mRNA_Ecto-sp6_S_contig89.17968.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig89.17968.1 vs. uniprot
Match: D8LK86_ECTSI (Harp (Smarcal1)-related n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK86_ECTSI) HSP 1 Score: 1454 bits (3765), Expect = 0.000e+0 Identity = 1078/1219 (88.43%), Postives = 1084/1219 (88.93%), Query Frame = 1
Query: 1 MSSWIKVTVVLHSLEPPRFGLRHPYSNALIAVYKAISDSVFDHPNRLWHFPLSSRTEVVKRVRGVAGTEIEDLPPFVEALLASIKKDDSDALSEQEMKDEISLRMESVPEGLMSTLYQFQAGYPLFAIRKKGKLLLGDEMGLGKTLQALAVACAYREDWPVLVVAPSSLKDNWRNEAMKWVPGLTKETIQIVRGAKEGVRDSAQLVIVSYDLATRMVEKSLLWKGQFEIVIADESHYLKSVDAKRSQAVVPLMQKASRAICVTGTPALSRPAELFMQLKALMPQAFRTFHPFAVRRVDAVSPYCAAFQGPFGLDVTGSSNSAELKMILEAAIMVRRLKEEVAELMEQKEAIKASLGSVADDAEMGRLVGQMKSLTTKLYIESGRAKIQGVLDHLRGMLTEELPAEGHPPGGGVSPNRTGGGGTPTAXXXXXXXXXXXXXK-------------SATPPLPRGKGPGGLWGKVSVDDGXXXXXXXXXEWACSRCTYHNPASQRECDLCDTPRSVVAAAPGAKQAGSSSEXXXXXXXXXXXXXXXXXXXXXXXXDNGKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKRRLVKAEEEDNEAVAVDSGSDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPVPGKGRRSGXXXXXXXXXXXXXXXXXX--RYGDDVSSDEGLDSSXXXXXXXXDFILTKKRGKLPAKGLLSSGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAKEPRKLVVFAHHKEVMDALERGLDEIGVCSVRIDGSTAQQKKRQPIVDRFQGSASVSVILLSITAAGVGITLTAASCAVFAELYWTPGSMAQAEDRIHRIGQKAKTVLIRYLVGRGTMDDGVISTIHRKQTTLRSTVGLNRDAGGYSNVPGREHRLLSPGNTPSPVPLPVGGTKGGGRLRLSPSRRFLAMPASMLYRPERSQRKLEFAPAASXXXXXXXXXXXXXXXXXXXXXXXXXWLPPSPEENGASSSLSPGRLQQGVDCVDLSGSPTREGGMPSSSSS-PHRLDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---SLPQQASPRTQPSPTXXXXXXXXXXXXXXXXXXXXXLPSGGETNASAVRRTAVGGGAGTSQQSGSQPLSAGSQIEGRQATTVGGDGAAKATTVLSAQVQ 3600
MSSWIKVTVVLHSLEPPRFGLRHPYSNALIAVYKAISDSVFDHPNRLWHFPL RTEVVK+VRGVAGTEIEDLPPFVE LLASIKKD SDALSEQEMKDEISLRMESVPE LMSTLYQFQ FAIRKKGKLLLGDEMGLGKTLQALAVACAYREDWPVLVVAPSSLKDNWRNEAMKWVPGLTKE IQIVR AK GVRDSAQLVIVSYDLATRMVEKSLLWKGQFEIVIADESHYLKSVDAKRSQAVVPLMQKASRAICVTGTPALSRPAELFMQLKALMPQAFRTFHPFAVR YCAAFQGPFGLDVTGSSNSAELKMILEAAIMVRRLKEEVAELMEQKEAIK+SLGSVADDAEMGRLVGQMKSLTTKLYIESGRAKIQGVLDHLRGMLTEELPAEGHPPGGGVSPNRTGGGGTP XXXXXXXXXXXXX SATPPLPRGKGPGGLWG VSVDDG XXXXXXEWACSRCTYHNPASQRECDLCDTPRSV AAAPGAKQAGSS XXXXXXXXXXXXXXXXXXXXXX +NGKDXXXXXX XXXX RKRRLVKAEE NEAVAVDS XXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LPVPGKGRRSGXXXXXXXXXXXXXXXXXX RYGDDVSSDEGLD XXXXXXXX FILTKKRGKLPAK LLSSGGK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX KAKEPRKLVVFAHHKEVMDALERGLDEIGVCSVRIDGSTAQ KKRQPIVDRFQGSASVSVILLSITAAGVGITLTAASCAVFAELYWTPGSMAQAEDRIHRIGQKAKTVLIRYLVGRGTMDDGVISTIHRKQTTLRSTVGLNRDAGGYSNVPGREHRLLSPGNTPSPVP PVGGTK AMP SMLYRPERSQRKLEFAPAASXXXXXXXXXXXXXXXXXXX WLPPSPEE ASSSLS GRLQQGVDCVDLSGSPTREGG+PSSSSS PHRLDG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SLPQQ SP+TQPSPT XXXXXXXXXXXXXXX L SG ETNASAV+ TAVGGGAGTSQQSGSQPLSAGSQ EGRQATTVG AAKATTVLSAQVQ
Sbjct: 1 MSSWIKVTVVLHSLEPPRFGLRHPYSNALIAVYKAISDSVFDHPNRLWHFPLGLRTEVVKKVRGVAGTEIEDLPPFVETLLASIKKDGSDALSEQEMKDEISLRMESVPEDLMSTLYQFQVECLRFAIRKKGKLLLGDEMGLGKTLQALAVACAYREDWPVLVVAPSSLKDNWRNEAMKWVPGLTKEAIQIVRDAKMGVRDSAQLVIVSYDLATRMVEKSLLWKGQFEIVIADESHYLKSVDAKRSQAVVPLMQKASRAICVTGTPALSRPAELFMQLKALMPQAFRTFHPFAVR-------YCAAFQGPFGLDVTGSSNSAELKMILEAAIMVRRLKEEVAELMEQKEAIKSSLGSVADDAEMGRLVGQMKSLTTKLYIESGRAKIQGVLDHLRGMLTEELPAEGHPPGGGVSPNRTGGGGTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSATPPLPRGKGPGGLWGNVSVDDGDEGXXXXXXEWACSRCTYHNPASQRECDLCDTPRSVAAAAPGAKQAGSSXXXXXXXXXXXXXXXXXXXXXXXXRAENGKDXXXXXXDAWIVDSDEXXXXVRGSGKKVGGRKRRLVKAEEXXNEAVAVDSXXXXXXXXXXXXXXXXXXXGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEVEVLPVPGKGRRSGXXXXXXXXXXXXXXXXXXXGRYGDDVSSDEGLDXXXXXXXXXXXFILTKKRGKLPAKDLLSSGGKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSSASKAKEPRKLVVFAHHKEVMDALERGLDEIGVCSVRIDGSTAQ-KKRQPIVDRFQGSASVSVILLSITAAGVGITLTAASCAVFAELYWTPGSMAQAEDRIHRIGQKAKTVLIRYLVGRGTMDDGVISTIHRKQTTLRSTVGLNRDAGGYSNVPGREHRLLSPGNTPSPVPPPVGGTK--------------AMPVSMLYRPERSQRKLEFAPAASXXXXXXXXXXXXXXXXXXXDPTTASWLPPSPEEKWASSSLSSGRLQQGVDCVDLSGSPTREGGIPSSSSSSPHRLDGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPSLPQQTSPQTQPSPTSSIPXXXXXXXXXXXXXXXMQLSSGDETNASAVKTTAVGGGAGTSQQSGSQPLSAGSQREGRQATTVGXXXAAKATTVLSAQVQ 1197
BLAST of mRNA_Ecto-sp6_S_contig89.17968.1 vs. uniprot
Match: A0A6H5JCM3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCM3_9PHAE) HSP 1 Score: 713 bits (1841), Expect = 3.410e-234 Identity = 745/1016 (73.33%), Postives = 751/1016 (73.92%), Query Frame = 1
Query: 1189 MLTEELPAEGHPPGGGVSPNRTGGGGTPTAXXXXXXXXXXXXX-----KSATPPLPRGKGPGGLWGKVSVDDGXXXXXXXXXEWACSRCTYHNPASQRECDLCDTPRSVVAAAPGAKQAGSSSEXXXXXXXXXXXXXXXXXXXXXXXXDNGKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKRR-LVKAEEEDNEAVAVDSGSDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-LPVPGKGRRSGXXXXXXXXXXXXXXXXXXRYGDDVSSDEGLDSSXXXXXXXXDFILTKKRGKLPAKGLLSSGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAKEPRKLVVFAHHKEVMDALERGLDEIGVCSVRIDGSTAQQKKRQPIVDRFQGSASVSVILLSITAAGVGITLTAASCAVFAELYWTPGSMAQAEDRIHRIGQKAKTVLIRYLVGRGTMDDGVISTIHRKQTTLRSTVGLNRDAGGYSNVPGREHRLLSPGNTPSPVPLPVGGTKGGGRLRLSPSRRFLAMPASMLYRPERSQRKLEFAPAASXXXXXXXXXXXXXXXXXXXXXXXXXWLPPSPEENGASSSLSPGRLQQGVDCVDLSGSPTREGGMPSSSSSPHRLDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLPQQASPRTQPSPTXXXXXXXXXXXXXXXXXXXXXLPSGGETNASAVRRTAVGGGAGTSQQSGSQPLSAGSQIEGRQATTVGGDGAAKATTVLSAQVQERIARNKAMALERLAQRKKQXXXXXXXXXXXXXRCSPNPQILSQGSSNGNNSCGTSPYSQQEQDRPPREKPLRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPXXQARWQHQQSVWKQHRD-------------------------------------------------------ETGVGEWAGDETATPKRPTATIRRSAD 4050
MLTEELPAEGHPPGGGVSPN TG XXXXXXXXXXXX KSATPPLPRGKGPGGL G VSVD G XXXXX EWACSRC YHNPASQ ECDLCDTPRSVVAAAP AKQAGS XXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXX LVKAEEEDNE V VDSGSD XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LPV GKGRRSG XXXXXXXXXXXX Y DDVSSDE L SS DF+LTKKRGK PAKGLLSSGGK XXXXXXXXXXXXXXXXXXXXXXXXXXXX AKEPRKLVVFAHHKEVMDALERGLDEIGVCSVRIDGSTAQ KKRQPIVDRFQGS+SVSVILLSITAAGVGITLTAASCAVFAELYWTPGSMAQAEDRIHRIGQKAKTVLIRYLVGRGTMDDG+ISTIHRKQTTLRSTVGLNRDAGGYSNVPGREHRLLSPGNTPSPVP P AMP SMLYR ERSQRKLEFAPAA XXXXXXXXXXXXXXXXXXXXXX E NGASSSLSP RLQQGVDCVDLSG PTR GG PSS PH LDG XXXXXXX SLPQQASPRTQPS T XXXXXXXXXXXXXXX AGTS QSGSQPLSAGSQ EGRQAT VGGDGAAKATTVLSAQVQERIARNKAMALERLAQRKKQXXXXXXXXXXXX R SPNPQILSQGSSNG+NSCG SPYSQQ+QDR PRE RQ XXXXXXXXXXXXXXX P QARWQHQQSVWKQHR+ GVG AGDETATPKRPTAT RRSAD
Sbjct: 1 MLTEELPAEGHPPGGGVSPNGTGXXXXXXXXXXXXXXXXXXXAAVVGGKSATPPLPRGKGPGGLRGNVSVDGGGEXXXXXGGEWACSRCAYHNPASQLECDLCDTPRSVVAAAPRAKQAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVKAEEEDNEPVDVDSGSDHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLPVAGKGRRSGGGSHLRXXXXXXXXXXXXXYCDDVSSDESLHSSGDD-----DFVLTKKRGKQPAKGLLSSGGKGKGMGRGVRGDAIGKRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKEPRKLVVFAHHKEVMDALERGLDEIGVCSVRIDGSTAQ-KKRQPIVDRFQGSSSVSVILLSITAAGVGITLTAASCAVFAELYWTPGSMAQAEDRIHRIGQKAKTVLIRYLVGRGTMDDGMISTIHRKQTTLRSTVGLNRDAGGYSNVPGREHRLLSPGNTPSPVPPP-------------------AMPVSMLYRRERSQRKLEFAPAAPSEQXXXXXXXXXXXXXXXXXXXXXXXX--XSEVNGASSSLSPSRLQQGVDCVDLSGCPTR-GGRPSS---PHGLDGGGXXXXXXXVSPCLPAAKAAGPAPATASSGP-----SLPQQASPRTQPSHTSSIPPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----AGTSHQSGSQPLSAGSQREGRQATAVGGDGAAKATTVLSAQVQERIARNKAMALERLAQRKKQXXXXXXXXXXXXRR-SPNPQILSQGSSNGDNSCGRSPYSQQQQDRSPRENAPRQQTWKEQRAQNRXXXXXXXXXXXXXXXT---PQQQARWQHQQSVWKQHREFHRSRRGGRSAAGSGRGAGGDHGFCAEGVARYVGGGGSSSGVVGGLWSESXXXXXXXGVGASAGDETATPKRPTATTRRSAD 972
BLAST of mRNA_Ecto-sp6_S_contig89.17968.1 vs. uniprot
Match: A0A507EUN4_9FUNG (Uncharacterized protein n=1 Tax=Spizellomyces sp. 'palustris' TaxID=117820 RepID=A0A507EUN4_9FUNG) HSP 1 Score: 239 bits (610), Expect = 5.690e-63 Identity = 148/405 (36.54%), Postives = 227/405 (56.05%), Query Frame = 1
Query: 73 YSNALIAVYKAISDSVFDHPNRLWHFPLSSRTEVVKRVRGVAGT----EIEDLPPFVEALLASIKKD---DSDALSEQEMKDEISLRMESVPEGLMSTLYQFQAGYPLFAIRKKGKLLLGDEMGLGKTLQALAVACAYREDWPVLVVAPSSLKDNWRNEAMKWVPGLTKETIQIVRGAKEGVRDSAQLVIVSYDLATRMVEKSLLWKGQFEIVIADESHYLKSVDAKRSQAVVPLMQKASRAICVTGTPALSRPAELFMQLKALMPQAFRTFHPFAVRRVDAVSPYCAAFQGPFGLDVTGSSNSAELKMILEAAIMVRRLKEEV------------------------AELMEQKEAIKASLGSV---ADDAEMGRLVGQMKSLTTKLYIESGRAKIQGVLDHLR 1185
+ A+ +++A+ D+ +D ++W F + EV+K++ + I +LP FV LL + +K DS+ L + K +P + L +FQ L AI+K+GK+LLGDEMGLGKT+QA+A+ YR +WPV+V+ PSSL+ W+ E KW+ L +ETIQ++ +K+ V VI SYDLA+R K L K +++IV+ADESH+LKS +AKR++ +VPL+++A RA+ ++GTPALSRP ELF Q+ AL+P +F T F +R YC Q +G D TG+SN EL LE +++RRLK++V A LM Q E I L ++ + + +S ++Y ++G AK+ V ++LR
Sbjct: 15 FHEAIPKIFQAVKDAEWDSDAKVWIFDAARYDEVIKKLEDLKNVGFLPRINELPTFVHKLLKTPQKSTETDSNILQSMQTK---------IPPSVYERLMEFQKVGVLEAIKKQGKVLLGDEMGLGKTIQAIAICAFYRNEWPVMVICPSSLRLTWQAEICKWLD-LPEETIQVIFASKDRVSSERHFVITSYDLASREDIKKQLEKAKYQIVVADESHFLKSREAKRTKKIVPLLKRAKRALLLSGTPALSRPIELFTQISALVP-SFTTAVQFGIR-------YCDGKQNRYGWDFTGNSNIGELHWFLEQTVLIRRLKKDVLKELPSKTRQCVYVDIAAQSKQTFAVLMAQNEEINERLEDAKRASNTKHRQEVTLEKRSFLIQMYRQTGIAKLPAVQEYLR 401
BLAST of mRNA_Ecto-sp6_S_contig89.17968.1 vs. uniprot
Match: A0A0L0H6Z5_SPIPD (Uncharacterized protein n=2 Tax=Spizellomyces punctatus (strain DAOM BR117) TaxID=645134 RepID=A0A0L0H6Z5_SPIPD) HSP 1 Score: 238 bits (606), Expect = 6.860e-62 Identity = 153/428 (35.75%), Postives = 235/428 (54.91%), Query Frame = 1
Query: 4 SSWIKVTVVLHSLEPPRFGLRHPYSNALIAVYKAISDSVFDHPNRLWHFPLSSRTEVVKRVRGVAGT----EIEDLPPFVEALLASIKKD---DSDALSEQEMKDEISLRMESVPEGLMSTLYQFQAGYPLFAIRKKGKLLLGDEMGLGKTLQALAVACAYREDWPVLVVAPSSLKDNWRNEAMKWVPGLTKETIQIVRGAKEGVRDSAQLVIVSYDLATRMVEKSLLWKGQFEIVIADESHYLKSVDAKRSQAVVPLMQKASRAICVTGTPALSRPAELFMQLKALMPQAFRTFHPFAVRRVDAVSPYCAAFQGPFGLDVTGSSNSAELKMILEAAIMVRRLKEEV------------------------AELMEQKEAIKASLG---SVADDAEMGRLVGQMKSLTTKLYIESGRAKIQGVLDHLR 1185
SS I++T+ + + + + A+ ++ A+ D+ +D ++W F EV+K++ + I +LP FV LL + +K DS+ L + K +P + L FQ L AI+K+GK+LLGDEMGLGKT+QA+A+ YR +WPV+V+ PSSL+ W+ E KW+ L +E IQ++ +K+ V + VI SYDLA+R K L K ++ IV+ADESH+LKS +AKR++ ++PL++ A RA+ ++GTPALSRP ELF Q+ AL+P +F T F VR YC Q +G D TG+SN AEL LE +++RRLK++V A LM Q E I L + ++ + + ++L ++Y E+G AK+ V ++LR
Sbjct: 92 SSIIEITLTVRDVS--HICAKTSFHEAIPKIFHAVKDAEWDSEAKVWIFDSGRYDEVIKKLEDLKNDGFLPRINELPTFVHKLLKTPQKSTETDSNILQSMQTK---------IPPYVYERLMDFQKVGVLEAIKKQGKVLLGDEMGLGKTIQAIAICAFYRSEWPVMVICPSSLRLTWQAEICKWLD-LPEERIQVIFASKDRVSSESHFVITSYDLASREDIKKQLEKAKYRIVVADESHFLKSREAKRTKTIIPLLKGAKRALLLSGTPALSRPIELFTQISALLP-SFTTAVQFGVR-------YCDGKQNRYGWDFTGNSNIAELHWFLEQTVLIRRLKKDVLKELPSKTRQCVYVDIAAKSKQTFAALMAQNEEINERLEDAKTASNTKHRQEVTLEKRTLLIQMYRETGIAKLPAVQEYLR 499
BLAST of mRNA_Ecto-sp6_S_contig89.17968.1 vs. uniprot
Match: A0A7J8FU09_MOLMO (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 n=1 Tax=Molossus molossus TaxID=27622 RepID=A0A7J8FU09_MOLMO) HSP 1 Score: 226 bits (576), Expect = 7.460e-61 Identity = 145/375 (38.67%), Postives = 224/375 (59.73%), Query Frame = 1
Query: 52 RFGLRHPYSNALIAVYKAISDSVFDHPNRLWHFPLSSRTEVVKRVRGVAGTEIEDLPPFVEALLASIKKDDSDALSEQEMKDEISLRMESVPEGLMSTLYQFQAGYPLFAIRKKGKLLLGDEMGLGKTLQALAVACAYREDWPVLVVAPSSLKDNWRNEAMKWVPGLTKETIQIVRGAKEGVRDSAQLV-IVSYDLATRMVEKSLLWKGQFEIVIADESHYLKSVDAKRSQAVVPLMQKASRAICVTGTPALSRPAELFMQLKALMPQAFRTFHPFAVRRVDAVSPYCAAFQGPFGLDVTGSSNSAELKMILEAAIMVRRLKEEVAELM--EQKEAIKASLGSVADDAEMGRLVGQMKSLTTK-LYIESGRAKIQ 1164
RF YS LIA++K + +D R W+F L ++++RVR + ++ LP + AS + S +L+ + ++S V L+S+L FQ FAI K G+LLL D+MGLGKT+QA+ +A YR++WP+LVV PSS++ W ++W+P LT E I +V K+ R +A LV IVS+DL +++ EK L K F++VI DESH+LK++ R +A +P+++ A RA+ ++GTPA+SRPAEL+ Q+ A+ P F FH F +R YC A + +G D +GSSN ELK++LE A+M+RRLK +V + +Q++ + A+ G ++ A L + +TTK I +AK+Q
Sbjct: 53 RFEADIGYSQELIALFKQMDSRNYDVKTRKWNFLLEEHNKLMERVRCLPQVQLNPLPKTLTLAFASQLERTSLSLTADVPEADLS----GVDPKLVSSLLPFQRAGVNFAIAKGGRLLLADDMGLGKTVQAICIAAFYRKEWPLLVVVPSSVRFTWEQAFLRWLPSLTPEHINVVVTGKD--RLTAGLVNIVSFDLLSKL-EKQL--KTPFKVVIIDESHFLKNIKTARCRAAMPILKVAKRAVLLSGTPAMSRPAELYTQIIAVKPTFFPQFHAFGLR-------YCDAKRHQWGWDYSGSSNLGELKLLLEEAVMLRRLKSDVLSQLPAKQRKMVVAAPGRISAKARAS-LDAAAREMTTKDKSIMKMKAKLQ 410
BLAST of mRNA_Ecto-sp6_S_contig89.17968.1 vs. uniprot
Match: A0A671Z2H1_SPAAU (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 n=4 Tax=Sparidae TaxID=8169 RepID=A0A671Z2H1_SPAAU) HSP 1 Score: 235 bits (599), Expect = 4.330e-60 Identity = 151/416 (36.30%), Postives = 230/416 (55.29%), Query Frame = 1
Query: 4 SSWIKVTVVLHS----LEPPRFGLRHPYSNALIAVYKAISDSVFDHPNRLWHFPLSSRTEVVKRVRGVAGTEIEDLP-PFVEALLASIKKDDSDALSEQEMKDEISLRMESVPEGLMSTLYQFQAGYPLFAIRKKGKLLLGDEMGLGKTLQALAVACAYREDWPVLVVAPSSLKDNWRNEAMKWVPGLTKETIQIVRGAKEGVRDSAQLVIVSYDLATRMVEKSLLWKGQFEIVIADESHYLKSVDAKRSQAVVPLMQKASRAICVTGTPALSRPAELFMQLKALMPQAFRTFHPFAVRRVDAVSPYCAAFQGPFGLDVTGSSNSAELKMILEAAIMVRRLKEEVAELMEQKEA-------------IKASLGSVADDAEMG-RLVGQMKSLTTKLYIESGRAKIQGVLDHLRGML 1194
+ W K VL + +F + Y+ +IA +K + +D R W F L ++ R+ G+A E+E LP V+A AS D S+A S + ++S S+ L +L FQ FA+ K+G+LLL D+MGLGKT+QA+ +A YR +WP+LVVAPSS++ W +W+P L+ ++I +V AK+ +R S + IVSYDL +RM ++ F ++I DESH+LK++ R +A +PL++ A R I ++GTPA+SRP+EL+ Q+ A+ P F FH F +R YCAA Q +G D +GSSN ELK++LE +M+RRLK EV + K+ IKA+L + A G R + K Y + AK+Q +++++ ML
Sbjct: 296 NGWQKPGAVLQGQCILVSRTKFEVDVGYNADVIAAFKQMPTKNYDMKTRKWSFLLEDYKRLMDRLSGIAAVEVEPLPRAVVQAFSASF--DGSEAKSLDVPEADLS----SIDPSLTCSLMPFQREGVNFAVSKQGRLLLADDMGLGKTVQAICIAAYYRNEWPLLVVAPSSVRFTWAEAFRRWLPSLSPDSINVVVKAKDNLR-SGLVNIVSYDLLSRMDKQQP--GNPFSVLIMDESHFLKNIKTARCKAALPLLKAAKRVILLSGTPAMSRPSELYTQILAVRPTLFPRFHEFGMR-------YCAAKQMTWGWDYSGSSNLGELKLLLEECLMLRRLKSEVLSQLPAKQRKVVTVTIDGINTRIKAALSAAAKQLSKGHRNKMEEKEALLVFYNHTAEAKLQAIMEYITDML 695
BLAST of mRNA_Ecto-sp6_S_contig89.17968.1 vs. uniprot
Match: G3NRS3_GASAC (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 n=2 Tax=Gasterosteus aculeatus TaxID=69293 RepID=G3NRS3_GASAC) HSP 1 Score: 229 bits (584), Expect = 4.910e-60 Identity = 139/396 (35.10%), Postives = 221/396 (55.81%), Query Frame = 1
Query: 52 RFGLRHPYSNALIAVYKAISDSVFDHPNRLWHFPLSSRTEVVKRVRGVAGTEIEDLPP-FVEALLASIKKDDSDALSEQEMKDEISLRMESVPEGLMSTLYQFQAGYPLFAIRKKGKLLLGDEMGLGKTLQALAVACAYREDWPVLVVAPSSLKDNWRNEAMKWVPGLTKETIQIVRGAKEGVRDSAQLVIVSYDLATRMVEKSLLWKGQFEIVIADESHYLKSVDAKRSQAVVPLMQKASRAICVTGTPALSRPAELFMQLKALMPQAFRTFHPFAVRRVDAVSPYCAAFQGPFGLDVTGSSNSAELKMILEAAIMVRRLKEEVAELMEQKEA-------------IKASLGSVADDAEMGRLVG-QMKSLTTKLYIESGRAKIQGVLDHLRGML 1194
RF + Y LIAV+K+IS ++ + W+F L +++ + G+A E+E LP V+A A D ++A S D + + + L +L FQ FA+ K+G+LLL D+MGLGKT+QA+ +A YR +WP+LVVAPSS++ W +W+P L+ + I +V AK+ +R S + I+SYDL +RM + L +F ++I DE H+LK++ R +A +PL++ A R I ++GTPA+SRP+EL+ Q+ A+ P F FH F +R YC A Q +G D +GSSN EL+++L+ +M+RRLK +V + K+ +KA+L + A G + K Y + AK+Q +++++ ML
Sbjct: 116 RFRVEVGYHVGLIAVFKSISSKNYEPATKFWNFSLEDYQQLMDLLSGIAAVEVEPLPKAVVQAFFARF--DGTEARS----SDVPAADLSGIDPSLTCSLMPFQRDGVNFAVSKQGRLLLADDMGLGKTVQAICIAAYYRSEWPLLVVAPSSVRFTWAEAFRRWLPSLSPDRINVVVKAKDDLR-SGLVNIISYDLLSRMDKLQL--GHRFNVLIMDECHFLKNMKTARCKAALPLLKAAKRVILLSGTPAMSRPSELYTQILAVRPTLFPRFHEFGMR-------YCGATQSTWGWDYSGSSNLGELRLLLDECLMIRRLKSDVLSQLPAKQRKVVTVTIDGGNTRVKAALSAAAKRLANGHQNKIEEKQALLVFYNHTAEAKLQAIMEYITDML 495
BLAST of mRNA_Ecto-sp6_S_contig89.17968.1 vs. uniprot
Match: A0A8D2J137_VARKO (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 n=7 Tax=Varanus komodoensis TaxID=61221 RepID=A0A8D2J137_VARKO) HSP 1 Score: 235 bits (599), Expect = 6.170e-60 Identity = 144/397 (36.27%), Postives = 228/397 (57.43%), Query Frame = 1
Query: 52 RFGLRHPYSNALIAVYKAISDSVFDHPNRLWHFPLSSRTEVVKRVRGVAGTEIEDLP-PFVEALLASIKKDDSDALSEQEMKDEISLRMESVPEGLMSTLYQFQAGYPLFAIRKKGKLLLGDEMGLGKTLQALAVACAYREDWPVLVVAPSSLKDNWRNEAMKWVPGLTKETIQIVRGAKEGVRDSAQLV-IVSYDLATRMVEKSLLWKGQFEIVIADESHYLKSVDAKRSQAVVPLMQKASRAICVTGTPALSRPAELFMQLKALMPQAFRTFHPFAVRRVDAVSPYCAAFQGPFGLDVTGSSNSAELKMILEAAIMVRRLKEEVAELMEQKEA-------------IKASLGSVADDAEMG-RLVGQMKSLTTKLYIESGRAKIQGVLDHLRGML 1194
RF + Y+ ++I V+K ++ +D R W+F L +++ VR + E+E LP P V+A A K S A D + + V +++ L FQ FAI +KG+LLL D+MGLGKT+QA+ +A YR++WP+LV+APSS++ W KW+P L+ +T+ ++ +K+ + +A+L+ IVS+DL ++M +K L K F++VI DESH+LK+ R +A +PL++ A R I ++GTPA+SRPAEL+ Q+ A+ P F FH F +R YC A Q P+G D +GSSN ELK++LE +IM+RRLK +V + K+ KA+L + A + G + + K Y + AKI +++++ +L
Sbjct: 346 RFEVDIGYAASIIGVFKQVNSRNYDMKTRKWNFLLQDYLRLIELVRSLPEIEVEPLPKPIVQAFAAQFKTSVSKAA------DIPQVDLSEVEPKVVAALMPFQREGVNFAISRKGRLLLADDMGLGKTIQAICIAAYYRKEWPLLVIAPSSVRYTWAEAFYKWLPSLSPDTVSVIATSKDCL--TARLINIVSFDLLSKM-QKQL--KTTFQVVIVDESHFLKNGKTARCRAALPLLKAAKRVILLSGTPAMSRPAELYTQIAAIRPSFFPQFHAFGLR-------YCDAKQSPWGWDYSGSSNLGELKLLLEESIMIRRLKSDVLSQLPAKQRKVVVVASEGMNARTKAALKAAAKEMAKGYKSKQEEKEALILFYNRTAEAKIHCIIEYILELL 724
BLAST of mRNA_Ecto-sp6_S_contig89.17968.1 vs. uniprot
Match: A0A3P8VTY7_CYNSE (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 n=1 Tax=Cynoglossus semilaevis TaxID=244447 RepID=A0A3P8VTY7_CYNSE) HSP 1 Score: 233 bits (595), Expect = 9.550e-60 Identity = 141/414 (34.06%), Postives = 233/414 (56.28%), Query Frame = 1
Query: 4 SSWIKVTVVLHS----LEPPRFGLRHPYSNALIAVYKAISDSVFDHPNRLWHFPLSSRTEVVKRVRGVAGTEIEDLPPFVEALLASIKKDDSDALSEQEMKDEISLRMESVPEGLMSTLYQFQAGYPLFAIRKKGKLLLGDEMGLGKTLQALAVACAYREDWPVLVVAPSSLKDNWRNEAMKWVPGLTKETIQIVRGAKEGVRDSAQLVIVSYDLATRMVEKSLLWKGQFEIVIADESHYLKSVDAKRSQAVVPLMQKASRAICVTGTPALSRPAELFMQLKALMPQAFRTFHPFAVRRVDAVSPYCAAFQGPFGLDVTGSSNSAELKMILEAAIMVRRLKEEVAELMEQKEA-------------IKASLGSVADDAEMGRLVGQMKSLTTKLYIESGRAKIQGVLDHLRGML 1194
+SW K L + P +F + Y +IA +K + +D R W F L +++ R+ G+A E+E LP + ++ + +DA++ + ++S ++ L S+L FQ FA+ K+G+LLL D+MGLGKT+QA+ +A YR++WP+LVV+PSS++ W +W+P L+ ++I +V AK+ +R S + I+SYDL +RM ++ L F ++I DESH+LK++ R ++ +PL++ A R I ++GTPA+SRPAEL+ Q+ A+ P F FH F +R YC A Q +G D +GSSN EL+++L+ ++M+RRLK EV + K+ IKA+L + A + G + K Y + AK+Q +++++ ML
Sbjct: 287 NSWQKPGASLQGQCIIVSPTKFEVDIGYHADVIAAFKQMPTRNYDMKTRKWSFSLEDYKQLMDRLSGIAAVEVEPLPRALIQAFSARFEGRTDAMAVDVPEADLS----TIDPTLTSSLMPFQREGVNFAVFKQGRLLLADDMGLGKTVQAICIAAYYRDEWPLLVVSPSSVRFTWAEAFRRWLPSLSPDSINVVVKAKDNLR-SGVVNIISYDLLSRMDKQ--LPGNPFNVLIMDESHFLKNIKTARCKSALPLLKAAKRVILLSGTPAMSRPAELYTQVLAVRPTLFPRFHDFGMR-------YCDAKQSTWGWDYSGSSNLGELRLLLQESVMLRRLKSEVLSQLPSKQRKVVIVTIDGVNARIKAALTAAAKELTKGLTNKEEKDALLVFYNHTAVAKLQTIMEYITDML 686
BLAST of mRNA_Ecto-sp6_S_contig89.17968.1 vs. uniprot
Match: L8GX54_ACACA (Helicase, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GX54_ACACA) HSP 1 Score: 231 bits (589), Expect = 1.900e-59 Identity = 146/419 (34.84%), Postives = 223/419 (53.22%), Query Frame = 1
Query: 19 VTVVLHSLEPPRFGLRHPYSNA--LIAVYKAISDSVFDHPNRLWHFPLSSRTEVVKRVRGVAGTEIED-LPPFVEALLASIKKDDSDALSEQEMKDEISLRMESVPEGLMSTLYQFQAGYPLFAIRKKGKLLLGDEMGLGKTLQALAVACAYREDWPVLVVAPSSLKDNWRNEAMKWVPGLTKETIQIVRGAKEGVRDSAQLVIVSYDLATRMVEKSLLWKGQFEIVIADESHYLKSVDAKRSQAVVPLMQKASRAICVTGTPALSRPAELFMQLKALMPQAFRTFHPFAVRRVDAVSPYCAAFQGPFGLDVTGSSNSAELKMILEAAIMVRRLKEEVAELMEQKEAIKASLGSVADDAEM-GRLVGQMKS-----------------------LTTKLYIESGRAKIQGVLDHLRGML 1194
V + + ++ RFG P L Y ++ S FD ++W FPLS T K + G + LPP++ L +K + +S++++ +P GL++ LY FQ +FA+++ G+ L+ DEMGLGKTLQA+A+A Y+EDWPVLVVAPSS++ W + KW+PGL + I+++ K+ + I+SYDL R + + +F ++IADESH +KS AKR+ + PL++ A R I +TGTPALSRP ELF QL AL Q F F VR YCA Q F D +GSSN EL ++L+ +M+RRLK +V + K+ ++ LG + ++ G + ++K L +LY +G AK+ V ++++ ML
Sbjct: 263 VPIDVQLVDRERFGAAEPNKRDKWLSDFYASVPGSTFDACTKMWTFPLSCYTSFTKAIEDSRGVTLNGPLPPWIMRLFVYKEKKPLN----------MSVQLDKIPVGLLNALYPFQREGVMFALQRNGRALIADEMGLGKTLQAIAIAAYYKEDWPVLVVAPSSVRVQWADNFEKWIPGLRPDQIKVIMKTKDN--PDGLVNIISYDLVVRQTN---IAQKKFRVIIADESHTIKSWKAKRTSHLQPLLKDARRCILLTGTPALSRPEELFTQLHALDSQVFVRMTDFGVR-------YCAGHQTRFCWDYSGSSNLKELNLLLQETVMIRRLKCDVLGQLPAKKRMQVFLGIIDKHKKIIGNINDKIKEHKKMFHIAHSTDAAKSARFEAWRLIKELYHNTGTAKLPAVTEYIKEML 659 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig89.17968.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig89.17968.1 >prot_Ecto-sp6_S_contig89.17968.1 ID=prot_Ecto-sp6_S_contig89.17968.1|Name=mRNA_Ecto-sp6_S_contig89.17968.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=1351bp MSSWIKVTVVLHSLEPPRFGLRHPYSNALIAVYKAISDSVFDHPNRLWHFback to top mRNA from alignment at Ecto-sp6_S_contig89:556760..575707- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig89.17968.1 ID=mRNA_Ecto-sp6_S_contig89.17968.1|Name=mRNA_Ecto-sp6_S_contig89.17968.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=18948bp|location=Sequence derived from alignment at Ecto-sp6_S_contig89:556760..575707- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig89:556760..575707- >mRNA_Ecto-sp6_S_contig89.17968.1 ID=mRNA_Ecto-sp6_S_contig89.17968.1|Name=mRNA_Ecto-sp6_S_contig89.17968.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=4053bp|location=Sequence derived from alignment at Ecto-sp6_S_contig89:556760..575707- (Ectocarpus species6 EcLAC_371)back to top |