mRNA_Ecto-sp6_S_contig9.17986.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig9.17986.1
Unique NamemRNA_Ecto-sp6_S_contig9.17986.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
BLAST of mRNA_Ecto-sp6_S_contig9.17986.1 vs. uniprot
Match: A0A6H5JE30_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JE30_9PHAE)

HSP 1 Score: 920 bits (2377), Expect = 0.000e+0
Identity = 475/500 (95.00%), Postives = 482/500 (96.40%), Query Frame = 1
Query:    1 MTLQVEEGSSAAAADALAARSAAASAVAKPFVSRKLGSFEKMLTQTRDGAGPAEDGVRTLTTPHVWAAVIDGDLPRSSLKRGIEAVLARHPMLRACIRTPDGPKEPLIDIRGEERDDGDPLYFCESECESLGALAECVLAPEEDEISGDEAFAREWRGRLERNLDNARLPVSAGPNWRVETIRLSGRGRPGPRRRRTALVCTMNHALEDQRSSNVMLQGILEAAAEKASGPARSADDAGGFDLPPSMEAAIVEGKRFRRNTLRYMWRQATMAIAKPMVVPDGLPSVDERSEGGDEGPFGVSSRKSACEFSSVPADDVSAMLQACSRERGLTLSGALSAACLMACSDVAHAEGSRGSNRYKFLLAVDLRRFGTGDYSGMDDWTGGTVACAGGAIDYAVKVPAGSGSRLVGRDGEEAARVAREEFWRLAERCKTATRDMVEKETLREAVAVFDWAMENIHIWASVDMQSRNAKTLGRAYTCGVSNMGRYPFDTQGRQSFSQG 1500
            M  +VEEGSSAAAADALAARSAAASAVAKPFVSRKLGSFEKMLTQTRDGAGPAEDGVRTLTTPHVWAAVIDGDLPRSSLKRGIEAVLARHPMLRACIRTPDGPKEPLIDIRGEERDDGDPLYFCESECESLGALAE VLAPEEDEISGDEAFAREWRGRLERNLDNARLPVS GPNWRVETIRLSGRGRPGPRR RTALVCTMNHALEDQRSSNVMLQGILEAAA KA GPARSA+DAGGFDLPPSMEAAIVEGKRFR NTLRYMWRQAT+AIAKPMV+PDGLPSVDERSEGGDEGPFGVSSRKSACEFSSVPADDVSAMLQAC RERGLTLSGALSAACLMACSDVAHAEGSRGSNRYKFLLAVDLRRFGTGDYS M DWTGGTVACAGG+IDYAV VPAGSGS LVGRDGEEAARVAREEFWRLA+RCKTAT+DMVEKETLREAVAVFDWAMENIHIWASVDMQSRNAKTLGRAYTCGVSNMGRYPFDTQ R  F  G
Sbjct:    1 MISEVEEGSSAAAADALAARSAAASAVAKPFVSRKLGSFEKMLTQTRDGAGPAEDGVRTLTTPHVWAAVIDGDLPRSSLKRGIEAVLARHPMLRACIRTPDGPKEPLIDIRGEERDDGDPLYFCESECESLGALAERVLAPEEDEISGDEAFAREWRGRLERNLDNARLPVSTGPNWRVETIRLSGRGRPGPRRSRTALVCTMNHALEDQRSSNVMLQGILEAAAGKAGGPARSANDAGGFDLPPSMEAAIVEGKRFRINTLRYMWRQATVAIAKPMVLPDGLPSVDERSEGGDEGPFGVSSRKSACEFSSVPADDVSAMLQAC-RERGLTLSGALSAACLMACSDVAHAEGSRGSNRYKFLLAVDLRRFGTGDYSDMGDWTGGTVACAGGSIDYAVTVPAGSGSMLVGRDGEEAARVAREEFWRLAKRCKTATQDMVEKETLREAVAVFDWAMENIHIWASVDMQSRNAKTLGRAYTCGVSNMGRYPFDTQVRSPFGTG 499          
BLAST of mRNA_Ecto-sp6_S_contig9.17986.1 vs. uniprot
Match: A0A6H5JIH8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIH8_9PHAE)

HSP 1 Score: 597 bits (1540), Expect = 3.630e-206
Identity = 308/328 (93.90%), Postives = 313/328 (95.43%), Query Frame = 1
Query:  349 DGDPLYFCESECESLGALAECVLAPEEDEISGDEAFAREWRGRLERNLDNARLPVSAGPNWRVETIRLSGRGRPGPRRRRTALVCTMNHALEDQRSSNVMLQGILEAAAEKASGPARSADDAGGFDLPPSMEAAIVEGKRFRRNTLRYMWRQATMAIAKPMVVPDGLPSVDERSEGGDEGPFGVSSRKSACEFSSVPADDVSAMLQACSRERGLTLSGALSAACLMACSDVAHAEGSRGSNRYKFLLAVDLRRFGTGDYSGMDDWTGGTVACAGGAIDYAVKVPAGSGSRLVGRDGEEAARVAREEFWRLAERCKTATRDMVEKETLR 1332
            DGDPLYFCESECESLGALAE VLAPEEDEISGDEAFAREWRGRLERNLDNARLPVS GPNWRVETIRLSGRGRPGPRR RTALVCTMNHALEDQRSSNVMLQGILEAAA KA GPARSA+D GGFDLPPSMEAAIVEGKRFR NTLRYMW QAT+AIAKPMV+PDGLPSVDERSEGGDEGPFGVSSRKSACEFSSVPADDVSAMLQAC RERGLTLSGALSAACLMACSDVAHAEGSRG N YKFLLAVDLRRFGTGDYS M DWTGGTVACAGGAIDYAV VPAGSGSRL GRDGEEAARVAREEFWRLA+RCKTAT+DMVEKETLR
Sbjct:   95 DGDPLYFCESECESLGALAERVLAPEEDEISGDEAFAREWRGRLERNLDNARLPVSTGPNWRVETIRLSGRGRPGPRRSRTALVCTMNHALEDQRSSNVMLQGILEAAAGKAGGPARSANDTGGFDLPPSMEAAIVEGKRFRINTLRYMWDQATVAIAKPMVLPDGLPSVDERSEGGDEGPFGVSSRKSACEFSSVPADDVSAMLQAC-RERGLTLSGALSAACLMACSDVAHAEGSRGLNLYKFLLAVDLRRFGTGDYSDMGDWTGGTVACAGGAIDYAVTVPAGSGSRLAGRDGEEAARVAREEFWRLAKRCKTATQDMVEKETLR 421          
BLAST of mRNA_Ecto-sp6_S_contig9.17986.1 vs. uniprot
Match: A0A835ZIW7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIW7_9STRA)

HSP 1 Score: 330 bits (846), Expect = 1.020e-99
Identity = 215/492 (43.70%), Postives = 275/492 (55.89%), Query Frame = 1
Query:   88 PFVSRKLGSFEKMLTQTRDGAGPAEDGVRTLTTPHVWAAVIDGDLPRSSLKRGIEAVLARHPMLRACIRTPDGPKEPLIDIRGEERDDGDPLYFCESECESLGALAECVLAPEED--------EISGDEAFAREWRGRLERNLDNARLPVSAGPNWRVETIRLSGRGRPGPRRRRTALVCTMNHALEDQRSSNVMLQGILEAAAEKASGPAR----------SADDAGGF-DLPPSME-AAIVEGKRFRRNTLRYMWRQATMAIAKPMVVPDGLPSVDERSEGGDEGPFGVSSRKSACEFSSVPADDVSAMLQACSRERGLTLSGALSAACLMACSDVAHAEGSRGSNRYKFLLAVDLRRFGTG----------DYSGMD----DWTGGTVACAGGAIDYAVKVPAGSGSRLVGRDGEEAARVAREEFWRLAERCKTATRDMVEKETLREAVAVFDWAMENIHIWASVDMQSRNAKTLGRAYTCGVSNMGRY 1461
            PF SR LGSFEKML + R G+         L+TPHVW AV+ GD+  ++L  GI A+LARHPMLRA I+    P+E +++       D DPL F ESEC+SL  LA  V+ PE+                F   W  R+E  L++A+    AGPNW VE +R + R         TALV TMNHA+EDQ+S+N +L  +L AAA     P R          SA  A  F +LPPS+E A + E  +F   T RY+ +QA   +  P +V D LP  + R+       F   +R++ CE  ++ AD++ A L AC R++GLTL+ ALSAA L+ACSDVAHA+GS   + YKFLLAVDLR FG G          +  G +    DWT G VACAGGA+D+   +PA SG  LV       A  A  +FWRLA R +          T REA AVFDW M  I I    + ++R   TLGRAYTCGVSNMGRY
Sbjct:   58 PFKSRVLGSFEKMLAKERMGSN-------ILSTPHVWVAVVQGDVSPTALHAGIVALLARHPMLRASIQGAGLPEEVVMETIRTSPVDADPLRFVESECDSLEELAYRVITPEQGAGTRGTGVRHEDGAPFQAAWHARMEHQLEHAQFDRRAGPNWAVEAVRCASRAH-------TALVFTMNHAIEDQKSANTLLHELLIAAAXXXXXPPRLAPAAALAALSAACAPPFTELPPSIEDATVAEPGKFGLGTARYLLKQAASGVFGPRLVHDHLPPPERRATPA----FAPEARRTICEVRALEADELQAALAAC-RQKGLTLTAALSAAALLACSDVAHADGSDAWHNYKFLLAVDLRPFGAGAPGHQGKPNANGGGAEARALDWTEGAVACAGGAMDWVAGLPANSGRALV-----SGAAGAERDFWRLARRARGEMAAFAASGTAREAAAVFDWGMRAIEIGDVCEREARRPATLGRAYTCGVSNMGRY 525          
BLAST of mRNA_Ecto-sp6_S_contig9.17986.1 vs. uniprot
Match: A0A7S2V5Q7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5Q7_9STRA)

HSP 1 Score: 190 bits (483), Expect = 3.220e-48
Identity = 165/488 (33.81%), Postives = 239/488 (48.98%), Query Frame = 1
Query:   91 FVSRKLGSFEKMLTQTRDGAGPAEDGVRTLTTPHVWAAVIDGDLPRSSLKRGIEAVLARHPMLRACIRTPDGPK-EPLIDIRGEERDDGDPLYFCESECESLGALAECVLAPEEDEISGDEAFAREWRGRLERNLDNARLPVSAGPNWRVETIRLSGRGRPGPRRRRTALVCTMNHALEDQRSSNVMLQGILEAAAEKASGPARSADDAG----GFDLPPSMEAAIVEGKRFRRNTLRYMWRQATMAIAKPMVVPDGLPSVDERSEGG-------------DEGPFGV------SSRKSACEFSSVPADDVSAMLQACSRERGLTLSGALSAACLMACSDVAH-------AEGSRGSNRYKFLLAVDLRRFGTGDYSGMDDWTGGTVACAGGAIDYAVKVPAGSGSRLVGRDGEEAARVAREEFWRLAERCKTATRDMVEKETLREAVAVFDWAMENIHIWASVDMQSRNAKTLGRAYTCGVSNMGRY 1461
            F  R LG+FEK L+ TR     +E+ V +  +  V +   D  +   SL   +EAV+ RH +LR+C+     P+ EP   +R     D DP  +  +   + G LA  VL   + + S +EAF   W+      LDNA      GP WR+  +  +G        +R AL+   NHA+ DQ S+N++L  +L + +   S  A  A+  G       LPPS+E  +  G   +  T RY   Q         ++PD +     + E               +E P  V       +R +  E +++ A  ++A+   C RE G+T+S AL+AA LMA SDVAH         GS  S  YKFLL+VDLRRFG  D SG D WT G VACAGGA+D+ V V   + S  +  D  +      + FW LA  C+    + +    +RE VA+FDW M+ + I   ++ ++ + K LGR +TCGVSNMG Y
Sbjct:   61 FQGRPLGNFEKYLSGTRR---ESENVVISHLSLAVVSDTTDSLVSEISLLETLEAVMNRHCLLRSCVSGEGKPELEPAPMVR---IGDLDPPTWVPAPLGAKG-LAPKVLQTIQVDGSDEEAFQAAWQKEFVWQLDNASYNKKTGPLWRLTWLPQAGA-------QRHALLFAFNHAISDQISANMILDEVLTSLSSSKSKTAALAEAFGPAPNNGQLPPSVEETVGAGG-LQLGTARYALIQTINGAKGVTLLPDRIKKRLSQKEAEIKELKKEQPELAEEELPAIVPEEYLSKNRNTFIELATLKASKLAALRDLCRRE-GVTVSAALAAASLMATSDVAHDTTXXXXTRGSPKSQLYKFLLSVDLRRFG--DSSGAD-WTKGAVACAGGAVDFVVPVTEKAASEFLHGDSTQM-----KGFWDLARTCRKEALEFIGTNFVRETVAMFDWGMKYVDIGEIMNDEADSKKALGRLFTCGVSNMGVY 524          
BLAST of mRNA_Ecto-sp6_S_contig9.17986.1 vs. uniprot
Match: W7TVP6_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TVP6_9STRA)

HSP 1 Score: 154 bits (390), Expect = 2.080e-35
Identity = 125/388 (32.22%), Postives = 185/388 (47.68%), Query Frame = 1
Query:  478 LERNLDNARLPVSAGPNWRVETIRLSGRGRPGPRRRRTALVCTMNHALEDQRSSNVMLQGILE-------AAAEKASGPARSADDAGGFDLPPSMEAAIVEGKR--FRRNTLRYMWRQATMAIAKPMVVPD-GLPSVDERSEGGDEGPFG-------VSSRKSACEFSSVPADDVSAMLQACSRERGLTLSGALSAACLMACSDVAHAEGSRGS----------------NRYKFLLAVDLRRFGT-----GDYSGMDD---WTGGTVACAGGAIDYAVKVPAGSGSRLVGR-----------DG-EEAARVAREEFWRLAERCKTATRDMVEKETLREAVAVFDWAMENIHIWASVDMQSRNAKTLGRAYTCGVSNMGRYPFDTQGR 1482
             +R LD   +  S GP WR++ +R  G  R G    R AL+   NHA+ DQ S N ++  +L+       +  ++   P R A        PPS+E A++   R      TL Y  R+A   I    + P    PS   R     EGP          ++R++ CEF ++ +D +S ML+A  + RG+T++ AL AA L A SD AH +   G                 + Y+ LL++++R FG      G   G ++   W    VA A GA+D+ V++P   GS L  R           DG E+     + +FW L +RC+    D +E   + E+V +FDW M+ I +   V+ ++ N +T GRAYTCGVSNMG   FD  GR
Sbjct:  249 FQRALDETDMDTSRGPLWRLKVLRPMGARREG----RIALLFLFNHAISDQTSCNTLIHELLDTVEHIHSSCLDRQPTPGRPAPFVIPQAFPPSIEEAVLGPTRGTLSLTTLLYAAREALFGILPTTLFPRFPPPSYTPRPTADPEGPXXXXPPFLPAATRRTICEFRTLDSDSLS-MLRAACKSRGVTVTAALCAAMLYATSDFAHGQDGGGGRPERGHKQQKGREGAYHNYRLLLSLNMRAFGRSRKDEGREGGGEEEKMWAEHAVASAAGAMDFMVRLPEQRGSTLSLRPKRTGGSEEANDGTEDGVWEGKRDFWALTKRCRRELVDFIEAGFVAESVQLFDWGMQTIELNDVVEKEAENPQTFGRAYTCGVSNMG--IFDGTGR 629          
BLAST of mRNA_Ecto-sp6_S_contig9.17986.1 vs. uniprot
Match: A0A0G4EFM9_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EFM9_VITBC)

HSP 1 Score: 117 bits (292), Expect = 1.210e-23
Identity = 130/482 (26.97%), Postives = 207/482 (42.95%), Query Frame = 1
Query:   88 PFVSRKLGSFEKMLTQTRDGAGPAEDGVRTLTTPHVWAAVIDG--DLPRSSLKRGIEAVLARHPMLRACIRTPDGPKEPLIDIRGEERDDGDPLYFCESECESLGALAECVLAPEEDEISGDEAFAREWRGRLERNLDNARLPVSAGPNWRVETIRLSGRGRPGPRRRRTALVCTMNHALEDQRSSNVMLQGILE-----AAAEKASGPARSADDAGGFDLPPSMEAAIVEG------------KRFRRNTLRYMWRQATMAIAKPMVVPDGLPSVDERSEGGDEGPFGVSSRKSACEFSSVPADDVSAMLQACSRERGLTLSGALSAACLMACSDVAHAEGSRGSNRYKFLLAVDLRRFGTGDYSGMDDWTGGTVACAGGAIDYAVKVPAGSGSRLVGRDGEEAARVAREEFWRLAERCKTATRDMVEKETLREAVAVFDWAMENIHIWASVDMQSRNAKTLGRAYTCGVSNMGRYPFDTQ 1476
            P  +R LGS+E++LT+T+     A      L+  H   A + G   L R  ++R +E V+ RHP+LR  I        P+ D         +  +F   +  S   L +  +   + E         EWR  +E  +D    P  A P W +  +     GR       +ALV   NHA+ DQ S++++L+ +L+     ++   A  PA  +        PPS+EA +               + F   T++++ R     +   M+V D       R EG        S R +     ++    +   L+  SR  G T++ AL AA LMAC DV+       +   +FLL+ DLRRF              T++  GG++++ ++VP      L G         + E FWR A+ C+   R +++    RE   +FD  M    I   V+  + + +T GRAYTCG+SN G +P  TQ
Sbjct:   74 PTYTRPLGSWERLLTKTQRNERDAP-----LSIAHFSVAELTGTSSLTRDDVRRALEGVVLRHPLLRVQIGD-----LPVGDECCPRPQSVEWPWFYPLDA-SADELVDRAVVWVDVEARNSAELRNEWRTLVEGTIDGVTFPRDA-PLWLLHVVHSPSAGR-------SALVWLFNHAISDQISAHIVLEDLLDDIQPHSSKHHADNPAPLS-----VSFPPSVEALLFGNTSIEEPFVDYVRRVFSWQTVKHLVRATATIVCPVMLVLDR-----RRGEG-----LTPSQRHTQLCLRTL-GRPLMEKLKHRSRREGTTVTAALIAAALMACQDVS----GMSNPLVRFLLSTDLRRFAVNSPLPRPC----TLSSLGGSVEFNLRVP----PALAG---------SHEAFWRFAKGCREEFRSVIDVSG-REGPLLFDVGMRVAEIEDVVEKAAASEQTHGRAYTCGLSNAGVWPGRTQ 498          
BLAST of mRNA_Ecto-sp6_S_contig9.17986.1 vs. uniprot
Match: A0A7S0LLM9_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LLM9_9EUKA)

HSP 1 Score: 108 bits (270), Expect = 1.710e-21
Identity = 97/319 (30.41%), Postives = 159/319 (49.84%), Query Frame = 1
Query:  589 TALVCTMNHALEDQRSSNVMLQGILEA-AAEKASGPARSADDAGGFDLPPSMEAAIV-------EGKRFRRNTLRYMWRQATMAIAKPMVVPDGLPS----VDERSEGGDEGPFGVSSRKSACEFSSVPADDVSAMLQACSRERGLTLSGALSAACLMACSDVAHA-----EGSRGSNRYKFLLAVDLRRFGTGDYS----GMDDWTGGTVACAGGAIDYAVKVPAGSGSRLVGRDGEEA-ARVAREEFWRLAERCKTATRDMVEKETLREAVAVFDWAMENIHIWASVDMQSRNAKTLGRAYTCGVSNMGRYPFDTQG 1479
            +AL+   NHA+ DQ S   +L  ++ A +AE++S             +PPS+E A++       E    R  +L    R AT++ A   +   G P     V   S+ G+E    +  R++A  F+ V +   +++ Q C R  G+T+SGA++AA L+A SD   A     +G+    RYK L A+++R +G  D      G  DW+ G+V    G++D  V +  GSG  L+ R  +   A  A    W  A+ C   TR  ++    RE++ +F    E +++   V++ +++  TLGRAY+CG SN+G Y   + G
Sbjct:   30 SALLYAANHAVSDQLSLQRVLGELIGAISAERSS---ELLPPPVSLPVPPSVEEALIGPYSVAAEPIDARLRSLLRRVRLATLSYAGFQLSAGGAPVLPNWVPPPSKIGEE--MHLRERRTASIFAMVSSKSTASLRQRC-RANGVTISGAVNAAALLAASDALGAVEKDEDGALKRLRYKLLQAINMRPYGGSDGGISGDGSRDWSAGSVLAGTGSLDLLVDLTPGSGRDLLDRVAQAPQASNALSTLWSTAKECNEQTRRWIDNGWPRESLVLFGAGWEFMNMNRVVELSAQDCSTLGRAYSCGTSNVGVYAHQSTG 342          
BLAST of mRNA_Ecto-sp6_S_contig9.17986.1 vs. uniprot
Match: A0A7S2B0Z3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B0Z3_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 1.000e-14
Identity = 61/207 (29.47%), Postives = 107/207 (51.69%), Query Frame = 1
Query:  892 FGVSSRKSACEFSSVPADDVSAMLQACSRERGLTLSGALSAACLMAC-------SDVAHAEGSRGSNRYKFLLAVDLRRFGTGDYSGMDDWTGGTVACAGGAIDYAVKVPAGSGSRLVGRDGEEAARVAREEFWRLAERCKTATRDMVEKETLREAVAVFDWAMENIHIWASVDMQSRNAKTLGRAYTCGVSNMGRYPFDTQGRQSF 1491
            F  + R+S+  F++V    + A+ +A ++ +G T+  AL+AA   +C        +   ++    S  +K L ++D+RRF + D++  +     T++C  G++D  V     +   L  R+ EE+   AREEFW  A  CK      +       AV VFD A +++ +   V++ + +  +LGRAY+CGVSN G YP+ +    S+
Sbjct:  154 FKAAQRRSSMRFATVDKKTLGALRKA-AKIKGTTVGAALAAAAAFSCMRTFPGDDNTGESDKETSSMTFKVLQSLDMRRFASSDWTDTE-----TLSCHAGSMDLMVTPTFATAKALSSRNSEES---AREEFWEAAASCKDQLGQFIGSGFGPAAVRVFDLASQSMEMSRLVELNADSPLSLGRAYSCGVSNAGVYPWPSSHSSSY 351          
BLAST of mRNA_Ecto-sp6_S_contig9.17986.1 vs. uniprot
Match: B8C3R0_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C3R0_THAPS)

HSP 1 Score: 78.6 bits (192), Expect = 2.720e-11
Identity = 122/512 (23.83%), Postives = 220/512 (42.97%), Query Frame = 1
Query:  190 HVWAAVIDGDLPRSSLKRGIEAVLARHPMLRACIRTPDGPKEPLIDIR-------GEERDDGDPLYFC-----------ESECESLGALAECVLAPEE-------DEISGD--EAFAREWRGRLERNLDNARLPVSA--GPN--------WRVETIRLSGRGRPGPRRRRTALVCTMNHALEDQRSSNVMLQGI------LEAAAEKASGPARSADD-----AGGFDLPPSMEAAIVEGKRFRRNTL-RYMWRQATMAIAKPMVVPDGLPSVDE-------------------RSEGGD-------------EGPFGVSSRKSACEFSSVPADDVSAMLQACSRERGLTLSGALSAACLMACSDVAHAEGSRGSNR-YKFLLAVDLRRFGTGDYSGMDDWTGGTVACAGGAIDYAVKVPAGSGSRLVGRDGEEAARVAR------EEFWRLAERCKTATRDMVEKETLREAVAVFDWAMENIHIWASVDMQSRNAKTLGRAYTCGVSNMGRY 1461
            H+ A ++       +L++ +++ +  HP+LR+ +     PK+ L  IR       G +  + DPL F            E+E  S+   ++ V  P+          ++G   E   R W+ R + +LD++ +   A  G +        W++E  RLS       +  + ALV T+NHA+ DQ S ++++  I      LEA  EK+     +  D     A    LP S+  +++       + + +   RQ+  +I +    P  L  + E                   ++EGG               G   +++R+S   + ++P+D  +A+++   + R + +S  L+AA    CSD  +A+ +    R YK L ++D RRF     +G  D  G T++C  G +D  +    G     +GRD  E  + +       E FW LA++    T   ++     E+V +F   M    I   V+  +R+  T GRA++ G++N+G Y
Sbjct:  107 HIAAFILSSTPSTWALQQALDSAVRTHPLLRSRVVGNGQPKKWLDPIRRMVRWNGGWDEKEEDPLEFISNAISESNVVMETEPNSIDDSSDKVSCPKYWGGALHIVNVNGTSREELDRSWQHRFQEDLDSSTVVSVAIDGSHALANTRDLWKLEMHRLSSNV-VDDKDTQCALVLTLNHAISDQGSVDLVMDEIISDIEALEAMDEKSKKSYTTKRDPLEIPAVIQPLPTSLCDSLLGDSPQNEDCVDKSTDRQSVASILRAPFAPS-LKKLREYACHRIQASILHRPALLPRQNEGGIIESLSILLFGRPLSGFEDITTRRSNVHYRTIPSDVTAALVKQSKKHR-VPISMTLAAAVATTCSDYFNADENHREQRVYKVLQSLDTRRF-----AGASD-VGNTLSCQAGGMDLYL----GPMQDCLGRDIREYFKCSTGIKNPVEAFWTLAKQSFDQTSSFLKSGQAIESVRLFALGMSICDIGRLVETYTRSRATQGRAWSAGITNVGEY 605          
BLAST of mRNA_Ecto-sp6_S_contig9.17986.1 vs. uniprot
Match: A0A7S2WT35_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WT35_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 1.270e-5
Identity = 50/197 (25.38%), Postives = 90/197 (45.69%), Query Frame = 1
Query:  616 ALEDQRSSNVMLQGILEAAAEKASGPARSADDAGGFDLPPSMEAAIVEGKRFRR--NTLRYMWRQATMAIAKPMVVPDGLPSVDERSEGGDEGPFGVSSRKSACEFSSVPADDVSAMLQACSRERGLTLSGALSAACLMACSDVAHAEGSRGSNRYKFLLAVDLRRFGTGDYSGMDDWTGGTVACAGGAIDYAVKVP 1200
            A++DQ S + +L  +L+   E   G   +  +     LPPS+E +++  + +        YM  +A   +  P+V P+GL   D +   G+        R +A     +P + +  +   C +E G+ LS  L+AA ++A S++     +     YK L A+++R FGT        W    V+C  G++D  +  P
Sbjct:    1 AIDDQISFHTLLNDMLDRLGELKEGKGLAPPEP--LPLPPSLEESVLGSEPYSSPLEAPGYMVAKALEGLKTPLVTPEGL---DTKKLAGEP-------RSTALALRDIPNEVIDRIRVKC-KELGVGLSAVLTAASVVASSELLPQNSASQPRVYKCLQALNMRNFGT--------WKEDGVSCQAGSMDLLLSCP 176          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.17986.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A6H5JE30_9PHAE0.000e+095.00Uncharacterized protein n=3 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JIH8_9PHAE3.630e-20693.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZIW7_9STRA1.020e-9943.70Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2V5Q7_9STRA3.220e-4833.81Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
W7TVP6_9STRA2.080e-3532.22Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A0G4EFM9_VITBC1.210e-2326.97Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
A0A7S0LLM9_9EUKA1.710e-2130.41Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A7S2B0Z3_9STRA1.000e-1429.47Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
B8C3R0_THAPS2.720e-1123.83Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S2WT35_9STRA1.270e-525.38Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig9contigEcto-sp6_S_contig9:10687..14752 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score921.8
Seed ortholog evalue1.6e-265
Seed eggNOG ortholog2880.D7G762
Model size2344
Hectar predicted targeting categoryother localisation
Exons5
EggNOG OGs29PU5@1,2RX60@2759
Cds size1755
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig9.17986.1prot_Ecto-sp6_S_contig9.17986.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig9 11276..14752 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350515.3050604-UTR-Ecto-sp6_S_contig9:10686..112751682350515.3050604-UTR-Ecto-sp6_S_contig9:10686..11275Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig9 10687..11275 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350515.316561-CDS-Ecto-sp6_S_contig9:11275..115541682350515.316561-CDS-Ecto-sp6_S_contig9:11275..11554Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 11276..11554 -
1682350515.326144-CDS-Ecto-sp6_S_contig9:12038..121831682350515.326144-CDS-Ecto-sp6_S_contig9:12038..12183Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 12039..12183 -
1682350515.3393836-CDS-Ecto-sp6_S_contig9:12524..128811682350515.3393836-CDS-Ecto-sp6_S_contig9:12524..12881Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 12525..12881 -
1682350515.3593085-CDS-Ecto-sp6_S_contig9:13293..140691682350515.3593085-CDS-Ecto-sp6_S_contig9:13293..14069Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 13294..14069 -
1682350515.3690891-CDS-Ecto-sp6_S_contig9:14554..147521682350515.3690891-CDS-Ecto-sp6_S_contig9:14554..14752Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig9 14555..14752 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig9.17986.1

>prot_Ecto-sp6_S_contig9.17986.1 ID=prot_Ecto-sp6_S_contig9.17986.1|Name=mRNA_Ecto-sp6_S_contig9.17986.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=585bp
MTLQVEEGSSAAAADALAARSAAASAVAKPFVSRKLGSFEKMLTQTRDGA
GPAEDGVRTLTTPHVWAAVIDGDLPRSSLKRGIEAVLARHPMLRACIRTP
DGPKEPLIDIRGEERDDGDPLYFCESECESLGALAECVLAPEEDEISGDE
AFAREWRGRLERNLDNARLPVSAGPNWRVETIRLSGRGRPGPRRRRTALV
CTMNHALEDQRSSNVMLQGILEAAAEKASGPARSADDAGGFDLPPSMEAA
IVEGKRFRRNTLRYMWRQATMAIAKPMVVPDGLPSVDERSEGGDEGPFGV
SSRKSACEFSSVPADDVSAMLQACSRERGLTLSGALSAACLMACSDVAHA
EGSRGSNRYKFLLAVDLRRFGTGDYSGMDDWTGGTVACAGGAIDYAVKVP
AGSGSRLVGRDGEEAARVAREEFWRLAERCKTATRDMVEKETLREAVAVF
DWAMENIHIWASVDMQSRNAKTLGRAYTCGVSNMGRYPFDTQGRQSFSQG
GALRNEPVSPRKFVPAQLRYDRRRAFHDAAVRRAPSHTRSRGGLLAGHHR
QPAGRLRNLLMTGGRHRLRFTHTLSKGSEGFYYY*
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mRNA from alignment at Ecto-sp6_S_contig9:10687..14752-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig9.17986.1 ID=mRNA_Ecto-sp6_S_contig9.17986.1|Name=mRNA_Ecto-sp6_S_contig9.17986.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=4066bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:10687..14752- (Ectocarpus species6 EcLAC_371)
ATGACGTTGCAGGTGGAGGAGGGGTCAAGCGCAGCAGCAGCAGACGCTCT AGCTGCTAGGAGCGCCGCCGCTAGCGCCGTGGCGAAGCCGTTCGTGAGCC GAAAGCTCGGCAGCTTCGAGAAGATGCTCACGCAAACTCGGGACGGCGCT GGCCCTGCCGAGGACGGCGTTCGGACTCTAACTACCCCGCACGTGTGGGT GAGCATTTGATATGTGGTGTGTTGGCGCTGGAGTGAATGTAGGAAGAGAG ACAGTCAGCCGGTCGTCGCGACACGCTTGTGCGCATGTTTACACCAACAG CATATATCCACGCTGTTGGTGCTCGATCGAACGTGGGCGTTGGCTGAATC TATGTAAGTGTATACATCGTTGACCTGCTGTTTGCAGTTTGCGGCTGCTG CAGTTCAGAAAAACAAAACTTCATACTGGAGTAGGGGTACTAGAGGCCGC TATTGTAACAGCCCCCTGGTGGAGAAAGGGGTCAGGCAGAGGGGGCTCGA ATCATGTTGTAGACTGCTCTGAGGACTTCGGGTTTGAAGGGGGGTGAACC CGCCAAGCCTTATTTTTCCTACATGCGCTATGATTGACTTATTCCACAAC ACCTGGGAAACATCTGGTACGAAATGCAATACGCCCATGTCTTTAACCAG AACCGAACATGTACCGCCCTTGACGCGTGTCAGGCCGCCGTGATCGACGG CGACTTGCCTAGGAGCTCGCTCAAGCGCGGGATCGAGGCGGTCCTCGCCC GCCACCCCATGCTCCGCGCTTGCATCCGCACGCCGGACGGGCCCAAGGAG CCGCTGATCGATATCCGGGGCGAGGAGCGAGATGACGGGGACCCCCTCTA CTTCTGCGAATCCGAGTGCGAATCGCTGGGGGCGCTAGCGGAGTGCGTCT TGGCCCCCGAAGAAGACGAGATCTCCGGAGATGAAGCTTTCGCGCGGGAG TGGCGAGGGCGGCTCGAGCGCAACCTGGACAACGCGCGGTTGCCGGTGTC CGCGGGCCCGAATTGGCGCGTGGAAACCATCCGCCTTTCTGGGCGGGGGA GGCCGGGTCCCCGCCGCCGCCGCACCGCCCTGGTGTGCACCATGAACCAC GCCCTCGAGGACCAACGGAGCTCGAACGTGATGCTGCAAGGGATTTTAGA GGCCGCGGCTGAGAAGGCAAGCGGCCCCGCGCGTTCAGCCGATGATGCGG GCGGGTTTGATCTGCCCCCCAGCATGGAAGCTGCGATTGTGGAGGGGAAA AGATTCCGCAGAAACACGCTGCGGTACATGTGGCGCCAGGCCACTATGGC GATCGCGAAACCCATGGTCGTACCAGACGGGCTTCCCTCTGTAGACGAGA GGAGCGAGGGGGGCGACGAGGGGCCGTTCGGGGTGTCTAGCCGGAAAAGC GCGTGCGAGTTTTCGTCGGTGCCGGCGGACGACGTATCTGCGATGCTTCA GGCGTGCAGGTACAGTAAGCGCAGGGGAGGAAACGGTCGCCGAACGTGGC ACAGAATGTTAGAGTTGGCGTGGGGGTCGTCGGGTGTTGCGTTGGGTATG GTGTGACATACAGACGCAGCAGTTGTTGCTTGGACCTGTGGTGCGTTGTC TTATATTCCCGCGTTCTCTTGTGGTAGACCGATCACCGACAGAATACCGA AATTTACGACCTACCCGACCGTGCTGCAGCTATGTTCACGCGTGCCACCA TGAACGCGGACGCATTTTAGAACTCCTAAGCGCTCGCTCAGAGGCGACGG AGCTGCTTGTAGCTGGATTTCCTGTAGGGCATGCTGCCGTTCTCTTGGGG TCCTTACCGCCCATTCGCGTTTCCCCTCCCACCTCCCTGCGCGATGATGA TGACTTCTCGCCCTCCCCGAGCAGAGAACGAGGGCTAACCCTGTCGGGAG CCCTGAGCGCCGCTTGCCTGATGGCGTGCAGCGACGTCGCCCATGCCGAG GGCAGCCGAGGGTCGAACCGCTACAAGTTCCTCCTGGCGGTTGACCTTCG GCGTTTCGGCACCGGGGATTACTCCGGCATGGACGACTGGACGGGGGGCA CCGTGGCGTGCGCGGGGGGGGCGATCGACTACGCGGTGAAGGTTCCCGCC GGGAGCGGGTCGAGGCTCGTGGGACGGGACGGGGAGGAGGCGGCGCGGGT GGCGCGGGAGGAGTTCTGGAGGCTCGCTGAGCGGTGCAAGACCGCCACGC GGGACATGGTGGAGAAGGAAACACTGAGGTAGGCGACGAAGACCGTAATA AGTCTGCCGTTGTCTGTGTGTGGTGATTGTGTTGAAAAGAATCAGCGTAC CGAGTTCCTCGTGCGTCTCAGCATTTTACGGCCTCTGTTTTGAGGACGGT GTAGTCACCTGGTTATGTACCGGTCATGACTTTCGCATCGTGCAATCAAC ATGCTCACCGCTTTCTCGAGCATCTGTAGGAACCACATTTATTTCAGAAG ACTATATCCGCTGGCTTCAGATATACTCCCGTGCCCGCCACCGAGAGAAT TTATCGCCGGACTGGCAAACTTCATGAGAAAATATCACTGATTCGGGTTC ATTCTTGGGGCTTCATCAGGGAGGCGGTGGCAGTGTTCGACTGGGCGATG GAGAACATACACATTTGGGCTTCCGTCGACATGCAGAGTCGAAACGCTAA GACCCTCGGGAGAGCCTACACGTGCGGTGTCAGCAACATGGGGCGGTACC CATTCGATACCCAGGTGCGGTGGCCTTTTGGTACAGCAGTGCGGTCGGTT TCATCCCCCTTCCTACTTGTCGGTGCTACGATGTGTGTGACGTGGACGGG ACTACATTCGTAGGCGTTTCTTGGGGGTCCTGCCGCTGTGTTCGCTCAAG TGTGGAAACCCCGACGGATGTTCAACTCATATCCACTGCTAGTATTGAAA TGAAAGCGGCCCCGTCATCGTTGAAGGAATGATTTCCTCTGCCTGACAGC AACATTGCTCAGGGACCGCTCTTGTCATTGTCAGGAGTCGGGTGGCGAAT ACTGGTGTGGGAACTTTCCGGCGGGGTTTCCCATCTTCGCGCTCTTCAAG GCCATGTCCTCGATGCGACCTCTCGACGTCCCACCGTTCGTTACGCAGCA TATTCGTGGGAGGACGGGTCTGTTGGAGATTGATTCCTCAACCTAAAACC CTCACCCATATTATTTACGTGTCGGTGCTGCCGAAACGTGGCGCGCAGGG TAGGCAATCTTTCTCTCAAGGCGGTGCACTACGGAACGAGCCAGTCAGCC CGCGGAAGTTTGTTCCAGCTCAGCTGCGGTACGATAGACGGAGAGCTTTT CATGACGCTGCAGTTCGCCGAGCCCCTTCTCACACGAGAAGCAGGGGAGG CCTACTTGCGGGGCATCATCGACAACCTGCGGGCCGCTTGCGGAATCTCC TCATGACCGGCGGAAGACACCGGTTGCGGTTTACACACACCCTCTCAAAA GGTTCGGAGGGGTTCTACTATTATTGATAATAATAATGAACGAGACTTTT AGCGGAGAACCATATCTCAGAGCGGCCAAGAAGACATGGTTGCCCTGGTA TTGTTCTCCGGGAGAATGATCACAGTTTCCTCGCAACAACCAAAACCGAA GTTGGTTTGTTGTGCCGTTGAAGTAGTCCTGTCCCCTGTTCAAAACGTGT ACAGTACGAGGCGACTATTCATCCCGTTGCGGACAGAGCACGGCCGGGAG CCAGGGTCTTCGGGGGTTGTGGTCTTCAAGAGACATTTTCGTACGGATAA AACTGCTTTTGTCATTTCCTTTTTTATGATGCACGCGAAAGTGTACTTGC TCGGAGTATACTACAGAAGCTGCTAGCGGTATAGGGGTCGAGTTCGCCTA CGACGTTCCCGACTAATGAACTGCAGTCCGAGTGCACGGAATTCGTCGCG TCCCGGCGACCGCAAGGAGGTCTGTTGCGAGGTCTTGCACGGGCGTTTTG GTTTTGGATGAATGACGGCCGTTTAGCGTGGTGAGCACATTGATACGGGT GTGCGATGCGGGCAAAGCGTGGAGAGCATGGGAATGTGTGATTCCACTTG TTGTTGGTGATTTGGC
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig9:10687..14752-

>mRNA_Ecto-sp6_S_contig9.17986.1 ID=mRNA_Ecto-sp6_S_contig9.17986.1|Name=mRNA_Ecto-sp6_S_contig9.17986.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1755bp|location=Sequence derived from alignment at Ecto-sp6_S_contig9:10687..14752- (Ectocarpus species6 EcLAC_371)
ATGACGTTGCAGGTGGAGGAGGGGTCAAGCGCAGCAGCAGCAGACGCTCT
AGCTGCTAGGAGCGCCGCCGCTAGCGCCGTGGCGAAGCCGTTCGTGAGCC
GAAAGCTCGGCAGCTTCGAGAAGATGCTCACGCAAACTCGGGACGGCGCT
GGCCCTGCCGAGGACGGCGTTCGGACTCTAACTACCCCGCACGTGTGGGC
CGCCGTGATCGACGGCGACTTGCCTAGGAGCTCGCTCAAGCGCGGGATCG
AGGCGGTCCTCGCCCGCCACCCCATGCTCCGCGCTTGCATCCGCACGCCG
GACGGGCCCAAGGAGCCGCTGATCGATATCCGGGGCGAGGAGCGAGATGA
CGGGGACCCCCTCTACTTCTGCGAATCCGAGTGCGAATCGCTGGGGGCGC
TAGCGGAGTGCGTCTTGGCCCCCGAAGAAGACGAGATCTCCGGAGATGAA
GCTTTCGCGCGGGAGTGGCGAGGGCGGCTCGAGCGCAACCTGGACAACGC
GCGGTTGCCGGTGTCCGCGGGCCCGAATTGGCGCGTGGAAACCATCCGCC
TTTCTGGGCGGGGGAGGCCGGGTCCCCGCCGCCGCCGCACCGCCCTGGTG
TGCACCATGAACCACGCCCTCGAGGACCAACGGAGCTCGAACGTGATGCT
GCAAGGGATTTTAGAGGCCGCGGCTGAGAAGGCAAGCGGCCCCGCGCGTT
CAGCCGATGATGCGGGCGGGTTTGATCTGCCCCCCAGCATGGAAGCTGCG
ATTGTGGAGGGGAAAAGATTCCGCAGAAACACGCTGCGGTACATGTGGCG
CCAGGCCACTATGGCGATCGCGAAACCCATGGTCGTACCAGACGGGCTTC
CCTCTGTAGACGAGAGGAGCGAGGGGGGCGACGAGGGGCCGTTCGGGGTG
TCTAGCCGGAAAAGCGCGTGCGAGTTTTCGTCGGTGCCGGCGGACGACGT
ATCTGCGATGCTTCAGGCGTGCAGCAGAGAACGAGGGCTAACCCTGTCGG
GAGCCCTGAGCGCCGCTTGCCTGATGGCGTGCAGCGACGTCGCCCATGCC
GAGGGCAGCCGAGGGTCGAACCGCTACAAGTTCCTCCTGGCGGTTGACCT
TCGGCGTTTCGGCACCGGGGATTACTCCGGCATGGACGACTGGACGGGGG
GCACCGTGGCGTGCGCGGGGGGGGCGATCGACTACGCGGTGAAGGTTCCC
GCCGGGAGCGGGTCGAGGCTCGTGGGACGGGACGGGGAGGAGGCGGCGCG
GGTGGCGCGGGAGGAGTTCTGGAGGCTCGCTGAGCGGTGCAAGACCGCCA
CGCGGGACATGGTGGAGAAGGAAACACTGAGGGAGGCGGTGGCAGTGTTC
GACTGGGCGATGGAGAACATACACATTTGGGCTTCCGTCGACATGCAGAG
TCGAAACGCTAAGACCCTCGGGAGAGCCTACACGTGCGGTGTCAGCAACA
TGGGGCGGTACCCATTCGATACCCAGGGTAGGCAATCTTTCTCTCAAGGC
GGTGCACTACGGAACGAGCCAGTCAGCCCGCGGAAGTTTGTTCCAGCTCA
GCTGCGGTACGATAGACGGAGAGCTTTTCATGACGCTGCAGTTCGCCGAG
CCCCTTCTCACACGAGAAGCAGGGGAGGCCTACTTGCGGGGCATCATCGA
CAACCTGCGGGCCGCTTGCGGAATCTCCTCATGACCGGCGGAAGACACCG
GTTGCGGTTTACACACACCCTCTCAAAAGGTTCGGAGGGGTTCTACTATT
ATTGA
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