mRNA_Ecto-sp6_S_contig9.18022.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig9.18022.1
Unique NamemRNA_Ecto-sp6_S_contig9.18022.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
BLAST of mRNA_Ecto-sp6_S_contig9.18022.1 vs. uniprot
Match: A0A6H5JEL3_9PHAE (Pre-mRNA-processing factor 19 n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JEL3_9PHAE)

HSP 1 Score: 683 bits (1763), Expect = 3.210e-241
Identity = 433/447 (96.87%), Postives = 437/447 (97.76%), Query Frame = 1
Query:  502 GAYRGRPAGCA-IPGLLSFLQNEWDDLMLETHTLKQHLNQTRQELSQSLYQNDAACRVIARLHRERDEALAQVQAXXXXXXXXXXXXXXXXXXVEEMQTEDDGEEGISPAAHAQMQAKWKELSKRRKKRAMPDDLASQETVSAWGEVSRNTLHKTSPKGITCLDLHPSKPNLVLTGGVDKTAIVFDRDTQAQVATLSGHTKRITDACFHPTRELLLTSSTDKTARVWQAQAEGDGGGYKAAHVLDDHDGEVVGATVHATGDFMATASKDKSWAFYDINRGRLLKHVKNDEYSEGYNCVRFHPDGLILGTGTGDALVRIWDMKQAANVANFKGHEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKKCTKVFAVKTWGELATYGGYGGSVTGVKFGKSASFLATSSMDRTLRFYGTA 1839
            GA + RPA  A IPGLLSFLQNEWDDLMLET+TLKQHLNQTRQELSQSLYQNDAACRVIARLHRERDEALAQVQAXXXXXXXXXXXXXXXXXXVEEMQTEDDGEEGISP+ HAQMQAKWKELSK+RKKRAMPDDLASQETVSAWGEVSRNTLHKTSPKGITCLDLHPSKPNLVLTGGVDKTAIVFDRDTQAQVATLSGHTKRITDACFHPTRELLLTSS DKTARVWQAQAEGDGGGYKA HVLDDHDGEVVGATVHATGDFMATASKDKSWAFYDINRGRLLKHVKNDEYSEGYNCVRFHPDGLILGTGTGDALVRIWDMKQAANVANFKGHEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKK TKVFAVKTWGELATYG YGGSVTGVKFGKSASFLATSSMDRTLRFYGTA
Sbjct:   57 GAVKPRPAEAASIPGLLSFLQNEWDDLMLETYTLKQHLNQTRQELSQSLYQNDAACRVIARLHRERDEALAQVQAXXXXXXXXXXXXXXXXXXVEEMQTEDDGEEGISPSVHAQMQAKWKELSKKRKKRAMPDDLASQETVSAWGEVSRNTLHKTSPKGITCLDLHPSKPNLVLTGGVDKTAIVFDRDTQAQVATLSGHTKRITDACFHPTRELLLTSSADKTARVWQAQAEGDGGGYKAVHVLDDHDGEVVGATVHATGDFMATASKDKSWAFYDINRGRLLKHVKNDEYSEGYNCVRFHPDGLILGTGTGDALVRIWDMKQAANVANFKGHEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKKRTKVFAVKTWGELATYGDYGGSVTGVKFGKSASFLATSSMDRTLRFYGTA 503          
BLAST of mRNA_Ecto-sp6_S_contig9.18022.1 vs. uniprot
Match: A0A6V1T7M8_HETAK (Pre-mRNA-processing factor 19 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1T7M8_HETAK)

HSP 1 Score: 360 bits (924), Expect = 1.880e-114
Identity = 230/446 (51.57%), Postives = 288/446 (64.57%), Query Frame = 1
Query:  532 AIPGLLSFLQNEWDDLMLETHTLKQHLNQTRQELSQSLYQNDAACRVIARLHRERDEALAQVQAXXXXXXXXXXXXXXXXXXVE---EMQTEDDGEEGISPAAHAQMQAKWKELSKRRKKRAMPDDLASQETVSAWGEVSRNTLHKTSPKGITCLDLHPSKPNLVLTGGVDKTAIVFDRDTQAQVATLSGHTKRITDACFHP--TRELLLTSSTDKTARVWQAQAEGDGGGYKAAHVLDDHDGEVVGATVHATGDFMATASKDKSWAFYDINRG---RLLKHVKNDEYSEGYNCVRFHPDGLILGTGTGDALVRIWDMKQAANVANFKGHEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--GKKCTKVFAVKTWGELATYGGYGGSVTGVKFGKSASFLATSSMDRTLRFYGTA 1839
            +IPGLL+  QNEWDDLMLETHTLK HL+ TRQ+LSQ+LYQ+DAACRVIARL RERDE   Q+                         E+Q E+  EEGIS A  ++M  KWK+LSK RKKR +PD LAS ET+S W   + +T+HK+   GI CLDLHP+  ++VLTGG+DK A++F++ ++  VA LSGH K++T   FHP   R LL T+S DKTA++W +     G  Y+    L DH  EVVGA+VHATGDF+ATASKD++WAFYD+ +G     LK V++   + G+ CV FHPDGLILGTGT DAL+RIWDMK   NVA+F+GH G    XXXXXXXXXXXXXXXXXXXXXXXXX                                G    +++AVK W ELA  G +   VTGV+FG  A FLA++SMDR+L+ +  A
Sbjct:   68 SIPGLLNLFQNEWDDLMLETHTLKSHLDSTRQQLSQALYQHDAACRVIARLIRERDELKTQLTMYKQQIAEAAAATPQIEVTSAPSLEVQ-EEKQEEGISDAVLSKMTRKWKQLSKERKKRGIPDSLASAETLSKWAAKASHTVHKSDKPGILCLDLHPTDQDMVLTGGMDKEAVLFNKTSEQVVAKLSGHGKKVTTCSFHPHADRNLLFTTSADKTAKIWGSS----GDAYECRMTLADHTAEVVGASVHATGDFLATASKDRTWAFYDVAQGGAATCLKIVQDPTVAGGFECVSFHPDGLILGTGTSDALIRIWDMKTQTNVASFEGHTGAVHAXXXXXXXXXXXXXXXXXXXXXXXXXRLKNFHNLDAGGTGGVGVRTVAFDRAGAYLACGGADIRLYAVKEWNELAALGAHEKPVTGVRFGPDAGFLASTSMDRSLKIFTEA 508          
BLAST of mRNA_Ecto-sp6_S_contig9.18022.1 vs. uniprot
Match: A0A835YI40_9STRA (Pre-mRNA-processing factor 19 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YI40_9STRA)

HSP 1 Score: 323 bits (827), Expect = 4.610e-100
Identity = 216/451 (47.89%), Postives = 264/451 (58.54%), Query Frame = 1
Query:  511 RGRPA-GCAIPGLLSFLQNEWDDLMLETHTLKQHLNQTRQELSQSLYQNDAACRVIARLHRERDEALAQVQAXXXXXXXXXXXXXXXXXX----VEEMQTEDDGEEGISPAAHAQMQAKWKELSKRRKKRAMPDDLASQETVSAWGEVSRNTLHKTSPKGITCLDLHPSKPNLVLTGGVDKTAIVFDRDTQAQVATLSGHTKRITDACFHPTRELLLTSSTDKTARVWQAQAEGDGGGYKAAHVLDDHDGEVVGATVHATGDFMATASKDKSWAFYDINRGRLLKHVKNDEYSEGYNCVRFHPDGLILGTGTGDALVRIWDMKQAANVANFKGHEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKKCT---KVFAVKTWGELATYGGYGGSVTGVKFGKSASFLATSSMDRTLRFYGTA 1839
            R RPA   +IPGLL+ +QNEWDDLM+ET+TLKQHL+ TRQELSQ+LYQ DA+ RVIARL RERDEA  Q+QA        XXXXXXXXXX    VE    ED   + I+    +++   WK L+K RKKR +P DL S + ++ W E S  TLHKT+P GITCL L P   +L LTGGVDKTAI+F+R++  Q A LSGH+K++ D  F    E+LLT+S D TA+ W  +           H    H GEV     H TG + ATA +DK+W F+++  G  L+ VK + +  GY C R+HPDGLILGTGTGDA VRIWDMK   NVA+FKGHEGG               XXXXXXXXXXXXX                                      +V  VK W    T G +   +TGV F  SA  LA +SMDRTLRF+  A
Sbjct:   60 RPRPATATSIPGLLALMQNEWDDLMVETYTLKQHLDTTRQELSQALYQQDASARVIARLMRERDEARQQLQAQRAALAQAXXXXXXXXXXXXMEVEPAVVEDIPAK-IADTVMSELTNTWKALTKSRKKRVIPVDLVSADDMANWVEASSQTLHKTTPAGITCLALSPQDASLTLTGGVDKTAILFNRESGVQSALLSGHSKKVLDVAFGKGGEVLLTASADGTAKSWDLEG-------MLLHTFQGHKGEVTAICGHPTGRYAATAGRDKAWGFHELESGSCLRLVKEEGFEAGYECARWHPDGLILGTGTGDAQVRIWDMKTQNNVASFKGHEGGVVGSIAFSENGYYMAXXXXXXXXXXXXXRKLKNFHTLTLGSAAGTPVVVTFDHSGTYLAVSANTTIQVHVVKEWALATTLGQFKKPITGVAFAPSAKSLAATSMDRTLRFFEAA 502          
BLAST of mRNA_Ecto-sp6_S_contig9.18022.1 vs. uniprot
Match: B6TRQ7_MAIZE (Pre-mRNA-processing factor 19 n=13 Tax=Panicoideae TaxID=147369 RepID=B6TRQ7_MAIZE)

HSP 1 Score: 281 bits (720), Expect = 5.880e-84
Identity = 180/465 (38.71%), Postives = 233/465 (50.11%), Query Frame = 1
Query:  484 VPRNRRGAYRGRPAGCA-IPGLLSFLQNEWDDLMLETHTLKQHLNQTRQELSQSLYQNDAACRVIARLHRERDEA---LAQVQAXXXXXXXXXXXXXXXXXXVEEMQTE--DDGEE---GISPAAHAQMQAKWKELSKRRKKRAMPDDLASQETVSAWGEVSRNTLHKTSPKGITCLDLHPSKPNLVLTGGVDKTAIVFDRDTQAQVATLSGHTKRITDACFHPTRELLLTSSTDKTARVWQAQAEGDGGGYKAAHVLDDHDGEVVGATVHATGDFMATASKDKSWAFYDINRGRLLKHVKNDEYSEGYNCVRFHPDGLILGTGTGDALVRIWDMKQAANVANFKGHEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKKCTKVFAVKT----WGELATYGGYGGS--VTGVKFGKSASFLATSSMDRTLRFYG 1833
            VP N     + RP   A IPGLL   QNEWD LML    L+Q L+  RQELS +LYQ+DAACRVIARL +ERDEA   LAQ +                      M+ E   DG++   GI+P    ++      LS +RKKR +P  LA  + +  + ++S + LHKT+  GI  +D+HPSK ++V TGG+D  A++FDR +   + TL+GH+K+IT   F P  +L +T S DKT R+WQ   E + G Y   H L DH  EV   TVHAT  +  +ASKD SW FYDI+ G  L  V      EGY    FHPDGLILGTGT DA+V+IWD+K  +NVA F+GH G                                                           G    +V+ V      W  + T     G+  VT VKFG  A ++A  SMDR LR +G
Sbjct:   51 VPVNTNKVVKPRPLQAASIPGLLGIFQNEWDALMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARALLAQAERQIPASVAGAAPAAVVSNGKRAMEDEIGPDGKKIRPGINPVMIDELTECNTMLSAQRKKRQVPPTLAPLDALERYTQISSHPLHKTNKPGILSMDVHPSK-DVVATGGIDTNAVIFDRSSGQILCTLTGHSKKITTLKFVPRDQLFVTGSADKTVRIWQ---ENENGNYNCVHTLKDHTAEVEAVTVHATQKYFVSASKDNSWCFYDISTGSCLTQVGEASGQEGYTSASFHPDGLILGTGTTDAVVKIWDVKTQSNVAKFEGHVGPVTAMSFSENGYFLATAAHDGVKLWDLRKLRNFRTFSPYDSDTPTNTVEFDFSGNYLAIGGSDIRVYQVANVKAEWNLIKTLPDLSGTGKVTSVKFGADAKYIAVGSMDRNLRIFG 511          
BLAST of mRNA_Ecto-sp6_S_contig9.18022.1 vs. uniprot
Match: A0A1Y1HY70_KLENI (Pre-mRNA-processing factor 19 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HY70_KLENI)

HSP 1 Score: 281 bits (719), Expect = 7.610e-84
Identity = 174/455 (38.24%), Postives = 236/455 (51.87%), Query Frame = 1
Query:  523 AGCAIPGLLSFLQNEWDDLMLETHTLKQHLNQTRQELSQSLYQNDAACRVIARLHRERDEA---LAQVQAXXXXXXXXXXXXXXXXXXVEEMQTED-------DGEEGISPAAHAQMQAKWKELSKRRKKRAMPDDLASQETVSAWGEVSRNTLHKTSPKGITCLDLHPSKPNLVLTGGVDKTAIVFDRDTQAQVATLSGHTKRITDACFHPTRELLLTSSTDKTARVWQAQAEGDGGGYKAAHVLDDHDGEVVGATVHATGDFMATASKDKSWAFYDINRGRLLKHVKNDEYSEGYNCVRFHPDGLILGTGTGDALVRIWDMKQAANVANFKGHEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKKCTKVFAVKT----WGELATYGGYGGS--VTGVKFGKSASFLATSSMDRTLRFYGTA 1839
            +G +IPG+L+  QNEWD  +L T++L+Q L+  RQELS SLYQ+DAA RVIARL +ERDEA   LA+ +A                   +    E          + GI+    A+M A   ELS+ RKKR +P  LAS + +  + ++S + LHKT+  GI   D++  K + +LTGGVD   +VFDR      ATL+GHTK++    F P  +LLL++S+DKT RVW+   EG    Y+  HVL DH  +V   T+HAT  +  TAS DK+W FYD+  G  L  V +   ++GY C  FHPDGLILGTGT ++LVRIWD+K  ANVA F+GH G                                                           G    +++AV T    W  + T+    G+  +   KFGK AS+LA +SMDR LR +G A
Sbjct:   65 SGASIPGMLATFQNEWDAFVLSTYSLEQQLHTARQELSYSLYQHDAATRVIARLKKERDEARALLAETEARAAAAPAEVAPHRPDVANGKRAPEEHAEAAPTKKAKAGITQEIVAEMTACNVELSQSRKKRQIPATLASADALERYTQLSSHPLHKTAKPGIIACDINSDK-DWILTGGVDAQVVVFDRPAGQIKATLAGHTKKVNAVKFVPQTDLLLSASSDKTVRVWKGSDEGK---YQCVHVLTDHASDVRALTLHATNHYFVTASSDKTWGFYDLASGLCLTQVADPSVTDGYTCASFHPDGLILGTGTAESLVRIWDVKSQANVAKFEGHSGPVNAISFSENGYFLATAARDGVKLWDLRKLKNFRTFAPWDADTDCNTVEFDHSGSYLAAGGADVRIYAVGTVKQEWNTVKTFPDLSGTSKILNAKFGKDASYLAVTSMDRNLRVFGLA 515          
BLAST of mRNA_Ecto-sp6_S_contig9.18022.1 vs. uniprot
Match: A0A397UYM2_9GLOM (Pre-mRNA-processing factor 19 n=2 Tax=Gigaspora TaxID=4873 RepID=A0A397UYM2_9GLOM)

HSP 1 Score: 280 bits (717), Expect = 9.480e-84
Identity = 225/443 (50.79%), Postives = 287/443 (64.79%), Query Frame = 1
Query:  532 AIPGLLSFLQNEWDDLMLETHTLKQHLNQTRQELSQSLYQNDAACRVIARLHRERD---EALAQVQAXXXXXXXXXXXXXXXXXXVEEMQTEDDGEEGISPAAHAQMQAKWKELSKRRKKRAMPDDLASQETVSAWGEVSR-NTLHKTSPKGITCLDLHPSKPNLVLTGGVDKTAIVFDRDTQAQVATLSGHTKRITDACF-----HPTRELLLTSSTDKTARVWQAQAEGDGGGYKAAHVLDDHDGEVVGATVHATGDFMATASKDKSWAFYDINRGRLLKHVKNDEYSEGYNCVRFHPDGLILGTGTGDALVRIWDMKQAANVANFKGHEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKKCTKVFAVKTWGELATYGGYGGSVTGVKFGKSASFLATSSMDRTLRFYG 1833
            +IP LL+  QNEWD LMLET TLKQ   Q RQELS +LYQ DAACRVIARL +ERD   EALA VQA                     M+ E++ ++G++ A   ++      LSK RKKR  P +L   +T+  + ++S   +LH T+  GITC+DL  ++ NL+LTGG DK A +F+R+       L GHTK+ITD  +       + + + TSS DKT R+W+   +G    YKA  +L  H  EV G  VHAT D++ + S D +WAF+DI+  + L  V+++E  +GY+ V FHPDGLILGTGT D++VRIWD+K   NVA+F GH G      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G    +++  KTW ELAT     G VT +KFG+ A +L    +DR+LRF+G
Sbjct:   69 SIPSLLAVFQNEWDSLMLETFTLKQQYQQVRQELSHALYQYDAACRVIARLMKERDAAREALANVQAHIAVQPPSDAAVSEANA----MEVEEE-KKGVNDAVIEKLNETSANLSKGRKKRKAPPNLTPVDTIKEFEQISVVQSLHTTTNPGITCIDLDHTE-NLILTGGNDKKAQIFNRERNKVEFQLKGHTKKITDVLWLGRTDSDSGDTVFTSSADKTIRIWKPATKG----YKAESILSSHSSEVTGIAVHATKDYLVSVSNDSTWAFHDIDTAQTLVTVESNEVQDGYSTVEFHPDGLILGTGTNDSVVRIWDVKSQQNVASFTGHTGRVTSISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSD-VRIYQSKTWNELATIQENTGDVTDMKFGELAKYLVVGGLDRSLRFFG 500          
BLAST of mRNA_Ecto-sp6_S_contig9.18022.1 vs. uniprot
Match: UPI001425AA53 (pre-mRNA-processing factor 19-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI001425AA53)

HSP 1 Score: 280 bits (715), Expect = 1.770e-83
Identity = 201/444 (45.27%), Postives = 265/444 (59.68%), Query Frame = 1
Query:  520 PAGCAIPGLLSFLQNEWDDLMLETHTLKQHLNQTRQELSQSLYQNDAACRVIARLHRE---RDEALAQVQAXXXXXXXXXXXXXXXXXXVEEMQTEDDGEEGISPAAHAQMQAKWKELSKRRKKRA--MPDDLASQETVSAWG-EVSRNTLHKTSPKGITCLDLHPSKPNLVLTGGVDKTAIVFDRDTQAQVATLSGHTKRITDACFHPTRELLLTSSTDKTARVWQAQAEGDGGGYKAAHVLDDHDGEVVGATVHATGDFMATASKDKSWAFYDINRGRLLKHVKNDEYSEGYNCVRFHPDGLILGTGTGDALVRIWDMKQAANVANFKGHEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKKCTKVFAVKTWGELATYGGYGGSVTGVKFGKSASFLATSSMDRTLRFYG 1833
            P   +IP +L  LQ+EWD  ML + TL+Q L   RQELS +LYQ+DAACRVIARL +E     EALA ++                    E M+ E+ G  G+S     ++Q K   L+  RKKR   +P+DL   E + ++  + S   LH  S  GI  LD+  +  N VLTGG D+  +VF+++T+     L GHTK++T   +HP ++++ +SS D T RVW A A G       A  +  H+G V G ++HATGD+M + S+D+ WAF DIN GR+L  V +D       C +FHPDGLI GTGTGD++++IWD+K+  NVANF GH G      XXXXXXXXXXXXXXXXXXXXXXXXXXX                XXXXXXXXXX     +V+  K W ELA    + G  TGV+FG+ A FLA++ MDR+L+FYG
Sbjct:   66 PTATSIPAILKLLQDEWDACMLHSFTLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAAPGIAPIGSMVPPSQLAEPMEAEEAGMIGMSEEVIQKLQDKAALLTAERKKRGKKVPEDLMPAEEIRSFRVQSSHPGLHSASNPGILALDIQAANTNKVLTGGADRNVVVFNKETEQLETILKGHTKKVTHVIYHPNKDVVFSSSPDSTIRVW-AVASGT-----CAQTIRAHEGAVTGLSLHATGDYMLSCSEDRHWAFSDINVGRVLTKVSDDSIGHALTCAQFHPDGLIFGTGTGDSVIKIWDLKERTNVANFPGHSGPITAISXXXXXXXXXXXXXXXXXXXXXXXXXXXFKNITLDSHYEVKSLSXXXXXXXXXXXGSDVRVYLCKQWQELAVLTDHNGLATGVRFGQHAGFLASTGMDRSLKFYG 503          
BLAST of mRNA_Ecto-sp6_S_contig9.18022.1 vs. uniprot
Match: A0A1Y1Z4H6_9FUNG (Pre-mRNA-processing factor 19 n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Z4H6_9FUNG)

HSP 1 Score: 280 bits (715), Expect = 1.820e-83
Identity = 191/443 (43.12%), Postives = 248/443 (55.98%), Query Frame = 1
Query:  520 PAGCAIPGLLSFLQNEWDDLMLETHTLKQHLNQTRQELSQSLYQNDAACRVIARLHRERD---EALAQVQAXXXXXXXXXXXXXXXXXXVEEMQTEDDGEEGISPAAHAQMQAKWKELSKRRKKRAMPDDLASQETVSAWGEVSR-NTLHKTSPKGITCLDLHPSKPNLVLTGGVDKTAIVFDRDTQAQVATLSGHTKRITDACFHPTRE-LLLTSSTDKTARVWQAQAEGDGGGYKAAHVLDDHDGEVVGATVHATGDFMATASKDKSWAFYDINRGRLLKHVKNDEYSEGYNCVRFHPDGLILGTGTGDALVRIWDMKQAANVANFKGHEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKKCTKVFAVKTWGELATYGGYGGSVTGVKFGKSASFLATSSMDRTLRFYG 1833
            P   +IP +L+  QNEWD LMLET+TLKQ   Q RQELS +LYQ DAACRVIAR+ +ERD   EAL  ++A                     M T+   EEG++ A   ++    + LSK RKKR  P +L S + V ++ + S    LH ++  GITCLDL  +   LVLTGG DK A ++ +D +  VA L GHTKRITD  F      + LTSS DKT +VW+ +    G GY   + +D H+ EV   T+H + +F+ ++S+D +WAF+D+  GR L  V   +   GY+C +FHPDGLILGTGT D+ VRIWD+K  +NVA F GH G         XXXXXXXXXXXXXXXXXXXX                              G    +VF VK W ELA        V  + FG+ A FL +  MDR+LR++G
Sbjct:   66 PTMTSIPSMLASFQNEWDSLMLETYTLKQQYQQVRQELSHALYQQDAACRVIARVTKERDAAREALVNLRAHLDSHAQTAPDNGDVN-----MDTQ---EEGLTNAVIEKLTQTSQALSKTRKKRKAPAELTSVDAVRSYTQTSVVPALHSSTAPGITCLDLDATN-KLVLTGGHDKIAQIYKQDEEKTVAELKGHTKRITDVLFQGAESGVALTSSADKTVKVWKPE----GSGYACVNTIDAHESEVTSITLHPSKEFLVSSSQDSTWAFHDLGTGRTLSKVSTADVQTGYSCAQFHPDGLILGTGTNDSAVRIWDVKSQSNVATFAGHTGRVTSLSFSEXXXXXXXXXXXXXXXXXXXXKLVNFKTLELPQNNKVNVVNFDYSGQYLAVGGTDVRVFKVKEWDELAVLSDNTAEVNDLSFGEYARFLVSGGMDRSLRYFG 495          
BLAST of mRNA_Ecto-sp6_S_contig9.18022.1 vs. uniprot
Match: A0A7D9HB95_PARCT (Pre-mRNA-processing factor 19 n=3 Tax=Alcyonacea TaxID=40677 RepID=A0A7D9HB95_PARCT)

HSP 1 Score: 280 bits (715), Expect = 1.920e-83
Identity = 188/447 (42.06%), Postives = 258/447 (57.72%), Query Frame = 1
Query:  520 PAGCAIPGLLSFLQNEWDDLMLETHTLKQHLNQTRQELSQSLYQNDAACRVIARLHRE---RDEALAQVQAXXXXXXXXXXXXXXXXXXV---EEMQTEDDGEEGISPAAHAQMQAKWKELSKRRKKRA--MPDDLASQETVSAWGEVSRNT-LHKTSPKGITCLDLHPSKPNLVLTGGVDKTAIVFDRDTQAQVATLSGHTKRITDACFHPTRELLLTSSTDKTARVWQAQAEGDGGGYKAAHVLDDHDGEVVGATVHATGDFMATASKDKSWAFYDINRGRLL-KHVKNDEYSEGYNCVRFHPDGLILGTGTGDALVRIWDMKQAANVANFKGHEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKKCTKVFAVKTWGELATYGGYGGSVTGVKFGKSASFLATSSMDRTLRFY 1830
            P+  +IP +L  LQ+EWD  ML + +L+Q L   RQELS +LYQ+DAACRVIARL +E     EALA ++                   V   E M+ +DD E G++     ++Q K   L+  RKKR   +P+ LA+ + + ++ ++S +  LH  S  GI  LDLH +  + VLTGG+DK A+VF R+T+  VATL GH+K++T   +HPT ++  T+S D T RVW        G      ++  HD  V G ++HATGD++ + S D+ WAF DI  GR+L K V N   ++   C +FHPDGLI GTGT D++++IWD+K+ ANVANF GH G      XXXXXXXXXXXXXXXXXXXXXXX                                   +++ VK W  L T+  + G  TGVKFGK+A F+A++ MDR L+FY
Sbjct:   66 PSATSIPAILKSLQDEWDATMLHSFSLRQQLQTARQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAGIVAMAPTPVAPAIPNVNNEEPMEVKDDDEGGMTDDVLQKLQDKATTLTAERKKRGKKIPEGLATADDIQSYKQISSHLGLHSASNPGILALDLHAADTSRVLTGGLDKNAVVFHRETEQVVATLKGHSKKVTSVVYHPTEDVAFTASPDSTIRVWSV------GTASCTEIVKAHDAAVTGISLHATGDYLLSCSLDQHWAFSDIRTGRVLTKCVSNVSSTQALTCAQFHPDGLIFGTGTTDSVIKIWDLKERANVANFPGHSGPITSISXXXXXXXXXXXXXXXXXXXXXXXKLKNFKTIALEDRYEVKSLCFDQGGVYLAVAGSDVQIYMVKQWELLKTFTDHSGVATGVKFGKNAGFIASTGMDRNLKFY 506          
BLAST of mRNA_Ecto-sp6_S_contig9.18022.1 vs. uniprot
Match: D5A9Q1_PICSI (Pre-mRNA-processing factor 19 n=2 Tax=Picea sitchensis TaxID=3332 RepID=D5A9Q1_PICSI)

HSP 1 Score: 279 bits (713), Expect = 5.810e-83
Identity = 161/353 (45.61%), Postives = 202/353 (57.22%), Query Frame = 1
Query:  484 VPRNRRGAYRGRPAGCA-IPGLLSFLQNEWDDLMLETHTLKQHLNQTRQELSQSLYQNDAACRVIARLHRERDEA---LAQVQAXXXXXXXXXXXXXXXXXXVEEMQTEDDGE---------EGISPAAHAQMQAKWKELSKRRKKRAMPDDLASQETVSAWGEVSRNTLHKTSPKGITCLDLHPSKPNLVLTGGVDKTAIVFDRDTQAQVATLSGHTKRITDACFHPTRELLLTSSTDKTARVWQAQAEGDGGGYKAAHVLDDHDGEVVGATVHATGDFMATASKDKSWAFYDINRGRLLKHVKNDEYSEGYNCVRFHPDGLILGTGTGDALVRIWDMKQAANVANFKGHEG 1503
            VP     A + RP   A IPG+L   QNEWD +ML  + L+Q L+  RQELS +LYQ+DAACRVIARL +ERDEA   LAQ                       +   E D E         +GI+P    ++      LS +RKKR +   LA  E +  + ++S + LHKT+  GI C D+HPSK  L+ TGG D  A+VFDR     ++TLSGHTKR+T   F    +LLLT S DKT R+WQA  +G    Y   HVL DH  EV   TVHAT ++  TAS DK+W FYD++ G  L  V +    +GY    FHPDGLILGTGT ++LVRIWD+K  ANVA F GH G
Sbjct:   51 VPVKTPKAVKPRPLQAASIPGMLGLFQNEWDAVMLSNYALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARALLAQADRQIPMLPSNLAAVNASAVSNGKRDLERDDELPPPSKRIRQGITPEIIKELTDCNAMLSSQRKKRQISSTLAPVEALERYTQLSSHPLHKTNKPGILCADIHPSK-GLISTGGADANAVVFDRSAGQIISTLSGHTKRVTSVKFVARDDLLLTGSADKTVRIWQANEDG---AYNCRHVLKDHTAEVHAVTVHATNNYFVTASMDKTWCFYDLSSGLCLTQVNDPGIEDGYTSAAFHPDGLILGTGTTESLVRIWDVKTQANVAKFDGHSG 399          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18022.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JEL3_9PHAE3.210e-24196.87Pre-mRNA-processing factor 19 n=2 Tax=Ectocarpus T... [more]
A0A6V1T7M8_HETAK1.880e-11451.57Pre-mRNA-processing factor 19 n=1 Tax=Heterosigma ... [more]
A0A835YI40_9STRA4.610e-10047.89Pre-mRNA-processing factor 19 n=1 Tax=Tribonema mi... [more]
B6TRQ7_MAIZE5.880e-8438.71Pre-mRNA-processing factor 19 n=13 Tax=Panicoideae... [more]
A0A1Y1HY70_KLENI7.610e-8438.24Pre-mRNA-processing factor 19 n=1 Tax=Klebsormidiu... [more]
A0A397UYM2_9GLOM9.480e-8450.79Pre-mRNA-processing factor 19 n=2 Tax=Gigaspora Ta... [more]
UPI001425AA531.770e-8345.27pre-mRNA-processing factor 19-like n=1 Tax=Anneiss... [more]
A0A1Y1Z4H6_9FUNG1.820e-8343.12Pre-mRNA-processing factor 19 n=1 Tax=Basidiobolus... [more]
A0A7D9HB95_PARCT1.920e-8342.06Pre-mRNA-processing factor 19 n=3 Tax=Alcyonacea T... [more]
D5A9Q1_PICSI5.810e-8345.61Pre-mRNA-processing factor 19 n=2 Tax=Picea sitche... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig9contigEcto-sp6_S_contig9:352586..361264 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score680.2
Seed ortholog evalue8.7e-193
Seed eggNOG ortholog2880.D7G8G6
Preferred namePRPF19
Model size1842
KEGG koko:K10599,ko:K14808,ko:K20368
KEGG TC8.A.61
KEGG Pathwayko03040,ko04120,map03040,map04120
KEGG ModuleM00353,M00355
Hectar predicted targeting categoryother localisation
GOsGO:0000075,GO:0000077,GO:0000151,GO:0000209,GO:0000244,GO:0000245,GO:0000349,GO:0000375,GO:0000377,GO:0000381,GO:0000387,GO:0000393,GO:0000398,GO:0000726,GO:0000974,GO:0001701,GO:0001824,GO:0001832,GO:0001833,GO:0003674,GO:0003824,GO:0004842,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005684,GO:0005694,GO:0005730,GO:0005737,GO:0005811,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006283,GO:0006289,GO:0006302,GO:0006303,GO:0006325,GO:0006396,GO:0006397,GO:0006464,GO:0006508,GO:0006629,GO:0006725,GO:0006807,GO:0006950,GO:0006952,GO:0006974,GO:0006996,GO:0007154,GO:0007165,GO:0007275,GO:0007399,GO:0008104,GO:0008150,GO:0008152,GO:0008283,GO:0008380,GO:0008610,GO:0009056,GO:0009057,GO:0009058,GO:0009507,GO:0009536,GO:0009605,GO:0009607,GO:0009617,GO:0009790,GO:0009792,GO:0009893,GO:0009987,GO:0010035,GO:0010038,GO:0010467,GO:0010468,GO:0010498,GO:0010604,GO:0010628,GO:0010720,GO:0010721,GO:0014013,GO:0014015,GO:0016043,GO:0016070,GO:0016071,GO:0016567,GO:0016604,GO:0016607,GO:0016740,GO:0019219,GO:0019222,GO:0019538,GO:0019787,GO:0022008,GO:0022607,GO:0022613,GO:0022618,GO:0023052,GO:0030154,GO:0030163,GO:0030312,GO:0031323,GO:0031325,GO:0031461,GO:0031570,GO:0031974,GO:0031981,GO:0032446,GO:0032501,GO:0032502,GO:0032991,GO:0033036,GO:0033120,GO:0033554,GO:0034450,GO:0034613,GO:0034622,GO:0034641,GO:0035556,GO:0035861,GO:0036211,GO:0040007,GO:0042221,GO:0042742,GO:0042770,GO:0042802,GO:0043009,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043484,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0045595,GO:0045596,GO:0045597,GO:0045664,GO:0045665,GO:0045666,GO:0045685,GO:0045687,GO:0045786,GO:0045935,GO:0046483,GO:0046686,GO:0048024,GO:0048026,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048589,GO:0048699,GO:0048710,GO:0048711,GO:0048731,GO:0048856,GO:0048869,GO:0050684,GO:0050685,GO:0050767,GO:0050768,GO:0050769,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051093,GO:0051094,GO:0051171,GO:0051173,GO:0051179,GO:0051239,GO:0051240,GO:0051241,GO:0051252,GO:0051254,GO:0051276,GO:0051603,GO:0051641,GO:0051704,GO:0051707,GO:0051716,GO:0051726,GO:0051960,GO:0051961,GO:0051962,GO:0060255,GO:0060284,GO:0061630,GO:0061659,GO:0065003,GO:0065007,GO:0070013,GO:0070534,GO:0070647,GO:0070727,GO:0071006,GO:0071007,GO:0071012,GO:0071013,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0072395,GO:0072401,GO:0072422,GO:0080008,GO:0080090,GO:0090304,GO:0090734,GO:0098542,GO:0140096,GO:1901360,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1902494,GO:1903311,GO:1903313,GO:1990234,GO:1990904,GO:2000026
Exons14
EggNOG free text desc.generation of catalytic spliceosome for first transesterification step
EggNOG OGsKOG0289@1,KOG0289@2759
Ec32 ortholog descriptionWD40 repeat
Ec32 orthologEc-14_002950.1
EC2.3.2.27,3.6.4.13
Cds size1842
COG Functional cat.DK
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko02000,ko03009,ko03041,ko03400,ko04121,ko04131
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350519.2045317-CDS-Ecto-sp6_S_contig9:352585..3527961682350519.2045317-CDS-Ecto-sp6_S_contig9:352585..352796Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 352586..352796 +
1682350519.221509-CDS-Ecto-sp6_S_contig9:354313..3544881682350519.221509-CDS-Ecto-sp6_S_contig9:354313..354488Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 354314..354488 +
1682350519.2372272-CDS-Ecto-sp6_S_contig9:355208..3553061682350519.2372272-CDS-Ecto-sp6_S_contig9:355208..355306Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 355209..355306 +
1682350519.2471716-CDS-Ecto-sp6_S_contig9:355667..3557201682350519.2471716-CDS-Ecto-sp6_S_contig9:355667..355720Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 355668..355720 +
1682350519.2636998-CDS-Ecto-sp6_S_contig9:355763..3557871682350519.2636998-CDS-Ecto-sp6_S_contig9:355763..355787Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 355764..355787 +
1682350519.2721512-CDS-Ecto-sp6_S_contig9:356304..3563941682350519.2721512-CDS-Ecto-sp6_S_contig9:356304..356394Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 356305..356394 +
1682350519.2798395-CDS-Ecto-sp6_S_contig9:356845..3569781682350519.2798395-CDS-Ecto-sp6_S_contig9:356845..356978Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 356846..356978 +
1682350519.2878273-CDS-Ecto-sp6_S_contig9:357782..3578731682350519.2878273-CDS-Ecto-sp6_S_contig9:357782..357873Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 357783..357873 +
1682350519.295827-CDS-Ecto-sp6_S_contig9:358215..3583541682350519.295827-CDS-Ecto-sp6_S_contig9:358215..358354Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 358216..358354 +
1682350519.3034513-CDS-Ecto-sp6_S_contig9:358770..3590901682350519.3034513-CDS-Ecto-sp6_S_contig9:358770..359090Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 358771..359090 +
1682350519.3112812-CDS-Ecto-sp6_S_contig9:359543..3596791682350519.3112812-CDS-Ecto-sp6_S_contig9:359543..359679Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 359544..359679 +
1682350519.3190694-CDS-Ecto-sp6_S_contig9:359910..3601381682350519.3190694-CDS-Ecto-sp6_S_contig9:359910..360138Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 359911..360138 +
1682350519.3269782-CDS-Ecto-sp6_S_contig9:360579..3606751682350519.3269782-CDS-Ecto-sp6_S_contig9:360579..360675Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 360580..360675 +
1682350519.3348143-CDS-Ecto-sp6_S_contig9:361216..3612641682350519.3348143-CDS-Ecto-sp6_S_contig9:361216..361264Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 361217..361264 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig9.18022.1prot_Ecto-sp6_S_contig9.18022.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig9 352586..361264 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig9.18022.1

>prot_Ecto-sp6_S_contig9.18022.1 ID=prot_Ecto-sp6_S_contig9.18022.1|Name=mRNA_Ecto-sp6_S_contig9.18022.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=614bp
MIAQLAAGVRCTAAPGASQQSERGAWAPPPSPETVKGSVRVPPSKEHLPS
CRGFPPFASTPTARPSGYPSEKKKKEKTGEGDKAAARHALDAQPLVSLTW
RRVGERERETRAATACGLGRDSRYHAVRNLGTDAGDPGGVEEVGARLRET
AHRQVHRCRGKVPRNRRGAYRGRPAGCAIPGLLSFLQNEWDDLMLETHTL
KQHLNQTRQELSQSLYQNDAACRVIARLHRERDEALAQVQAQRTALAQAQ
AAAPAAAAAVEEMQTEDDGEEGISPAAHAQMQAKWKELSKRRKKRAMPDD
LASQETVSAWGEVSRNTLHKTSPKGITCLDLHPSKPNLVLTGGVDKTAIV
FDRDTQAQVATLSGHTKRITDACFHPTRELLLTSSTDKTARVWQAQAEGD
GGGYKAAHVLDDHDGEVVGATVHATGDFMATASKDKSWAFYDINRGRLLK
HVKNDEYSEGYNCVRFHPDGLILGTGTGDALVRIWDMKQAANVANFKGHE
GGVNALAFSENGYYMASAGEDGYARLWDLRKLTNFDNLTIGDGAAHSVAF
DFSGSYLAAGGKKCTKVFAVKTWGELATYGGYGGSVTGVKFGKSASFLAT
SSMDRTLRFYGTA*
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mRNA from alignment at Ecto-sp6_S_contig9:352586..361264+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig9.18022.1 ID=mRNA_Ecto-sp6_S_contig9.18022.1|Name=mRNA_Ecto-sp6_S_contig9.18022.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=8679bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:352586..361264+ (Ectocarpus species6 EcLAC_371)
ATGATAGCGCAACTTGCCGCAGGGGTGCGATGCACAGCCGCCCCCGGCGC TTCTCAGCAGTCAGAGAGGGGGGCTTGGGCACCCCCCCCATCTCCCGAGA CTGTTAAAGGTTCAGTTCGTGTGCCCCCCTCGAAAGAGCACCTGCCGTCC TGCCGCGGCTTCCCTCCTTTTGCGTCCACGCCAACAGCACGTCCGTCGGG ATACCCATCAGGTAAGGCAGTACAAGACTTTGGCGGGTGTGTCCTTTGCC AAGCGTTGGCGTTGCGGGATCCACCGACCGGAAATGCGGAAGCCCCGTCG TGTTGTTTTCGCGCCCAGCAGTTAGCAAAGGCGGAACTTGTGGCCTGGCC TGCCTCGTCTTTTACGGATTTGCTGCGGATTCGGCCGTGTCCCTGATAAG AGCATCGGTGATCTGCAGCCAAGTACTTGCAAACGAAACTACCCTGCTCC ACGCATCCCGACGATCACTCTTCTCTCTCGCCCTTGGCTCGCAAGAGGAA TGCGACGCAATACCGTATACCGAACTCATGTGCGACGTTGTTTTTCAATT TTTCCAATCCGCGGATGGCGCCCTCTTGACACTTGGAAGACCTACCGTCA ATCCACCCCCTCGGGCTGCTGTAGCGTGCGCTAGGCTACACCCATGTACG TCCGTGCTGTGCGTCTGCCAGCACCTCGGGGGTTAGTGATACAGCCGGCA TTCTAGCTAGGTGGTTTATGACCAGCATCTACAGCCGAAGTATGTATAAC GATCGATTTGTGTAGTCGCTAGACTCGCACCGCAGTCCCACGAAACACGC CACCGCTGTTGGGCTTTGCGCCTGCGAGCAAACAAGGCAACTAATCCGTA AGATGCTGAGCAGTGTCAGATGGCAGCGTGTAATGTGCTACTCACCACTG TCCCCGCCCAACACTAGCGCTGCTGCTGAATCAGCCCCCCCCCCTCCCCC CCCTAAAAATAAAATAAAGTCTTGCTGCCCCTGTGCGAGCACGCATTGAG GCATGGAGGCTTACTGCTGTAAATATGTTTCTCTCCATCATACTTGTACA TACAACACCCGTTATGAGACAGCGGGAGCGCATTGTAGGTCGGTACAGAC AGATTCACCCAGCACGCCGGCTTCCAAATTGGTGGCACACTAGAAGTTTC CACGCTGTCTTTTTTTCGTTTCGAGCGAGCTTGCGAGTTTTCCACGGCGG CATTGTTCGCAGCATGCATTTTGACGCGTTTTCTACCTCCCGGCCCCATC ATAGGATGAGACGATACCGATAAAGAGGCCGGCTCTCTTCCTTTGTCTGA CGAAGTGTGGTTGTGTATGTGATTCATGTCTTGGGAACCAACCAGCCTTG TCGTCTTGTCGCGGGAGTTCCGGACGTGGTGCCGCACTCATCACGAGAGA GAGAAAGAGGGGCGGCATGGTAACCTATCGCGTGACGTGGCATCTAGTGC ACTGCGAGGCGACGGCAACTAAACAGCAGTCAGGGTATTAAACACGAGCG TCATCCTATGCGCCTTTGATGGCAGCTGGGTGGGGATTGGGGTTTTGAGG TCAAGTCCCCACGACACAGCAGTAGCGACGACGACCAACAAACACATTTT TTGTTTCCAGTTTTTAATTGCCGTGCAGTGCGTCGATGCTGGCGTGCTAT TTATGCTATGATGCTTTCTAGGTCGAACAACTTATTGTTCGTCCGTTCCC CATCCCTTCACGATGTCGCCGCGTGCAGAAAAGAAAAAGAAGGAGAAAAC CGGAGAGGGCGACAAAGCAGCGGCGCGGCACGCATTGGACGCGCAACCTT TAGTTTCGCTTACTTGGAGACGAGTGGGGGAGAGGGAGAGGGAGACGCGC GCCGCCACAGCTTGTGGTTTGGGGAGAGACAGTCGCTACCATGCAGTGCG CAAGTGAGAGCCGATCGTGTGTCGTCCTGTTTTGATCCCTGCGTGTAAAT CTGCTGCAAGGGCGCGCGCGCGGGGGGGGTGGGGTGGGGGGGGTAGGGCT AGCCGAGAGAGCCAGTATTTTGCCACAGAACGAACATCACTGTACTCGTA CGGCAAGGCGTTGGTCTTGCTTTTCGTTTTCCACAACACGACAACTTCGA TGGAGGGACCAGCTGCATGCAGCGAGCAGGTGTAGCGTTTATACAAGGTT AAGTTGCGCGGTATCTGCCATCGCCGAAGAGGGGGGAGTTCCGCGTACGA ACGTGCGCATGCTGGGTTTTTTATCACCTTGCTATCCCCCCCCCCATTCG CGCTCCTTGCTGCGCCCGAAGCAAGCGGGTGCGGACGTTCGGACAAATCG CTAAGGAAAACTGATCTGCGTCGGGACGCATCATAACGGGGTTGAGTTCC GCGCTTTTGTTGCGGCCGCGCCAACAGCAGGGCGAGGCTTGGTGCTATCA CCACCAGAGCTGCGTGCTTCCTCAACGCAATACGGTAGCTGATGCCCTCA ATCACTATTCCCTGTGAAGGCGCGACAGACACTCCCCTGACAGATGTTCT CTCTGTGTCTTGTCTTTGTCTCGCTGCCCCTGGTTCCGTCACCGATGCGG GCGACGGTTGTACCGGCGGCGCGGTCTCTCTGCGTTTGCTTTTTCATTTG CTGCTGCTTGCGTGGTGGGGAAGTCTCGGGACAGACGCCGGAGACCCCGG TGGTGTCGAAGAAGTCGGGGCACGTCTACGAGAAACGGCTCATCGTCAAG TACATCGATGCCGAGGGAAAGGTGACACAAGAGAGACTGGTCTTAGGAGC GGGGAGCGGTCTGTCTGCAATCTCCTTCGGTGTGTGGGGGGGGGGGGGGC TGGGGAGCTGCTCGTACGACATGCTCCCATCGGCTCGCCCTCCGCGTGGA AGCACAGCGACTTGCGACTTGTTATGGGACGGGAAACGTTCTCTTTTGCG AGAAAATAGGCAGACTTTACATTGAGAACTCCACCTCGCCTTCTCTAGGG GGGCGGCCCGACTGACGTGCGTTGCGCTAAAATCAATTCGATTTTCATGT CACCCTTCTTGCTTGGTGAAACACGGGACGTCGGTTATTTTTGAACTAAT GGTGGCGTACGCGTGTACGTATATGACGGCAGTGCCCCGCAACCGGCGAG GAGCTTACCGCGGACGACCTGCTGGATGTGCGATCGGAGGGGGCCGTCAA GCCAAGGCCCGCCGAGGCTGCCTCTATTCCCGGCCTCTTGTCTTTCCTGC AGGTGAGAAGAGAGGAGATCCTTGTACAAGATGTGGCAGAGGGGGGGGGT GCAAGAGGGAAAAGGGGGGGAGGGGTACTCATGTTTTGCATTCCTTGGCT GACCAAAGGGGGAGTGGGGATGGGGAGTCAATGTGTGCGTGAATTCACTC CTGTTGTCTGTGCATGTGCGTGTTTTGGAAGATTTGTGTAGAGCGTATGG TACAAATAAATCTAGGTAGACTCACGGGGTGTGTTTGGTTTGTTGTGTTG CAACGTGTGTGTTGGGGTGGTACGGTTGTGGGGACGCAAAATGTAAGAGC AGTTGTTGTCGAGATTGTTGAACGGAAATCGGGATGATGGAGGATCTCTG TCTTGTCTCTCACGTCTTCATTCTCTCATGCCCCATCGTGGTGTACTCGT CGAAAAGGTGCGGTGCAGTCCATGGTGCTGAAGCTCTTCCTCGGCCAGCA TTTTGAGCTAACAATCGAAACCAAGCTTCGCCCCCCCCCCCTCTCTCCCC CCCCGTTGATTGCACTCAGAACGAGTGGGACGACCTGATGCTTGAGACGC ACACCCTGAAGCAGCACCTCAATCAGACGAGGCAGGAGCTCAGCCAATCG TTGTACCAGGTGAGCAAAAATGAAGATTTCGAGGGAGCGAGGGCGTGACG GAGACAGGGACTAAAAGGGGAAAGGATAACACAGGGAGAAGGAGGTGTTA AGGCCCACGAGGGATGAAGTTGTCGTCTTTGTGGAATCGAAGTAGAGAAC GAGCGCTagcgAGAGAGAGAGAGAGAAATTCTGGTTTTGGTACGTAGCAC CCCCAAGGCCTGCTTTTCACGCAGGGGGGGCGGGATGGACGAATACCCCC CGCCCCGCTGCACTGCACTGCGGCACGGTGGTAGAAGGCAGGTTCACTAG CGACTTTTAAAATGTACTTCAGGTTGACGCCACTCCCGTTTTCCGCGATC TTTTTCCCCATGTTAAACAATTTTCGGTGAACCTCGCCGCACTTGTTTGT TGTTCCGACGCCCGCGTGGGCAACGTCCGACAATACCCTCACGCACACAT TTCTTGGAAGAACGACGCGGCGTGTCGGGTGATCGCACGTCTGCATCGCG AAAGGGACGAAGCGCTGGCGCAGGTGCAGGCACAGAGGACCGCTCTGGCG CAGGCGCAGGCGGCAGCCCCGGCAGCGGCGGCGGCGGTGGAAGGTGGGGT CTAGGGGGGGGGGGGGCCGTTGTGTGTGGACCGTTGTTGTTGTGAGGTGT TGTTGGCGCTGGTGGTGCTGTTGTTTGCGGCGGCCGCGGCGGCCGGGGTT GCGATTTTCAAGATTGGGCGGGATGTCGGTATGCATCGGTAGCTGAAATT GCCTTGTCTTGGTGTTGGAGTTGTTGTTGCTACCGCTTTGGCGGCCGGCC TGCCCGGTAGCGGCGCTGCCACCGTGCGCTGCTGCCGTTATGATCTCACT TTTAGTTGGTGGTGGTGGTGGTAGCGGTGTGGCGTGATAGCAGGCGTGGT CGCTCACGTCCTTGAGTGATGGGGGCAGTATCACCGTCAGTCACACGAGG CAGGCAACCATTGCATTCTTTGTAGCACTCCTCCCGCATTCTTGCCCCCC CCGGGCACTAGAGGCATGCCCTCGCCCTCTGCCCTGCTTATTGTAGTGTT GGTGGCGCACCGTTGTTTTGTGACCCGGCAACCTTTGCCTCGCGAGCTTG TACATGTACTCTACCGCCCGTAGCCGAACAGGAACAGCTGCCGCGCAAGC GTGGCTAGCTTCGTGATGAACGTCATGACACAGTTTATTTTTCAAGGACT CTTGTGTTCTGATATATATTTCGTGATGATGCATTTTCCTCTTTAGGGTG TGTTCTATTGCCACACAAGTCTCTTCTCTCCCCCTTACCCACCCCCACCC CCACCCCCCGCCACTCTCTATAACCTCGAACGGCCGCACCGACCAACGGC TTCCTGTCTCCCTCCCTCCCTTCCTTCCCTCCTCCCATGCCTTGCAGAGA TGCAGACGGAGGATGACGGGGAGGAGGGAATCTCGCCCGCCGCGCACGCG CAGATGCAGGCGAAGTGGAAGGAGCTCTCCAAGAGGAGGTGAGCGCGGTC GACGCCCAAGGGCGCGCGCCAAGCGCTGCGCGGCCGCCGCCGCTGCCGCT TTCCAAGTCGTACTTGGTTCCTTGCGGCCATGTCGTGCCCTGTGTGTGTT GGTGGAGCGTTTTTTGTTGTGCTCTGGCTTCGCGTGAATGCAACAAGTAT TTCTTCGTGTGTGATTGCTGATATGCACACAACCTTGTTTGTGGCTGGTG CTGGTGCTGTTGTCGTTGCTGCCGCTGCTGCTGCTGCTGTTGGTGTTGGG TGTTTGTTTTGTGGCTGGTTACAGAAACACAGACGCAGACACACTCCCTC CCCCCTCGCCTTGAACAAAAACAACACCAGGAAGAAGAGGGCCATGCCGG ACGACCTGGCCTCTCAGGAGACCGTGTCGGCGTGGGGCGAGGTGTCGAGG AACACCCTCCACAAGACAAGCCCCAAGGGCATCACGTGCCTCGACCTCCA CCCGTCCAAGCCGAACTTGGTGAGAGTTAATGGCACGCTCCGCTGCCACT CCTGCTGCTGCCGTTTGCTGCTGTTTGCTGCTGTACTGCGGTTAACTGCT GTAGCTGCCGTTTGGTGGTGTACCGTGCATGTCTTTGAGCTCTCACTCCT TGCCGAAGGCTGTTGCAGCGTACATGTAGGTGTCCAACGACAGCAGCGGT GCAATAGTATTCGATGAACAACTTGGCGTCTTATTGTGTGAATGGAGGGT CGCTCGGCGCTGTTTTTTTCTATGGAATCGAGTCTCCTCGTCAGCATTTA ACAATTGTACCCGGCAGGCAAAAATCTTGGGGCGCCTCGACAGTAAAACG CATCCCCGCTCCAACGAAAAGCTTTGTGCTGTTTTGCGACCGACCACGCA TGTAAAACTCGCGCACGCACCTACCGCGCGAACAGGTGCTCACCGGCGGT GTGGACAAGACGGCCATCGTCTTCGACCGGGACACGCAGGCGCAGGTGGC GACGCTCTCTGGCCACACCAAGAGAATCACGGACGCGTGCTTCCACCCCA CTCGGGAGCTGCTGCTCACGTCCTCGACGGACAAGACCGCCCGCGTGTGG CAGGCCCAGGCGGAAGGGGACGGGGGCGGGTACAAGGCTGCCCACGTGCT GGACGACCACGACGGGGAGGTGGTGGGCGCCACGGTGCACGCCACGGGAG ACTTCATGGCCACGGCGTCGAAGGACAAGAGCTGGGCGTTCTACGACATC AACAGGTGCGTGGTGACGCGGGTGTGCGGTGTGCGGTGTGCGTTGGTGGT GTGCTGGTGTGGTGATGAAAAAAGTGTTCGCTGTAGTTGCTACGGGGAGC GGTGCGGCTCTGTTTGTTTTGCGCTGCTGCGGCCGCTGCGATTTCCTCCT CGACAGGCGTGTGCTTGTACATGTGGTGTGGACCACGTGTTCTACGTGCG CTCCCCTCACCGCCTGCTGCGGAAACGCTCGAAGTACACCCTTCCTTTTT CCCGCGGCGTCTCTCCCTTCTAACCCCCACCATCCCATTCGCGTGCCTCT TTCTCGGCTGTGCGGCCGTCCACCCGTGTGCCTCGATCGTCTCACTCCGG ATAATCACCCGCCGCGGCCTACCTTGCTCCAACGACGTGACTCTATTGGC AACCTCTGCAATCCTCGACCAACCAAAACTGAACAAAATAAAATAAAAAA ATGAAAAGGGGGAGGTTGTTGAAGCACGTCAAGAACGACGAGTACTCCGA AGGGTACAACTGCGTCCGCTTCCACCCGGACGGTCTCATCCTGGGTACCG GAACTGGCGACGCGCTCGTGCGCATCTGGGACATGAAGCAGGCGGTAAGA ATTGTTTCTGTACATATGCGGCGTGTTTCGAGTGGTGCGGTCGGGCGCGG TAGGTAATAGTTGTCCCGCGTTTTTAACGCTGCCGATAGTGCTGTAGGCC GGTCGTACGGCTTCCCGTCTTTGCTGTGGAGGTCTGACTTGTGCCACCAG TAGGCGACCCTGCTGATCCTCCTTCACCCTCGGCGCTGCGCCCCCCCCCC CCCTCCCGTCCGTCCGCTCAAAAAGGCCAACGTGGCCAACTTCAAGGGCC ACGAGGGAGGGGTGAACGCTCTGGCCTTCAGCGAGAACGGTTACTACATG GCCTCGGCGGGCGAGGACGGCTACGCGCGCCTGTGGGACCTCCGCAAGCT CACCAACTTCGACAACCTGACCATCGGCGACGGGGCGGCGCACTCGGTAG CGTTCGACTTCTCGGGGTCCTACCTCGCGGCGGGCGGGAAGAAGTGCACT AAGGTAAGGGGGAGGCGGGGGGGGGATTGTTGGCAGGCAATTGACGTCAA GGTGGTTTACCGCATGTTGGTTACGTAGGATGTGGGTGGCGTGCGCGGTT AGAAAAACGCTTGTCGTGGGGTGTGTGTTATTGGAATGTGCGCGTTTTTT TTTGTGTGTGGTCTGATGGAAATGGATGGATGCCGACGTGATATGTATTT TTCTCTCTCTCTTGATACAGCTGTTTCTGTGTAAGGCATGCGCCACACGA CGCATGTTCATATGTGAAGCTCGGTTGGTTTTCCTCGGCGTACGCTTTGG CGAGCGATCCGCTCTGCTGCCATCTTGGCGCTCCGAAAGCCTCACACGCA TCTACTTCCAGCTAATAGACAAATCGCACACTCAAGTGTACCCCATGCCG TGTCCTGACATCTGGCGTCGTCGTCGTGCCATGGAACGTTCCAGGTGTTT GCGGTCAAGACGTGGGGAGAGCTGGCTACTTACGGCGGCTACGGCGGGTC AGTGACGGGCGTCAAGTTCGGCAAAAGCGCGAGCTTCTTGGTAAGACAAT CCGGACGCCAACGTGTCGTCAATTTACCACGCGTCATCCATCTGCTGCCC ACACAAAACGATTTTTATCCACCGCTGTTGTGGTGATGCAAACAACACGC CTCGCTACAACGAGAGATGGGTATAGCAGAGTGGGCGTCAATAGTAGTTG TCACTCCGTTGTATTTTTCTTGTTCGAAAGGAATGTAACGAGGGATGACT TGCAGCGTACGTGCTATTAGTAGTATATTATAGTTTTCACTGTTTCCCCT CGGTCGTTGTTTTTTTCTTAGTTCGAAAGGGTGTTACGAGGGATGACTTG CAGAGTGGGTGCCAGTGGCAGTTTTCATTCCGTTGTTTTTCTCTTGTGCG ACAGGATGTTTCGAGGGAGGGTTGCTGAGTACGCGCCATTAGTAGTTCTC ACTATTTGCCCTTGGTCGTTGTTTTTTTCTTCATTCGAAAAAGTGTCACG AGGAATGACTTGCAGAGTGGGTGCCAGTAGTCGTTCTCACTCGTTTCCCT TCGTTGTTGTTGTTTTTTTCCTGTTGGACAGGCCACATCCTCGATGGACA GGACGCTGCGTTTCTACGGCACCGCGTAA
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig9:352586..361264+

>mRNA_Ecto-sp6_S_contig9.18022.1 ID=mRNA_Ecto-sp6_S_contig9.18022.1|Name=mRNA_Ecto-sp6_S_contig9.18022.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1842bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:352586..361264+ (Ectocarpus species6 EcLAC_371)
ATGATAGCGCAACTTGCCGCAGGGGTGCGATGCACAGCCGCCCCCGGCGC
TTCTCAGCAGTCAGAGAGGGGGGCTTGGGCACCCCCCCCATCTCCCGAGA
CTGTTAAAGGTTCAGTTCGTGTGCCCCCCTCGAAAGAGCACCTGCCGTCC
TGCCGCGGCTTCCCTCCTTTTGCGTCCACGCCAACAGCACGTCCGTCGGG
ATACCCATCAGAAAAGAAAAAGAAGGAGAAAACCGGAGAGGGCGACAAAG
CAGCGGCGCGGCACGCATTGGACGCGCAACCTTTAGTTTCGCTTACTTGG
AGACGAGTGGGGGAGAGGGAGAGGGAGACGCGCGCCGCCACAGCTTGTGG
TTTGGGGAGAGACAGTCGCTACCATGCAGTGCGCAATCTCGGGACAGACG
CCGGAGACCCCGGTGGTGTCGAAGAAGTCGGGGCACGTCTACGAGAAACG
GCTCATCGTCAAGTACATCGATGCCGAGGGAAAGTGCCCCGCAACCGGCG
AGGAGCTTACCGCGGACGACCTGCTGGATGTGCGATCCCCGGCCTCTTGT
CTTTCCTGCAGAACGAGTGGGACGACCTGATGCTTGAGACGCACACCCTG
AAGCAGCACCTCAATCAGACGAGGCAGGAGCTCAGCCAATCGTTGTACCA
GAACGACGCGGCGTGTCGGGTGATCGCACGTCTGCATCGCGAAAGGGACG
AAGCGCTGGCGCAGGTGCAGGCACAGAGGACCGCTCTGGCGCAGGCGCAG
GCGGCAGCCCCGGCAGCGGCGGCGGCGGTGGAAGAGATGCAGACGGAGGA
TGACGGGGAGGAGGGAATCTCGCCCGCCGCGCACGCGCAGATGCAGGCGA
AGTGGAAGGAGCTCTCCAAGAGGAGGAAGAAGAGGGCCATGCCGGACGAC
CTGGCCTCTCAGGAGACCGTGTCGGCGTGGGGCGAGGTGTCGAGGAACAC
CCTCCACAAGACAAGCCCCAAGGGCATCACGTGCCTCGACCTCCACCCGT
CCAAGCCGAACTTGGTGCTCACCGGCGGTGTGGACAAGACGGCCATCGTC
TTCGACCGGGACACGCAGGCGCAGGTGGCGACGCTCTCTGGCCACACCAA
GAGAATCACGGACGCGTGCTTCCACCCCACTCGGGAGCTGCTGCTCACGT
CCTCGACGGACAAGACCGCCCGCGTGTGGCAGGCCCAGGCGGAAGGGGAC
GGGGGCGGGTACAAGGCTGCCCACGTGCTGGACGACCACGACGGGGAGGT
GGTGGGCGCCACGGTGCACGCCACGGGAGACTTCATGGCCACGGCGTCGA
AGGACAAGAGCTGGGCGTTCTACGACATCAACAGGGGGAGGTTGTTGAAG
CACGTCAAGAACGACGAGTACTCCGAAGGGTACAACTGCGTCCGCTTCCA
CCCGGACGGTCTCATCCTGGGTACCGGAACTGGCGACGCGCTCGTGCGCA
TCTGGGACATGAAGCAGGCGGCCAACGTGGCCAACTTCAAGGGCCACGAG
GGAGGGGTGAACGCTCTGGCCTTCAGCGAGAACGGTTACTACATGGCCTC
GGCGGGCGAGGACGGCTACGCGCGCCTGTGGGACCTCCGCAAGCTCACCA
ACTTCGACAACCTGACCATCGGCGACGGGGCGGCGCACTCGGTAGCGTTC
GACTTCTCGGGGTCCTACCTCGCGGCGGGCGGGAAGAAGTGCACTAAGGT
GTTTGCGGTCAAGACGTGGGGAGAGCTGGCTACTTACGGCGGCTACGGCG
GGTCAGTGACGGGCGTCAAGTTCGGCAAAAGCGCGAGCTTCTTGGCCACA
TCCTCGATGGACAGGACGCTGCGTTTCTACGGCACCGCGTAA
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