mRNA_Ecto-sp6_S_contig9.17992.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig9.17992.1 vs. uniprot
Match: A0A6H5L717_9PHAE (SMI1_KNR4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L717_9PHAE) HSP 1 Score: 374 bits (961), Expect = 3.160e-129 Identity = 181/189 (95.77%), Postives = 185/189 (97.88%), Query Frame = 1
Query: 1 MTHVAEEGNPRKGGMTYAEINQSVLDVESWFKKHARGCLDNAEGAQDTDIQAMEKAMDTTIPEELRSIMTIQDGQLWFSEKQALTCKAMVAAAFKMEGRVPGWRAGLIPFAKDVDDSFLVTDTQARGCPVVEWDSADGEGGTVAKTFSLFLEGFRNELLSGRCEYVEGLGVVEKITKSNVSSPPRSNRK 567
MTHVAEEGNPRKGGMTY EINQSVLDVESWFKKHARGCLDNAEGAQD DIQA+EKA DTTIPEELRSIMTIQDGQLWFSEKQALTCKAMVAAAFKMEGRVPGWRAGLIPFAKDVDD+FLVTDTQARGCPVVEWD+ADGEGGTVA TFSLFLEGFRNELL+GRCEYVEGLGVVEKITKSNVSSPPRSNRK
Sbjct: 1 MTHVAEEGNPRKGGMTYDEINQSVLDVESWFKKHARGCLDNAEGAQDADIQALEKATDTTIPEELRSIMTIQDGQLWFSEKQALTCKAMVAAAFKMEGRVPGWRAGLIPFAKDVDDNFLVTDTQARGCPVVEWDAADGEGGTVATTFSLFLEGFRNELLAGRCEYVEGLGVVEKITKSNVSSPPRSNRK 189
BLAST of mRNA_Ecto-sp6_S_contig9.17992.1 vs. uniprot
Match: D7G8J0_ECTSI (Ubiquitin family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8J0_ECTSI) HSP 1 Score: 265 bits (676), Expect = 9.770e-87 Identity = 129/133 (96.99%), Postives = 131/133 (98.50%), Query Frame = 1
Query: 169 MDTTIPEELRSIMTIQDGQLWFSEKQALTCKAMVAAAFKMEGRVPGWRAGLIPFAKDVDDSFLVTDTQARGCPVVEWDSADGEGGTVAKTFSLFLEGFRNELLSGRCEYVEGLGVVEKITKSNVSSPPRSNRK 567
MDTTIPEELRSIMTIQDGQLWFSEKQALTCKAMVAAAFKMEGRV GWRAGLIPFAKDVDDSFLVTDTQARGCPVVEWD+ADGEGGTVAKTFSLFLEGFRNELLSG+CEYVEGLGVVEKITKSNVSSPPR NRK
Sbjct: 1 MDTTIPEELRSIMTIQDGQLWFSEKQALTCKAMVAAAFKMEGRVSGWRAGLIPFAKDVDDSFLVTDTQARGCPVVEWDAADGEGGTVAKTFSLFLEGFRNELLSGQCEYVEGLGVVEKITKSNVSSPPRGNRK 133
BLAST of mRNA_Ecto-sp6_S_contig9.17992.1 vs. uniprot
Match: A0A7S2V2L4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2L4_9STRA) HSP 1 Score: 140 bits (353), Expect = 1.920e-37 Identity = 73/170 (42.94%), Postives = 106/170 (62.35%), Query Frame = 1
Query: 10 VAEEGNPRKGGMTYAEINQSVLDVESWFKKHARGCLDNAEGAQDTDIQAMEKAMDTTIPEELRSIMTIQDGQLWFSEKQALTCKAMVAAAFKMEGRVPGWRAGLIPFAKDVDDSFLVTDTQARGCPVVEWDSADGEGGTVAKTFSLFLEGFRNELLSGRCEYVEGLGVVE 519
VAEEGN RKG ++ AEI Q VLD+ +WF+ + CL+ AE + ++IQ MEK +D +PE L + + +WF EK + +A++ A + GL+P AKDVDD+FLV DT + + EWD+ G+G VA +F+ FLE FRN LLSG+ E+++ G+VE
Sbjct: 7 VAEEGNRRKGSISTAEIEQCVLDIVTWFRGNTP-CLEQAEPVESSEIQQMEKTLDAELPEGLALLFQQTNQGIWFYEKSLMNVQAIMKNAQDIGD-------GLLPIAKDVDDNFLVVDTNSPRAALYEWDADSGKGSCVATSFNAFLELFRNNLLSGKYEFIDDTGIVE 168
BLAST of mRNA_Ecto-sp6_S_contig9.17992.1 vs. uniprot
Match: A0A5D6XM01_9STRA (SMI1_KNR4 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XM01_9STRA) HSP 1 Score: 131 bits (329), Expect = 6.870e-34 Identity = 70/175 (40.00%), Postives = 108/175 (61.71%), Query Frame = 1
Query: 7 HVAEEGNPRKGGMTYAEINQSVLDVESWFKKHARGCLDNAEGAQDTDIQAMEKAMDTTIPEELRSIMTIQDGQLWFSEKQALTCKAMVAAAFKMEGRVPGWRAGLIPFAKDVDDSFLVTDTQARGCPVVEWDSADGEGGTVAKTFSLFLEGFRNELLSGRCEYVEGLGVVEKITK 531
HV +GNPR+GGM E +Q + DV SWF++ A+ A + D+ +E+A+ T +PE LRS++T Q G +WF E ++L + + AA + G V GW+ +PFA ++D + LVTD +R V E+ DG GG +A T +LE +RN LLSG+ ++V+ +G+VE+ K
Sbjct: 5 HVVADGNPRQGGMDEDERDQCIHDVVSWFQRKAKL---RASAVSNADLDDLEQALGTELPEALRSLLTKQSGGIWFDEYKSLAAEDVAGAAETLSG-VKGWKKSFVPFAVNLDGAALVTDAGSRSA-VFEFGD-DGSGGQLAPTLLQYLEEYRNRLLSGQFDFVDDVGLVERSRK 173
BLAST of mRNA_Ecto-sp6_S_contig9.17992.1 vs. uniprot
Match: A0A7S3HIK1_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HIK1_9STRA) HSP 1 Score: 127 bits (320), Expect = 1.660e-32 Identity = 68/172 (39.53%), Postives = 109/172 (63.37%), Query Frame = 1
Query: 10 VAEEGNPRKGGMTYAEINQSVLDVESWFKKHARGCLDNAEGAQDTDIQAMEKAMDTTIPEELRSIMTIQDGQLWFSEKQALTCKAMVAAAFKMEGRVPGWRAGLIPFAKDVDDSFLVTDTQARGCPVVEWDSADGEGGTVAKTFSLFLEGFRNELLSGRCEYVEGLGVVEKI 525
VAEEGN R G M+ AE+ Q LD++SWF + + EGA D Q +EK +DT +P L+++++ +G ++F +K+ ++ + ++EG W++GL+PFA + D+S LV DT+ V EWDS+DG G VA + +LE +RN++LS R E++E +GV+EK+
Sbjct: 5 VAEEGNRRAGDMSTAEVVQCTLDIKSWFARTSCKKF-MVEGATSVDFQRLEKTIDTELPSALKAVLSEINGGIYFMDKKQMSTNQIAECFSRIEGSRQ-WKSGLVPFAGE-DESLLVIDTKHG--EVYEWDSSDGLGDMVAPSLEKYLEDYRNDILSRRVEFLEDVGVIEKM 171
BLAST of mRNA_Ecto-sp6_S_contig9.17992.1 vs. uniprot
Match: A0A024T8G8_9STRA (SMI1_KNR4 domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024T8G8_9STRA) HSP 1 Score: 127 bits (319), Expect = 2.340e-32 Identity = 68/175 (38.86%), Postives = 108/175 (61.71%), Query Frame = 1
Query: 10 VAEEGNPRKGGMTYAEINQSVLDVESWFKKHARGCLDNAEGAQDTDIQAMEKAMDTTIPEELRSIMTIQDGQLWFSEKQALTCKAMVAAAFKMEGRVPGWRAGLIPFAKDVDDSFLVTDTQARGCPVVEWDSADGEGGTVAKTFSLFLEGFRNELLSGRCEYVEGLGVVEKITKS 534
V EEGN RKGGM+ E +Q +LD+ SWF++ A Q +++AMEKA++TTIP+ L ++ Q+G +WF+E ++L+C ++A A + GW G +P A D D + LV DT+ V+ S+DG G +A + + + E +RNELLSG ++V+ +G+VE+ K+
Sbjct: 6 VVEEGNRRKGGMSSEETDQCILDILSWFQRKKAALPKGAMDPQ--EVEAMEKALETTIPKALVFLLEKQNGGIWFNEFKSLSCDEIIATAETSQAW-DGWTRGFVPLAADADGALLVIDTKDGNA--VQELSSDGIGRQLASSLTAYFETYRNELLSGNYDFVQDVGLVERSHKA 175
BLAST of mRNA_Ecto-sp6_S_contig9.17992.1 vs. uniprot
Match: K3WYP7_GLOUD (SMI1_KNR4 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WYP7_GLOUD) HSP 1 Score: 125 bits (315), Expect = 7.060e-32 Identity = 72/174 (41.38%), Postives = 106/174 (60.92%), Query Frame = 1
Query: 10 VAEEGNPRKGGMTYAEINQSVLDVESWFKKHARGCLDNAEGAQDTDIQAMEKAMDTTIPEELRSIMTIQDGQLWFSEKQALTCKAMVAAAFKMEGRVPGWRAGLIPFAKDVDDSFLVTDTQARGCPVVEWDSADGEGGTVAKTFSLFLEGFRNELLSGRCEYVEGLGVVEKITK 531
V +GNPR+GGM E +Q + DV +WF++ A+ L N+ +D+Q +E+A+ T +PE LRS++ Q G LWF E +A+ A A K GW++ IPFA DVD + L+TD +R V E+ DG+G +A T +LE +RN LLSG+ +YVE +G+VE+ K
Sbjct: 6 VLADGNPRQGGMDEDERDQCIHDVVNWFQRKAK--LKNSTETS-SDLQELEQALGTELPEALRSLLKKQSGGLWFDEYKAIVRTAETLAGIK------GWKSSYIPFAADVDGAALITDVGSRNA-VFEFGD-DGKGSQLAPTLLQYLEEYRNRLLSGQYDYVEDVGLVERSRK 168
BLAST of mRNA_Ecto-sp6_S_contig9.17992.1 vs. uniprot
Match: G4YZV6_PHYSP (SMI1_KNR4 domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=G4YZV6_PHYSP) HSP 1 Score: 123 bits (308), Expect = 9.080e-31 Identity = 72/177 (40.68%), Postives = 109/177 (61.58%), Query Frame = 1
Query: 10 VAEEGNPRKGGMTYAEINQSVLDVESWFKKHARGCLDNAEGA--QDTDIQAMEKAMDTTIPEELRSIMTIQDGQLWFSEKQALTCKAMVAAAFKMEGRVPGWRAGLIPFAKDVDDSFLVTDTQARGCPVVEWDSADGEGGT-VAKTFSLFLEGFRNELLSGRCEYVEGLGVVEKITK 531
V GNPRKG M E +Q + D+ SWF++ A + E A ++ DI+A+EK + IPEELRS++T Q G +WF + ++L+ ++ A + G + GW + IPFA +VD L+TDT AR V E++ DG+G +A T +LE +RN LLSG+ ++VE +G+VE+ K
Sbjct: 6 VVAGGNPRKGAMDVDERDQCIRDIVSWFQRKA-----DLEPAVEKNADIEALEKTLGMEIPEELRSLLTTQSGGIWFDDYKSLSADDIINKAESL-GSIKGWESLFIPFAANVDGGALITDTSARNA-VFEFNE-DGKGDRPLAPTLLEYLEKYRNRLLSGKFDFVEDVGLVERSRK 174
BLAST of mRNA_Ecto-sp6_S_contig9.17992.1 vs. uniprot
Match: D0NJD7_PHYIT (SMI1_KNR4 domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=D0NJD7_PHYIT) HSP 1 Score: 120 bits (301), Expect = 9.810e-30 Identity = 69/175 (39.43%), Postives = 110/175 (62.86%), Query Frame = 1
Query: 10 VAEEGNPRKGGMTYAEINQSVLDVESWFKKHARGCLDNAEGAQDTDIQAMEKAMDTTIPEELRSIMTIQDGQLWFSEKQALTCKAMVAAAFKMEGRVPGWRAGLIPFAKDVDDSFLVTDTQARGCPVVEWDSADGEGGT-VAKTFSLFLEGFRNELLSGRCEYVEGLGVVEKITK 531
V EGNPRKG M E +Q + D+ SWF++ A L++A ++ DI+A+EK + IPEELRS++ Q G +WF + ++L+ ++ A + + GW + L+PFA +VD LV+DT +R V E++ DG+G +A + +LE +RN LLSG+ ++VE +G+VE+ K
Sbjct: 6 VVAEGNPRKGAMDVDERDQCIHDIVSWFQRKAN--LESA-AEKNADIEALEKTLGKEIPEELRSLLMTQSGGIWFDDYKSLSADDIINKAETLAS-IKGWDSSLVPFAVNVDGGALVSDTGSRNA-VFEFNE-DGKGDRPLAPSLLEYLEKYRNRLLSGKFDFVEDVGLVERSRK 174
BLAST of mRNA_Ecto-sp6_S_contig9.17992.1 vs. uniprot
Match: A0A3R7JY01_9STRA (SMI1_KNR4 domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JY01_9STRA) HSP 1 Score: 120 bits (300), Expect = 1.380e-29 Identity = 72/175 (41.14%), Postives = 109/175 (62.29%), Query Frame = 1
Query: 10 VAEEGNPRKGGMTYAEINQSVLDVESWFKKHARGCLDNAEGAQDTDIQAMEKAMDTTIPEELRSIMTIQDGQLWFSEKQALTCKAMVAAAFKMEGRVPGWRAGLIPFAKDVDDSFLVTDTQARGCPVVEWDSADGEGG-TVAKTFSLFLEGFRNELLSGRCEYVEGLGVVEKITK 531
V +GNPRKG M E +Q + D+ SWF++ A NAE ++ DI+A+EK + IP LRS++T Q G +WF E ++L+ ++ A + V GW + L PFA +VD + LVTDT + G V E++ DG+G ++A T +LE +RN LLSG+ ++VE +G+VE+ K
Sbjct: 6 VVADGNPRKGAMNEDERDQCIHDIVSWFQRKAN-LESNAE--KNADIEALEKTLGMEIPGALRSLLTNQSGGIWFDEFKSLSADGIINTAETLAS-VKGWDSALTPFATNVDGAALVTDTSS-GDAVFEFNE-DGKGDRSLAPTLWEYLEQYRNRLLSGKFDFVEDVGLVERSRK 174 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.17992.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig9.17992.1 >prot_Ecto-sp6_S_contig9.17992.1 ID=prot_Ecto-sp6_S_contig9.17992.1|Name=mRNA_Ecto-sp6_S_contig9.17992.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=190bp MTHVAEEGNPRKGGMTYAEINQSVLDVESWFKKHARGCLDNAEGAQDTDIback to top mRNA from alignment at Ecto-sp6_S_contig9:72117..75366+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig9.17992.1 ID=mRNA_Ecto-sp6_S_contig9.17992.1|Name=mRNA_Ecto-sp6_S_contig9.17992.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=3250bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:72117..75366+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig9:72117..75366+ >mRNA_Ecto-sp6_S_contig9.17992.1 ID=mRNA_Ecto-sp6_S_contig9.17992.1|Name=mRNA_Ecto-sp6_S_contig9.17992.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=570bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:72117..75366+ (Ectocarpus species6 EcLAC_371)back to top |