mRNA_Ecto-sp6_S_contig9.18014.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig9.18014.1
Unique NamemRNA_Ecto-sp6_S_contig9.18014.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
[Close]
BLAST of mRNA_Ecto-sp6_S_contig9.18014.1 vs. uniprot
Match: D7G8H5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8H5_ECTSI)

HSP 1 Score: 1168 bits (3021), Expect = 0.000e+0
Identity = 581/594 (97.81%), Postives = 586/594 (98.65%), Query Frame = 2 
Query:   53 MKTVNNAVGRPLPEAKASKLPRHSKENPDVRHTFDRKGDWSLMDAARWHDSMYYEGSYFWQLFHDTQVYTRRATSIYCGPPARSFSVEVGCGTGDVILSLASDFKHSLGIDINDGFLAYAQEQTPKELKDKISFCKGSATDLIDIVSAHPSIDNTSAPTVVTCVNNTIGIFPDAIKARTYSQQMKELAGENGIIIVGFWNGNKFGEALQYFYYKHPELCGSLKGAVIDMEDRHLDTAEGYHTHWTTPEEARRVLEESGFNVLDITEIGVGVLCTCSGGASIPSPRGGGGVATAATFLPHPDTLSEDTLIAEEEAHSLNHYGDR-QEYFYRELWGGLHQHLGLYEDPATIALPANKRVVEACENSTVVLFSIAKPTMGTKAVELGSGYGSGSRYLAVNFGATVDCVDLNRESNDLNRRLTEQAGLSDLVRVGEPATYFSTGLPAASFGFCFSQDALCHAGRQTSKALEEAARLLAPGGVFACTNILRAEEATNEELEEVLARLQVTSLETHKSFVGHARSAGLEPLESLDKTTSLAVHFKTLLEIAETRKADMLKHTSPEYVDELSKDLRNWLSASNRGVLRWSFFTFRKSVARK 1831
            MKTVNNAVGRPLPEAKASKLPRHSKENPDVRHTFDRKGDWSLMDAARWHDSMYYEGSYFWQLFHDTQVYTRRATSIYCGPPARSFSVEVGCGTGDVILSLASDFKHSLGIDINDGFLAYAQEQTPKELKDKISFCKGSATDLIDIVSAHPSIDNTSAPTVVTCVNNTIGIFPDAIK+RTYSQ MKELAGENGIIIVGFWNGNKFGEALQYFYYKHPELCGSLKGAVIDMEDRHLDTAEGYHTHWTTPEEARRVLEESGFNVLDITEIGVGVLCTCSGGAS PSPRGGGGVATAATFLPHPDTLSEDTLIAEEEAHSLNHYGD   +YFYRELWGGLHQHLGLYEDPATIALPANKRVVEACENSTVVLFSIAKPTMGTKAVELGSGYGSGSRYLAVNFGATVDCVDLNRESNDLNRRLTEQAGLSDLVRVGEPAT+FSTGLPAASFGFCFSQDALCHAGRQT KALEEAARLLAPGGVFACTNILRAEEATNEELEEVLARLQVTSLETHKSFVGHARSAGLEPLESLDKTTSLAVHFKTLLE+AETRKADMLKHTSPEYVDELSKDLRNWLSASNRGVLRWSFFTFRKS  +K
Sbjct:    1 MKTVNNAVGRPLPEAKASKLPRHSKENPDVRHTFDRKGDWSLMDAARWHDSMYYEGSYFWQLFHDTQVYTRRATSIYCGPPARSFSVEVGCGTGDVILSLASDFKHSLGIDINDGFLAYAQEQTPKELKDKISFCKGSATDLIDIVSAHPSIDNTSAPTVVTCVNNTIGIFPDAIKSRTYSQ-MKELAGENGIIIVGFWNGNKFGEALQYFYYKHPELCGSLKGAVIDMEDRHLDTAEGYHTHWTTPEEARRVLEESGFNVLDITEIGVGVLCTCSGGASTPSPRGGGGVATAATFLPHPDTLSEDTLIAEEEAHSLNHYGDSFTQYFYRELWGGLHQHLGLYEDPATIALPANKRVVEACENSTVVLFSIAKPTMGTKAVELGSGYGSGSRYLAVNFGATVDCVDLNRESNDLNRRLTEQAGLSDLVRVGEPATFFSTGLPAASFGFCFSQDALCHAGRQTPKALEEAARLLAPGGVFACTNILRAEEATNEELEEVLARLQVTSLETHKSFVGHARSAGLEPLESLDKTTSLAVHFKTLLEVAETRKADMLKHTSPEYVDELSKDLRNWLSASNRGVLRWSFFTFRKSATQK 593
[Close]
BLAST of mRNA_Ecto-sp6_S_contig9.18014.1 vs. uniprot
Match: A0A836CC57_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC57_9STRA)

HSP 1 Score: 527 bits (1358), Expect = 2.760e-168
Identity = 287/579 (49.57%), Postives = 379/579 (65.46%), Query Frame = 2 
Query:  149 TFDRKGDWSLMDAARWHDSMYYEGSYFWQLFHDTQVYTRRATSIYCGPPARSFSVEVGCGTGDVILSLASDFKHSLGIDINDGFLAYAQEQTPKELKDKISFCKGSATDLIDIVSAH-PSIDNTSAPTVVTCVNNTIGIFPDAIKARTYSQQMKELAGENGIIIVGFWNGNKFGEALQYFYYKHPELCGSLKGAVIDMEDRHLDTAEGYHTHWTTPEEARRVLEESGFNVLDITEIGVGVLCTCSGGAS--IPSP-------RGGGG------VATAATFLPHPDTLSEDTLIAEEEAHSLNH-----YGDR-QEYFYRELWGG-LHQHLGLYEDPATIALPANKRVVEACENSTVVLFSIAKPTMGTKAVELGSGYGSGSRYLAVNFGATVDCVDLNRESNDLNRRLTEQAGLSDLVRVGEPATYFSTGLPAASFGFCFSQDALCHAGRQTSKALEEAARLLAPGGVFACTNILRAEEATNEELEEVLARLQVTSLETHKSFVGHARSAGLEPLESLDKTTSLAVHFKTLLEIAETRKADMLKHTSPEYVDELSKDLRNWLSASNRGVLRWSFFTFRK 1816
            TF + GDWS M A+RWHD+MY+EG+YF +L+ DT VYT+   + YCG  A+  +VEVG GTGDVIL +A DF++S+G+DIN  FL Y++ +  K+L  ++ F +GSAT+L DI+    P++ + S   VVTCVNNTIGIFPDAIK  TY QQM+ELAG +GI+IVGFWNGNKFG+ALQ+FY ++P+LCG++ GA ID E   L TA GY THW+TPEEAR VL   GF+V+D+TE+GVGVLCTC G AS  +P P       RG G       VA AAT   +  +++ D+  +  +  ++       Y D  Q+ FYRE+WGG  +QH+GLY+  A   LPA  R VEACE +T+ L   A+P  G +  E GSG+G  +RYLA NF ATV CVD++R +N++NR+ T +AGL   V VG   ++F TG P ASF    SQD LCHA     +ALEE AR+L PGGV A TNI+   +A  EEL  VLARL+++ +++  S +  A  AGLE +E  D T SL  HF T+LE+ + R   ++  TS  YV +    L  W  A   G LRW +F FRK
Sbjct:    8 TFSKLGDWSTMTASRWHDAMYFEGAYFMKLWADTLVYTKEKAAKYCGGAAKCTNVEVGSGTGDVILGMAGDFRYSVGLDINSEFLRYSRARVAKDLDKRVKFIEGSATELTDIIMREVPTVRSGSV--VVTCVNNTIGIFPDAIKPATY-QQMQELAGPDGIVIVGFWNGNKFGDALQHFYARNPQLCGTMDGADIDWEGHTLTTAGGYRTHWSTPEEARTVLLRYGFDVVDVTEVGVGVLCTCKGRASGKVPPPQLAQPQRRGRGSSRDWTAVAAAATASSNNGSVNGDSRASSPDRRAIETAVAALYEDTYQQQFYREVWGGGRNQHIGLYDAAALGGLPAAARAVEACELATLRLVEKARPAHGARIAEFGSGFGGTARYLAANFDATVVCVDISRHANEVNRQQTREAGLQSKVLVGAERSFFETGEPDASFAMVVSQDTLCHAEDYAGRALEEGARILQPGGVMAFTNIVVDPQARPEELTRVLARLKMSCMDSPDSLIAAAEVAGLELVEFEDTTPSLVQHFSTILEVLDERCDALVATTSEAYVADTVGGLEAWRDAGINGALRWGYFVFRK 583
[Close]
BLAST of mRNA_Ecto-sp6_S_contig9.18014.1 vs. uniprot
Match: A0A6H5KUA7_9PHAE (Methyltransf_11 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUA7_9PHAE)

HSP 1 Score: 424 bits (1090), Expect = 5.580e-135
Identity = 213/219 (97.26%), Postives = 217/219 (99.09%), Query Frame = 2 
Query: 1175 MGTKAVELGSGYGSGSRYLAVNFGATVDCVDLNRESNDLNRRLTEQAGLSDLVRVGEPATYFSTGLPAASFGFCFSQDALCHAGRQTSKALEEAARLLAPGGVFACTNILRAEEATNEELEEVLARLQVTSLETHKSFVGHARSAGLEPLESLDKTTSLAVHFKTLLEIAETRKADMLKHTSPEYVDELSKDLRNWLSASNRGVLRWSFFTFRKSVARK 1831
            MGTKAVELGSGYGSGSRYLAVNFGATVDC+DLNRESNDLNRRLTEQAGLSDLVRVGEPATYFSTGLPAASFGFCFSQDALCHAGRQTSKALEEAARLLAPGGVFACTNILRAEEATNEELEEVLARLQVTSLETHKSFVGHARSAGLEPLESLDKTTS+AVHFKTLLE+AETRKADMLKHTSPEYVDEL+KDLRNWLSASNRGVLRWSFFTFRKS  RK
Sbjct:    1 MGTKAVELGSGYGSGSRYLAVNFGATVDCIDLNRESNDLNRRLTEQAGLSDLVRVGEPATYFSTGLPAASFGFCFSQDALCHAGRQTSKALEEAARLLAPGGVFACTNILRAEEATNEELEEVLARLQVTSLETHKSFVGHARSAGLEPLESLDKTTSMAVHFKTLLEVAETRKADMLKHTSPEYVDELAKDLRNWLSASNRGVLRWSFFTFRKSATRK 219
[Close]
BLAST of mRNA_Ecto-sp6_S_contig9.18014.1 vs. uniprot
Match: A0A835YZA4_9STRA (Putative sarcosine-dimethylglycine methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZA4_9STRA)

HSP 1 Score: 181 bits (460), Expect = 3.110e-47
Identity = 95/264 (35.98%), Postives = 159/264 (60.23%), Query Frame = 2 
Query: 1031 FYRELWGGLHQHLGLYEDP-ATIALPANKRVVEACENSTVVLFSIAKPT-MGTKAVELGSGYGSGSRYLAVNFGATVDCVDLNRESNDLNRRLTEQAGLSDLVRVGEPATYFSTGLPAASFGFCFSQDALCHAGRQTSKALEEAARLLAPGGVFACTNILRAEEATNEELEEVLARLQVTSLETHKSFVGHARSAGLEPLESLDKTTSLAVHFKTLLEIAETRKADMLKHTSPEYVDELSKDLRNWLSASNRGVLRWSFFTFRK 1816
            FY+++WGG   H+GLY+DP  T ++   +R+  A E S   LF+ A+P    +K +++GS YG  +R  A  +G TV C+D++ + N++NR  T   GL+D V +    ++F TG PA ++    SQD+L HAG +  +A+EEAAR+L PGG    T+I+++ +A   EL+ V  R+ +  + +  S+   A   GL+ +   D+T++LA H+  +  + E ++A+ L + SP YVD + + L  W++A+ +  L W +F FRK
Sbjct:   29 FYKQVWGGSFIHVGLYDDPQVTDSMDPMERIKLASELSAKRLFATAEPLDSSSKVMDMGSAYGGNARLCAKTYGCTVTCIDISCKENEVNRSTTAAEGLADKVLIPGERSFFETGEPAGAYDAVVSQDSLLHAGSERCRAIEEAARVLKPGGCLVFTDIMQSNDANTAELDAVYRRIHLEDMGSPASYQAWAERCGLKLVGFEDRTSNLAAHYGAVKGVLEAKRAE-LTNISPAYVDNMIRGLDAWVNAAGKSNLCWGYFLFRK 291
[Close]
BLAST of mRNA_Ecto-sp6_S_contig9.18014.1 vs. uniprot
Match: F2UCP4_SALR5 (Methyltranfer_dom domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UCP4_SALR5)

HSP 1 Score: 184 bits (468), Expect = 1.130e-46
Identity = 97/242 (40.08%), Postives = 142/242 (58.68%), Query Frame = 2 
Query:  149 TFDRKGDWSLMDAARWHDSMYYEGSYFWQLFHDTQVYTRRATSIYCGPPARSFSVEVGCGTGDVILSLASDFKHSLGIDINDGFLAYAQEQTPKELKDKISFCKGSATDLIDIVSAHPSIDNTSAPT--VVTCVNNTIGIFPDAIKARTYSQQMKELAGENGIIIVGFWNGNKFGEALQYFYYKHPELCGSLKGAVIDMEDRHLDTAEGYHTHWTTPEEARRVLEESGFNVLDITEIGVGVL 868
            T +  GDWSL    +W ++++   S+F QL+ DT  +  +      G       +EVGCGTG+ I+ LAS  K+ +GIDIN+ F+ Y+Q Q      D + F  G AT L +++S     D    P   +V CV NTIGI P+ ++   Y + M E+AG++G  +V +WNGN FGEA+Q+FY ++P+LCG  KG  +D +   L T  GY+T WT PEEAR +L+  G   L++ E G GV+
Sbjct:  195 TDEEGGDWSLFSVEKWRNAVFTTKSFFEQLYADTHTFIEQQVEKLGGRDNVCL-IEVGCGTGETIIPLASAAKYCIGIDINEDFIKYSQVQNKA---DNVRFVCGDATKLQELLSTSEVADWAGEPLRKLVICVGNTIGIIPEFLRDSIY-RNMAEVAGDDGACVVIYWNGNCFGEAVQHFYNENPQLCGPFKGKHVDFQACTLQTPSGYNTKWTKPEEARELLQSKGLTTLEVVEQGRGVM 431
[Close]
BLAST of mRNA_Ecto-sp6_S_contig9.18014.1 vs. uniprot
Match: A0A7S3ZFK8_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3ZFK8_9EUKA)

HSP 1 Score: 179 bits (453), Expect = 2.890e-45
Identity = 125/404 (30.94%), Postives = 199/404 (49.26%), Query Frame = 2 
Query:  170 WSLMDAARWHDSMYYEGSYFWQ-LFHDTQVYTRRATSIYCGPPARSFSVEVGCGTGDVILSLASD----FKHSLGIDINDGFLAYAQEQTPKELKDKISFCKGSATDLIDIVSAHPSIDNTSAPTVVTCVNNTIGIFPDAIKARTYSQQMKELAGENGIIIVGFWNGNKFGEALQYFYYKHPELCGSLKGAVIDMEDRHLDTAEGYHTHWTTPEEARRVLEESGFNVLDITEIGVGVLCTCSGGASIPSPRGGGGVATAATFLPHPDTLSEDTLIAEEEAHSLNHYGDRQ-EYFYRELWGGLHQHLGLYEDPATIALPANKR----VVEACENSTVVLFSIAKPTMG----TKAVELGSGYGSGSRYLAVNFGATVDCVDLNRESNDLNRRLTEQAGLSDLVRV 1339
            W  M ++ W  +MY   S+F +    +T    R A     G P     VEVG GTG  +  +  +    FK  +G+D N  F+  A++  P        F  G   +L ++++ + S D   +  VV  VNNT GI P+ ++    ++ M +   ++G+II+G WNGN FG+A+Q+FY ++  LCGSL+GA  D ++  + TA  Y T WT PEE  ++++ES +NVLD+   G  +L           P+               +T  +D    E  A +  +Y       FY+  WGG + H+GLY++   +  P   +    V +A + S   L       MG     +A+++GS YG  +R +A  F   V CVD+++  ND+NR  T +AGL  LV++
Sbjct:   11 WREMSSSHWDQAMYENASFFNRHQVSNTDFIARHAVVNSRGKPI--VGVEVGTGTGKFLKIVLEEHPSLFKRLIGVDFNPNFIETARKAVPDA-----DFTLGDCRELKNVLNDNYSEDMQDSFKVVFSVNNTHGILPEKVRD-DINKAMADTTSDSGMIIIGLWNGNSFGDAVQHFYAQNDHLCGSLQGASFDWDECKMVTASNYTTKWTKPEELGKMIDES-WNVLDVVSSGPMLLIAAK-------PK---------------NTKVQDNASGEAGAETEYYYDTEDASRFYQNFWGGENVHIGLYDN---LEEPNESKDLETVFKASDKSLTRLLDHVYDHMGGLKIRRAMDMGSCYGGCAREMAQRFACEVLCVDMSKVENDINRERTLEAGLEKLVKI 380
[Close]
BLAST of mRNA_Ecto-sp6_S_contig9.18014.1 vs. uniprot
Match: A0A2E5MYM9_9PROT (SAM-dependent methyltransferase n=1 Tax=Magnetovibrio sp. TaxID=2024836 RepID=A0A2E5MYM9_9PROT)

HSP 1 Score: 152 bits (383), Expect = 3.640e-37
Identity = 89/265 (33.58%), Postives = 146/265 (55.09%), Query Frame = 2 
Query: 1031 FYRELWGGLHQHLGLYEDPATIALPANKRVVEACENSTVVLFSIAKPTMGTKAVELGSGYGSGSRYLAVNFGATVDCVDLNRESNDLNRRLTEQAGLSDLVRV--GEPATYFSTGLPAASFGFCFSQDALCHAGRQTSKALEEAARLLAPGGVFACTNILRAEEATNEELEEVLARLQVTSLETHKSFVGHARSAGLEPLESLDKTTSLAVHFKTLLEIAETRKADMLKHTSPEYVDELSKDLRNWLSASNRGVLRWSFFTFRKS 1819
            FY+ +WGG   H+GLY + A     A++R VE      V           T+ +++GSGYG  +RYLA  FG  V C++L+ + N+LNRRLT+ AGLSD +RV  G+         P  ++   ++QDA+ H+G +  + L+E  R+L PGG F  T+ ++ ++  N  L+ +L R+Q++SL +   +     S G +  E L  T  L  H+  + E+ + R  +++K +  +YVD + K L+ W+  ++RG L W    +R S
Sbjct:   20 FYQIVWGGEDIHIGLYFNEADTIADASRRTVEQMATRLVDCKE------ATRVLDIGSGYGGSARYLAGRFGCQVTCLNLSEKQNNLNRRLTKNAGLSDKIRVVYGDFENILE---PDETYQIVWAQDAILHSGNR-KRVLDEVCRVLIPGGQFIFTDPMQTDDCPNGVLQPILDRIQLSSLASPIFYKTELNSRGFKEAEILLLTDHLRKHYWHVREVLKFRYHEVVKFSGQKYVDNMIKGLQYWIDGADRGYLAWGIMDYRFS 274
[Close]
BLAST of mRNA_Ecto-sp6_S_contig9.18014.1 vs. uniprot
Match: UPI001FFC14CC (methyltransferase domain-containing protein n=1 Tax=Synechococcus sp. NB0720_10 TaxID=2907159 RepID=UPI001FFC14CC)

HSP 1 Score: 147 bits (371), Expect = 1.790e-35
Identity = 91/265 (34.34%), Postives = 138/265 (52.08%), Query Frame = 2 
Query: 1031 FYRELWGGLHQHLGLYEDPATIALPANKRVVEACENSTVVLFSIAKPTMGTKAVELGSGYGSGSRYLAVNFGATVDCVDLNRESNDLNRRLTEQAGLSDLVRVGEPATYFSTGLPAASFGFCFSQDALCHAGRQTSKALEEAARLLAPGGVFACTNILRAEEATNEELEEVLARLQVTSLETHKSFVGHARSAGLEPLESLDKTTSLAVHFKTLLEIAETRKADMLKHTSPEYVDELSKDLRNWLSASNRGVLRWSFFTFRKSVA 1825
            FY E+WGG   H+GLY+  A    PA++R V    N+ + L     P  G   V+LGSGYG  +R LA  FGA V+ ++++   N  + +L E+AGL   ++V + A++    LPA      +SQDA+ H+G +  K L+EAARLL PGGV   T+ + A+      L  +L R+ +  L +   +   A  AGL      D+T  L  H+  + E    R+ ++    SPEY+  ++  L +W+    +G L W    FRK  A
Sbjct:   25 FYEEVWGGEDIHIGLYDSDAEAIAPASQRTV----NALIELIGTLPP--GATVVDLGSGYGGAARRLAKEFGARVEAINISAVENARHCQLNERAGLQGQIQVHD-ASFEDVPLPAGCADVVWSQDAILHSGDR-QKVLQEAARLLKPGGVMVLTDPMAADGVEAASLTAILDRIHLPDLGSPDRYQQWAGQAGLVREVWQDQTAMLVRHYSRVREELTRREQELQAKISPEYLQRMAAGLGHWIEGGQQGRLSWGLMRFRKPAA 281
[Close]
BLAST of mRNA_Ecto-sp6_S_contig9.18014.1 vs. uniprot
Match: A0A4R5DIR6_9ACTN (Methyltransferase domain-containing protein n=2 Tax=Jiangella asiatica TaxID=2530372 RepID=A0A4R5DIR6_9ACTN)

HSP 1 Score: 153 bits (387), Expect = 3.950e-35
Identity = 91/261 (34.87%), Postives = 140/261 (53.64%), Query Frame = 2 
Query: 1031 FYRELWGGLHQHLGLYEDPATIALPANKRVVEACENSTVVLFSIAKPTMGTKAVELGSGYGSGSRYLAVNFGATVDCVDLNRESNDLNRRLTEQAGLSDLVRVGEPATYFSTGLPAASFGFCFSQDALCHAGRQTSKALEEAARLLAPGGVFACTNILRAEEATNEELEEVLARLQVTSLETHKSFVGHARSAGLEPLESLDKTTSLAVHFKTLLEIAETRKADMLKHTSPEYVDELSKDLRNWLSASNRGVLRWSFFTFR 1813
            FY  +WGG   H+G Y+D A     A++R V     ST+       P  GT+ +++G+G+G  +RYLA  FG  V C++L+   N  NRRL  Q GL DLV V +  ++        SFG  +SQDA  H+G + ++ L+EA+R+L PGGV   T+ + A++A  + L  +L RL + S+ + + +       G+  +E  D+T  LA H++ +LE  E R  D+    S EY+  +   LR+W+     G L W  F  R
Sbjct:  312 FYATIWGGEDIHVGTYDDAAEDIATASRRTV-----STMAELVDVGP--GTRVLDVGAGFGGAARYLARTFGCRVTCLNLSEIENQRNRRLNRQQGLDDLVDVVD-GSFEDLPFEDRSFGLVWSQDAFLHSGDR-ARVLDEASRVLKPGGVLVFTDPMSADDAAPDALAPILRRLHLESMASPRYYTSQLDRLGMTSVEFHDRTPDLARHYRRVLEETERRGPDLRGLVSDEYLTRMKAGLRHWVDGGLAGHLTWGIFVAR 563
[Close]
BLAST of mRNA_Ecto-sp6_S_contig9.18014.1 vs. uniprot
Match: A9UZS4_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UZS4_MONBE)

HSP 1 Score: 157 bits (398), Expect = 5.350e-35
Identity = 80/226 (35.40%), Postives = 130/226 (57.52%), Query Frame = 2 
Query:  164 GDWSLMDAARWHDSMYYEGSYFWQLFHDTQVYTRRATSI---YCGPPARSFSVEVGCGTGDVILSLASDFKHSLGIDINDGFLAYAQEQTPKELKDKISFCKGSATDLID-IVSAHPSIDNTSAPTVVTCVNNTIGIFPDAIKARTYSQQMKELAGENGIIIVGFWNGNKFGEALQYFYYKHPELCGSLKGAVIDMEDRHLDTAEGYHTHWTTPEEARRVLEESGF 829
            GDWS     +W  +++   S+F  L+ DT  +  +  +    +     +S  +EVGCGTG+ ++      ++ +G+D+N  F+ + ++QT ++   K+ F  G A  L   ++ A+          +VTCV NTIGI PD  K   Y   +K LAG +G+++V +WNGN FGEA+Q+FY+K+P+LCG+  G+ ID+ +  L T  GY T WTTP EA  +++ + F
Sbjct: 1098 GDWSEFSVNKWRSAVFTTKSFFNDLYEDTTAFINKYLAHLDDWFSGADQSCLIEVGCGTGESLIPHYDVARYCIGVDVNQVFVDFCKKQTTEKYAKKVGFACGDAEFLESMLLDANFGSFLNDTKKLVTCVGNTIGIIPDPKKTAIYRAMLK-LAGPDGVVVVVYWNGNCFGEAVQHFYHKNPQLCGTFDGSAIDLVNCSLTTPSGYSTKWTTPAEAETIIKVAIF 1322
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18014.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8H5_ECTSI0.000e+097.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CC57_9STRA2.760e-16849.57S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A6H5KUA7_9PHAE5.580e-13597.26Methyltransf_11 domain-containing protein n=1 Tax=... [more]
A0A835YZA4_9STRA3.110e-4735.98Putative sarcosine-dimethylglycine methyltransfera... [more]
F2UCP4_SALR51.130e-4640.08Methyltranfer_dom domain-containing protein n=1 Ta... [more]
A0A7S3ZFK8_9EUKA2.890e-4530.94Hypothetical protein (Fragment) n=1 Tax=Lotharella... [more]
A0A2E5MYM9_9PROT3.640e-3733.58SAM-dependent methyltransferase n=1 Tax=Magnetovib... [more]
UPI001FFC14CC1.790e-3534.34methyltransferase domain-containing protein n=1 Ta... [more]
A0A4R5DIR6_9ACTN3.950e-3534.87Methyltransferase domain-containing protein n=2 Ta... [more]
A9UZS4_MONBE5.350e-3535.40Predicted protein n=1 Tax=Monosiga brevicollis Tax... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig9contigEcto-sp6_S_contig9:275079..290419 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score1171.4
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D7G8H5
Model size4487
Hectar predicted targeting categoryother localisation
Exons11
EggNOG free text desc.sterol 24-C-methyltransferase activity
EggNOG OGsCOG0500@1,KOG1269@2759
Ec32 ortholog descriptionS-adenosyl-L-methionine-dependent methyltransferase
Ec32 orthologEc-14_003050.1
Cds size1782
COG Functional cat.Q
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig9.18014.1prot_Ecto-sp6_S_contig9.18014.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig9 275131..287766 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350518.4684582-UTR-Ecto-sp6_S_contig9:275078..2751301682350518.4684582-UTR-Ecto-sp6_S_contig9:275078..275130Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig9 275079..275130 +
1682350518.5737815-UTR-Ecto-sp6_S_contig9:287766..2904191682350518.5737815-UTR-Ecto-sp6_S_contig9:287766..290419Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig9 287767..290419 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350518.4811568-CDS-Ecto-sp6_S_contig9:275130..2752701682350518.4811568-CDS-Ecto-sp6_S_contig9:275130..275270Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 275131..275270 +
1682350518.4908085-CDS-Ecto-sp6_S_contig9:276775..2768831682350518.4908085-CDS-Ecto-sp6_S_contig9:276775..276883Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 276776..276883 +
1682350518.502405-CDS-Ecto-sp6_S_contig9:279935..2800801682350518.502405-CDS-Ecto-sp6_S_contig9:279935..280080Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 279936..280080 +
1682350518.5101817-CDS-Ecto-sp6_S_contig9:280544..2806971682350518.5101817-CDS-Ecto-sp6_S_contig9:280544..280697Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 280545..280697 +
1682350518.517775-CDS-Ecto-sp6_S_contig9:281189..2813991682350518.517775-CDS-Ecto-sp6_S_contig9:281189..281399Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 281190..281399 +
1682350518.5254388-CDS-Ecto-sp6_S_contig9:282072..2822911682350518.5254388-CDS-Ecto-sp6_S_contig9:282072..282291Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 282073..282291 +
1682350518.5331972-CDS-Ecto-sp6_S_contig9:283688..2837871682350518.5331972-CDS-Ecto-sp6_S_contig9:283688..283787Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 283689..283787 +
1682350518.5411403-CDS-Ecto-sp6_S_contig9:284586..2850181682350518.5411403-CDS-Ecto-sp6_S_contig9:284586..285018Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 284587..285018 +
1682350518.5490296-CDS-Ecto-sp6_S_contig9:285696..2858161682350518.5490296-CDS-Ecto-sp6_S_contig9:285696..285816Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 285697..285816 +
1682350518.557-CDS-Ecto-sp6_S_contig9:286629..2867421682350518.557-CDS-Ecto-sp6_S_contig9:286629..286742Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 286630..286742 +
1682350518.5651033-CDS-Ecto-sp6_S_contig9:287723..2877661682350518.5651033-CDS-Ecto-sp6_S_contig9:287723..287766Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 287724..287766 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig9.18014.1

>prot_Ecto-sp6_S_contig9.18014.1 ID=prot_Ecto-sp6_S_contig9.18014.1|Name=mRNA_Ecto-sp6_S_contig9.18014.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=594bp
MKTVNNAVGRPLPEAKASKLPRHSKENPDVRHTFDRKGDWSLMDAARWHD
SMYYEGSYFWQLFHDTQVYTRRATSIYCGPPARSFSVEVGCGTGDVILSL
ASDFKHSLGIDINDGFLAYAQEQTPKELKDKISFCKGSATDLIDIVSAHP
SIDNTSAPTVVTCVNNTIGIFPDAIKARTYSQQMKELAGENGIIIVGFWN
GNKFGEALQYFYYKHPELCGSLKGAVIDMEDRHLDTAEGYHTHWTTPEEA
RRVLEESGFNVLDITEIGVGVLCTCSGGASIPSPRGGGGVATAATFLPHP
DTLSEDTLIAEEEAHSLNHYGDRQEYFYRELWGGLHQHLGLYEDPATIAL
PANKRVVEACENSTVVLFSIAKPTMGTKAVELGSGYGSGSRYLAVNFGAT
VDCVDLNRESNDLNRRLTEQAGLSDLVRVGEPATYFSTGLPAASFGFCFS
QDALCHAGRQTSKALEEAARLLAPGGVFACTNILRAEEATNEELEEVLAR
LQVTSLETHKSFVGHARSAGLEPLESLDKTTSLAVHFKTLLEIAETRKAD
MLKHTSPEYVDELSKDLRNWLSASNRGVLRWSFFTFRKSVARK*
back to top

mRNA from alignment at Ecto-sp6_S_contig9:275079..290419+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig9.18014.1 ID=mRNA_Ecto-sp6_S_contig9.18014.1|Name=mRNA_Ecto-sp6_S_contig9.18014.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=15341bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:275079..290419+ (Ectocarpus species6 EcLAC_371)
GAACCACGAATCACTTGCCGAACAAACTGCTCCCCCCCAAAGACCCGGCA
TCATGAAAACCGTTAACAATGCTGTTGGCCGACCTCTCCCGGAAGCCAAG
GCCTCGAAGCTGCCCAGGCACTCCAAGGAGAACCCGGACGTCAGGCACAC
GTTCGACCGGAAAGGAGACTGGAGCCTCATGGACGCGGCGAGGTGAGAGA
GAGAGAGAGCAGAGACGGTTGCTTTTCTCCATGTAGGCCTCACACTCCGC
GCAAGAAGGGCGTGGCAGATGTCACCCGAGGGGAAAAGCTGGAGCGACTT
GGCTGCGAAGACTTTCCATTGTCAGGGATCTGTGATTTGACTACAATATA
ATATACGTCTGTCTGCTACGTGTGTGGGGAGAATGTGCATGCATACGTGT
GGTTTGAATCGTTCTTTCTTGCCGTGGGTGAACAAAATCCCGCAACGTCA
AACAGTATCATTCCTCCTCGGGTTTTTTTAGCCGTAATTTCCTTTCAGCG
CGGAGATTTTCGCGTCCACGTCTGGAACCATCTCCCATCACAGGGAAAAT
GGAGATTTCCTCAAAACCGCTTGCCTGTGGTGGGTCGCCCCTGAGAACCA
TGCAACCTCGGCTCCGGTCTTGGGCTATACTCGGGTTGCAATTCCAGCGC
CCATTGGTGTACGTAATTCATGTAACATTTTGTCACCCTTTCAGTCCACC
CTTGGTTGATCTTGTGACCACGCCGATCTTCGGCCAGCACCACCAGCCCT
CCGGCGGACTCCAGGCTTTTTTCCCTGTGGAATAAGTTCAACAGCACTCT
TTTGAGGCATGCAGACTTTATCCATTAATCGGCTGTTTCCTCTCGGTTGG
CGAGTTACTATTATAGCGTGGTGGCCTTTTGTCCGGCAGAACAGGGCAGT
GGTTGCTGTGAAATTGAAGCGCGTGCCCCGCTCATGTCGGTATAGGGGGC
ACCGGGTAGAAACAAAAACTGTTTTTTTCCCCTTTCCCATGCGAGGTGTG
TTGTGTTATGGCAAGGTTTGCGTTGAGATTCCATGTCAGCGTATTCGGCC
GGGCACCCTGAGTGTGTAGTTGGTGGTTAATGGTCTGTGGCCACCGAGAA
AAGCGTTCACTCAACCATCGTGCTACGTGTGTGTACGAAGCAACTGCGGC
ACGAAACCGCAGCAATACCACAATACAACCACAGAGCGCATGATCATTAG
GAAACATGCGCAGAGGACAGCTTGTGAACGCTTCATCATCGCACAGCATA
GGCTGAAAGTCCAGTCGTTCTTGTGCCCCTCAGGCCGAAACTTCAAGGGT
ACCGTAAGTCTCTCCGAACAGCATGTACTGCTCTCTGTCAAAGATCGGAG
AGGAGGCGGACGAAAGGGCGCCAAGAATGCAAGATCGACACGATCCGTTT
CGCACTCTTGGCACAAGATGGGTGGTTGGTTTCTCACGCGCGATCGAAGA
CGAAGGAAAAAACTGCCCAAGACGGGGACGAGAACACAACAACAGCCATG
GATTACTATTTTGACTTTTGACAGCGCTCTACTGTAGGCTGACTCGTATA
CGTCTGTTTTTTCGAACAGAAGCCCTTTCACCCGGGCCCCCGGACCATTT
GCCGAATTACTAATCGCTCCTCGTTGCTGCTGCTGCTGCTGCTGCTGCTG
CTTCCTTCGCACTTCTGGCTTTCGTCGACAACCCCCGACCCAACCAGGTG
GCACGATTCCATGTACTACGAGGGGAGCTACTTCTGGCAGCTGTTCCACG
ACACGCAGGTCTACACACGTCGTGCCACCTCCATCTATTGCGGCCCCCCG
GCCAGGTACGTGCGTCCCATGATGTGCCTGCTTTGCTTGACCGTTACCGG
ACGGTGACCTTCTCGTGCTACTGCACTAATATTACTTTATTCAGCATTTT
TCTTTTGCTATCGAATTCTTTCTGCGGGCGGGCGTGTGTTGCTCGGTCTG
ACGTGTGAGGGCGGGTGTGCTGCCGTATGTGTGTGATTGTTGGTTTGGGG
ATGATCGGGTGCCACCGGTCACCACTGCTGCACCAGCTGCCTGAGACGTT
CAGATGCGGAAGCGCAAAATGGGTCTTTTTTGCCGAGAAACTTCCTCAAC
GTACAAAATCTACCTGTACACTACGTATGAGGTCAATTTTTCGGCGTTTG
CAGCACCCCTCGCAGTAACCGACCGCTTGCTCCAAAACTGTGGGGTTCCA
AGGTGCAAAGGATATCATGCACGTCCAGGATCCCTAAGTTGTTGTCTTGT
TCACGTTTAGAAAATTATTCCAGTCTCTGGTGCCCAGCACCTTTTAACAT
CACCAGTCCATGACGCTGACGTCGGCGGTAGTCACAGCCCAAATACTGAC
AAAAGGGTACATGCATACTGCGAAGTACTTTACAAGACACCTACCTACGT
ACACAATTATACAAAATGGGATTAGATTTGAAGGGTCTTTCTTGTCCGTT
TCCAAAACAATGTTCCCAACTCGTACTGCTGTATCCTGCAATGACGTCCG
TTTATCTCGGAATGGGAATGCTTGTTTGCGGATCCGACAACGAAAACGCG
TCCGACACCTGTCTTCCGGCGCATGTGTGAGGACGATCTTGCAAAAAAAA
ATCTCAATCGACGCCAGACGTGATCATATTGGGCAGTAAATAGTGTGGGG
CGCACCCAACAACGGTACCGTAAGCAGGTTCTCTTTTGAGTTCACTCGGA
CTGACTTTGACGAGCTTTGCTCAGGGTCGGTGTTTTGTGTTTTCGCCCTA
TTTATTTTGGCGACAGCAGTAGTCCCCCCATTTTTTCGTGGTGAGACGTG
TGGTTCACTTTTCAGCGTATCTATGTATGCATATTTATTTCAGCTTTTGT
GGCTAGAAAAATTCAGTGTAGAGGCATAAAATAGACCCAACATAAGCCCA
GTAACCAGCGGTTTTCTTCCCGTTCACTGTCAAGACTTGATACACGTCTC
AAATGGGCAGTCTCTCTTCGATCGTACTTTCTAAAAGTTTAAAGGCTGTC
GTTGTCACGCTCGCGATGTTGCTACACAGCACAAGGGAGAGTCTTCACAC
CACACACAACGGGCTCCACAGAGTCAAcCCAGGGGCAAAAGAATGCCGTA
CAAAGGGCGGAGAGATGGCACTGGGTGCGaAGAGTGTTTTAAACGTCTTT
TCCTCGGAATGTTTCTCTCACCCCGGTGCGATCTGTCCGACCTGTGCCAT
CTCCCCGCTCCCGGTGCGGAAATGTAATTTAATCGTTCAGCTTTTTGAAG
GCACGGTGCGATCTCTCCGACCGGTGCGATGCGCAATGGTCTACATATAG
ACACAGCCGGTCCACTGGTTCTCGGCGGTGTTTGTATGCACGCCACCCGG
TGCCATCTCCCCGACCGGTACCATCTCTCCACCTCGTACGTAGTATTGCT
ACTATTATTAGTTTACCTACAAGGAGACAAGGGCGTGCGGTGTACGTACC
GTTGTTGCTGGGAGAACACCGGGAACAACTGCAAGACGAAGGCTGGTACG
TGGCAGCTTTGCATGCAGCGAGTGGTCATAGGGTTGAAAGCGACATTTTT
GTTTGTACTGTACGGCGGAACAAGGATACACGCAAACGATGTGGTTTCCA
TCTCAGGAAACGGCACACACGGTATCAGGCTGTTGCCCGCTTCTTCCTCT
ACAATACCGGTACGACCGCAGCAGTCCTTGGAAATCGCGTTGTGTGTAAG
GTTGCGGCTTGTGTGTTGTGTGTGAGGTTGATTGCACGGTTGGCAACTTC
AAACAAACTGACACCCCCGCGTCAACCGAGACCGTACGGAGAGGAGTGGC
GCTCCGCTGACACCGTCTCCACAGGTGAACGGCACGCACATGTACCTCTT
TCCGGCAGATCAAATCACGAGCTCAATCTTTGGATTTGGAGGTGGACGAG
ATCGCCCCGGGTGCGATCTCACCGACCCCACTGCGGGAATCGGATTAAAT
CATGCCGGCCTTGTTTTTTTTTTTGCGCACCCCGGTGTCATCTCTCCGAC
CGATGCCATCTCCCCGACCGTTACCATCTCTCCGCCTTTTACGGCGTGTC
CTCCTCGTGTGCTGTCCAACATCAGCGCGACGAGTAGTAGCAGCGGCAGC
AAGCTGCCACAATTCCGCAAGGATGTAAACCGCGGCATATACCCTCGTTT
TGGTTTTGCGCCCCTCCCACCGAGGTTATGCCGTAGGGTGTTTCCCGCCC
GCGCAGCTCTCAAAGGGCGCATTGGCCGTAGCCCCTTCTCCCATCACAAT
TGCAAACCAGCGCAACCTCAACCACAGACTATTCATTGTTGTGCCGCACT
CTCAACCTCCAACTCTAGGTCGTCTGGTTTTGCTACAAAGCATTTAGGAC
CCTTGATGTTTTTTACTCCCAGGGACTGTTCTCCCAGATTTCTATGGATC
GTTCCGCTCTAAATTTCTGTCTGGGTGTGAGGTCTTGGTGCACAAGTCCG
GTCAGGACTAACCCCTGAAACATTACTGTCCGTTCCAAAACAGTTTTCGC
AACGCCAATTTTATCCCGCAATATTTATGCCCGTTTTTCTTGTCCGGACC
ATTTTTGCTTGTTTACGGATCCGACACGGAAAACGCCATTTGACACCTCT
CTCCCGGCGCATGTGTGATTATGATCTTGCGGTATGTCTTGTTTAGTCGA
CGCCAGGGGTGGTGATATTGAGCAATGTGGGGCGCACCCGGCCACGGTAC
TGTATTCAGCAGTCAAACGCTCCCTGAGGATCGTTTTGTTCGCGAGTGCG
TCCGCGTGGACCCCACGCTTCTTTAATGTCCATGCGGTTCATTCATGTTG
TCGTGTGTtttcTTTTTTTTTTCTACTCCCACTTCCTCGGCTTTGTGACG
ACGACAGGAGCTTCTCCGTCGAGGTTGGTTGCGGGACGGGCGATGTCATC
CTTAGCCTGGCGTCCGACTTCAAGCACAGCCTGGGAATCGACATCAACGA
CGGCTTCTTGGCGTACGCCCAGGAGCAAACCCCAAAGGAGCTCAAGGATA
AGGTATGTGTCATGGGGGGCGGGGGGCTTGGGATAATGCAGGTGTAAGCA
GACGGGGTGGCATGTTTGTTGTTGTTGTCGTTGCTGCTGCCGCTGGTCCC
TTGCAGTTGTTTGGCCCGGCTGGTCGGCATGTGCTCGGTATCGCCGCGGC
TGACGAACGCGTGTGGATTGGTTGATCTCGTCCTTGGTGTCTTGAATACC
CGGGTGCATGGCGTGGCTCGACACATGCCTCGAAGCCTGCTGATCGCGAG
CACAACACTGGCTTTTGCCGACCCGCTCGCCCACGCCCCCCTTACACCCG
GTAGACCAAGCGTGCCGAGCAGCAAACAACACGTGGACGTACGCGGACCG
CGGCCTTTTTCATTTTTCGGATGGTTTGCGCGGTCGATGCAATGCAAACC
AAAAGAAGGGCGCGCACACACGCACAAGCGCCCCCCCCCCCCCTTGTTGT
TCGGTGTGCCGCGCAGATATCGTTCTGCAAGGGGAGCGCGACCGACCTCA
TTGACATCGTCAGCGCCCATCCTTCCATAGACAACACCTCCGCGCCCACG
GTGGTGACGTGCGTCAACAACACCATAGGGATCTTCCCGGATGCGATCAA
AGCCCGCACGTACTCACAGGTGTGTGCCTGCGAGCCTGCCCGCCCGTGTA
GAGCGTTTGTGTTTGCGCGTGGTGGAAGGATGCTGAGGCGTTTTAGGTGC
TTGGTACTGTACGTGCAATTTTTGTTTTTTTCGTGACGACACAGCAGTGG
ATGTGTAGGGCCGATGCGTTGTGAGTTTGGTGATGGTACGAAATTCCACT
AGGGATAATGGTGAAATGTTGAAATATTGAGGGTTCCGGACTCAGGTGTA
TAGCCATGTGTTGGTACGAGATTCCAGGATGAGTATTGGTCAATTGACGA
TAAAAATATAGAAGGCCGTACGATTGCGAGAGATCGCGCCCAAGCGGTGC
AAGACAAAACAGAGGCATCACGTGCACTCTGCTGGGCAGCACGACCTTCT
GTTCGCACCTAGCCAAAGAACGACATCGTGTTTTATTTAGCTCAAAGGAC
TCCCTGCCACTGCCGTTGTCTTCGCGTCCCTCGGGACAATACAAACCAAC
GACGTCGAGAGCAGATGAAGGAGCTTGCTGGAGAGAACGGCATCATCATC
GTCGGATTCTGGAACGGGAACAAGTTCGGAGAAGCCCTGCAGTACTTCTA
CTACAAACACCCGGAGCTGTGCGGCTCGCTGAAGGGGGCCGTGATCGACA
TGGAGGACCGCCACCTCGACACGGCGGAGGGCTACCACACGCACTGGACC
ACCCCCGAAGAGGCTCGCAGGGTGAGCACAGCGTCCATGTTTCTGCTTGT
GGGACTTCGGCATATTCAATATGCCCCCCCCCCGCCCTCTGCTAGCCTGG
TCCAGTGAAACCCGGCGGCTCCGTCCCGGCCTTGTCGGGATGTACACCCC
CCTCTTGCGGTTCTTCTCCGGTGGTTCTTTTCTGGCGTAACTTTTTTTCT
CAACCCTGAGGAGTAGTGCAGGGACTAGATGGGGGCTAGGGTTGTAACAC
GCGCAAGCTTGGCGAGAGTAAGGTAGGTAGAGGCTCTACCTACCTACCTA
CCTTGGGAGAGCGGTTTAGTTCGATCGGATGAGGGTTGGCCAAGGATACG
GTTAGGCGGAGGGAGGGTTGGGTTGCTTGCGGCCTCTGGGCCGCTCCGCT
GAAGAAGCTTGAGAGGTTGAAGACTTCTGGCGGTGCGCATGGCCACAAAT
CGTTTCCCGTTTTTGCAGTTGCGCGGTACAGCTATGCATGCATCATGCAG
AGGCAATCAATCCCACTGTTTGGTTCGAAAGACTTTCGCCCAGTACCTTT
TTTTGTTGTCTTTTCGTGCAAACTTGTGCTCTCGCGTGAGCAAGCTTTCA
AGCGCGCGCTGCCTTCAAAACACTTGGTTTCACGTCATCTACAGCCGTCT
CGTGACTGGTGACTTGACTGTTGACGCTGTGCCCTGTTCGCCAGGTCCTG
GAGGAGAGCGGGTTCAACGTCCTGGACATCACAGAGATCGGGGTGGGCGT
GCTGTGCACCTGCTCCGGCGGCGCGTCCATCCCGAGCCCCAGGGGCGGCG
GCGGCGTGGCGACGGCGGCGACTTTCTTGCCCCACCCAGACACGCTCTCG
GAGGACACCCTCATCGCGGAGGAGGAAGCGCACTCCTTGAACCACTACGG
CGACAGGCAAGAAGTCAAGAGGAGACAGCAGCAGCAGGCACAGAGTAGGC
TGCAAAGAGTCACCCACCCCCTCCCTTATGTGTGTGTGTGTGTGTGTGTG
TTTTATTATTAGCATCGTGTGTGTGACCAATGAAAAGACATGTGCGGTTG
TGCCATGAACTGGGTGTGTGTGTGTGTGTGTGTGTTTGTGTTTGTGTGTC
TCCCCGTATATTATGGACGCCAGTCCTTTCACCGACTCTCGAGGAAAAGG
GGAAGAACAAATCCTGATCCCTGAGATTTGGGGCTGCAATGAGGGCGACG
AAACATAAACCGCCCCTCATCGGGCCGATATTTTGCCGGGGGTATGAGTT
GAAAAATTATAGGTGCCGCATCTGATCATCGATGCCAATATAGGTGGAAA
TTCAACTCTAGAAAGAGCGTGATTTTGAGTGTGATGGCATCACACATAAC
CAGGTTGGCTATTTCCTGTGGTGGTATGTGGTGAGAAATGCCAAGCGGGA
CCGAGCGAACTTGGTCAAGCGAGCTCGGTCGAGCTCGATAGGGTGATTGA
AGGTGGTGAAGAGTTGGGGTGAGCCTTCAGTGAAATACGTAGAGTCCATA
ACCTCCTGGTCAGACACGCCGTGCGACACAAGAGGCGTTTCTAGTGTAAA
TTTTGTTCGTGAGTTGGTCGAGAAGACGAACCGGAATTGGGGTCGCAAAT
GTCAAATTTCACGCGGGTTTTATCACGTGGCTCGCGCTCACCTGTTTTTT
CTGGGGAAAAAAAGAACATGTTTTCTGGGGCATGATTCGAAACCACAGCA
AGGCCGAACGGGTTGTGGTCATAACATAAAACTAGCGACTAGTTTTTCAG
TGGTCGAACGGTGATCTTGCCTTGCTGTAAGAGGTTTGAAGACCTTGCTG
CAACATTTCATTGCACTGGACGAAAAGACGCAGAAAGCAACTGTCGCGAG
AAGGAAGCAAAAACATTCCTTCCCCTCGTCGACCGCGAGTGAATGTCAAT
TCTGTTGCGGCGGACGCACAAAATTACAAAATTATTCTCCTTTTCACTTT
TTTTTTGTTTTCTTTATTACTTTGAGTGAGCGTCCACAGCAATTCTGCGG
GGTAGGACTCCATTCCGTGGACACAGAAGAGGTTCCTCTCCGAGAGACCA
GATTGTTCTTGGGCATATTTCGAAAAACGAATATTTGTTCATGTGACTGA
GCCGAGACTCGAACACAAGTTCCAAACCCCAGAAAGTTGCATAAGTCACA
CACCATTACAGCAGTACTCGAGCCACTCCTCTGTGGCTAGCTACTCCCGT
GCGATCGTTGACGAAACCGTTTGGTGCTTGGCCGCCGTCTTATGCTTGCG
TGCGACCCCAACCTTGCCGCGGCAACCGGCGACCGGTCCCGCTCTTGCAG
CTTCACGCAGTACTTCTACCGCGAGCTCTGGGGCGGGCTCCACCAGCACC
TGGGCTTGTACGAGGACCCCGCGACGATCGCCCTGCCCGCCAACAAGAGG
GTGGTGGAGGTATGTACTTGATTTACGAAGATAATAGCCCAGCGTGGTAT
CATAGTGCGCCAGTGGTGGTGGTGTTGCGTAGGTACGCGTTTCAGATTGA
GGTCGTGCATATGCCGGCGCAACAATTTTTCACTTCTGCTTGAGGTGTTT
CGTGGCAGTTGACTCTCGTACGCATGGCCTGCGGGAGGGGAGGTAGTGAC
GATCCAGTCGGAATAGGGAGGTGGCTGTCCTTTTCCGTGGGTGCAATAGC
TAGCCGGGCGCCCCGGTGGTCTAGTTGGTATCCTCGAAACCTTCTTGAGG
TCAGGTCAGGGGTTCGAATCCCGGCGTAGGCGAGCTTTTCTTGCAAAGTG
AGTTTTTCTCTCGCTTCCGCTCCTGGCCTAGTGGATAGCGCTAGTTCGTG
TGTACACAGAGGGAAGAAAGTGCTGAACTCTTCTCGCATTAAAAATCGAA
GGAAACGTACCGCAGGAGGGGAGGGCAGAGAGGGGCCCTTCTGTGTGACC
ACGGGTTGGAGTAAACGGCACTAGTACTGTGAGCGCTGATTTGAAGTGAA
GACAAATAAatATATATATATGTAGTGGAAGCGCGGAAGCTTGTTCCATG
AAATAGCAGCAAGTCAAGGTTTGTGTCCGTGGTAGTGTCGGGAGCTTGCA
TTTGCTTGAGAACCCTACCGCCGTAGTTCTAGAGAACAAACTTGCGGCAA
CACGTGTTTGCTGTCGACTTCCTCTTGAGATAGCAAGCTGAGACCACCTT
CAAACAAGGTACTCTCGCGTCCCAAGCCTGACCCCCCCCCCCCCCCCCCC
ACTAACAGGCGTGCGAAAACAGCACCGTCGTCCTCTTCTCCATCGCCAAG
CCCACCATGGGCACCAAGGCCGTCGAGCTCGGCTCCGGGTACGGATCGGG
CTCGCGGTACCTCGCGGTCAACTTCGGGGCGACGGTGGACTGCGTCGACC
TCAACCGCGAGTCCAACGACCTCAACCGCCGCCTCACGGAACAGGCCGGC
CTGTCCGACCTGGTCAGGGTCGGGGAGCCGGCCACCTACTTCAGCACCGG
CTTGCCGGCGGCGTCGTTCGGCTTCTGCTTCTCGCAGGACGCGCTTTGCC
ACGCGGGGAGGCAGACGTCGAAGGCGCTCGAGGAGGCGGCTCGGCTGCTG
GCCCCCGGAGGCGTTTTCGCCTGCACCAACATCCTCAGGGCGGAGGAGGC
TACGAACGAGGAGCTGGAGGAGGTGCTCGCGCGTCTGCAGGTGGGGTGAA
GGTCCGGGCCGTCATCGTTGGATGATGGTGGTTGTCGTTGTTGTTGGCGT
TGGCTGATGGTACAAGAATGCTCGCGACGGTCTGGTGTGTCTTGCGGAGT
ACCATCCGTTTTTTACACAAGGATGACCTCTTGACTATCTCAACGGAGTA
GTAGCTGCCCGCCGCATCCCCCGTCTGACCTTTTGGTGCTAGCAGTAGGG
TCGGCCTCAACTTTCGCACATTAAGCCCGTACATACACCTGAGCAATGAA
AGAGAGGCCCGGAATCACGTTTTCCATGTCACGGGATCACAGCAGTTTGG
TGGGCTATTGCGTTGGCCGAACTCGCCCGTGGGGATCGTCGAGGGGCCGA
TTTTCTTGTGCGACCTACTTGTAAATGGTGCGAACCGCAGCGCTTGCGAG
GCCGTCGCACGAGATGGCGGCTAGGCAGAGACTTGGTGGGTGAAACAACC
TACTTGCACCACGTTTCTGGGTACATACACTAGATGCATGCCCGAAGAAA
CGAGAAAAAAAAAAACATAGTAAAAACGGTGGTGGTGTACTCCGAATTCT
AACACGCCGGAGAGCGAAATTTGCAGTGGAAGACAATCACAGGGAAGGGA
ATGTGTACTTATGTGCTTGGTTGTTCGACGCGGTTGCGGGCCATCTCTCT
CTTTTCCCTTCTAATCAGGTGACCTCCCTGGAGACGCACAAGTCCTTCGT
GGGGCACGCGCGCTCGGCCGGGCTGGAGCCGCTCGAGTCGCTCGACAAGA
CCACGTCCCTGGCCGTGCATTTCAAGACTCTCCTCGAGGTAATGTTTCGT
TCTACAGCAGTACACTTCTTTGCGTAGTTTTGGTCGTTTTTCTTATTGAA
CGTTTTCGCTTGGTGGCCCTTCCGAGTCTGTTGTCGCTGCTGTCGCTCGT
GGAAGTTAGTAAAGCTGCACGTAAGAGTTGTGTGTTGGAATCGTTCCCGA
TTTTCCTGCGCGTTCCTTTGTCCGCTTTCTAGATGCTGTTGCTTACATCG
CTGCTGTCGTTGTTGGCAATGTTACGGCGACGTCCACGACCGGCAGTGCG
ATGGTTGTGGTGTCGGTGGTGGGACAGCTCTCGAGTAGTTTGTTGAGGGC
TACTGCGCTATCATGTGCTGAGAACTTACGAAGGGGATTGTTCTGGTTTT
TTGTGCCCGAGCACTTGAGGTCGCCCGCAGACGTGGGTCCTCTGGACTGT
GTAGGCTTCGCGAAGTGCCGGATGGAAATGTTTATCTTGTGTTCCTTGCA
GCGTGCTTCGCCGAGACGTATACTACTAGTGAGCACCAACTGCGGGTACT
TTTCGGTGCTGAAGTGCGAGACCGTCGCCGCTGCTGCTGCTGAGGATGAT
CCTGTCGCAACGCGTTTCCCACGGATCATGCCGTCAGGCCAGGCTCACCG
CCTAGTGTGGAGCACGCAGGGTGCAGTTGGGCAAGAAGCGCACGAGAAAG
ATTACTTTTAGCCTTCACCCTGCCTCTTAACATCGTCCACATACATCGCC
GGACACGGTGTGCCTACTCACTCCCTGTCTCTTGACCTACATACCCCCCC
CGGATCCCCTCTCTCTCTCGCTCGGCACCATATCGTGGCCATGTATCGTA
GATTGCGGAAACGCGCAAGGCCGACATGCTGAAGCACACCTCTCCGGAGT
ACGTGGACGAGCTGTCGAAGGACCTTCGCAACTGGCTCTCAGCCTCGAAC
AGGGGTGTGCTCAGGTATGCGTATGCTGCTGCTGCTGCTGCTGCTGCTGC
TGCTGCTCTTGTCGTGTGCAACATGAGAAAGACGTTCCAAAACCTTTTTA
TTGATATACCCAGGGACAAGCATCCTCTGTTATGTTCCAACCACCGGAAA
GACGCGAATTCTGCGGTCACGGGCTCTGCTGTGTACATATGCAAGTTTGT
GTGTGCGAATTGCGTGCGTGTTGGCAACCAGGCATGACTGGCGTGAGAAA
ATTGAGTATGTGCATCAACCACACGGCAGGGGCAAGGCTTGTAGTTGGAA
CTTGTCTTGATTGTTGCGCGCAGACGAAGATTCGGAAGGGAGGGGCGGGT
GGGTGCGTGGTGGTGTTGACGGTTGCTTTTCCTCGTGTTGTTTTCCTGGC
GTTTGGACGCGTGAAAACATCGGTGACGTGGCCGTTGTCCGCTGCCGAAA
CCAACCCCTGCTCGACAACAGCAGTAATCGACCGATCTATCTTCCTACTA
TCCTCGATGCTCCTCGACCATTGGACAGAGTCCTCCTCGTGCTTTGTTTC
AGGAATCGATTAACCATCAACGGCGCAGTCCGGAGGTACATCTCTGTCCA
CAGCCCTCTACGTTGCTTGCGCGCGTGCAGTTTTGCTTCGCGTCTACAGT
GCTGCTGTACTCGGCTGAGCAAACCATTCTTCGCATCTATCGCGCCTTTT
ACTAAGTCGCCGTGGTCTCTAGGCATGAGAATATTTCATGTCTTCCTGTC
GCTGGCATCAATCGCCCCAAGCAGCTATGTACAAGCCGGACTTTCCTTAC
CCTTTTAGCTGGGTGTCGTCTTGCAAGTGCCTCCAAGCCCACCCACCCAC
TCATCCTCCGCCCAGTCGTGCGTACTTGCGTTGTACTTGCTTAGTCGCTT
TCGGTTCCTTTTGGTATCAGAACACGCACCCTCCCCAAGGTCTGACTGCC
TGCCGTCAACACCACCCACCCGCCCACGCACGCATCCACCGCCAGGTGGT
CCTTCTTCACCTTCCGCAAGAGCGTCGCCCGGAAGTGATGCAAGCCAATC
TGTCTGATGCTACCAACTTGAATCTCCGCGCTTGAGGGCTTGGCAGCCCT
GTTGCATGCGCGCACGTGGAAGGAGCATGCGGGTAACGTGCAGTTTTTTT
TTCAGGAACAAGCGTTGCGTGGGCACCGGCTCTGGTCTGGGCTTGCAGTA
GTTTTGGCTTGGCTGGACCGGAGTGCTCGCACAGGCGACTAAAATTGCTT
TGCTACAGCCGGGGAGCGGAAGAGGTAGTCGGCGCGAAAACAATTGCTGG
GAGAGGGAATTTTGTTTGTTGGAACTCGGTCACTTTGACAACAGCAGTAG
ATTGGGCGGACATGAGAGCAACTCTATTTTTTGTAGACAGTGAGAAAAAT
TGCGAGTGAAGCCCGTATCCCTGTCTGGTCCTCGGGGGTCAAATTTTGCA
GAGGGAAGGGTCCTGGCGACTCGGTTGGAAAACTAAACTTTCACGAAATA
GAGGATGATTTTTTGCGAGGATTTAAGATCGATCCTGTCTTTCAAAGTTT
TTGCGGAAAATGTTGCTTGCATGCGTGTGCGTGTACTGCTACGGGGAGGG
GCGTCTCGTGCGAATCACGCGTCGGCAGCTAGCTACTGGTTTGGATGGAG
TGGAGAATCTTACATGAGGCACTGCTTTGTGTAGTTTTGATGCATGACCT
TGGCGGTGTTTTGGCCTCTGGTGGTAGAGCCCGCGTTCTCCCTTTGACGA
CCGGCAGGTGTTGCTGCGGTTGCGGGTAGTTGTGGTTGAATACAGTTTCG
GGGGCGGGGGGGTTGGGGAAGGGAGAGAGAATTGAGACTTGTGGAATAGA
GAACACTAGAGAGGAACAAGAGGAGGGGCAGAGCCCGTGATAGTGTTGAG
CCAGGTTGTTCGTGAAAAGTCTGTCCTTTTGTAGTGGTACACGCCGCATG
TTTTAGTTTTTGTTTATTCCTACATAGGAGCGGACGGGGCGCTGTGGTTT
TGAGCGAGAGACACGAAAGAGTCGGGGTGGTTGTTTTGGACTGGTTTATG
ACAAGCATTGCCACTGTCGGGAAGCTTGCGGGGATTGTTCAAGAGAACAG
AAGGCAGGAGGGAAACTGGTTGGTGTAGATGTTGGGGTCCATGAACAAGC
CGTGTTATATGTTACACACGAGGACGAGCTCTCTTTCATGAGATGAGGGA
ATGTCGGGGGTGTATTGTTTACGGGACAAAAAGCAGGACTTGGCTCGCGG
AGTTGAAATGCACGACTGTGACTGTCGGGAAGCGTGAGAGGTAGCGTGAT
CATTAGAGAAGGAGGCCGGAGGGAGTTCGGCGCTTGTAGGAGATTGGTGT
ACATGTCATGTATGTTTGGGTCTCTTGAATAACCAATGTTGTACGAACAG
GCATTTGCTGGTGATGATCCGGTGTTTGTGGGTGCGTGATGAAGCACCAA
AGAGACGAGGCTGCTTGTAAATGGTAGGTGACGAGACGAGATATCGGGTG
TATACGAAGTATGTTTGAACAAAGGTGAGGAACGACGCGCGGAGTCGAAT
GCATGGCTGTGTAAGCACGGCATATACACATGTAGGTGATACGAGCGAGG
AAGGCTTGGTTCGGGTTGATGGCCGAGAGGGGCAAGCAGGCCTGTTGTTG
TGTTGACGTTTCATGTTGTCGTCATTGTATGTACCAAGTACACTGTTTTT
CGCCAAACCCTCTATTCATACATTCAGAATCAGAGCACCGTCGCCCGTCC
ATCCGTTGAGATGGAGGCGCGGAGCAGCGACAATCTCGGCATATTTTTTA
AGCAGGAGTAGATCTTTGTCGGTGTCGGGCAGTCTCGGGCGGGTTGACAT
GCCACCACGAGAGAGGCAAGTGGCGGGTGGGACTTTTTCAGGGAGAGGAG
CATTGCCGTAATGCCCTGTGAGGGGGGGGGCGGGATGAGGAACCGCGTGT
GTGTATGTGGTACCATGTTCCCGACGAAGGAAGGAAGCAAGTGCCATAGC
GGAGAAAACAGCCTTGAAGGCGGGGCGCTTGGCTAGAGACCGGGTGGGCG
TCCCCCACGCCTTTGAGCCAAGCGAAAGGGTCATCAAGCGTCTTGGTAGG
TAAGTTTGAACGAACAGCTGACCAGAAGAGGCACCGACTTGAGAGACGAG
CGAAGTGTCATATGCTCCTGCACTTGGTGGTGCGCACGCTACTTTTGTGC
TTGAAGTTGCGTGAACCAGCAATAATGTGAGGCATTGGATGAGAGGTAGT
TTAGGCTTACGCACGGTGTATCCTGGCGTTTACTCGCGTAGGGTACGTTT
TTTTACGTTGTTGCTTGTATTCTGTGTTTGTTTACAATTGGCACGCGTTG
AACGTCGAATGTCAGCACGCGTAGGAAGGTTGAGGCGGGGCGATACTTAC
TTGCTGTAGAATCGCCACTAAACGGTGGCGTGATGCACAGCCAGCGCGTT
CCCGAAGGCAGGCAGGCACGTTTTGATACGTACATGCGTCCTTTGGTGAT
TATATTAGTCGCGAATAATACCAATAGAGCGCTGTGTGAGGGAAGTGACT
GTACGCAGCAATCTTTGTCGTCGGTGACGATCAATACCTGCAGATGACAG
GGCAACGAGGAAGCACGCAGAAGCCAAGTCTTGCGCAAGGCAAAAAGGGC
CGAACAACAACAATAatGGGATTGCCGACAAAtgAATGAAC
back to top

Coding sequence (CDS) from alignment at Ecto-sp6_S_contig9:275079..290419+

>mRNA_Ecto-sp6_S_contig9.18014.1 ID=mRNA_Ecto-sp6_S_contig9.18014.1|Name=mRNA_Ecto-sp6_S_contig9.18014.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1782bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:275079..290419+ (Ectocarpus species6 EcLAC_371)
ATGAAAACCGTTAACAATGCTGTTGGCCGACCTCTCCCGGAAGCCAAGGC
CTCGAAGCTGCCCAGGCACTCCAAGGAGAACCCGGACGTCAGGCACACGT
TCGACCGGAAAGGAGACTGGAGCCTCATGGACGCGGCGAGGTGGCACGAT
TCCATGTACTACGAGGGGAGCTACTTCTGGCAGCTGTTCCACGACACGCA
GGTCTACACACGTCGTGCCACCTCCATCTATTGCGGCCCCCCGGCCAGGA
GCTTCTCCGTCGAGGTTGGTTGCGGGACGGGCGATGTCATCCTTAGCCTG
GCGTCCGACTTCAAGCACAGCCTGGGAATCGACATCAACGACGGCTTCTT
GGCGTACGCCCAGGAGCAAACCCCAAAGGAGCTCAAGGATAAGATATCGT
TCTGCAAGGGGAGCGCGACCGACCTCATTGACATCGTCAGCGCCCATCCT
TCCATAGACAACACCTCCGCGCCCACGGTGGTGACGTGCGTCAACAACAC
CATAGGGATCTTCCCGGATGCGATCAAAGCCCGCACGTACTCACAGCAGA
TGAAGGAGCTTGCTGGAGAGAACGGCATCATCATCGTCGGATTCTGGAAC
GGGAACAAGTTCGGAGAAGCCCTGCAGTACTTCTACTACAAACACCCGGA
GCTGTGCGGCTCGCTGAAGGGGGCCGTGATCGACATGGAGGACCGCCACC
TCGACACGGCGGAGGGCTACCACACGCACTGGACCACCCCCGAAGAGGCT
CGCAGGGTCCTGGAGGAGAGCGGGTTCAACGTCCTGGACATCACAGAGAT
CGGGGTGGGCGTGCTGTGCACCTGCTCCGGCGGCGCGTCCATCCCGAGCC
CCAGGGGCGGCGGCGGCGTGGCGACGGCGGCGACTTTCTTGCCCCACCCA
GACACGCTCTCGGAGGACACCCTCATCGCGGAGGAGGAAGCGCACTCCTT
GAACCACTACGGCGACAGGCAAGAATACTTCTACCGCGAGCTCTGGGGCG
GGCTCCACCAGCACCTGGGCTTGTACGAGGACCCCGCGACGATCGCCCTG
CCCGCCAACAAGAGGGTGGTGGAGGCGTGCGAAAACAGCACCGTCGTCCT
CTTCTCCATCGCCAAGCCCACCATGGGCACCAAGGCCGTCGAGCTCGGCT
CCGGGTACGGATCGGGCTCGCGGTACCTCGCGGTCAACTTCGGGGCGACG
GTGGACTGCGTCGACCTCAACCGCGAGTCCAACGACCTCAACCGCCGCCT
CACGGAACAGGCCGGCCTGTCCGACCTGGTCAGGGTCGGGGAGCCGGCCA
CCTACTTCAGCACCGGCTTGCCGGCGGCGTCGTTCGGCTTCTGCTTCTCG
CAGGACGCGCTTTGCCACGCGGGGAGGCAGACGTCGAAGGCGCTCGAGGA
GGCGGCTCGGCTGCTGGCCCCCGGAGGCGTTTTCGCCTGCACCAACATCC
TCAGGGCGGAGGAGGCTACGAACGAGGAGCTGGAGGAGGTGCTCGCGCGT
CTGCAGGTGACCTCCCTGGAGACGCACAAGTCCTTCGTGGGGCACGCGCG
CTCGGCCGGGCTGGAGCCGCTCGAGTCGCTCGACAAGACCACGTCCCTGG
CCGTGCATTTCAAGACTCTCCTCGAGATTGCGGAAACGCGCAAGGCCGAC
ATGCTGAAGCACACCTCTCCGGAGTACGTGGACGAGCTGTCGAAGGACCT
TCGCAACTGGCTCTCAGCCTCGAACAGGGGTGTGCTCAGGTGGTCCTTCT
TCACCTTCCGCAAGAGCGTCGCCCGGAAGTGA
back to top