mRNA_Ecto-sp6_S_contig9.18019.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig9.18019.1 vs. uniprot
Match: D7G8G9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8G9_ECTSI) HSP 1 Score: 559 bits (1440), Expect = 1.440e-195 Identity = 279/287 (97.21%), Postives = 280/287 (97.56%), Query Frame = 1
Query: 1 MHYEYNTSSVAAVLVCVGLPVLFGYHNRQVETAPTAQSVHWRRRLQHATCGVAVTCGYKWVIRDARTVVAILSIVCASFLALHRLRRRLKSVDKLYILLLGPLLRPQEIRGELPGGFWFVVGSTAAVALFSKDVALQSILHLSLGDPVASVVGIKKGEGNRILPGGKSLAGSLAAFLACSLSTLLLFGCCCRPPGDEGCDSDHVADSDPLSSLIFGHFSACTAVGRGGRDSGGSGTPLLLWFALLGGVSGAVGELLPLGVDDNLSMPIVSGLTFLALRKCRTFDEPG 861
M YEYNTSSVAAVLVCVGLPVLFGYHNRQVETAPTAQSVHWRRRLQHATCGVAVTCGYKWVIRDARTVVAILSI CASFLALHRLRRRLKSVDKLYILLLGPLLRPQEIRG+LPGGFWFVVGSTAAVALFSKDVALQSILHLSLGDPVASVVGIKKGEGNRILPGGKSLAGSLAAFLACSLSTLLLFGCCCRPPGDEG DSDHV DSD LSSLIFGHFSACTAVGRGGRDSGGSGTPLLLWFALLGGVSGAVGELLPLGVDDNLSMPIVSGLTFLALRKC TFD PG
Sbjct: 1 MQYEYNTSSVAAVLVCVGLPVLFGYHNRQVETAPTAQSVHWRRRLQHATCGVAVTCGYKWVIRDARTVVAILSIACASFLALHRLRRRLKSVDKLYILLLGPLLRPQEIRGQLPGGFWFVVGSTAAVALFSKDVALQSILHLSLGDPVASVVGIKKGEGNRILPGGKSLAGSLAAFLACSLSTLLLFGCCCRPPGDEGRDSDHVGDSDLLSSLIFGHFSACTAVGRGGRDSGGSGTPLLLWFALLGGVSGAVGELLPLGVDDNLSMPIVSGLTFLALRKCSTFDGPG 287
BLAST of mRNA_Ecto-sp6_S_contig9.18019.1 vs. uniprot
Match: A0A485LBM6_9STRA (Aste57867_18956 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LBM6_9STRA) HSP 1 Score: 145 bits (365), Expect = 1.220e-35 Identity = 98/269 (36.43%), Postives = 139/269 (51.67%), Query Frame = 1
Query: 16 NTSSVAAVL--VCV-GLPVLFGYHNRQVETAPTAQSVHWRRRLQHATCGVAVTCGYKWVIRDARTVVAILSIVCASFLALHRLRRRLKSVDKLYILLLGPLLRPQEIRGELPGGFWFVVGSTAAVALFSKDVALQSILHLSLGDPVASVVGIKKGEGNRILPGGKSLAGSLAAFLACSLSTLLLFGCCCRPPGDEGCDSDHVADSDPLSSLIFGHFSACTAVGRGGRDSGGSGTPLLLWFALLGGVSGAVGELLPLGVDDNLSMPIVSG 813
+S+VAAV+ CV GL L H+ T T Q +H RR++QHA G+ V G + + VV +L +F + LR++ K V+ Y+ + GP+LR EI LPG FWF++GS ++A FSKDVA SILHLSLGDP AS GI G + L GK++AG + F+ C L+++ +L+ G + T + G +L G++G +GE L LGVDDNLS+P+VSG
Sbjct: 31 TSSAVAAVVFTTCVLGLQFLVVQHS-STSTVRTTQQLHIRRKVQHAGSGLLVVAGTFYA--SSVQVVIVLGCSAVAFYIITYLRKQYKVVNTTYLHVFGPILRQHEIAHRLPGAFWFLLGSALSLAFFSKDVAQLSILHLSLGDPCASFFGITLGHHSHKLANGKTIAGVVGCFVVCLLTSIAFL------------------------ALVDGPVAHGTTLATKGL------------VMVLAGLAGTLGEALSLGVDDNLSLPLVSG 260
BLAST of mRNA_Ecto-sp6_S_contig9.18019.1 vs. uniprot
Match: A0A067D3P6_SAPPC (Phosphatidate cytidylyltransferase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D3P6_SAPPC) HSP 1 Score: 129 bits (325), Expect = 3.900e-30 Identity = 82/238 (34.45%), Postives = 121/238 (50.84%), Query Frame = 1
Query: 103 TAQSVHWRRRLQHATCGVAVTCGYKWVIRDARTVVAILSIVCASFLALHRLRRRLKSVDKLYILLLGPLLRPQEIRGELPGGFWFVVGSTAAVALFSKDVALQSILHLSLGDPVASVVGIKKGEGNRILPGGKSLAGSLAAFLACSLSTLLLFGCCCRPPGDEGCDSDHVADSDPLSSLIFGHFSACTAVGRGGRDSGGSGTPLLLWFALLGGVSGAVGELLPLGVDDNLSMPIVSGL 816
T Q +H RR++QHA GV + + A IL+I +F + +R++ K+VD +Y+ + GP+LR E+ LPG F+F++GS + L+ K +A ++LHLSLGDP AS GI G+ + L GK+LAG + FL C LS++ D + D L LL+ A G++GA+GE+L +G DDNLSMP+ SGL
Sbjct: 60 TTQELHVRRKVQHAGTGVLIVVATFY--GSALEAAVILAICALTFYCVSFMRKQSKAVDAIYLQIFGPILRQHEVGHRLPGAFYFLMGSALSFVLYPKFIAQLAVLHLSLGDPCASFFGITLGQHSTKLWNGKTLAGVIGCFLVCLLSSVAFL---------TTATHDAITDLSTFQQL------------------------LLMGMA---GIAGAIGEVLNVGCDDNLSMPLFSGL 259
BLAST of mRNA_Ecto-sp6_S_contig9.18019.1 vs. uniprot
Match: W4H9K3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H9K3_9STRA) HSP 1 Score: 129 bits (325), Expect = 3.900e-30 Identity = 93/269 (34.57%), Postives = 135/269 (50.19%), Query Frame = 1
Query: 16 NTSSVAAVLVCVGLPVL-FGYHNRQVE-TAPTAQSVHWRRRLQHATCGVAVTCGYKWVIRDARTVVAILSIVCASFLALHRLRRRLKSVDKLYILLLGPLLRPQEIRGELPGGFWFVVGSTAAVALFSKDVALQSILHLSLGDPVASVVGIKKGEGNRILPGGKSLAGSLAAFLACSLSTLLLFGCCCRPPGDEGCDSDHVADSDPLSSLIFGHFSACTAVGRGGRDSGGSGTPLLLWFALLGGVSGAVGELLPLGVDDNLSMPIVSGL 816
TSSVAAV+ V + +L F R T T + +H RR++QHA GV V G + ++ V +L+ +F + +LR++ V+ Y+ + GP+LR EI LPG FWF++G + ++ +F KDVA S+LHLSLGDP AS G+ G L GK++AG F+ C +++ V D+ H SG + AL G V+G VGE+L +G DDNLS+P+VSGL
Sbjct: 32 GTSSVAAVVFIVAILLLQFVVVRRPTHNTVRTTKELHVRRKIQHAGSGVLVVVGSFYA--NSLQVSVVLACSAVAFYIVAQLRKQNNIVNDTYLHVFGPILRQHEIAHRLPGAFWFLLGCSISLLIFKKDVAQLSVLHLSLGDPCASFFGLTLGHHTTKLANGKTIAGVAGCFVVCFATSVAFLS---------------VVDAS------VAHV---------------SGIEKAVVMALCG-VAGTVGEVLYVGCDDNLSLPLVSGL 261
BLAST of mRNA_Ecto-sp6_S_contig9.18019.1 vs. uniprot
Match: A0A024US71_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024US71_9STRA) HSP 1 Score: 127 bits (318), Expect = 3.690e-29 Identity = 89/268 (33.21%), Postives = 127/268 (47.39%), Query Frame = 1
Query: 16 NTSSVAAVLVCVGLPVLFGYHNRQV--ETAPTAQSVHWRRRLQHATCGVAVTCGYKWVIRDARTVVAILSIVCASFLALHRLRRRLKSVDKLYILLLGPLLRPQEIRGELPGGFWFVVGSTAAVALFSKDVALQSILHLSLGDPVASVVGIKKGEGNRILPGGKSLAGSLAAFLACSLSTLLLFGCCCRPPGDEGCDSDHVADSDPLSSLIFGHFSACTAVGRGGRDSGGSGTPLLLWFALLGGVSGAVGELLPLGVDDNLSMPIVSG 813
TSSV AV+ V T T Q +H RR++QHA GV V G + + V +L+ A+F + +LR++ K V+ Y+ + GP+LR EI LPG FWF++G ++ LF KDVA S+LHLSLGDP AS+ G+ G L GK++AG + C ++++ V D+ H S VG L G +G +GE+L +G DDNLS+P+VSG
Sbjct: 34 GTSSVVAVVFIVATXXXXXXXXXXXTHHTVRTTQELHIRRKIQHAGSGVLVVVGSFFA--SSLQVSIVLACSAAAFYIVAQLRQQYKVVNSTYLRVFGPILRQHEIAHRLPGAFWFLLGCCGSLLLFPKDVAQLSVLHLSLGDPCASLFGLTWGHHTSKLSNGKTIAGVVGCMFVCFVTSVGFLS---------------VVDTS------IQHLSGIQRVG----------------VMALCGAAGTLGEVLYVGCDDNLSLPLVSG 262
BLAST of mRNA_Ecto-sp6_S_contig9.18019.1 vs. uniprot
Match: A0A1V9Z468_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z468_9STRA) HSP 1 Score: 124 bits (312), Expect = 2.420e-28 Identity = 80/239 (33.47%), Postives = 125/239 (52.30%), Query Frame = 1
Query: 103 TAQSVHWRRRLQHATCG-VAVTCGYKWVIRDARTVVAILSIVCASFLALHRLRRRLKSVDKLYILLLGPLLRPQEIRGELPGGFWFVVGSTAAVALFSKDVALQSILHLSLGDPVASVVGIKKGEGNRILPGGKSLAGSLAAFLACSLSTLLLFGCCCRPPGDEGCDSDHVADSDPLSSLIFGHFSACTAVGRGGRDSGGSGTPLLLWFALLGGVSGAVGELLPLGVDDNLSMPIVSGL 816
T Q +H RR++QHA G + V + +A V+AI ++ +F + +R++ K+VD +Y+ + GP+LR E+ LPG F+F+ GS + ++ K +A S+LHLSLGDP AS GI G+ + L GK++AG + FL C LS+++ D V + ++F A T GV+GA+GE++ +G DDNLSMP++SGL
Sbjct: 62 TTQELHLRRKVQHAGTGALIVVATFYGTSLEASVVLAICAL---TFYFVSFMRKQSKAVDAIYLQIFGPILRQHEVHHRLPGAFYFLTGSALSFVVYPKFIAQLSVLHLSLGDPCASFFGITLGQHSTRLWNGKTVAGVIGCFLVCLLSSVVFVTLAAH---------DAVKSFSVIKQMLF---MAAT------------------------GVAGAIGEVVNVGCDDNLSMPLLSGL 261
BLAST of mRNA_Ecto-sp6_S_contig9.18019.1 vs. uniprot
Match: A0A1W0ABA5_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0ABA5_9STRA) HSP 1 Score: 123 bits (308), Expect = 8.050e-28 Identity = 84/238 (35.29%), Postives = 117/238 (49.16%), Query Frame = 1
Query: 103 TAQSVHWRRRLQHATCGVAVTCGYKWVIRDARTVVAILSIVCASFLALHRLRRRLKSVDKLYILLLGPLLRPQEIRGELPGGFWFVVGSTAAVALFSKDVALQSILHLSLGDPVASVVGIKKGEGNRILPGGKSLAGSLAAFLACSLSTLLLFGCCCRPPGDEGCDSDHVADSDPLSSLIFGHFSACTAVGRGGRDSGGSGTPLLLWFALLGGVSGAVGELLPLGVDDNLSMPIVSGL 816
T Q +H RR++QHA GV + + TVV L+I F + RR+ K+VD +Y+ + GP+LR E+ LPG F+F+ GS + + K +A S+LHLSLGDP AS GI G L GK+LAG + F C LS++ V D H S V L++ + G++GA+GE+L +G DDNLSMPI+SGL
Sbjct: 60 TTQELHVRRKIQHAGTGVLIVIATFYGSSIEATVV--LAICALIFYGVSVARRQFKAVDTVYLQIFGPILRQHEVGHRLPGAFFFLTGSALSFVFYPKFIAQLSVLHLSLGDPCASFFGITLGHTTSKLWNGKTLAGVIGCFFVCLLSSIAFLS--------------FVVHHD------IAHLSWLKQV-------------LIMGTS---GIAGAIGEVLNVGCDDNLSMPIISGL 259
BLAST of mRNA_Ecto-sp6_S_contig9.18019.1 vs. uniprot
Match: A0A6G0XP90_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XP90_9STRA) HSP 1 Score: 121 bits (303), Expect = 7.590e-27 Identity = 93/269 (34.57%), Postives = 130/269 (48.33%), Query Frame = 1
Query: 16 NTSSVAAVLVCVGLPVLFGYHNRQVETAP--TAQSVHWRRRLQHATCGVAVTCGYKWVIRDARTVVAILSIVCASFLALHRLRRRLKSVDKLYILLLGPLLRPQEIRGELPGGFWFVVGSTAAVALFSKDVALQSILHLSLGDPVASVVGIKKGEGNRILPGGKSLAGSLAAFLACSLSTLLLFGCCCRPPGDEGCDSDHVADSDPLSSLIFGHFSACTAVGRGGRDSGGSGTPLLLWFALLGGVSGAVGELLPLGVDDNLSMPIVSGL 816
+S+VA VL + +L R T+ T + +H RR++QHA G+ V + VV I S A F + +LR++ K V++ Y+ + GP+LR EI LPG FWF++G ++ LF K+VA SILHLSLGDP AS GI G+ + +P GK+LAG + F+ C L + G +A L + +C FA G +GE L LG DDNLS+PIVSGL
Sbjct: 64 GSSAVACVLFTFLILLLQFLVVRHSSTSAVRTTKQLHIRRKVQHAGSGLLVVLASFYGSSVQVAVVLICS--AAVFYVVTQLRKQSKVVNQTYLHVFGPILRQHEIAYRLPGAFWFLLGCAGSMLLFPKEVAQLSILHLSLGDPCASFFGITLGQNSPKMPNGKTLAGVIGCFVVCLLCNI----------GFLSIVDTSIAHLGLLEKALV--VVSCA-------------------FA------GTLGEALYLGCDDNLSLPIVSGL 293
BLAST of mRNA_Ecto-sp6_S_contig9.18019.1 vs. uniprot
Match: A0A2D4BUY6_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BUY6_PYTIN) HSP 1 Score: 109 bits (272), Expect = 3.770e-23 Identity = 93/283 (32.86%), Postives = 130/283 (45.94%), Query Frame = 1
Query: 19 TSSVAAVLVCVGLPVLFGYHNRQVET--------APTAQSVHWRRRLQHATCGVAVTCGYKWVIRDARTVVAILSIVCASFLALHRLRRRLKSVDKLYILLLGPLLRPQEIRGE-LPGGFWFVVGSTAAVALFSKDVALQSILHLSLGDPVASVVGIK-KGEGNRILPGGKSLAGSLAAFLACSLSTLLLFGCCCRPPGDEGCDSDHVADSDPLSSLIFGHFSACTAVGRGGRDSGGSGTPLLL--WFALLGGVSGAVGELLPLGVDDNLSMPIVSGLTFLAL 831
+S++ A +CV VLF + T A T Q +H +R+LQHA G + + DA V +L A F LH LR+R K VD++Y+ LLR EIR +PG F+F+VG+ A +ALF +A +ILHLSLGDP AS+VG + KSL GSL + CS+ ++L+ RDSG S + W A G+ +V E + +GVDDNLSMP++S A+
Sbjct: 2 SSTLVAWTLCVSAIVLFQFLIGGXRTDDRYARHDAVTRQXLHLQRKLQHALTGXMIFAASGFFTVDA--AVLVLFSCAAVFYVLHLLRKRFKRVDEVYLSCFHGLLRHDEIRKTVIPGAFYFLVGAGAVLALFPTPIARLAILHLSLGDPTASLVGTXXRYRRASSASTSKSLEGSLGCLVMCSVVSVLVIT----------------------------------------RDSGTSEFERFVRAWSA---GLCASVAERIHVGVDDNLSMPLLSACLMYAV 239
BLAST of mRNA_Ecto-sp6_S_contig9.18019.1 vs. uniprot
Match: A0A8K1CVZ7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CVZ7_PYTOL) HSP 1 Score: 105 bits (262), Expect = 8.010e-22 Identity = 88/283 (31.10%), Postives = 131/283 (46.29%), Query Frame = 1
Query: 22 SSVAAVLVCVGLPVLF------GYHNRQVETAPTAQSVHWRRRLQHATCGVAVTCGYKWVIRDARTVVAILSIV--CA-SFLALHRLRRRLKSVDKLYILLLGPLLRPQEI-RGELPGGFWFVVGSTAAVALFSKDVALQSILHLSLGDPVASVVGIKKGEGNRILPGGKSLAGSLAAFLACSLSTLLLFGCCCRPPGDEGCDSDHVADSDPLSSLIFGHFSACTAVGRGGRDSGGSGTPLLLWFALLGGVSGAVGELLPLGVDDNLSMPIVS-----GLTFL 825
++VA +C+G+ V F G V+ Q +H +R+ QHA G+ + +V+ V A ++++ CA +F LH LR+R K VD LY+ LLR +EI + LPG F+F+VGS ++LF +A +ILHLS GDP AS++G + G R L GKS G L ++ SL T + SG + + + L G+ AV E + G DDNLS+P++S GLT+L
Sbjct: 6 TTVATWALCIGVIVAFQFLIGGGRARVDVKAIAKRQDLHLQRKAQHAVTGLMI-----YVVSGMFPVYADVTVLFTCALAFYGLHALRKRSKRVDMLYLRCFHGLLRREEIQKAVLPGAFYFLVGSGLVLSLFPTAIARLAILHLSFGDPSASLIGSRFGR--RRLASGKSFEGFLGCWIVASLVTWVE-----------------------------------------------SGISVSITHSALRGLCAAVAESIDFGWDDNLSLPVISALLQTGLTYL 234 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18019.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig9.18019.1 >prot_Ecto-sp6_S_contig9.18019.1 ID=prot_Ecto-sp6_S_contig9.18019.1|Name=mRNA_Ecto-sp6_S_contig9.18019.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=288bp MHYEYNTSSVAAVLVCVGLPVLFGYHNRQVETAPTAQSVHWRRRLQHATCback to top mRNA from alignment at Ecto-sp6_S_contig9:321932..325114- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig9.18019.1 ID=mRNA_Ecto-sp6_S_contig9.18019.1|Name=mRNA_Ecto-sp6_S_contig9.18019.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=3183bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:321932..325114- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig9:321932..325114- >mRNA_Ecto-sp6_S_contig9.18019.1 ID=mRNA_Ecto-sp6_S_contig9.18019.1|Name=mRNA_Ecto-sp6_S_contig9.18019.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=864bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:321932..325114- (Ectocarpus species6 EcLAC_371)back to top |