mRNA_Ecto-sp6_S_contig9.18017.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig9.18017.1 vs. uniprot
Match: D7G8H1_ECTSI (Similar to L-xylulose reductase (XR) (Dicarbonyl/L-xylulose reductase) n=3 Tax=Ectocarpus TaxID=2879 RepID=D7G8H1_ECTSI) HSP 1 Score: 524 bits (1349), Expect = 7.460e-187 Identity = 263/277 (94.95%), Postives = 271/277 (97.83%), Query Frame = 3
Query: 12 MPAGREAPAEPSFPWRSDMLAGKTAIVTGGSAGIGAAITIALLQAGASVAVLARSRSKYDKLVPVLEERKLPVDKTTFISIDLSSTDAIRKATVEANEWAGGCADILVNNAGVATIAPILEASVEDWDWTMNVNVRAPFIMSQECAKRMIARGKGGKIVSVSSTASLFALHDHAAYCTSKAAINGLTQVMSAEWSKHDINCNTVGPTIVLTDMGAKAWGDPAKGDPMIDRTPLGRFAEPWEMAHGVVYLVSPSSSQMCGQMLLLDGGITTTGTPCGT 842
MP GR APAEP+FPWRSDMLAGKTAIVTGGSAGIGAAITIALLQAGASVAVLARSRSKYDKLVP+LEERKLPVDKTTFISIDLSSTDAIR+A VEANEWAGGCADILVNNAGVATIAPILEASVEDWDWTMNVNVRAPFIM+QECAKRMIARG+GGKIVS SSTASLFALHDHAAYCTSKAAI GLT+VMSAEWSK+DINCNTVGPTIVLTDMGAKAWG+P KGDPMIDRTPLGRFAEPWEMAHGVVYLVSPSSSQMCGQMLLLDGGITTTGTPCGT
Sbjct: 1 MPTGRAAPAEPAFPWRSDMLAGKTAIVTGGSAGIGAAITIALLQAGASVAVLARSRSKYDKLVPLLEERKLPVDKTTFISIDLSSTDAIRQAAVEANEWAGGCADILVNNAGVATIAPILEASVEDWDWTMNVNVRAPFIMAQECAKRMIARGQGGKIVSTSSTASLFALHDHAAYCTSKAAIQGLTKVMSAEWSKYDINCNTVGPTIVLTDMGAKAWGEPEKGDPMIDRTPLGRFAEPWEMAHGVVYLVSPSSSQMCGQMLLLDGGITTTGTPCGT 277
BLAST of mRNA_Ecto-sp6_S_contig9.18017.1 vs. uniprot
Match: D7G8H0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8H0_ECTSI) HSP 1 Score: 457 bits (1177), Expect = 6.150e-161 Identity = 229/258 (88.76%), Postives = 243/258 (94.19%), Query Frame = 3
Query: 66 MLAGKTAIVTGGSAGIGAAITIALLQAGASVAVLARSRSKYDKLVPVLEERKLPVDKTTFISIDLSSTDAIRKATVEANEWAGGCADILVNNAGVATIAPILEASVEDWDWTMNVNVRAPFIMSQECAKRMIARGKGGKIVSVSSTASLFALHDHAAYCTSKAAINGLTQVMSAEWSKHDINCNTVGPTIVLTDMGAKAWGDPAKGDPMIDRTPLGRFAEPWEMAHGVVYLVSPSSSQMCGQMLLLDGGITTTGTPCG 839
MLA K AIVTGGSAGIGA+IT ALL+AGASVAVLARSRSK+D L+PVLEE+KLPVDKT FI IDLSSTD IR+A VEAN+WAGGCADILVNNAGVATIAPILEA++EDWDWTMNVNVRAPFIM+QECAKRMIARGKGGKIV+ SSTAS FALHDHAAYCTSKAAINGLT+VMSAEWSKHDINCNT+GPTIVLTDM KAWG P KGDPM+DRTPLGRFAEPWEMAHGVVYLVSPSS QMCGQMLLLDGGITTTGTPCG
Sbjct: 1 MLADKAAIVTGGSAGIGASITEALLRAGASVAVLARSRSKFDGLLPVLEEKKLPVDKTHFIPIDLSSTDDIRRAAVEANDWAGGCADILVNNAGVATIAPILEATIEDWDWTMNVNVRAPFIMAQECAKRMIARGKGGKIVNTSSTASRFALHDHAAYCTSKAAINGLTKVMSAEWSKHDINCNTIGPTIVLTDMCTKAWGKPEKGDPMVDRTPLGRFAEPWEMAHGVVYLVSPSSIQMCGQMLLLDGGITTTGTPCG 258
BLAST of mRNA_Ecto-sp6_S_contig9.18017.1 vs. uniprot
Match: A0A6H5JWZ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWZ3_9PHAE) HSP 1 Score: 457 bits (1177), Expect = 1.140e-157 Identity = 242/343 (70.55%), Postives = 259/343 (75.51%), Query Frame = 3
Query: 12 MPAGREAPAEPSFPWRSDMLAGKTAIVTGGSAGIGAAITIALLQAGASVAVLARSRSKYDKLVPVLEERKLPVDKTTFISIDLSSTDAIRKATVEANEWAGGCADILVNNAGVATIAPILEASVEDWDWTMNV------------------------------------------NVRAPFIMSQECAKRMIARGKGGKIVSVSSTASLFALHDHAAYCTSKAAINGLT-------------------------QVMSAEWSKHDINCNTVGPTIVLTDMGAKAWGDPAKGDPMIDRTPLGRFAEPWEMAHGVVYLVSPSSSQMCGQMLLLDGGITTTGTPCG 839
M GR AP EP FPWR DMLAGK AIVTGGSAGIGA+IT ALL+AGASVAVLARSRSK+D L+P+LEE+KLPVDKT FI IDLSSTD IR+A +EAN+WAGGCADILVNNAGVATIAPILEA++EDWDWTMNV NVRAPFIM+QECAKRMI RGKGGKIV+ SSTAS FALHDHAAYCTSKAAINGLT +VMSAEWSKHDINCNT+GPTIVLTDMGAKAWG+P KGDPM+DRTPLGRFAEPWEMAHGVVYLVSPSSSQMCGQMLLLDGGITTTGTPCG
Sbjct: 130 MATGRAAPEEPPFPWRCDMLAGKAAIVTGGSAGIGASITEALLRAGASVAVLARSRSKFDGLLPILEEKKLPVDKTHFIPIDLSSTDDIRRAAIEANDWAGGCADILVNNAGVATIAPILEATIEDWDWTMNVRSRRGNPIEIFRTGNNSCEGPFQRQNRNLHVRSLCVGRLVKVNVRAPFIMAQECAKRMIVRGKGGKIVNTSSTASRFALHDHAAYCTSKAAINGLTNVSRHNFLTSPHWLRLCSLHRACGVKVMSAEWSKHDINCNTIGPTIVLTDMGAKAWGEPEKGDPMVDRTPLGRFAEPWEMAHGVVYLVSPSSSQMCGQMLLLDGGITTTGTPCG 472
BLAST of mRNA_Ecto-sp6_S_contig9.18017.1 vs. uniprot
Match: A0A835YTK4_9STRA (Putative short-chain dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTK4_9STRA) HSP 1 Score: 258 bits (658), Expect = 4.440e-82 Identity = 137/261 (52.49%), Postives = 185/261 (70.88%), Query Frame = 3
Query: 36 AEPSFPWRSDMLAGKTAIVTGGSAGIGAAITIALLQAGASVAVLARSRSKYDKLVPVLEERKLPVDKTTFISIDLSSTDAIRKATVEANEWAGGCADILVNNAGVATIAPILEASVEDWDWTMNVNVRAPFIMSQECAKRMIARGKGGKIVSVSSTASLFALHDHAAYCTSKAAINGLTQVMSAEWSKHDINCNTVGPTIVLTDMGAKAWGDPAKGDPMIDRTPLGRFAEPWEMAHGVVYLVSPSSSQMCGQMLLLDGGIT 818
++ +FP+R +LA + A+VTGG+ GIG AIT AL++AGAS AV+ARS++K+D ++ E + D FI DL S DA A A WA G DILVNNAGVA + P+ E VE WD M VN RAPF+M+Q CA MI + + GKI+++SS A + DHAAYC SKAAI+ LT+VM+ EW+KH+I N++GPT+V+T+MG + WG A G+PM RTP+GRFAEP E+A+ VVYL S +S+ +CGQ LL++GG+T
Sbjct: 3 SDDTFPFRPTLLANRRAVVTGGNDGIGVAITCALVKAGASCAVVARSKAKFDAMLDTHEFLQGSAD---FIQADLESADATISAGKAAVAWADGHVDILVNNAGVALLGPLTEYGVEAWDKVMAVNARAPFLMAQACAPGMIEQ-RAGKIINISSQAGTIGIADHAAYCASKAAIDALTRVMTVEWAKHNIQANSIGPTVVMTEMGKRVWGG-AAGEPMRQRTPIGRFAEPDEVANMVVYLCSDASNILCGQTLLMEGGLT 258
BLAST of mRNA_Ecto-sp6_S_contig9.18017.1 vs. uniprot
Match: A0A6G6X370_9HYPH (Glucose 1-dehydrogenase n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A6G6X370_9HYPH) HSP 1 Score: 216 bits (549), Expect = 1.110e-65 Identity = 118/250 (47.20%), Postives = 167/250 (66.80%), Query Frame = 3
Query: 69 LAGKTAIVTGGSAGIGAAITIALLQAGASVAVLARSRSKYDKLVPVLEERKLPVDKTTFISIDLSSTDAIRKATVEANEWAGGCADILVNNAGVATIAPILEASVEDWDWTMNVNVRAPFIMSQECAKRMIARGKGGKIVSVSSTASLFALHDHAAYCTSKAAINGLTQVMSAEWSKHDINCNTVGPTIVLTDMGAKAWGDPAKGDPMIDRTPLGRFAEPWEMAHGVVYLVSPSSSQMCGQMLLLDGGIT 818
L GK A+VTG + GIG I L AGA +A + R + ++ +E K I+ DL+S + +A A + + G DILVNNAG+A I +LEAS++DWD TM VN+RAPF++++E A +MIA+ + GKI+++SS A + A+ HAAY SK +N LT+VM+ EW++H+I N + PTI+LT MG + WGDPAKG PM+DRTPLGRF +P E+A V+YL S +S +CG+ +L+DGG T
Sbjct: 10 LTGKAALVTGATKGIGLDICKVLADAGADIAAVGRDEAGLAEVSRAVEALGR---KCVTIAADLASAEGPIEAARTALQ-SFGTIDILVNNAGIALIDTLLEASIDDWDKTMAVNLRAPFLLAKELAPKMIAQ-RAGKIINISSQAGIVAIDGHAAYSASKGGLNMLTKVMTCEWARHNIQTNAICPTIILTPMGEQVWGDPAKGKPMLDRTPLGRFGKPQEVADLVLYLASHASDLVCGETILIDGGFT 254
BLAST of mRNA_Ecto-sp6_S_contig9.18017.1 vs. uniprot
Match: A0A518B898_9BACT (2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase n=1 Tax=Planctomycetes bacterium Pan216 TaxID=2527975 RepID=A0A518B898_9BACT) HSP 1 Score: 214 bits (544), Expect = 7.330e-65 Identity = 118/256 (46.09%), Postives = 163/256 (63.67%), Query Frame = 3
Query: 69 LAGKTAIVTGGSAGIGAAITIALLQAGASVAVLARSRSKYDKLVPVLEERKLPVD----KTTFISIDLSSTDAIRKATVEANEWAGGCADILVNNAGVATIAPILEASVEDWDWTMNVNVRAPFIMSQECAKRMIARGKGGKIVSVSSTASLFALHDHAAYCTSKAAINGLTQVMSAEWSKHDINCNTVGPTIVLTDMGAKAWGDPAKGDPMIDRTPLGRFAEPWEMAHGVVYLVSPSSSQMCGQMLLLDGGITTT 824
L GK A+VTG S G+GA I +AGA VA++AR L + K V+ + I+ DL +T+ R+A A E G DILVNNAG+ + + EA+++ WD TM +N+RAPF++++E A RMI +G G KIVS+SS A + L +H AYC SK + L VM AEWS+H+I N + PT+V+TDMG + W DPAK PM+DR P+GRF EP E+A ++L SP+S +CGQ++ +DGGIT T
Sbjct: 10 LIGKRALVTGASRGLGAQIATLFAEAGADVALVARDEEG-------LHQTKATVEAGGRQALVIAADLGTTEGPREAASTALEHFGAI-DILVNNAGIVHLESLREATIDHWDETMAINLRAPFLLARELAPRMIEQGSG-KIVSISSVAGVRGLPNHGAYCASKGGLQMLNAVMVAEWSRHNIQANVIAPTVVMTDMGKQVWSDPAKSGPMLDRIPMGRFGEPVEIADLALFLASPASDFVCGQVIEIDGGITQT 256
BLAST of mRNA_Ecto-sp6_S_contig9.18017.1 vs. uniprot
Match: D7G8H2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8H2_ECTSI) HSP 1 Score: 209 bits (531), Expect = 2.020e-64 Identity = 108/136 (79.41%), Postives = 118/136 (86.76%), Query Frame = 3
Query: 12 MPAGREAPAEPSFPWRSDMLAGKTAIVTGGSAGIGAAITIALLQAGASVAVLARSRSKYDKLVPVLEERKLPVDKTTFISIDLSSTDAIRKATVEANEWAGGCADILVNNAGVATIAPILEASVEDWDWTMNVNVR 419
M GR EP FPWR DMLAGK AIVTGG +GIGA+IT ALL+AGASVAVLARSRSK+D L+PVLEE+KLPVDKT FI IDLSSTD IR+A VEAN+WAGGCADILVNNAGVATIAPILEA++EDWDWTMNV R
Sbjct: 1 MATGRAPREEPPFPWRCDMLAGKAAIVTGGRSGIGASITEALLRAGASVAVLARSRSKFDGLLPVLEEKKLPVDKTHFIPIDLSSTDDIRRAAVEANDWAGGCADILVNNAGVATIAPILEATIEDWDWTMNVRNR 136
BLAST of mRNA_Ecto-sp6_S_contig9.18017.1 vs. uniprot
Match: A0A7J7ILT2_9RHOD (Short-chain dehydrogenase reductase n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7ILT2_9RHOD) HSP 1 Score: 211 bits (536), Expect = 1.100e-63 Identity = 115/257 (44.75%), Postives = 169/257 (65.76%), Query Frame = 3
Query: 54 WRSDMLAGKTAIVTGGSAGIGAAITIALLQAGASVAVLARSRSKYDKLVPVLEERKLPVDKTTFISIDLSSTDAIRKATVEA-NEWAGGCADILVNNAGVATIAPILEASVEDWDWTMNVNVRAPFIMSQECAKR-MIARGKGGKIVSVSSTASLFALHDHAAYCTSKAAINGLTQVMSAEWSKHDINCNTVGPTIVLTDMGAKAWGDPAKGDPMIDRTPLGRFAEPWEMAHGVVYLVSPSSSQMCGQMLLLDGGIT 818
+R+D+L GK A+VTG S GIGAAI L+AG S VL SR + + + + + +L + F S++L T A+ + + +W+ DILVNNAG+A + P+ E S+ +W+ TM VNVRAPF+++++ + MI RG GGKI+++SS ASL + +HAAYC+SKAA+N LT+ M+ EW + I CN V P+I++TDMG + W DP K P++ R P+GRFA P E+A V++L SP + + GQ + DGG T
Sbjct: 3 FRADVLQGKVAVVTGASRGIGAAIADCFLEAGVSGLVLI-SREQTEFVHQLRKRAELKGSRVGFYSLELEDTAAVERCAEQILQDWSQ--VDILVNNAGLALLNPLTELSIGEWERTMAVNVRAPFLLARKFVRESMIPRGVGGKIINISSVASLGGVSEHAAYCSSKAALNSLTKTMAIEWGPYGIQCNVVCPSIIMTDMGRQVWEDPEKHGPVLARVPIGRFANPPEIARVVLFLASPENCVVNGQCIAPDGGYT 256
BLAST of mRNA_Ecto-sp6_S_contig9.18017.1 vs. uniprot
Match: A0A5J4YVE1_PORPP (L-xylulose reductase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YVE1_PORPP) HSP 1 Score: 214 bits (545), Expect = 2.530e-63 Identity = 117/248 (47.18%), Postives = 161/248 (64.92%), Query Frame = 3
Query: 69 LAGKTAIVTGGSAGIGAAITIALLQAGASVAVLARSRSKYDKLVPVLEERKLPVDKTTFISIDLSSTDAIRKATVEANEWAGGCADILVNNAGVATIAPILEASVEDWDWTMNVNVRAPFIMSQECAKRMIARGKGGKIVSVSSTASLFALHDHAAYCTSKAAINGLTQVMSAEWSKHDINCNTVGPTIVLTDMGAKAWGDPAKGDPMIDRTPLGRFAEPWEMAHGVVYLVSPSSSQMCGQMLLLDGG 812
L+G+TA+VTGG+ GIGAAI+ AL GA V ++AR + L + E R+ + F++ DLS ++ + T + + +ILVNNAGVA +AP+ +ASV DWD TM VN+RAP+I++Q A M+ G G IV+VSS A ALH+H AYCTSKAA+N LT+VM+ EW + N V PT++LTDMG K WG K PM+ R PLGRF +P+E+ V YL S ++S + GQ++ DGG
Sbjct: 147 LSGRTAVVTGGNRGIGAAISHALAAHGADVLIVARDEAS--SLEVLRELRETHGVQGAFVACDLSDAASVARVTPQCVAASPSTLNILVNNAGVALLAPLRDASVVDWDTTMAVNLRAPYILAQHLATHMMDAGTAGAIVNVSSAAGKGALHEHGAYCTSKAALNMLTKVMALEWGPSGVRTNAVCPTVILTDMGQKVWGPTEKAAPMLARIPLGRFGQPYEVGDLVAYLCSDAASLINGQLISADGG 392
BLAST of mRNA_Ecto-sp6_S_contig9.18017.1 vs. uniprot
Match: A0A2N6AQR8_9HYPH (Short-chain dehydrogenase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A2N6AQR8_9HYPH) HSP 1 Score: 209 bits (532), Expect = 4.020e-63 Identity = 116/250 (46.40%), Postives = 162/250 (64.80%), Query Frame = 3
Query: 69 LAGKTAIVTGGSAGIGAAITIALLQAGASVAVLARSRSKYDKLVPVLE--ERKLPVDKTTFISIDLSSTDAIRKATVEANEWAGGCADILVNNAGVATIAPILEASVEDWDWTMNVNVRAPFIMSQECAKRMIARGKGGKIVSVSSTASLFALHDHAAYCTSKAAINGLTQVMSAEWSKHDINCNTVGPTIVLTDMGAKAWGDPAKGDPMIDRTPLGRFAEPWEMAHGVVYLVSPSSSQMCGQMLLLDGG 812
L G+TA+VTG S GIGA I AGA + +AR + + +E ERK V + DLS DA+R+ +A E AG DILVN+AG+A +AP LE S+EDWD TM VNVRAPF+++Q A +MIAR + GKI+++SS + AL DHAAY TSK A+N +T+ + AEW++H+I N + PT+V+T MG + W K P + RTPLGRF EP E+A +YL SP++ + G +++++GG
Sbjct: 10 LEGRTALVTGASKGIGAEICAVFADAGADIIAVARDPAGLSRTAAAVESLERKCYV-----LPCDLSDADAVRRLGEDAIEVAGRV-DILVNDAGIARVAPALELSLEDWDTTMAVNVRAPFLLAQSLAPQMIAR-RWGKIINISSQTGVIALEDHAAYATSKGALNAMTKSLMAEWARHNIQVNAICPTVVMTPMGRELWSPEEKSAPFLARTPLGRFGEPVEIADLALYLASPAAELVNGAIIMIEGG 252 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18017.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig9.18017.1 >prot_Ecto-sp6_S_contig9.18017.1 ID=prot_Ecto-sp6_S_contig9.18017.1|Name=mRNA_Ecto-sp6_S_contig9.18017.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=278bp MPAGREAPAEPSFPWRSDMLAGKTAIVTGGSAGIGAAITIALLQAGASVAback to top mRNA from alignment at Ecto-sp6_S_contig9:297073..305620+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig9.18017.1 ID=mRNA_Ecto-sp6_S_contig9.18017.1|Name=mRNA_Ecto-sp6_S_contig9.18017.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=8548bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:297073..305620+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig9:297073..305620+ >mRNA_Ecto-sp6_S_contig9.18017.1 ID=mRNA_Ecto-sp6_S_contig9.18017.1|Name=mRNA_Ecto-sp6_S_contig9.18017.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=834bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:297073..305620+ (Ectocarpus species6 EcLAC_371)back to top |