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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 538 |
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Ec32 ortholog description | Hypothetical protein |
| Ec32 ortholog | Ec-16_002360.1 |
| Cds size | 516 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1682350506.8083253-UTR-Ecto-sp6_S_contig89:619662..619684 | 1682350506.8083253-UTR-Ecto-sp6_S_contig89:619662..619684 | Ectocarpus species6 EcLAC_371 | UTR | Ecto-sp6_S_contig89 619663..619684 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1682350506.8200068-CDS-Ecto-sp6_S_contig89:619684..619735 | 1682350506.8200068-CDS-Ecto-sp6_S_contig89:619684..619735 | Ectocarpus species6 EcLAC_371 | CDS | Ecto-sp6_S_contig89 619685..619735 - |
| 1682350506.8305554-CDS-Ecto-sp6_S_contig89:621790..622255 | 1682350506.8305554-CDS-Ecto-sp6_S_contig89:621790..622255 | Ectocarpus species6 EcLAC_371 | CDS | Ecto-sp6_S_contig89 621791..622255 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig89.17974.1 >prot_Ecto-sp6_S_contig89.17974.1 ID=prot_Ecto-sp6_S_contig89.17974.1|Name=mRNA_Ecto-sp6_S_contig89.17974.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=172bp
MAAARVSVRPVALTTTTVDEGVGGGVLFGDGRASATAVAVTQAATDAAMM
PPPLSPPSPSRQQQQQLLLQGEGRREGSRSAPLVVIDLEDEEEEEEEEAS
NNEDGDNDDDDDDDDLGLLSGEAVAEAAELAAAAAAAAATTPATAERAQI
GADEASLDVAKREREREPSGG* back to topmRNA from alignment at Ecto-sp6_S_contig89:619663..622255- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp6_S_contig89.17974.1 ID=mRNA_Ecto-sp6_S_contig89.17974.1|Name=mRNA_Ecto-sp6_S_contig89.17974.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=2593bp|location=Sequence derived from alignment at Ecto-sp6_S_contig89:619663..622255- (Ectocarpus species6 EcLAC_371)
ATGGCTGCTGCTCGGGTGTCTGTTAGGCCGGTGGCATTGACGACGACGAC
GGTGGACGAGGGCGTCGGGGGGGGCGTCTTGTTCGGCGACGGTCGGGCCT
CAGCGACAGCGGTGGCGGTTACACAGGCGGCGACGGACGCTGCGATGATG
CCACCGCCGCTATCGCCGCCGTCTCCGTCTCGTCAGCAGCAGCAGCAGCT
GCTGCTGCAGGGAGAAGGAAGAAGGGAGGGCAGTCGTTCGGCGCCGCTGG
TAGTCATAGACCTTGAGGACGAGGAGGAGGAAGAGGAGGAGGAGGCGTCC
AATAACGAGGACGGTGACAACGACGACGATGACGATGACGACGACCTCGG
TCTACTGTCGGGGGAGGCGGTGGCAGAGGCGGCGGAACTAGCGGCGGCGG
CGGCGGCGGCGGCGGCGACGACGCCCGCGACGGCCGAGAGGGCACAAATC
GGGGCAGACGAAGCGGTGGGCGGCGGTAGCGCCAGCCGCGGCATCAGCAG
CCTTGACAACACTCCGGAAGGCCAGCAACAGCCGCAGCACCAGCCGAATA
GCCCATTTTCAGCGACCGTTTCCCGGGCTGCGTCGTCTTCGTACCCCGCC
GTTGGTGCGCCCGTGGCTCGGAGCAGCAGCAGCAGCAGCACGTCCTCCTC
CTCGTCGTCCTCCTCTTCGGTGGAAGACGTCGACATGCCGCTGTTCGACG
AGGGCGGCGTGATCGCCATGGCCACGGACCAGGAAGAGGGCAATGGTAGC
CTGCCTGCGCTCTCGTCGCCATCCTCCTCCTTGTCGTCGCCGAGCGCCGC
CGCCGCCGCCCCCGCCCCCGCCCCCGCCCCCGCCGGTTCTCTTCACAGCG
ACTCCACGTTCCAGAGGAGCCGAAGCGACGGAAACGTCAGTGCAATCGCG
GCAGCGGCGGCGGCGGCAGCGGCGCCATACCAGCAACATGACGGCTTATT
CCGCGGGGGGAGCAACAGCGGCATACAGAGAAGGAGTGTCGGTAGCAGCA
CCAGCGGCGTTGCAGATGGCAGGCCTAGAAGGCGTGGGGTATCGCTCGGC
GGCGGTGGCGGCGGCGGCGGCACCGGTGCTGGTGGCGGCGACGGCGGCAT
GCGGTCGGGCCTCTCCCGAAAGTTTGTGCGCAGCCTGATGCGCCACCTCA
ACATGCGGGCGGACTCCCGCCAGCGGGAGGAACTCCGGTCCATGGTTGAG
ACGCTCAAGCACCGGAGCTCGGTGAGGGGGGTCGACATGAAGCAGGAGAT
CAAGCGCGAGGCCGTGTCACTCCTCGGCCCGGAGCTCGCGCGCGAAGCCT
TCGAGGCCTCGCTCTCGGAGACCCGCAGCGAGTTCCACCGCCAGCGCAGC
GCCGCCGCCGTGGCCGCCGCCGCCGCCGCCGCCGGTGCCGATGCCGCACG
CGTCGGCGGGGGCGCGGGGGCCGTCGCTGCCGCTTCCGCCGCCGCGGCCG
CCGCGGCCGCCGCGTTCCGGCGAGAGCCGTCGCCGTCGTCGTCCGGCTTG
CCGCCGGCGCTCTCCTCGCCGTTCCTGTCTGCCCGGAGGAGCACCATCGG
AGGGGGGATGATGGCGGCGGCGGGGGGGGCAGCCGGGGCGGCAGGAGCAG
CGACTACCGTAACCCGGCTGGAGAGCCAGCCGCCGCCGCGCAAGCGCCGA
AGCTTCGGGGCGGGCAGGGACAGCCTCGACAGCAACGGGGAGGAGGCGGC
CGAGGGCGGCGGCAGCGGTGTCGGCGGCGGCGTAGCCGCCGCCGCTGCAG
CCGGCGCGGCCGGAGGTGGCGCCGTCCCGGCGTTCTTTGCCCTGCCGGCG
GAGGACGTCGAGCAACGGCTGAAGGCGATCCACGCGGGCCCGTCCCACGA
GGGCTTCCACCTGTGCTGCGTCTGCCTGGACCGCCCGCGCGACGCCGCCC
TGATCCACGGGAAGACCGCCCACCAGGCGTGCTGCTACGACTGCGCCGTG
GAGCTGTTCGAGCGCGGGCTGCCGTGCCCCTACTGCCGCCAGCCCATCGC
GCACGTGGTGAAGAACTTCGTTTGACTTGGCCGTTGTAATAGATTCTTGT
GGGGCACACACACGGGGAGAGACAACGGGCGGCTCGACTTGATTGGTCCG
CTGGTGGTATTGTAGTTTAGTTTTGGGGGTCCACGAAGGCAGCAGGGCGT
GCGGGGGGGGGGTGTTGGGACTCCATCATGACTGCACCCTCGGCTCGACC
GCACACTTCCTAAACAACCTCATCTCCCCCCCTCCAGACCGTGGAGTCCG
ATTTGTTGTGTTGTTTGTCCGGAGCGTGGCATTACTATCATTGTTTTGGT
TTTCCGGGCGTGTGCGCGTTGGGGGCGGGGGGGGGGGGGCTGGCACAGAC
CGGCAAAGGGTATATAAAAACGGAGAAACTATATAGGGATTGATAGATGG
GTGCGGCACAAGCATGAAGAAGAGGAGAACCAAGTGTGGCTGGCTGCCGT
AATTTCTCTTGTTATTTTTATGAGGACTCCGCCCTCCCTTTGTGTTGCGT
TGTGGTACGTGTTTGTCCAGTCGCTCGACGTCGCCAAGAGAGAGAGAGAG
AGAGAGCCGTCGGGGGGGTGAACGGGCTGGGCTCAGCCAGCCG back to topCoding sequence (CDS) from alignment at Ecto-sp6_S_contig89:619663..622255- >mRNA_Ecto-sp6_S_contig89.17974.1 ID=mRNA_Ecto-sp6_S_contig89.17974.1|Name=mRNA_Ecto-sp6_S_contig89.17974.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=516bp|location=Sequence derived from alignment at Ecto-sp6_S_contig89:619663..622255- (Ectocarpus species6 EcLAC_371)
ATGGCTGCTGCTCGGGTGTCTGTTAGGCCGGTGGCATTGACGACGACGAC
GGTGGACGAGGGCGTCGGGGGGGGCGTCTTGTTCGGCGACGGTCGGGCCT
CAGCGACAGCGGTGGCGGTTACACAGGCGGCGACGGACGCTGCGATGATG
CCACCGCCGCTATCGCCGCCGTCTCCGTCTCGTCAGCAGCAGCAGCAGCT
GCTGCTGCAGGGAGAAGGAAGAAGGGAGGGCAGTCGTTCGGCGCCGCTGG
TAGTCATAGACCTTGAGGACGAGGAGGAGGAAGAGGAGGAGGAGGCGTCC
AATAACGAGGACGGTGACAACGACGACGATGACGATGACGACGACCTCGG
TCTACTGTCGGGGGAGGCGGTGGCAGAGGCGGCGGAACTAGCGGCGGCGG
CGGCGGCGGCGGCGGCGACGACGCCCGCGACGGCCGAGAGGGCACAAATC
GGGGCAGACGAAGCGTCGCTCGACGTCGCCAAGAGAGAGAGAGAGAGAGA
GCCGTCGGGGGGGTGA back to top
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