDSR+LR+VGIPALGFSPM NT ILLH+HNE + +D F+ G++VY  +   L
Sbjct:    1 MADRKDAVTRFLEFLRFRTISGEGPHGSYQECANWLRDY-MEEIGLT-VKVFSPIENKPVVLATWAGEDPSLPGIILNSHYDVVPVMREHWQYDPFDAKVLED---GRIYGRGTQDMKSVCIQYAEAVYRLKSSGFTPKRNIYLLYVPDEEIGGAQGMEEFLLHEEFQAIQPIAFAFDEGLANPSNAFTVFYGERVPWWFYVTAEGPTGHGSRFIKNTATSKIIDICNKALAFREEQENKLSADPGCKHGDMKKRKLGDVTTVNITALQSGVSTDGG------------KTHALNVIPTTAIAGFDVRISPNLDMAEFKAMLDTWCAAEGVSWEFTSWTNPLHEHYTTKLDDD-NVWWVLFKKSCEKLGVPLETEVFPAATDSRFLRKVGIPALGFSPMSNTEILLHEHNESLQKDTFLKGVDVYATIFQDL 414          
BLAST of mRNA_Ecto-sp6_S_contig9.18055.1 vs. uniprot
Match: A0A1V9ZTU8_9STRA (N-acyl-aliphatic-L-amino acid amidohydrolase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZTU8_9STRA)

HSP 1 Score: 481 bits (1239), Expect = 9.800e-162
Identity = 240/427 (56.21%), Postives = 300/427 (70.26%), Query Frame = 1
Query:  112 HAVEAFREFLRIRSVSAEGPQGAYAEAAKWVSDYARDQAGLTSIKTVEYSAGKPVVLMEWPGLEPDLPCVLLNSHYDVVPAMPEHWDTDPFAAVVKDEAGGGRIYGRGTQDMKCVCVQYLVAIARLRRSGFQPTRTVHLSFVPDEEIGGADGISLLLASEEWKALGPVGIALDEGLANPRNAFTVFYGERTPWWLLVKAEGPTGHGSRFIKDTAVQKLMAVCDKALAFRKEQEDALGHTGGCSHA--RAKKLGDVTTLNLTMLKAGVAMAGGGDGGGAEAATKHERYALNVIPTEARAGFDVRIDPNTPTEDFKARLAGWCKEEGVTWELADWTTPLHEHYLTSVDRDVNPWWGVFLDTMKDVGVEIEPEIFPASTDSRYLREVGIPALGFSPMRNTPILLHDHNEYIAQDVFMDGIEVYERLITAL 1386
            +A+  F+E LRI ++S  GP+GAY + A W+ DY     GLT+       AGKP+VL  W G +P LP VLLNSHYDVVP M E W  DPF A + D    G I  RGTQDMK VC+QY+ A+  L+ SGF P R +H+ FVPDEEIGG DG+   L S E+KA+ P+ IALDEGLANP N FTVFYGERTPWW+ VKA GPTGHGSRFI++TA  KL+A+C+KALAFR EQE ALG + GC H   + KKLGDVTT+NLTMLK+GV+M GG              YALNVIPTEA AGFD+RI PNT   +F+  L  WC+ +GV+W       PLHEH++T+VD   NP    FL+T K++G+EI+ ++FPA+TDSR+LR++G+PALGFSPM NT +LLH+HNE + +D F+ GI VY  + T L
Sbjct:    8 NAIRHFQELLRIPTISGSGPKGAYDKCASWLVDYLAG-VGLTA-HVFSPVAGKPIVLATWAGKDPTLPGVLLNSHYDVVPVMAESWKYDPFGAEILDN---GMIVARGTQDMKSVCIQYVEAVRLLKESGFVPARNIHICFVPDEEIGGVDGMGEFLKSAEYKAIQPLAIALDEGLANPTNKFTVFYGERTPWWIYVKATGPTGHGSRFIENTATSKLIAICNKALAFRAEQEKALGASCGCKHGDMKKKKLGDVTTINLTMLKSGVSMDGGAS------------YALNVIPTEATAGFDIRISPNTDLTEFQNMLNEWCEADGVSWSYM--VKPLHEHHVTAVDEATNPLCHKFLETCKELGMEIDLDVFPAATDSRFLRQLGVPALGFSPMNNTEVLLHEHNEMLHKDTFVKGIYVYRDIFTRL 415          
BLAST of mRNA_Ecto-sp6_S_contig9.18055.1 vs. uniprot
Match: A0A6A3LTW2_9STRA (N-acyl-aliphatic-L-amino acid amidohydrolase n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3LTW2_9STRA)

HSP 1 Score: 480 bits (1236), Expect = 2.780e-161
Identity = 235/429 (54.78%), Postives = 304/429 (70.86%), Query Frame = 1
Query:  118 VEAFREFLRIRSVSAEGPQGAYAEAAKWVSDYARDQAGLTSIKTVEYSAGKPVVLMEWPGLEPDLPCVLLNSHYDVVPAMPEHWDTDPFAAVVKDEAGGGRIYGRGTQDMKCVCVQYLVAIARLRRSGFQPTRTVHLSFVPDEEIGGADGISLLLASEEWKALGPVGIALDEGLANPRNAFTVFYGERTPWWLLVKAEGPTGHGSRFIKDTAVQKLMAVCDKALAFRKEQEDALGHTGGCSHARAKK--LGDVTTLNLTMLKAGVAMAGGGDGGGAEAATKHERYALNVIPTEARAGFDVRIDPNTPTEDFKARLAGWCKEEGVTWELADWTTPLHEHYLTSVDRDVNPWWGVFLDTMKDVGVEIEPEIFPASTDSRYLREVGIPALGFSPMRNTPILLHDHNEYIAQDVFMDGIEVYERLITALASAE 1398
            VE F E L++R+VSAEGP G+Y E A W+  Y  ++ GL +++       KPVVL  W G +P LP ++LNSHYDVVPA+ EHW  DPF A V D+   GRIYGRGTQDMK VC+QY+ A+  L  SGF+P R +HL FVPDEEIGGA+G+   + SE++K++ P   A DEGLANP +AFTVFYGER+PWW+ VKAEGPTGHGSRFIK+TA  K++ +C+KALAFR EQE  LG   GC H   KK  LGDVTT+N+T L++GV+  GG            + +ALNVIPTEA AGFD+R+ P    +  KA+L  WC  EGV+W+ A WT+P+HEHY+TS+D D N WW +F  T   +G ++E EIFPA+TDSR+LR++G+PA+GFSPM+ T ILLH+HNE +A+  F+ GI VY  +   L + E
Sbjct:    7 VERFLELLQLRTVSAEGPNGSYNECAGWLRGYL-EELGL-AVQVFSPVKNKPVVLATWKGEDPKLPGIILNSHYDVVPAIAEHWQFDPFDAKVLDD---GRIYGRGTQDMKSVCIQYVEAVHTLMSSGFKPKRNIHLLFVPDEEIGGAEGMGTFVESEQFKSIMPAAFAFDEGLANPDDAFTVFYGERSPWWVYVKAEGPTGHGSRFIKNTATSKIIDICNKALAFRDEQEKELGADTGCKHGDMKKKQLGDVTTVNITALQSGVSQDGG------------KTHALNVIPTEAVAGFDIRVSPGMDLKAMKAKLDEWCAAEGVSWDFAPWTSPMHEHYVTSLDAD-NVWWQLFQKTCASIGEKLETEIFPAATDSRFLRKMGVPAIGFSPMKRTEILLHEHNESLAKGTFLHGISVYVSIFQELFAHE 417          
BLAST of mRNA_Ecto-sp6_S_contig9.18055.1 vs. uniprot
Match: G4YJB3_PHYSP (N-acyl-aliphatic-L-amino acid amidohydrolase (Fragment) n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YJB3_PHYSP)

HSP 1 Score: 482 bits (1241), Expect = 3.890e-161
Identity = 236/418 (56.46%), Postives = 299/418 (71.53%), Query Frame = 1
Query:  118 VEAFREFLRIRSVSAEGPQGAYAEAAKWVSDYARDQAGLTSIKTVEYSAGKPVVLMEWPGLEPDLPCVLLNSHYDVVPAMPEHWDTDPFAAVVKDEAGGGRIYGRGTQDMKCVCVQYLVAIARLRRSGFQPTRTVHLSFVPDEEIGGADGISLLLASEEWKALGPVGIALDEGLANPRNAFTVFYGERTPWWLLVKAEGPTGHGSRFIKDTAVQKLMAVCDKALAFRKEQEDALGHTGGCSHA--RAKKLGDVTTLNLTMLKAGVAMAGGGDGGGAEAATKHERYALNVIPTEARAGFDVRIDPNTPTEDFKARLAGWCKEEGVTWELADWTTPLHEHYLTSVDRDVNPWWGVFLDTMKDVGVEIEPEIFPASTDSRYLREVGIPALGFSPMRNTPILLHDHNEYIAQDVFMDGIEVY 1365
            VE F E LR+R+VS+EGP G+Y E A+W+        GL  ++       KPVVL  W G +P LP ++LNSHYDVVPAMPEHW  DPF A V D+   GRIYGRGTQDMK VC+QY+ A+  L+ SGF+P R ++L FVPDEEIGGA+G+   L SE++KA+ PV  A DEGLANP + FTVFYGER+PWW+ VKAEGPTGHGSRFIK+TA  K++ +C+KALAFR EQE  LG   GC H   + KKLGDVTT+N+T L++GV+  GG            + +ALNVIPTEA AGFD+R+ P    +  KA+L  WC  EGV+WE A WT+P+HEHY+TS+D D N WW +F      +G ++E EIFPA+TDSR+LR+VG+P +GFSPM+ T ILLH+HNE +A+D F+ GI VY
Sbjct:    7 VERFLELLRLRTVSSEGPNGSYNECAEWL-------LGLP-VQVFSPVENKPVVLATWKGEDPTLPGIILNSHYDVVPAMPEHWQFDPFEAKVLDD---GRIYGRGTQDMKSVCIQYVEAVHTLKSSGFKPKRNIYLLFVPDEEIGGAEGMGNFLESEQFKAIMPVAFAFDEGLANPGDVFTVFYGERSPWWVYVKAEGPTGHGSRFIKNTATSKIIDICNKALAFRDEQEKQLGADCGCKHGDMKKKKLGDVTTVNITALQSGVSQDGG------------KTHALNVIPTEAIAGFDIRVSPGMDLKAMKAKLDKWCAAEGVSWEFAPWTSPMHEHYVTSLDAD-NVWWQLFQKACAGIGEKLETEIFPAATDSRFLRKVGVPVIGFSPMKRTEILLHEHNEGLAKDTFLHGISVY 400          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18055.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LM29_ECTSI0.000e+099.10N-acyl-aliphatic-L-amino acid amidohydrolase n=2 T... [more]
A0A835Z8B4_9STRA2.360e-19663.05N-acyl-aliphatic-L-amino acid amidohydrolase n=1 T... [more]
A0A813KZF2_POLGL1.400e-18562.11N-acyl-aliphatic-L-amino acid amidohydrolase n=1 T... [more]
A0A812MHX2_SYMMI1.420e-18161.84N-acyl-aliphatic-L-amino acid amidohydrolase n=4 T... [more]
A0A1Q9CTU4_SYMMI1.850e-18061.68N-acyl-aliphatic-L-amino acid amidohydrolase n=2 T... [more]
A0A7S4LCU3_9EUGL1.970e-17760.79N-acyl-aliphatic-L-amino acid amidohydrolase n=1 T... [more]
K3X9N2_GLOUD1.110e-16355.56M20_dimer domain-containing protein n=1 Tax=Globis... [more]
A0A1V9ZTU8_9STRA9.800e-16256.21N-acyl-aliphatic-L-amino acid amidohydrolase n=1 T... [more]
A0A6A3LTW2_9STRA2.780e-16154.78N-acyl-aliphatic-L-amino acid amidohydrolase n=3 T... [more]
G4YJB3_PHYSP3.890e-16156.46N-acyl-aliphatic-L-amino acid amidohydrolase (Frag... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig9contigEcto-sp6_S_contig9:626985..630702 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score908.3
Seed ortholog evalue1.4e-261
Seed eggNOG ortholog2880.D8LM29
Preferred nameACY1
Model size2139
KEGG rclassRC00064,RC00300
KEGG koko:K01436,ko:K14677
KEGG ReactionR00669,R10553
KEGG Pathwayko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230
KEGG ModuleM00028
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004046,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006805,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009410,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0019538,GO:0030163,GO:0031982,GO:0042221,GO:0042802,GO:0043170,GO:0043226,GO:0043227,GO:0043230,GO:0044237,GO:0044238,GO:0044421,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716,GO:0070062,GO:0070887,GO:0071466,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1903561
Exons4
EggNOG free text desc.aminoacylase activity
EggNOG OGsCOG0624@1,KOG2275@2759
Ec32 ortholog descriptionPeptidase M20, dimerisation domain
Ec32 orthologEc-14_002670.1
EC3.5.1.14
Cds size1341
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01002,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig9.18055.1prot_Ecto-sp6_S_contig9.18055.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig9 627069..629988 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350522.4113255-UTR-Ecto-sp6_S_contig9:626984..6270681682350522.4113255-UTR-Ecto-sp6_S_contig9:626984..627068Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig9 626985..627068 +
1682350522.4595666-UTR-Ecto-sp6_S_contig9:629988..6307021682350522.4595666-UTR-Ecto-sp6_S_contig9:629988..630702Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig9 629989..630702 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350522.4214249-CDS-Ecto-sp6_S_contig9:627068..6271041682350522.4214249-CDS-Ecto-sp6_S_contig9:627068..627104Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 627069..627104 +
1682350522.4296114-CDS-Ecto-sp6_S_contig9:627960..6285741682350522.4296114-CDS-Ecto-sp6_S_contig9:627960..628574Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 627961..628574 +
1682350522.437312-CDS-Ecto-sp6_S_contig9:629009..6294511682350522.437312-CDS-Ecto-sp6_S_contig9:629009..629451Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 629010..629451 +
1682350522.4505408-CDS-Ecto-sp6_S_contig9:629739..6299881682350522.4505408-CDS-Ecto-sp6_S_contig9:629739..629988Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 629740..629988 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig9.18055.1

>prot_Ecto-sp6_S_contig9.18055.1 ID=prot_Ecto-sp6_S_contig9.18055.1|Name=mRNA_Ecto-sp6_S_contig9.18055.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=447bp
MAEDLASATHAVEAFREFLRIRSVSAEGPQGAYAEAAKWVSDYARDQAGL
TSIKTVEYSAGKPVVLMEWPGLEPDLPCVLLNSHYDVVPAMPEHWDTDPF
AAVVKDEAGGGRIYGRGTQDMKCVCVQYLVAIARLRRSGFQPTRTVHLSF
VPDEEIGGADGISLLLASEEWKALGPVGIALDEGLANPRNAFTVFYGERT
PWWLLVKAEGPTGHGSRFIKDTAVQKLMAVCDKALAFRKEQEDALGHTGG
CSHARAKKLGDVTTLNLTMLKAGVAMAGGGDGGGAEAATKHERYALNVIP
TEARAGFDVRIDPNTPTEDFKARLAGWCKEEGVTWELADWTTPLHEHYLT
SVDRDVNPWWGVFLDTMKDVGVEIEPEIFPASTDSRYLREVGIPALGFSP
MRNTPILLHDHNEYIAQDVFMDGIEVYERLITALASAERLPTEGKP*
back to top

mRNA from alignment at Ecto-sp6_S_contig9:626985..630702+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig9.18055.1 ID=mRNA_Ecto-sp6_S_contig9.18055.1|Name=mRNA_Ecto-sp6_S_contig9.18055.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=3718bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:626985..630702+ (Ectocarpus species6 EcLAC_371)
GGTGTTCCGCCGCGCAGCGCCCCACACCCCACAGCCATAAGGAGGTCAAG GAGTATCGACGCATCGACATATTGACACTGCGCTATGGCTGAGGACTTGG CAAGCGCTACCCATGCTGTGGTGAGTTATTGGGCGCGTCTCATTCTATGA CGCAGATCGCTAGCTTGCATGTACAAGCATGCAGCATAGCAAATACTACG GGTTGTCTCGGGTCAAGTACATCAACAGCCAACAGCCAGCCGTGGTCGCC TCTGACTGCATTTGTACAGCAGTGCAGTGGAATGTCGCTGCTTGAGAGGG CCAACGCATGCAACCGGTTGCAGACCGCTTGTTGTGCTGTAAGATGTCGG TGTGCTGATCCCTCGCCACACTTTGGCTACGCAAAAAAGCACTGTCTGTA CTTCAACATAAACAACAGGTACATACAGACAATGTCCGTAACCTGTGGTA CAGCAGTGACCTACCTGCCACGTGCTCGAGCGCGGTTCCCACATACTACA CGGGTTGGTGTTTAGCAGTGACTACAGCAGTAGCACATCCCTCTCGCTTG AGTTCCACGAGCAGCAGCGACCGGAAACAGGCACTCCTCGGCATACGGCA GTAAGTACATGACGATCCCGAGCTCAAGTTGAACATGTCGGCCATTCATC GCGGAACCGCCAGAGAATCGCAGCCAGCATGTCAACGTATCTTGTGGAAG AGAAGTCTGGAGGGCAACCAAGGTTCGATTTTGGTCCGGGCATGCACACC AAAGGTAGCGTGGACTCCACAGCTGGGTGGCTGCCCTTACGCAGGCCGTA TACGCTCAAACCTTTGTCGGTCCGCGCGAGGGTTTGCGTCTCATGGGCAC GAACGAACCGCCTCGCGTTTCTGTGGTTTTGTCTTACGCTACGTGTTGCG TCCGTCCTCCATGGTACACGGCATCTCGTTACTGATACATATATCCTGCT TTGCTCTTCCCGCCACCCTTTTGAAGGAAGCATTTCGGGAGTTCCTCCGC ATCCGCTCGGTCAGCGCAGAGGGTCCGCAAGGAGCCTACGCGGAGGCGGC GAAGTGGGTCTCGGACTACGCTCGCGACCAAGCCGGGCTGACGTCCATCA AGACCGTCGAGTACTCGGCGGGGAAGCCGGTGGTGCTGATGGAGTGGCCG GGCTTGGAGCCAGACCTGCCCTGCGTGCTGCTCAACTCCCACTACGACGT CGTGCCCGCGATGCCGGAGCATTGGGACACAGACCCCTTCGCGGCGGTGG TGAAGGACGAGGCCGGCGGCGGCCGCATCTACGGCCGCGGCACGCAAGAC ATGAAGTGTGTGTGCGTGCAGTACCTCGTGGCGATCGCCCGGCTTCGCCG GTCCGGGTTCCAACCGACCAGGACCGTGCACCTGAGCTTCGTGCCCGACG AGGAGATCGGGGGCGCGGACGGCATCAGCCTGCTGCTCGCCTCCGAGGAG TGGAAGGCCCTCGGGCCCGTGGGGATCGCGCTCGACGAAGGGCTGGCCAA CCCCAGGAACGCCTTCACCGTGTTCTACGGGGAGAGGACGCCCTGGTGGC TGCTCGTGAAGGCGGAGGGGCCGACAGGCCATGGCAGCCGGTGAGTCGTC CCCGCTTGGCCGAACCGCACCAGCCCGGGTCTGGCTTCCAAGGGTGCTGC TCCTGTCACTGCTGTCAAGTTTTTTGCTCAGGCGTGGCGCGATGCGTGTA GCTGGCGGCGGCCAGGGAGTAGTACCGCGAGCGCTGAACCGTGCCTTGGT TGCGCAGGGGTACAGCATCGGCTCTCTCGCGAGAAACGGCAAGCTGTAGT CCAGGCCCAACCTGAAATCCTTACGTTAGACCAACGTCGAGCACCCTCTA TTGTATAATCCTCGGCACTTCGTTCGATCTGTAGATCATCAAGGGATCGG ACGGGGAGCAAATGGTCAGGTCTGGCATACGTATCGAAGCGAGAATACAG AGCTCCACGTTTACCTATGTGCTTCTCTCGATTCGTGCAACAACACAAGT ACCATGTCAACGTTTCAACATCTAGGTTCATAAAGGACACCGCGGTGCAG AAGCTCATGGCCGTCTGCGACAAGGCGCTGGCGTTCCGGAAGGAGCAGGA GGACGCGCTCGGGCACACCGGCGGCTGCAGTCACGCTCGCGCCAAGAAGC TCGGCGACGTCACGACGCTCAACCTCACCATGCTCAAGGCCGGGGTCGCC ATGGCCGGAGGCGGCGACGGCGGCGGGGCGGAGGCGGCGACCAAGCACGA GCGGTACGCTCTGAACGTCATCCCCACCGAGGCTCGGGCCGGGTTCGACG TGAGGATCGACCCCAATACCCCGACGGAGGACTTCAAGGCCCGCCTGGCC GGGTGGTGCAAGGAGGAAGGCGTGACGTGGGAGCTGGCCGACTGGACCAC GCCGCTGCACGAGCACTACCTGACCTCGGTGGACCGGGACGTTAACCCGT GGTGGGGGGTGTTCTTGGTGAGTGCGTTGATCCCATGTAGCGCGAAACTT CTTTTGCTGCTGCTGCTGCTGTAGATGGCCGGTGTCGGGGCCAAATAATT ATGCGCTTGTGCAGTGCTTTTGAGAGTGTGTGTGTGAATGAAGTAGACAC CGTGTTTTGACAAACCCTTGTGTTTCGTGCAAATTTGTCGCCGTGTTGTC ATCGCTGGCGGCGAGTGTTCCATTCTTGCCTGATTCTTCCGATGCCACTG ACACTTCCTCCTCTCGTGCACGCGGAATGTACGGGCCAATCGTCGCCCCA CGCAGGACACCATGAAAGACGTGGGCGTCGAGATAGAACCAGAGATATTC CCGGCGAGCACAGATAGCCGGTACCTGCGAGAGGTGGGCATCCCGGCCCT GGGCTTCTCCCCGATGAGAAATACGCCCATCCTGCTGCACGATCACAACG AGTACATCGCCCAAGACGTCTTCATGGACGGAATAGAGGTGTACGAGCGC CTCATCACCGCGCTAGCGTCTGCGGAACGACTACCCACGGAGGGGAAGCC GTGAGATGTTTGGAGGAGACCTGTGTGCCCTCGGTCGTGAATACCCGCGG CCGTTCAGGCGAGTTTCCTGACGGTTTCCACTTACGGACGGCGCGGTTGG TGTGCATGTTCATGTGACAGCGACACCCAAAGCTAAAAGCATGTACATGC TGCCCCGTTCGGCCGACCGTTTCTGCGCAGTTGCTGTTCGTAAAGGGTGG CTAAATGGTGTTGGTTTCCGACGCACCTTCGGGGAGGACGAGGAACACTG GGTCGGAAATTCTGCGCGGGTTCACGAGTGGACGCCGGGAGCTTGGTCTA CTAATGCGCATTTCCGTTTTCCCCCAAAATCCCGCCGAGAGAGAGACGGG AGGGAGAGCGGGAGAGAAGAAAAACAAGTAAAGCACTGACGACGAGTCTA ACAGCGACATTTATTGACGGGTTGACAAAGATCCCAATACGAAGGCGGGG TGTGAACATGGTGGTTGCTCAGAAAGGCGACTGATGATACTGGAGCACAC CAGTCGAACACGCCATCCGGTGGTTGCTCTTGTATTTAGGAAACTCCTCT TGACACGTCGGCTAACAGCAGCACGTGTTGACATGGGCACTGTATTGCAA GACGAGTTTTCGCACCGATCCAGGGTGGGAGCAGCAGCAGCGAAGCAGAA ACGAGACACTACGAGATCTTGTTAGTCCCCCCACACAACCTTCGTAGCGG TTTGTCCTGCTTGTGCTC
back to top

Coding sequence (CDS) from alignment at Ecto-sp6_S_contig9:626985..630702+

>mRNA_Ecto-sp6_S_contig9.18055.1 ID=mRNA_Ecto-sp6_S_contig9.18055.1|Name=mRNA_Ecto-sp6_S_contig9.18055.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1341bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:626985..630702+ (Ectocarpus species6 EcLAC_371)
ATGGCTGAGGACTTGGCAAGCGCTACCCATGCTGTGGAAGCATTTCGGGA
GTTCCTCCGCATCCGCTCGGTCAGCGCAGAGGGTCCGCAAGGAGCCTACG
CGGAGGCGGCGAAGTGGGTCTCGGACTACGCTCGCGACCAAGCCGGGCTG
ACGTCCATCAAGACCGTCGAGTACTCGGCGGGGAAGCCGGTGGTGCTGAT
GGAGTGGCCGGGCTTGGAGCCAGACCTGCCCTGCGTGCTGCTCAACTCCC
ACTACGACGTCGTGCCCGCGATGCCGGAGCATTGGGACACAGACCCCTTC
GCGGCGGTGGTGAAGGACGAGGCCGGCGGCGGCCGCATCTACGGCCGCGG
CACGCAAGACATGAAGTGTGTGTGCGTGCAGTACCTCGTGGCGATCGCCC
GGCTTCGCCGGTCCGGGTTCCAACCGACCAGGACCGTGCACCTGAGCTTC
GTGCCCGACGAGGAGATCGGGGGCGCGGACGGCATCAGCCTGCTGCTCGC
CTCCGAGGAGTGGAAGGCCCTCGGGCCCGTGGGGATCGCGCTCGACGAAG
GGCTGGCCAACCCCAGGAACGCCTTCACCGTGTTCTACGGGGAGAGGACG
CCCTGGTGGCTGCTCGTGAAGGCGGAGGGGCCGACAGGCCATGGCAGCCG
GTTCATAAAGGACACCGCGGTGCAGAAGCTCATGGCCGTCTGCGACAAGG
CGCTGGCGTTCCGGAAGGAGCAGGAGGACGCGCTCGGGCACACCGGCGGC
TGCAGTCACGCTCGCGCCAAGAAGCTCGGCGACGTCACGACGCTCAACCT
CACCATGCTCAAGGCCGGGGTCGCCATGGCCGGAGGCGGCGACGGCGGCG
GGGCGGAGGCGGCGACCAAGCACGAGCGGTACGCTCTGAACGTCATCCCC
ACCGAGGCTCGGGCCGGGTTCGACGTGAGGATCGACCCCAATACCCCGAC
GGAGGACTTCAAGGCCCGCCTGGCCGGGTGGTGCAAGGAGGAAGGCGTGA
CGTGGGAGCTGGCCGACTGGACCACGCCGCTGCACGAGCACTACCTGACC
TCGGTGGACCGGGACGTTAACCCGTGGTGGGGGGTGTTCTTGGACACCAT
GAAAGACGTGGGCGTCGAGATAGAACCAGAGATATTCCCGGCGAGCACAG
ATAGCCGGTACCTGCGAGAGGTGGGCATCCCGGCCCTGGGCTTCTCCCCG
ATGAGAAATACGCCCATCCTGCTGCACGATCACAACGAGTACATCGCCCA
AGACGTCTTCATGGACGGAATAGAGGTGTACGAGCGCCTCATCACCGCGC
TAGCGTCTGCGGAACGACTACCCACGGAGGGGAAGCCGTGA
back to top