mRNA_Ecto-sp6_S_contig9.17998.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig9.17998.1 vs. uniprot
Match: A0A6H5JY65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY65_9PHAE) HSP 1 Score: 680 bits (1755), Expect = 3.430e-224 Identity = 353/503 (70.18%), Postives = 398/503 (79.13%), Query Frame = 3
Query: 3 RFSGNTFSCENGKVLTYENGNRYAAVCDGCPVD-SYWLGLVEDEEKVPSKCVEQPEHTRNPDGDATIETLLLDRGYWRTTNDSVNVLACYNEDACKGGRTDDPAFCKLGYEG---------------------ADNRGIIAILAIGGVVVLGAAAAVCMNLLSGDMDGTRRGVIHRFTERLPLPSFKIVVVAWQIVTQFATLANVTYPDMYQRFLDGVGILNFDVLWIPSAGCIVDVDFHDRLLVSTMGPLVVLALLARTYIVAKRRNCVSRAALQKVGQKHMSMVLLISFLVYSSVSTTVFQAFACEGLDDGVAYLRVDYRIECDSSKHRAFQVLAGFMILVYPVGIPLFYAYLLYKHRRVLKGEDEVARETSSEAQSISDLWTPYKPGRFYYEVIECLRRMSLTGVVVFIYPNTAAQVAVTLVIAFSFVVVSERFAPYVSKWDSCISLTGHIIVFMSMYVALLSKVDVSEERPVSQNMLGRTLVAAHACLVVAVVVETLVI 1445
RFSGN SCENG L +G+RY VCDGCPV+ S W+ VE+ ++VP CV Q +HTR+ GD TIETL L GYWR TNDS NVLACYNEDAC GG T+DPAFC+ GYEG D+ G IAI+ + GV VLGAA A+CM+L+SG+M+G RRGVIHR +RLPL S KIVVV WQI+TQF+++ANVTYPD+YQRFLDGV ILNFDVLWIPSAGC+V+VDFH RLLV+T+GPLV LALLA TY VAKRR+ S AALQK+ KHMSMVLLI+FLVYSSVS TVFQ+FACE LDD YLR DYRIECDSS+H+AFQV AG MILVYPVGIPLFY YLLYKHRRVLK ED R+TS + Q ISDLW PYKPGRFYYEVIEC+RRMSLTGVVVFIYPNTAAQVAVTL+IAFSFVV S APYVSKWD+ ISL GH+IVF SMY ALLSKVDVS+ER SQ + LVAAHAC+VVAVVVET+VI
Sbjct: 1251 RFSGNVLSCENGMYLDSVDGDRYQTVCDGCPVNNSDWIVSVENGDRVPI-CVVQLDHTRSEGGDTTIETLELSSGYWRATNDSANVLACYNEDACVGGMTNDPAFCQRGYEGPYCSVCSEGYSMSLAFTCTECVDDHGGIAIMVVVGVFVLGAAIALCMHLVSGEMEGARRGVIHRVVKRLPLQSIKIVVVVWQILTQFSSVANVTYPDVYQRFLDGVNILNFDVLWIPSAGCLVEVDFHGRLLVATIGPLVALALLAITYTVAKRRSSGSEAALQKIRHKHMSMVLLITFLVYSSVSATVFQSFACEDLDDHKKYLRADYRIECDSSEHQAFQVFAGIMILVYPVGIPLFYGYLLYKHRRVLKSEDAGKRQTSPQVQPISDLWFPYKPGRFYYEVIECVRRMSLTGVVVFIYPNTAAQVAVTLMIAFSFVVTSVVLAPYVSKWDASISLVGHVIVFTSMYTALLSKVDVSDERADSQEVFAGVLVAAHACMVVAVVVETIVI 1752
BLAST of mRNA_Ecto-sp6_S_contig9.17998.1 vs. uniprot
Match: D7G301_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G301_ECTSI) HSP 1 Score: 492 bits (1266), Expect = 1.350e-156 Identity = 261/508 (51.38%), Postives = 335/508 (65.94%), Query Frame = 3
Query: 6 FSGNTFSCENGKVLTYE-NGNRYAAVCDGCPV--DSYWLGLVEDEEKVPSKCVEQPEHTRNPDGDATIETLLLDRGYWRTTNDSVNVLACYNEDACKGGRTDDPAFCKLGYEG---------------------ADNRGIIAILAIGGVVVLGAAAAVCMNLLSGDMDGTRRGVIHRFTERLPLPSFKIVVVAWQIVTQFATLANVTYPDMYQRFLDGVGILNFDVLWIPSAGCIVDVDFHDRLLVSTMGPLVVLALLARTYIVAKRRNCVSRAALQKVGQKHMSMVLLISFLVYSSVSTTVFQAFACEGLDDGVAYLRVDYRIECDSSKHRAFQVLAGFMILVYPVGIPLFYAYLLYKHRRVLKGEDEVARETSSEAQSISDLWTPYKPGRFYYEVIECLRRMSLTGVVVFIYPNTAAQVAVTLVIAFSFVVVSERFAPYVSKWDSCISLTGHIIVFMSMYVALLSKVDVSEERPVSQNMLGRTLVAAHACLVVAVVVETLVICCSM 1457
FSGN F C+ G L Y +GN Y A C GC D + E VP C + EH + G T+E L ++RGYWR + S V ACYN DAC GG T +C GYEG + G IA+ A+ VVVL A AV +SG + R GV+ R + +PL S KIV+VAWQI+TQF ++ANVTYPD+Y+RFLDG+ + NFD+ W+ SAGCI D+DFHDRLL ST+ P++ L LA TY A N +LQ + KH+S+VLL++FL+YSSVS T+F+AF CE L+DG YLR DY I+CDSSKH+AFQV AGFM++VY VGIP YA+LL++ R VLK + RE ++ S SDLW PYKP FYYEVIEC RR+ L GVVVFI+PNTAAQ+A+TL++AF+FV+VSE AP+ SKWD+ ++ TGH +VF+SMY+ALL KVDVS ER SQ + LVAAHAC+++AV+ ET V+ S+
Sbjct: 735 FSGNVFDCDPGMYLDYNASGNPYEAACGGCETACDGCFF-----EPPVPPTCTDVMEHITSAGGTVTLEDLPVERGYWRASPSSEEVFACYNSDACLGGVTGRAGYCLKGYEGPYCAVCSDGYTTELAFACTRCSGGAGRIALAAVLAVVVLCVAFAVASYAMSGRVGDVRSGVVARLGQYIPLQSVKIVIVAWQILTQFTSVANVTYPDVYKRFLDGLDVFNFDLSWVLSAGCIFDIDFHDRLLASTVSPVIGLLFLAGTYAAAVSMNRGKAESLQVIWNKHVSLVLLLTFLIYSSVSATLFKAFVCEELEDGTNYLRADYTIDCDSSKHKAFQVYAGFMVVVYVVGIPALYAFLLFRDRHVLK-DHHADREQTARTTSTSDLWKPYKPSVFYYEVIECGRRVLLAGVVVFIFPNTAAQIAITLMMAFAFVMVSEGLAPFASKWDAWLNRTGHTVVFVSMYIALLLKVDVSGERAGSQRVYEIVLVAAHACMILAVMTETFVLTWSL 1236
BLAST of mRNA_Ecto-sp6_S_contig9.17998.1 vs. uniprot
Match: D7FHH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH1_ECTSI) HSP 1 Score: 462 bits (1188), Expect = 2.550e-147 Identity = 258/529 (48.77%), Postives = 324/529 (61.25%), Query Frame = 3
Query: 6 FSGNTFSCENGKVLTYENGNRYAAVCDGCPVDSYWLGLVEDEEKVPSKCVEQPEHTRNPDGDATIETLLLDRGYWRTTNDSVNVLACYNEDACKGGRTDDPAFCKLGYEGADNRGIIAILAIGGVVVLGAAAAVCMNLLSGDMDGTRRGVIHRFT-------------------------ERLPLPSFKIVVVAWQIVTQFATLANVTYPDMYQRFLDGVGILNFDVLWIPSAGCIVDVDFHDRLLVSTMGPLVVLALLARTYIVAKRRNCVSRAALQKVGQKHMSMVLLISFLVYSSVSTTVFQAFACEGLDDGVAYLRVDYRIECDSSKHRAFQVLAGFMILVYPVGIPLFYAYLLYKHRRVLKGEDEVARETSSEAQSISDLWTPYKPGRFYYEVIECLRRMSLTGVVVFIYPNTAAQVAVTLVIAFSFVVVSERFAPYVSKWDSCISLTGHIIVFMSMYVALLSKVDVSEERPVSQNMLGRTLVAAHACLVVAVVVETLVICC-SMGRNEDRSIEMVSGPGSIAR 1514
FSGN F+C L Y +G+ C GC G V+ V C + H+R+ G T+ETL +D GYWR TN S VLACYN DAC GG T +C GYEG AI + LG + C N G + T VI FT LPL + KI+VVAWQIVTQF + ANVTYPD+YQRFL+G+ + NFD+ W+ SAGC++D+DFHDRLL+ST+GP++ L LA TY R N + A LQ V +H+SMVLL+ FLVYS VS+ VFQ FAC+ L+ G YLR DYRIECDSSKH+ F+V AGFMIL+YPVGIP FY LL + R VL+ +D RE SIS+LW PY+P +YYEVIEC RR+ LTG+VVFIYPNTAAQ+A+TL++ F V+SE PY WD+ +S H +VFMS+YVALL KVDVS E+ SQ + LVAAHAC+++AVVVET+++ C S + +D V G R
Sbjct: 498 FSGNVFNCAPDTFLNYTSGDALDEACSGCQTTCD--GCVQPP--VVPLCSDVIPHSRSDGGLVTLETLSIDPGYWRATNSSTEVLACYNVDACVGGITGATEYCVEGYEGP----YCAICSDDYSAQLGFTCSKCPNRAGGILLATALAVIGLFTVVAVVSYVAWRVDPNTGCAMAGHLKRYLPLQTLKILVVAWQIVTQFTSAANVTYPDVYQRFLNGLDVFNFDISWVLSAGCVMDLDFHDRLLLSTIGPIMALLFLAATYRAGSRINRGNAATLQLVWDRHVSMVLLLVFLVYSGVSSVVFQTFACDQLEGGGEYLRADYRIECDSSKHQGFRVYAGFMILLYPVGIPAFYGALLLRDRDVLE-KDPDGREDPPRVASISNLWQPYRPSVYYYEVIECGRRILLTGLVVFIYPNTAAQIAITLIMTVVFAVLSEALRPYAQAWDTWVSRVSHAVVFMSVYVALLLKVDVSNEKGSSQKVFEAVLVAAHACMILAVVVETILLGCPSRVKEQDEPAPRVGGDSVTMR 1017
BLAST of mRNA_Ecto-sp6_S_contig9.17998.1 vs. uniprot
Match: D8LSC0_ECTSI (Polymorphic Outer membrane protein G/I family n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LSC0_ECTSI) HSP 1 Score: 473 bits (1218), Expect = 6.660e-147 Identity = 247/502 (49.20%), Postives = 325/502 (64.74%), Query Frame = 3
Query: 6 FSGNTFSCENGKVLTYE-NGNRYAAVCDGCPVDSYWLGLVEDEEKVPSKCVEQPEHTRNPDGDATIETLLLDRGYWRTTNDSVNVLACYNEDACKGGRTDDPAFCKLGYEG---------------------ADNRGIIAILAIGGVVVLGAAAAVCMNLLSGDMDGTRRGVIHRFTERLPLPSFKIVVVAWQIVTQFATLANVTYPDMYQRFLDGVGILNFDVLWIPSAGCIVDVDFHDRLLVSTMGPLVVLALLARTYIVAKRRNCVSRAALQKVGQKHMSMVLLISFLVYSSVSTTVFQAFACEGLDDGVAYLRVDYRIECDSSKHRAFQVLAGFMILVYPVGIPLFYAYLLYKHRRVLKGEDEVARETSSEAQSISDLWTPYKPGRFYYEVIECLRRMSLTGVVVFIYPNTAAQVAVTLVIAFSFVVVSERFAPYVSKWDSCISLTGHIIVFMSMYVALLSKVDVSEERPVSQNMLGRTLVAAHACLVVAVVVETLVI 1445
FS N F C +G L Y + + + AVC+GC + +G + + C + EH+ + DG T+ETL + GYWR T VLACY+ DAC GG T +C GYEG +DN G IA+ A VV L AV + SG+ +G RG++ R +PL S KIVVVAWQI+TQF +ANVTYP +YQ FL+G+ + NFD+ W+ SAGC+VDVDFHDRLL++T+GP+ LL TY A R + + L+ V KH+ MVLL++F VYSSVS T+F+ FACE L+DG YL DYRIECDSSKH+ F+V AGFM+L+Y GIP Y++LL++ R VLKG + ++ S A S SDLW PYKP FYYEV+EC RR+ L GVVVFIYPN++AQ+A+TL++AF+FV++SE APY S+WD+ I+ GH++V SMY+ALL KVDVS+ER SQ + LV AH +VV V ETLV+
Sbjct: 1089 FSANGFDCPSGTFLGYNASADLFEAVCNGC--QTACVGCAFADPLLVPTCTDLLEHSTSSDGRDTLETLSIQAGYWRATTSGTEVLACYHADACLGGVTGTSGYCLEGYEGPYCAICSEGYSAQMSFTCRTCSDNAGGIALAAALAVVGLVLLVAVVSYVSSGERNGKGRGIVERVGRYIPLQSVKIVVVAWQIMTQFTNVANVTYPHVYQNFLNGLEVFNFDLSWMLSAGCVVDVDFHDRLLMATIGPIFAALLLVCTYAAAVRIHRGATETLENVRHKHVFMVLLLTFFVYSSVSATLFRTFACETLEDGKTYLLADYRIECDSSKHKRFEVYAGFMVLLYTAGIPALYSFLLFRDRDVLKGREAAGQDLRSRATSTSDLWKPYKPSVFYYEVVECARRVLLAGVVVFIYPNSSAQIAITLIVAFTFVLISEGLAPYASRWDTWINRMGHVVVVASMYLALLLKVDVSKERSSSQGVFEAVLVVAHVVMVVVXVAETLVL 1588
BLAST of mRNA_Ecto-sp6_S_contig9.17998.1 vs. uniprot
Match: D7G2Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z8_ECTSI) HSP 1 Score: 459 bits (1182), Expect = 1.960e-146 Identity = 246/500 (49.20%), Postives = 318/500 (63.60%), Query Frame = 3
Query: 6 FSGNTFSCENGKVLTYE-NGNRYAAVCDGCPVDSYWLGLVEDEEKVPSKCVEQPEHTRNPDGDATIETLLLDRGYWRTTNDSVNVLACYNEDACKGGRTDDPAFCKLGYEG---------------------ADNRGIIAILAIGGVVVLGAAAAVCMNLLSGDMDGTRRGVIHRFTERLPLPSFKIVVVAWQIVTQFATLANVTYPDMYQRFLDGVGILNFDVLWIPSAGCIVDVDFHDRLLVSTMGPLVVLALLARTYIVAKRRNCVSRAALQKVGQKHMSMVLLISFLVYSSVSTTVFQAFACEGLDDGVAYLRVDYRIECDSSKHRAFQVLAGFMILVYPVGIPLFYAYLLYKHRRVLKGEDEVARETSSEAQSISDLWTPYKPGRFYYEVIECLRRMSLTGVVVFIYPNTAAQVAVTLVIAFSFVVVSERFAPYVSKWDSCISLTGHIIVFMSMYVALLSKVDVSEERPVSQNMLGRTLVAAHACLVVAVVVETL 1439
FS N + C+ G L E +G Y A+CDGCPV+ G +E ++ KC + EH+ + G T++ L+++ GYWR T S NVL CYN DAC GG T ++C GYEG +D G IA+ V L A+ +SG+ +G RGV+ R +PL S KIV+VAWQI+TQF ++AN+ +P +YQRFLD + + NFD+ W+ SAGC+ DVDFHDRLLVST+ P+V L LA Y A R + S LQ+V KH+S+VLL++FLVY+SVS +FQ FACE LDD YLR DYRIECDS KH AFQV AGFMI++Y VGIP Y L++ VL+ DE RE + +DLW PY+P FYYEVIEC RR+ L GVVVFIYPNTAAQ+AV L+IA F ++SE APY S+WD+ + GH +V +SMYVALL KVDVS+ER SQ + LVAAH C+V V++E +
Sbjct: 455 FSRNVYGCQEGMFLECEESGTLYEAICDGCPVECE--GCSFEEPQLVPKCSDALEHSNSSGGTVTLDALVIEPGYWRATPSSENVLECYNADACLGGVTGSESYCLEGYEGPYCAVCSGGYTARLGMACSKCSDRAGSIALGVSVSVAGLLFTVALVSYAVSGESEGRARGVVERTGRFVPLQSVKIVIVAWQILTQFTSVANIRFPHVYQRFLDALELFNFDLGWVLSAGCVFDVDFHDRLLVSTIAPIVGLLFLAAVYAAAARNSHRSSEDLQRVWHKHVSLVLLLTFLVYASVSAVLFQTFACEELDDRKNYLRADYRIECDSPKHSAFQVYAGFMIVLYTVGIPALYGGFLFRDSDVLR-RDEADREQLARIAPTADLWKPYRPSVFYYEVIECARRVLLAGVVVFIYPNTAAQIAVALLIAVVFAMISEALAPYASRWDTWLCRMGHAVVAVSMYVALLLKVDVSDERASSQRVFESLLVAAHVCMVGVVLLEVI 951
BLAST of mRNA_Ecto-sp6_S_contig9.17998.1 vs. uniprot
Match: A0A6H5K0E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E9_9PHAE) HSP 1 Score: 461 bits (1185), Expect = 5.340e-143 Identity = 251/520 (48.27%), Postives = 335/520 (64.42%), Query Frame = 3
Query: 6 FSGNTFSCENGKVLTYENG-NRYAAVCDGCPVDSYWLGLVEDEEKVPSKCVEQPEHTRNPDGDATIETLLLDRGYWRTTNDSVNVLACYNEDACKGGRTDDPAFCKLGYEGA----------------------DNRGIIAILAIGGVVVLGAAAAVCMNLLSGDMD-GTRRGVIHRFTERLPLPSFKIVVVAWQIVTQFATLANVTYPDMYQRFLDGVGILNFDVLWIPSAGCIVDVDFHDRLLVSTMGPLVVLALLARTYIVAKRRNCVSRAALQKVGQKHMSMVLLISFLVYSSVSTTVFQAFACEGLDDGVAYLRVDYRIECDSSKHRAFQVLAGFMILVYPVGIPLFYAYLLYKHRRVLKGEDEVARETSSEAQSISDLWTPYKPGRFYYEVIECLRRMSLTGVVVFIYPNTAAQVAVTLVIAFSFVVVSERFAPYVSKWDSCISLTGHIIVFMSMYVALLSKVDVSEERPVSQNMLGRTLVAAHACLVVAVVVETLVICCSMGRNEDRSIEMVS 1493
F GN F C G + + A+C+GC ++ G V E + C E +H+ + G+ T++TL +DRG+WR + S VLACY+ DAC GG T +C+ GYEG ++ G IA+ + ++++ A AV + SG++ G + G++ T +PL S KIV+V+WQI+TQF ++ANVTYPD+YQ LD + + NFD+ W+ SAGC+VD++FH RLLVST+ P+V L LLA TY A R N L + KH+++VLL++F VYSSVS+T+F+AFAC+ LD YLR DY IEC+SS+HR QV AGFMI++Y VGIP YA LL+K R VLK ED RE +SIS+LW PYKP FYYEVIEC RR+ L GVVVFIYPNTAAQ+AVTL+IAF+F ++SE APY S+WD+ IS GHI+VF+SMYVALL KVDVS+ER SQ + LVA H C+++ V+VE V S+ R E RS+ S
Sbjct: 988 FDGNGFDCPAGTFRNVTGSVDHFEAICNGC--ETTCDGCVFAEGSLAPICTEVMDHSTSDGGNVTLQTLSIDRGFWRASTSSTEVLACYHADACLGGVTGASGYCEEGYEGPYCGICSDGYTEQLSFACSKCSENSAGGIAVAVVLALLIVFLAVAVVSYVTSGEVGMGRKGGIVELVTRYIPLQSLKIVIVSWQILTQFTSVANVTYPDVYQDLLDVLDVFNFDLSWLLSAGCVVDMNFHGRLLVSTISPIVALLLLACTYAAAARINRGEPEKLNIIWNKHVTVVLLLTFFVYSSVSSTLFRAFACDDLDYSKDYLRADYSIECNSSEHRGIQVYAGFMIVIYTVGIPALYAELLFKSRDVLKDEDP-DREEPPRVKSISNLWEPYKPAVFYYEVIECFRRVLLAGVVVFIYPNTAAQIAVTLLIAFAFALLSEGLAPYASRWDTWISRVGHIVVFLSMYVALLLKVDVSDERASSQEVFESVLVAVHVCMILFVLVEAAVQAWSL-REERRSLSAAS 1503
BLAST of mRNA_Ecto-sp6_S_contig9.17998.1 vs. uniprot
Match: D7G5Y7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y7_ECTSI) HSP 1 Score: 467 bits (1201), Expect = 9.300e-143 Identity = 256/508 (50.39%), Postives = 326/508 (64.17%), Query Frame = 3
Query: 6 FSGNTFSCENGKVLTYE-NGNRYAAVCDGCPVDSYWLGLVEDEEKVPSKCVEQPEHTRNPDGDATIETLLLDRGYWRTTNDSVNVLACYNEDACKGGRTDDPAFCKLGYEG---------------------ADNRGIIAILAIGGVVVLGAAAAVCMNLLSGDMDGTRRGVIHRFTERLPLPSFKIVVVAWQIVTQFATLANVTYPDMYQRFLDGVGILNFDVLWIPSAGCIVDVDFHDRLLVSTMGPLVVLALLARTYIVAKRRNCVSRAALQKVGQKHMSMVLLISFLVYSSVSTTVFQAFACEGLDDGVAYLRVDYRIECDSSKHRAFQVLAGFMILVYPVGIPLFYAYLLYKHRRVLK--GEDEVARETSSEAQSISDLWTPYKPGRFYYEVIECLRRMSLTGVVVFIYPNTAAQVAVTLVIAFSFVVVSERFAPYVSKWDSCISLTGHIIVFMSMYVALLSKVDVSEERPVSQNMLGRTLVAAHACLVVAVVVETLVICCSM 1457
+ GN FSC G L + +G+ A CDGC G E+ VP C EHT + G I L +D G+WR T +++VL CYN +AC G T+ C GYEG +D+ G I + + VV L A AV ++S + RG + R +PL S KIVVV+WQI+TQF +ANVTYPD+YQRFLDG+G+ NFD+ W+ SAGCIV VDFHDRLL+ST+GP+V L L TY A R N + LQ + +H+SMVLL++ VYSSVS+T+FQ FACE L DG YLR DYRI CDSSKH+A QV AG M++VY VGIP Y LL++ R VLK G D RE ++ S S+LW PYKP FYYEVIEC RR+ L GVVVFIYPNTA Q+A+TL++AF+FVVVSE APY S+WD+ +S GH +VF+SMYVALL KVDVS ER SQ + LVAAHAC+++ +V+ET+V+ C++
Sbjct: 1544 YRGNVFSCALGMFLDFNASGDPNEAACDGCQTPCDDDGCFEEPPLVPI-CALAMEHTGSAGGTNNITLLRVDDGFWRATPYAIDVLPCYNANACLAGVTNSSGSCLDGYEGPYCSICSDGYTAGLSFKCSECSDSAGGIILASFLAVVALLVAVAVVSYVVSDKVGEGSRGTVERLGRYIPLQSAKIVVVSWQILTQFTAVANVTYPDVYQRFLDGLGVFNFDLSWVLSAGCIVVVDFHDRLLISTIGPIVALLFLCWTYAAATRINRGATETLQVIWNRHVSMVLLLTVFVYSSVSSTLFQTFACESLADGETYLRADYRITCDSSKHKALQVYAGVMVVVYTVGIPALYGVLLFRDRDVLKRSGAD---REETARVISTSELWKPYKPSVFYYEVIECGRRVLLAGVVVFIYPNTAPQIAITLLMAFAFVVVSEGLAPYASRWDTWLSRMGHAVVFVSMYVALLLKVDVSNERVESQRVFEVVLVAAHACMILVIVIETVVLTCAL 2047
BLAST of mRNA_Ecto-sp6_S_contig9.17998.1 vs. uniprot
Match: D7G2X5_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X5_ECTSI) HSP 1 Score: 457 bits (1176), Expect = 2.770e-142 Identity = 243/503 (48.31%), Postives = 330/503 (65.61%), Query Frame = 3
Query: 6 FSGNTFSCENGKVLTYE--NGNRYAAVCDGCPVDSYWLGLVEDEEKVPSKCVEQPEHTRNPDGDATIETLLLDRGYWRTTNDSVNVLACYNEDACKGGRTDDPAFCKLGYEG----------ADNRGIIA----------ILAIG-GVVVLGAAAAVCMNLLSGDMDGTRRGVIHRFTERLPLPSFKIVVVAWQIVTQFATLANVTYPDMYQRFLDGVGILNFDVLWIPSAGCIVDVDFHDRLLVSTMGPLVVLALLARTYIVAKRRNCVSRAALQKVGQKHMSMVLLISFLVYSSVSTTVFQAFACEGLDDGVAYLRVDYRIECDSSKHRAFQVLAGFMILVYPVGIPLFYAYLLYKHRRVLKGEDEVARETSSEAQSISDLWTPYKPGRFYYEVIECLRRMSLTGVVVFIYPNTAAQVAVTLVIAFSFVVVSERFAPYVSKWDSCISLTGHIIVFMSMYVALLSKVDVSEERPVSQNMLGRTLVAAHACLVVAVVVETLVI 1445
F+GN F+C L Y+ + + AVCDGC V G DE C + +H + G T+ETL +D GYWR T+ S +L CYN DAC GG T +C YEG A N G + A+G V+ L A V M ++SG+ R V+ R +PL S KIV+V+WQI+TQFA+ ANV YP +YQ+FLDG+ + FD+ W+ SAGC++D+ FH RLL +T+GP+ + LLA TY A R N + L+ + KH+ + LL++FLVYSSVS+T+F+ FAC+ L+DG YLR DYRIECDSSKH+ FQV AGFMIL+YP+GIP+ Y+ LL+K R VLK +D+ R+ S+ +S S+LW PYKP FYYEVIEC RR+ LTG+VVFIYPNTAAQ+A+TL++AF F ++SE +PY S+W++ ++ GH++V +SMYVALL KVDVS+ER SQ++ LV HAC++++VVVET V+
Sbjct: 904 FTGNGFTCGPDLFLEYDATDNGTFEAVCDGCRVACD--GCSFDEPPAVPTCSDVMDHGTSTGGKVTLETLSIDPGYWRATSSSKEILPCYNADACLGGVTGTAGYCLESYEGPYCSICSDGYASNLGYSCSKCFSRSGGIVFAVGMAVLALFVAVVVIMYIMSGEAGERRMYVLERLGWYVPLQSVKIVIVSWQILTQFASAANVVYPGVYQQFLDGLKVFGFDLGWLMSAGCVLDMGFHGRLLAATIGPIFAVLLLAGTYAAATRINREANEKLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELEDGKNYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPMLYSILLFKDREVLK-KDKADRDDSARVKSTSELWQPYKPSVFYYEVIECGRRILLTGIVVFIYPNTAAQLAITLMMAFFFALLSEAISPYSSRWETWVNRMGHVVVAVSMYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETFVV 1403
BLAST of mRNA_Ecto-sp6_S_contig9.17998.1 vs. uniprot
Match: A0A6H5K7Z1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z1_9PHAE) HSP 1 Score: 451 bits (1160), Expect = 1.460e-139 Identity = 240/503 (47.71%), Postives = 330/503 (65.61%), Query Frame = 3
Query: 6 FSGNTFSCENGKVLTYENGN--RYAAVCDGCPVDSYWLGLVEDEEKVPSKCVEQPEHTRNPDGDATIETLLLDRGYWRTTNDSVNVLACYNEDACKGGRTDDPAFCKLGYEG----------ADNRGIIA----------ILAIG-GVVVLGAAAAVCMNLLSGDMDGTRRGVIHRFTERLPLPSFKIVVVAWQIVTQFATLANVTYPDMYQRFLDGVGILNFDVLWIPSAGCIVDVDFHDRLLVSTMGPLVVLALLARTYIVAKRRNCVSRAALQKVGQKHMSMVLLISFLVYSSVSTTVFQAFACEGLDDGVAYLRVDYRIECDSSKHRAFQVLAGFMILVYPVGIPLFYAYLLYKHRRVLKGEDEVARETSSEAQSISDLWTPYKPGRFYYEVIECLRRMSLTGVVVFIYPNTAAQVAVTLVIAFSFVVVSERFAPYVSKWDSCISLTGHIIVFMSMYVALLSKVDVSEERPVSQNMLGRTLVAAHACLVVAVVVETLVI 1445
F+GN F+C L ++ + AVCDGC V G DE+ C + +H+ +P G+ T+ETLL+D GYWR T+ S +L CYN DAC GG T +C YEG A N G A+G VV + A V ++SG+ R V R +PL S KIV+V+WQIVTQFA+ ANV YP +YQ+F+DG+ + FD+ W+ S GC++D+DFH RLL +T+GP+ + LLA TY A R N + L+ + KH+ + LL++FLVYSSVS+T+F+ FAC+ L+DG YLR DYRIECDSSKH+ FQV AGFMIL+YP+GIP+ Y+ LL++ R VLK +D+ R S+ +S S+LW PYKP FYYEVIEC RR+ LTG++VFIYPNTAAQ+A+TL++AF F ++SE +PY S+W++ ++ GH++V +S+YVALL KVDVS+ER SQ++ LV HAC++++VVVET V+
Sbjct: 964 FTGNGFTCGPDLFLEFDTSGDGTFEAVCDGCRVACD--GCSFDEQPAVPTCSDVMDHSTSPGGNVTLETLLIDPGYWRATSSSKKILPCYNADACLGGVTGTAGYCLESYEGPYCSICSNGYASNLGYSCSKCFSRSGGIAFAVGLAVVAVFVAVVVIRYIMSGEAGERRIYVFERLGWYVPLQSVKIVIVSWQIVTQFASAANVVYPGVYQQFIDGLKVFGFDLGWLLSVGCVLDMDFHGRLLAATIGPIFAVLLLAGTYAAATRINREANEKLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELEDG-NYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPVLYSILLFRDREVLK-KDKADRNDSARVKSTSELWQPYKPSVFYYEVIECGRRVLLTGIIVFIYPNTAAQLAITLMMAFFFALLSEAVSPYSSRWETWVNRMGHVVVAVSVYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETFVV 1462
BLAST of mRNA_Ecto-sp6_S_contig9.17998.1 vs. uniprot
Match: D7FRV1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRV1_ECTSI) HSP 1 Score: 436 bits (1122), Expect = 2.120e-137 Identity = 241/523 (46.08%), Postives = 327/523 (62.52%), Query Frame = 3
Query: 6 FSGNTFSCENGKVLTY--ENGNRYAAVCDGCPV--DSYWLGLVEDEEKVPSKCVEQPEHTRNPDGDATIETLLLDRGYWRTTNDSVNVLACYNEDACKGGRTDDPAFCKLGYEG------ADNRG---------------------IIAILAIGGVVVLGAAAAVCMNLLSGDMDGTRRG-VIHRFTERLPLPSFKIVVVAWQIVTQFATLANVTYPDMYQRFLDGVGILNFDVLWIPSAGCIVDVDFHDRLLVSTMGPLVVLALLARTYIVAKRRNCVSRAALQKVGQKHMSMVLLISFLVYSSVSTTVFQAFACEGLDDGVAYLRVDYRIECDSSKHRAFQVLAGFMILVYPVGIPLFYAYLLYKHRRVLKGEDEVARETSSEAQSISDLWTPYKPGRFYYEVIECLRRMSLTGVVVFIYPNTAAQVAVTLVIAFSFVVVSERFAPYVSKWDSCISLTGHIIVFMSMYVALLSKVDVSEERPVSQNMLGRTLVAAHACLVVAVVVETLVICCSMGRNEDRS 1478
F N C G + Y G RY AVCDGCP D +G+ E VP+ C E E+TR+ + +IE + +D GYWR T + VLACYN DAC GG T + +C+ GY G +N G ++ LA+GG AA+ L+S + +G +I +++ S KIVVV WQI+TQF+ +ANVTYP +YQRFLD + +LNFD+ W+ SAGC+VD DFHD LL +T+GP++V+ +L TY A RN S A+ +V +KH+S VLL++FLVYSSVS+TVF+ F C+ L D +YLR DY I+C S+KHRA Q+ A FM+L+YPVGIPLFY LLY R LK D R+ +A++IS LW PY P R+Y EV+EC RRM LTGVVVFIYPN+AAQ+A++L++ F+F+V+SE AP+ S WD +S GHI++F++M+VALL KVDVS+ER SQ + LV + L A V E + + C++ E+ S
Sbjct: 521 FRRNYIECPPGSFVDYYESEGGRYEAVCDGCPAADDGITMGV---ENLVPT-CTETLENTRSDGANTSIEDIRIDPGYWRATTTTTTVLACYNADACLGGITGEAGYCREGYYGPYCAICTENYGRTMAFECTKCSSGEGVAVGVIFVSALAVGG-------AALVAYLVSNEREGXXXXXLIVLVKDKVSFRSLKIVVVVWQILTQFSDVANVTYPHIYQRFLDVIDVLNFDIGWVISAGCVVDFDFHDHLLTATIGPIIVVGVLGATYAAASYRNRGSDEAIARVFRKHVSAVLLVTFLVYSSVSSTVFRMFVCDPLADSNSYLRADYSIQCSSTKHRALQIFAVFMVLLYPVGIPLFYGILLYNTREALK--DGSCRQAHPQAKTISALWEPYTPKRYYNEVVECGRRMLLTGVVVFIYPNSAAQIAISLLMTFAFLVISEVLAPFASAWDCWVSRCGHILIFVTMFVALLLKVDVSDEREGSQRLFAGILVVTNLVLFGAAVAEMVWMWCAVKMEENGS 1030 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.17998.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig9.17998.1 >prot_Ecto-sp6_S_contig9.17998.1 ID=prot_Ecto-sp6_S_contig9.17998.1|Name=mRNA_Ecto-sp6_S_contig9.17998.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=381bp MNLLSGDMDGTRRGVIHRFTERLPLPSFKIVVVAWQIVTQFATLANVTYPback to top mRNA from alignment at Ecto-sp6_S_contig9:143682..145945+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig9.17998.1 ID=mRNA_Ecto-sp6_S_contig9.17998.1|Name=mRNA_Ecto-sp6_S_contig9.17998.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=2264bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:143682..145945+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig9:143682..145945+ >mRNA_Ecto-sp6_S_contig9.17998.1 ID=mRNA_Ecto-sp6_S_contig9.17998.1|Name=mRNA_Ecto-sp6_S_contig9.17998.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1143bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:143682..145945+ (Ectocarpus species6 EcLAC_371)back to top |