mRNA_Ecto-sp6_S_contig89.17958.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_Ecto-sp6_S_contig89.17958.1
Unique Name	mRNA_Ecto-sp6_S_contig89.17958.1
Type	mRNA
Organism	Ectocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)

Homology

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BLAST of mRNA_Ecto-sp6_S_contig89.17958.1 vs. uniprot
Match: A0A6H5KVJ9_9PHAE (Methionine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KVJ9_9PHAE)

HSP 1 Score: 1116 bits (2887), Expect = 0.000e+0
Identity = 572/613 (93.31%), Postives = 581/613 (94.78%), Query Frame = 1

Query:    1 MGYRQLAIAMLSLAHRSFSFVPRALTTVSSRGRARSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGHDTKEMPPYYVTTPIYYVNDKPHIGHAYTTLACDVIARFMRLDGREVMFLTGTDEHGQKVQASALKADKSPQQFCDEVSQEFRDLLKTMNFSNDRFIRTTDTSHKVAASALWNRLQERGQISLGVYAGWYSVRDEAFYGEAELVDGKAPSGAEVEWVEKEPSYFFKLSEWQQPLLDFYAENPQFIAPESRRNEAVSFVSGGLRDLSISRTSFSWGVPVPGDDEHVMYVWVDALANYISALGFPEMGEAGEFSKFWPADLHVIGKDILRFHSVYWPALLLAAGLEPPKRLFVHGWWTKDGQKISKSTGNVIDPLDLVARYGVDATRYFLMSEVPFGNDGDFSETAFQNRVNSNLANEVGNLAMRTLSMAVKNCGGQVPRPAAAAGAGDAGEGGDKALGREDFDLTPEDEELLKSAGECLGVVRPLVGETQQLHKALEAILLVSRDANKYVDFQAPWKLKKTDPDRMKTVLWVLLETIRHVGILYQPFVPEAAGKLLDQLGVPEGDARLFAALDQEGGARFSLQPGVPLDKPVPVFPRIEVPEEAVAS 1839
            MGYRQLAIAMLSLAHRS SFVPRALTT SSRGRARS              XXXXXXXXXXXX     HDTKE PPYYVTTPIYYVNDKPHIGHAYTTLACDVIARFMRLDGREVMFLTGTDEHGQKV+ASALKADKSPQQFCDEVSQEFRDLLKTMNFSNDRFIRTTD SHK AASALWNRL++RGQISLGVYAGWYSVRDEAFYGE+ELVDGKAPSGAEVEWVEKEPSYFFKLSEWQQPLLDFYAENPQFIAPESRRNEAVSFVSGGLRDLSISRTSFSWGVPVPGDDEHVMYVWVDALANYISALGFPEMGEAGEFSKFWPADLHVIGKDILRFHSVYWPALLLAAGLEPP RLFVHGWWTKDGQKISKSTGNVIDPLDLVARYGVDATRYFLMSEVPFGNDGDFSETAFQNRVNSNLANEVGNLAMRTLSMAVKNCGGQVPRPA A  AGD  EGGDKALGREDFDLTPED ELLKSAGEC+GVVRPLVGETQQLHKALEAILLVSR+AN+YVDFQAPWKLKKT+PDRMKTVLWVLLETIRHVGILYQPFVPEAAGKLLDQLGVPEGDARLFAAL+QEGGARFSLQPG PLDKPVPVFPRIEVPEEAVAS
Sbjct:    1 MGYRQLAIAMLSLAHRSSSFVPRALTTGSSRGRARSQAWSRAGTVTRMSSXXXXXXXXXXXX-----HDTKEKPPYYVTTPIYYVNDKPHIGHAYTTLACDVIARFMRLDGREVMFLTGTDEHGQKVEASALKADKSPQQFCDEVSQEFRDLLKTMNFSNDRFIRTTDASHKAAASALWNRLKDRGQISLGVYAGWYSVRDEAFYGESELVDGKAPSGAEVEWVEKEPSYFFKLSEWQQPLLDFYAENPQFIAPESRRNEAVSFVSGGLRDLSISRTSFSWGVPVPGDDEHVMYVWVDALANYISALGFPEMGEAGEFSKFWPADLHVIGKDILRFHSVYWPALLLAAGLEPPTRLFVHGWWTKDGQKISKSTGNVIDPLDLVARYGVDATRYFLMSEVPFGNDGDFSETAFQNRVNSNLANEVGNLAMRTLSMAVKNCGGQVPRPATATDAGDVDEGGDKALGREDFDLTPEDVELLKSAGECIGVVRPLVGETQQLHKALEAILLVSREANRYVDFQAPWKLKKTNPDRMKTVLWVLLETIRHVGILYQPFVPEAAGKLLDQLGVPEGDARLFAALEQEGGARFSLQPGAPLDKPVPVFPRIEVPEEAVAS 608

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BLAST of mRNA_Ecto-sp6_S_contig89.17958.1 vs. uniprot
Match: A0A836CKB9_9STRA (Methionine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKB9_9STRA)

HSP 1 Score: 692 bits (1785), Expect = 1.090e-238
Identity = 348/546 (63.74%), Postives = 403/546 (73.81%), Query Frame = 1

Query:  223 PYYVTTPIYYVNDKPHIGHAYTTLACDVIARFMRLDGREVMFLTGTDEHGQKVQASALKADKSPQQFCDEVSQEFRDLLKTMNFSNDRFIRTTDTSHKVAASALWNRLQERGQISLGVYAGWYSVRDEAFYGEAELVDGKAPSGAEVEWVEKEPSYFFKLSEWQQPLLDFYAENPQFIAPESRRNEAVSFVSGGLRDLSISRTSFSWGVPVPGDDEHVMYVWVDALANYISALGFPEMGEA----------GEFSKFWPADLHVIGKDILRFHSVYWPALLLAAGLEPPKRLFVHGWWTKDGQKISKSTGNVIDPLDLVARYGVDATRYFLMSEVPFGNDGDFSETAFQNRVNSNLANEVGNLAMRTLSMAVKNCGGQVPRPAAAAGAGDAGEGGDKALGREDFDLTPEDEELLKSAGECLGVVRPLVGETQQLHKALEAILLVSRDANKYVDFQAPWKLKKTDPD---RMKTVLWVLLETIRHVGILYQPFVPEAAGKLLDQLGVPEGDA-RLFAALDQEGGARFSLQPGVPLDKPVPVFPRIEV 1818
            PYY+TTPIYYVNDKPHIGHAYTTLACDVIARFMRLDGR+VMFLTGTDEHGQKVQ SA K  KSPQ+FCDEVSQ FR L+  M+F+ DRFIRTT+ +H  A  ALW  L+ RG I LG YAGWYSVRDEAFY E+ELVDGKAP+GA+V WVEKEPSYFF+LS+++ PLL+ Y   P+F+AP SRRNE ++FV GGLRDLSISRTSFSWGVPVPGD  HVMYVWVDALANYISALG+PE GE           G+F+KFWPADLHV+GKDILRFH+VYWPALL+AAGL+ P+RL  HGWWT+DG KISKS GNV+DP +LVARYGVD TRYFL+SEVPFG DGD+S+T    R N+NLANE GNLA R LS+  +NCG  VP P A                     LT EDE LL  A   L   R  V +TQ+L    +  L + +D NKY+D QAPWK++KT P+   R  T+L+ LLE IR   ILYQP  P  A K+LD L VP+  A R FAAL     A   +QPG  +DKP PVFPR+E+
Sbjct:   70 PYYITTPIYYVNDKPHIGHAYTTLACDVIARFMRLDGRDVMFLTGTDEHGQKVQESAAKQGKSPQEFCDEVSQSFRRLIDAMHFTPDRFIRTTEAAHAAAVQALWRALEARGAIYLGTYAGWYSVRDEAFYSESELVDGKAPTGADVAWVEKEPSYFFRLSDYEAPLLELYEREPRFVAPASRRNEVLAFVRGGLRDLSISRTSFSWGVPVPGDPAHVMYVWVDALANYISALGYPETGEGEGEAGXXQGGGQFAKFWPADLHVVGKDILRFHAVYWPALLMAAGLDVPRRLHAHGWWTRDGAKISKSVGNVVDPFELVARYGVDQTRYFLLSEVPFGADGDYSDTQLVLRCNANLANEFGNLAQRALSLVHRNCGAVVPAPGA---------------------LTAEDEALLGGARGALAACREHVADTQRLDLYCKQALALVQDGNKYIDEQAPWKVRKTGPEGEARAGTILYCLLEVIRRAAILYQPVTPLGAAKMLDALRVPDTPAARGFAALYDPAQA---IQPGTVIDKPEPVFPRLEL 591

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BLAST of mRNA_Ecto-sp6_S_contig89.17958.1 vs. uniprot
Match: A0A7S2LM79_9STRA (Methionine--tRNA ligase n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LM79_9STRA)

HSP 1 Score: 677 bits (1746), Expect = 1.560e-233
Identity = 334/534 (62.55%), Postives = 396/534 (74.16%), Query Frame = 1

Query:  223 PYYVTTPIYYVNDKPHIGHAYTTLACDVIARFMRLDGREVMFLTGTDEHGQKVQASALKADKSPQQFCDEVSQEFRDLLKTMNFSNDRFIRTTDTSHKVAASALWNRLQERGQISLGVYAGWYSVRDEAFYGEAELVDGKAPSGAEVEWVEKEPSYFFKLSEWQQPLLDFYAENPQFIAPESRRNEAVSFVSGGLRDLSISRTSFSWGVPVPGDDEHVMYVWVDALANYISALGFPEMGEAGEFSKFWPADLHVIGKDILRFHSVYWPALLLAAGLEPPKRLFVHGWWTKDGQKISKSTGNVIDPLDLVARYGVDATRYFLMSEVPFGNDGDFSETAFQNRVNSNLANEVGNLAMRTLSMAVKNCGGQVPRPAAAAGAGDAGEGGDKALGREDFDLTPEDEELLKSAGECLGVVRPLVGETQQLHKALEAILLVSRDANKYVDFQAPWKLKKTDPDRMKTVLWVLLETIRHVGILYQPFVPEAAGKLLDQLGVPEGDARLFAALDQEGGARFSLQPGVPLDKPVPVFPRIEVPE 1824
            PYY+TTPIYYVNDKPHIGHAYT++ACDV+ARFMRL GREVMFL+GTDEHGQKV+ASA K   +PQ F DEVS  FR+LL  MN SND+FIRTTD  HK A   +W  L E G I LG Y GWYSVRDE +Y E+ELVDGKAP+GAEVEWV KEPSYFFKLS+++  LL+FY +NP FIAPESR+NE +SFV GGL+DLS+SR SF WGVPVPGDD+HVMYVW+DALANYISALG+P +    ++S FWPA +H++GKDILRFH+VYWPA L+AAGL  PKRLF HGWWTKDG+KISKS GNVIDP++LV +YGVD TR+FLMSEV FG+DGDFS+     +VNSNLANE+GNLA RTLSM  KNCG  VP                     E    T EDE LL  A E   V    +   Q ++K  +A + +  DANKYVD  APW LKKTDP+RM TVL+VL+ET+RHV I+YQP +P ++  +LDQL VP  + R F  LD        ++ G P+ KPV VFPRIE+ E
Sbjct:   74 PYYITTPIYYVNDKPHIGHAYTSVACDVLARFMRLSGREVMFLSGTDEHGQKVEASAQKKGVAPQDFVDEVSMNFRELLTQMNVSNDQFIRTTDAEHKAAVQHMWTTLVENGAIYLGAYEGWYSVRDECYYNESELVDGKAPTGAEVEWVTKEPSYFFKLSDYEDKLLEFYEQNPDFIAPESRKNEVLSFVKGGLKDLSVSRMSFKWGVPVPGDDDHVMYVWIDALANYISALGYPSVDAGTKYSNFWPASVHMVGKDILRFHAVYWPAFLMAAGLPLPKRLFAHGWWTKDGEKISKSLGNVIDPVELVEKYGVDQTRFFLMSEVTFGSDGDFSDEKMVQKVNSNLANELGNLAQRTLSMVFKNCGKAVPA--------------------EIGSYTAEDEALLAKAKELREVASTAIAN-QAINKYADACISLVWDANKYVDDMAPWALKKTDPERMTTVLYVLMETLRHVAIMYQPLMPASSNAVLDQLTVP-AEERTFGHLDTS-----PIKFGAPISKPVGVFPRIEMEE 580

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BLAST of mRNA_Ecto-sp6_S_contig89.17958.1 vs. uniprot
Match: K9HT91_9PROT (Methionine--tRNA ligase n=1 Tax=Caenispirillum salinarum AK4 TaxID=1238182 RepID=K9HT91_9PROT)

HSP 1 Score: 673 bits (1737), Expect = 3.880e-233
Identity = 342/539 (63.45%), Postives = 395/539 (73.28%), Query Frame = 1

Query:  223 PYYVTTPIYYVNDKPHIGHAYTTLACDVIARFMRLDGREVMFLTGTDEHGQKVQASALKADKSPQQFCDEVSQEFRDLLKTMNFSNDRFIRTTDTSHKVAASALWNRLQERGQISLGVYAGWYSVRDEAFYGEAELVDGK-----APSGAEVEWVEKEPSYFFKLSEWQQPLLDFYAENPQFIAPESRRNEAVSFVSGGLRDLSISRTSFSWGVPVPGDDEHVMYVWVDALANYISALGFPEMGEAGEFSKFWPADLHVIGKDILRFHSVYWPALLLAAGLEPPKRLFVHGWWTKDGQKISKSTGNVIDPLDLVARYGVDATRYFLMSEVPFGNDGDFSETAFQNRVNSNLANEVGNLAMRTLSMAVKNCGGQVPRPAAAAGAGDAGEGGDKALGREDFDLTPEDEELLKSAGECLGVVRPLVGETQQLHKALEAILLVSRDANKYVDFQAPWKLKKTDPDRMKTVLWVLLETIRHVGILYQPFVPEAAGKLLDQLGVPEGDARLFAALDQEGGARFSLQPGVPLDKPVPVFPRIEVPE 1824
            PYY+TTPIYYVNDKPHIGHAYTTLACDV+ARF RLDG +V FLTGTDEHGQKV+ SA      PQ F D+VSQ FRDL   MNFSND FIRTT+  HK A  ALW RL E+  I L  Y GWY+VRDEAFY E ELVDG      AP+GA VEWVE EPSYFF+LS W   L+ FY +NP FIAPESRRNE +SFV GGL+DLSISRT+F WGVPVPGDD H+MYVW+DAL NYI+A+G+PE  E GEF KFWPADLH++GKDILRFH+V+WPA L+AAG+ PPKR+F HGWWT +G+KISKS GNVIDPL+L+  YG+D  RYFLM EVPFGNDGDFS  A   R+N  LAN++GNL+ R LSM  KNC G+VP   A                      TPED ELL +A   LG VRPL+ + Q  H+ALE I +V R AN YVD QAPW L+K+DP RM TVL+VL+E +R+V IL QP VPE+A K+LDQL +P+ DAR FAAL  EGGA   L  G P+ KP  VFPR   PE
Sbjct:    7 PYYITTPIYYVNDKPHIGHAYTTLACDVLARFKRLDGFDVKFLTGTDEHGQKVEKSAAAKGIDPQTFTDQVSQNFRDLATAMNFSNDDFIRTTEDRHKAACQALWKRLVEKDMIYLDAYKGWYAVRDEAFYAEDELVDGPDGQKMAPTGAPVEWVE-EPSYFFRLSAWGDKLMQFYQDNPDFIAPESRRNEVMSFVRGGLQDLSISRTTFKWGVPVPGDDAHIMYVWLDALTNYITAVGWPE--EGGEFDKFWPADLHMVGKDILRFHAVFWPAFLMAAGITPPKRVFAHGWWTNEGKKISKSVGNVIDPLELIETYGLDQVRYFLMREVPFGNDGDFSHRAMVGRMNGELANDLGNLSQRVLSMTAKNCKGEVPEVGA---------------------FTPEDRELLDAAYGLLGKVRPLM-DRQAFHEALETIWVVVRAANAYVDRQAPWVLRKSDPARMATVLYVLMEAVRNVAILMQPVVPESAAKMLDQLSIPD-DARTFAALG-EGGA---LTAGTPIPKPQGVFPRYVEPE 515

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BLAST of mRNA_Ecto-sp6_S_contig89.17958.1 vs. uniprot
Match: A0A1G6X898_9PROT (Methionine--tRNA ligase n=1 Tax=Rhodospira trueperi TaxID=69960 RepID=A0A1G6X898_9PROT)

HSP 1 Score: 673 bits (1736), Expect = 4.750e-233
Identity = 340/540 (62.96%), Postives = 393/540 (72.78%), Query Frame = 1

Query:  220 PPYYVTTPIYYVNDKPHIGHAYTTLACDVIARFMRLDGREVMFLTGTDEHGQKVQASALKADKSPQQFCDEVSQEFRDLLKTMNFSNDRFIRTTDTSHKVAASALWNRLQERGQISLGVYAGWYSVRDEAFYGEAELVDG-----KAPSGAEVEWVEKEPSYFFKLSEWQQPLLDFYAENPQFIAPESRRNEAVSFVSGGLRDLSISRTSFSWGVPVPGDDEHVMYVWVDALANYISALGFPEMGEAGEFSKFWPADLHVIGKDILRFHSVYWPALLLAAGLEPPKRLFVHGWWTKDGQKISKSTGNVIDPLDLVARYGVDATRYFLMSEVPFGNDGDFSETAFQNRVNSNLANEVGNLAMRTLSMAVKNCGGQVPRPAAAAGAGDAGEGGDKALGREDFDLTPEDEELLKSAGECLGVVRPLVGETQQLHKALEAILLVSRDANKYVDFQAPWKLKKTDPDRMKTVLWVLLETIRHVGILYQPFVPEAAGKLLDQLGVPEGDARLFAALDQEGGARFSLQPGVPLDKPVPVFPRIEVPE 1824
            PP+Y+TTPIYYVND PHIGHAYTTLACDV+ARF RLDG +V FLTGTDEHGQKV+ SA      PQ F D VS+ F DL   +NFSND FIRTT+  H  A  ALW+ L +R +I LG YAGWY+VRDEAFYGE EL  G     +APSGAEVEWVE EPSYFF+LS+W +PLLD Y   P F+AP+SRRNE +SFV GGL DLS+SRT+FSWG+PVPGDD+H+MYVW+DAL NYI+A+G+PE  E GE++  WPADLH++GKDILRFH+VYWPA L+AAGLEPPKR+F HGWWT +GQKISKS GNVIDP DLV  YG+D  RYFL+ EVPFGNDGDFS  A  NR+N  LAN++GNLA R LSM  KNCGG VP P                       LT ED  LL  A   L  VR  + + Q  H+ALEA+ +V R AN YVD QAPW L+KTDP RM TVLW L ETIRHV +L QP VP++A ++LDQLGVP  DAR F AL  EGGA   L PG PL KP  +FPR   PE
Sbjct:    5 PPFYITTPIYYVNDSPHIGHAYTTLACDVMARFKRLDGYDVKFLTGTDEHGQKVEKSAQAKGMDPQTFTDMVSRNFFDLAAALNFSNDDFIRTTEDRHTRACQALWDELIKRDEIYLGSYAGWYAVRDEAFYGEDELTTGPDGRKRAPSGAEVEWVE-EPSYFFRLSKWAEPLLDLYERRPDFVAPDSRRNEVMSFVKGGLNDLSVSRTTFSWGIPVPGDDDHIMYVWLDALTNYITAVGYPET-ETGEYATHWPADLHMVGKDILRFHAVYWPAFLMAAGLEPPKRVFAHGWWTNEGQKISKSLGNVIDPYDLVKSYGLDQVRYFLLREVPFGNDGDFSHRAMVNRMNGELANDLGNLAQRVLSMIAKNCGGAVPEPGP---------------------LTDEDTALLGQARGLLPAVRAAI-DRQAFHEALEALWVVVRAANAYVDRQAPWALRKTDPARMATVLWALAETIRHVAVLIQPVVPDSAARMLDQLGVPS-DARDFTALG-EGGA---LVPGAPLPKPQGIFPRYVEPE 515

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BLAST of mRNA_Ecto-sp6_S_contig89.17958.1 vs. uniprot
Match: B7G4V2_PHATC (Methionine--tRNA ligase n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G4V2_PHATC)

HSP 1 Score: 673 bits (1736), Expect = 3.540e-232
Identity = 329/535 (61.50%), Postives = 400/535 (74.77%), Query Frame = 1

Query:  223 PYYVTTPIYYVNDKPHIGHAYTTLACDVIARFMRLDGREVMFLTGTDEHGQKVQASALKADKSPQQFCDEVSQEFRDLLKTMNFSNDRFIRTTDTSHKVAASALWNRLQERGQISLGVYAGWYSVRDEAFYGEAELVDGKAPSGAEVEWVEKEPSYFFKLSEWQQPLLDFYAENPQFIAPESRRNEAVSFVSGGLRDLSISRTSFSWGVPVPGDDEHVMYVWVDALANYISALGFPEMGEAGEFSKFWPADLHVIGKDILRFHSVYWPALLLAAGLEPPKRLFVHGWWTKDGQKISKSTGNVIDPLDLVARYGVDATRYFLMSEVPFGNDGDFSETAFQNRVNSNLANEVGNLAMRTLSMAVKNCGGQVPRPAAAAGAGDAGEGGDKALGREDFDLTPEDEELLKSAGECLGVVRPLVGETQQLHKALEAILLVSRDANKYVDFQAPWKLKKTDPDRMKTVLWVLLETIRHVGILYQPFVPEAAGKLLDQLGVPEGDARLFAALDQEGGARFSLQPGVPLDKPVPVFPRIEVPEE 1827
            P+ +TTPIYYVNDKPHIGHAYT+ ACDVIARFMRL GR+V FL+GTDEHG+KV+ SA K +  PQ F D+VS  FR+LL+ MN SND+FIRTT   HK +    WN + E+G I +G Y+GWYSVRDE FY E+EL+DGKAP+GAEV WV KE SYFFKLS++++ LLD Y  NP FIAPESR+NE VSFV GGLRDLSISRTSF WGVPVP D++HVMYVWVDAL NYISALG+P+MGE  +FSKFWPA +H++GKDILRFH+VYWPA+L+AA L  PKRLF HGWWTKDGQKISKS GNVIDP++LV +YGVD TR+FLMSEV FGNDGDFS+ A   + N+NLANE+GNL  RTLS+  KNC   VP P  A                     TPEDE LL+SA      V   + + Q + K + A++ +  +ANKY+D  APW LKKTDP+RM TVL+VLLE +R+  ILYQP +PE+AGK+LDQL VP  + R F  L +E    +S++ G  + KPV +FPRIE+P +
Sbjct:   61 PFQITTPIYYVNDKPHIGHAYTSTACDVIARFMRLSGRDVFFLSGTDEHGEKVEQSAEKQNMDPQGFVDQVSVNFRELLELMNISNDKFIRTTSEDHKKSVQHFWNVMVEKGYIYMGTYSGWYSVRDECFYTESELIDGKAPTGAEVSWVAKEESYFFKLSQFEEKLLDLYERNPHFIAPESRKNEVVSFVKGGLRDLSISRTSFKWGVPVPDDEDHVMYVWVDALTNYISALGYPDMGEGSDFSKFWPASIHIVGKDILRFHAVYWPAMLMAAELPLPKRLFAHGWWTKDGQKISKSIGNVIDPVELVNKYGVDQTRFFLMSEVNFGNDGDFSDRAMIQKCNTNLANELGNLCQRTLSLVFKNCEKAVPNPVGA--------------------YTPEDEALLESARNLRNKVATEISQ-QSILKYVHAMVEMIWEANKYIDEMAPWALKKTDPERMATVLYVLLEVLRYSAILYQPLIPESAGKILDQLTVPANE-RTFLHLSEE----YSIKAGAAISKPVGIFPRIEMPAD 569

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BLAST of mRNA_Ecto-sp6_S_contig89.17958.1 vs. uniprot
Match: W7TRH3_9STRA (Methionine--tRNA ligase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TRH3_9STRA)

HSP 1 Score: 674 bits (1739), Expect = 7.030e-232
Identity = 337/535 (62.99%), Postives = 388/535 (72.52%), Query Frame = 1

Query:  226 YYVTTPIYYVNDKPHIGHAYTTLACDVIARFMRLDGREVMFLTGTDEHGQKVQASALKADKSPQQFCDEVSQEFRDLLKTMNFSNDRFIRTTDTSHKVAASALWNRLQERGQISLGVYAGWYSVRDEAFYGEAELVDGKAPSGAEVEWVEKEPSYFFKLSEWQQPLLDFYAENPQFIAPESRRNEAVSFVSGGLRDLSISRTSFSWGVPVPGDDEHVMYVWVDALANYISALGFPEMGEAGE--FSKFWPADLHVIGKDILRFHSVYWPALLLAAGLEPPKRLFVHGWWTKDGQKISKSTGNVIDPLDLVARYGVDATRYFLMSEVPFGNDGDFSETAFQNRVNSNLANEVGNLAMRTLSMAVKNCGGQVPRPAAAAGAGDAGEGGDKALGREDFDLTPEDEELLKSAGECLGVVRPLVGETQQLHKALEAILLVSRDANKYVDFQAPWKLKKTDPDRMKTVLWVLLETIRHVGILYQPFVPEAAGKLLDQLGVPEGDARLFAALDQEGGARFSLQPGVPLDKPVPVFPRIEVPE 1824
            YYVTTPIYYVNDKPHIGHAYTTLACDVIARFMRLDGR+V FLTGTDEHGQKV+ SA KA KSPQ F DEVSQ FR L K M F+ND+FIRTT   HK A  ALW +L+  G I LG Y GWYSVRDEA+Y E+ELVDGKAP+GAEV WV KEPSYFFKLS WQ+PLL+FYA +P FIAPESRRNE +SFV GGL+DLSISRT+F WGVPVP DD+HVMYVW+DAL NYISALG+PE   +    + +FWPADLHV+GKDILRFH+VYWPA L+AAGL PP+R+F HGWWTKD QKISKS GNVIDP+ LV ++G+D TRYFLMSEVPFGNDGDFS  AF  RVN+ LANE+GNL  R+L+   KNC GQVP P +A                    LT  D  +L+SA   L                      V  + N+Y D QAPW L+KTD DRM TVL+V +E +R V +LYQP +P +A KLLD L VP  + R FA +    GA  +L PG PL KP  VFPR+E P+
Sbjct:   93 YYVTTPIYYVNDKPHIGHAYTTLACDVIARFMRLDGRDVFFLTGTDEHGQKVEQSAAKAGKSPQTFVDEVSQNFRSLAKIMEFTNDKFIRTTQADHKAAVQALWKQLEAAGHIYLGAYEGWYSVRDEAYYTESELVDGKAPTGAEVVWVVKEPSYFFKLSAWQEPLLEFYAAHPNFIAPESRRNEVISFVKGGLKDLSISRTTFKWGVPVPEDDDHVMYVWMDALTNYISALGYPEAKGSSPTPYQRFWPADLHVVGKDILRFHAVYWPAFLMAAGLAPPRRIFAHGWWTKDRQKISKSLGNVIDPVRLVEQFGLDPTRYFLMSEVPFGNDGDFSNDAFVRRVNNQLANELGNLFQRSLAFIAKNCEGQVPEPTSA--------------------LTEADVAMLRSARGLLXXXXXXXXXXXXXXXXXXXXXXVVNEGNRYFDEQAPWTLRKTDKDRMATVLYVTVEALRSVALLYQPLIPASASKLLDLLAVPS-ERRTFADV----GADAALTPGTPLPKPEGVFPRVEDPD 602

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BLAST of mRNA_Ecto-sp6_S_contig89.17958.1 vs. uniprot
Match: A0A286GFJ2_9PROT (Methionine--tRNA ligase n=1 Tax=Caenispirillum bisanense TaxID=414052 RepID=A0A286GFJ2_9PROT)

HSP 1 Score: 669 bits (1726), Expect = 1.660e-231
Identity = 343/534 (64.23%), Postives = 396/534 (74.16%), Query Frame = 1

Query:  223 PYYVTTPIYYVNDKPHIGHAYTTLACDVIARFMRLDGREVMFLTGTDEHGQKVQASALKADKSPQQFCDEVSQEFRDLLKTMNFSNDRFIRTTDTSHKVAASALWNRLQERGQISLGVYAGWYSVRDEAFYGEAELV---DGK--APSGAEVEWVEKEPSYFFKLSEWQQPLLDFYAENPQFIAPESRRNEAVSFVSGGLRDLSISRTSFSWGVPVPGDDEHVMYVWVDALANYISALGFPEMGEAGEFSKFWPADLHVIGKDILRFHSVYWPALLLAAGLEPPKRLFVHGWWTKDGQKISKSTGNVIDPLDLVARYGVDATRYFLMSEVPFGNDGDFSETAFQNRVNSNLANEVGNLAMRTLSMAVKNCGGQVPRPAAAAGAGDAGEGGDKALGREDFDLTPEDEELLKSAGECLGVVRPLVGETQQLHKALEAILLVSRDANKYVDFQAPWKLKKTDPDRMKTVLWVLLETIRHVGILYQPFVPEAAGKLLDQLGVPEGDARLFAALDQEGGARFSLQPGVPLDKPVPVFPR 1809
            P+Y+TTPIYYVNDKPHIGHAYTTLACDV+ARF RLDG +V FLTGTDEHGQKV+ SA     +P+ F DEVSQ FRDL   MNFSND FIRTT+  H  A  ALWNRL E+G+I L  Y GWY+VRDEAFY E ELV   DG   AP+GA VEWVE EPSYFFKLS W   LL FY +NP FIAP+SRRNE +SFV  GL+DLS+SRT+F WGVPVPGDD+H+MYVW+DAL NYI+A+G+P+ G  GE++KFWPADLH++GKDILRFH+V+WPA L+AA L PPKR+F HGWWT +GQKISKS GNVIDPL L+  YG D  RYFL+ EVPFGNDGDFS  A  NR+N  LAN++GNLA R LSM  KNCG QVP                 A G    +LT +D ELL +A   +G +RPL+ + Q  H+ALEAI +V R AN YVD QAPW L+KTDPDRM TVLWVL+ET+R V IL QP  PE+A K+LDQL VP  DAR F AL  EGGA   L PG  L KP  VFPR
Sbjct:    6 PFYITTPIYYVNDKPHIGHAYTTLACDVLARFKRLDGFDVKFLTGTDEHGQKVEKSAAAKGIAPKAFTDEVSQNFRDLAAAMNFSNDDFIRTTEERHLAACQALWNRLIEKGEIYLDAYKGWYAVRDEAFYAEDELVTQPDGTKLAPTGAPVEWVE-EPSYFFKLSAWGDRLLKFYEDNPGFIAPDSRRNEVISFVKSGLQDLSVSRTTFKWGVPVPGDDDHIMYVWLDALTNYITAVGYPDQG--GEYAKFWPADLHMVGKDILRFHAVFWPAFLMAAELAPPKRVFAHGWWTNEGQKISKSVGNVIDPLALIESYGRDQVRYFLLREVPFGNDGDFSHRAMVNRMNGELANDLGNLAQRVLSMVAKNCGAQVP-----------------ARG----ELTADDRELLDAAWGLIGRLRPLM-DRQAFHEALEAIWVVVRAANAYVDRQAPWALRKTDPDRMATVLWVLMETVRQVAILMQPVTPESAAKMLDQLAVP-ADARAFTALG-EGGA---LVPGTDLPKPQGVFPR 509

[Close]

BLAST of mRNA_Ecto-sp6_S_contig89.17958.1 vs. uniprot
Match: A0A7S1V6R0_9STRA (Methionine--tRNA ligase n=2 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1V6R0_9STRA)

HSP 1 Score: 671 bits (1730), Expect = 2.390e-231
Identity = 336/532 (63.16%), Postives = 393/532 (73.87%), Query Frame = 1

Query:  223 PYYVTTPIYYVNDKPHIGHAYTTLACDVIARFMRLDGREVMFLTGTDEHGQKVQASALKADKSPQQFCDEVSQEFRDLLKTMNFSNDRFIRTTDTSHKVAASALWNRLQERGQISLGVYAGWYSVRDEAFYGEAELVDGKAPSGAEVEWVEKEPSYFFKLSEWQQPLLDFYAENPQFIAPESRRNEAVSFVSGGLRDLSISRTSFSWGVPVPGDDEHVMYVWVDALANYISALGFPEMGEAGEFSKFWPADLHVIGKDILRFHSVYWPALLLAAGLEPPKRLFVHGWWTKDGQKISKSTGNVIDPLDLVARYGVDATRYFLMSEVPFGNDGDFSETAFQNRVNSNLANEVGNLAMRTLSMAVKNCGGQVPRPAAAAGAGDAGEGGDKALGREDFDLTPEDEELLKSAGECLGVVRPLVGETQQLHKALEAILLVSRDANKYVDFQAPWKLKKTDPDRMKTVLWVLLETIRHVGILYQPFVPEAAGKLLDQLGVPEGDARLFAALDQEGGARFSLQPGVPLDKPVPVFPRIEV 1818
            P+ +TTPIYYVNDKPHIGHAYT+ ACDVIARFMRL GREV FL+GTDEHGQKV+ SA    + PQ F DEVS  FRDLL+ MN SND FIRTT   HK A   LWN L E+  I LG Y GWYSVRDE FY E+ELVDGKAP+GAEVEWV KE SYFFKLS +Q  LL+++ ENP FIAPESRRNE +SFV GGLRDLS+SRTSF WGVPVPGDDEHVMYVW+DAL NY+SALG+P    +  F KFWPA +HV+GKDILRFH+VYWPA+L+AA L  PKRLF HGWWTKDG+KISKS GNVIDP++LV  YGVD TR+FLMSEV FG+DGDFS  +F  RVNSNLANE+GNL  RTLSM  KNC                    +KA+  E  +LTPED  LL SA          + + Q +H+ ++ I+ V  D NKY+D QAPW LKKTD  RM TVL+V++E +RHV ILYQP +PE+A ++LDQL VPE D R FA L +E    + ++PG P+ KP  +FPRIEV
Sbjct:   63 PFEITTPIYYVNDKPHIGHAYTSTACDVIARFMRLSGREVFFLSGTDEHGQKVEQSAANKGQDPQAFVDEVSVNFRDLLELMNISNDAFIRTTSEEHKEAVKYLWNLLVEKEYIYLGTYEGWYSVRDECFYNESELVDGKAPTGAEVEWVAKEASYFFKLSAFQDKLLEYFEENPDFIAPESRRNEVISFVKGGLRDLSVSRTSFQWGVPVPGDDEHVMYVWIDALTNYMSALGYPS---SDNFEKFWPAAVHVVGKDILRFHAVYWPAMLMAADLPLPKRLFAHGWWTKDGEKISKSLGNVIDPVELVNEYGVDQTRFFLMSEVGFGSDGDFSNDSFIRRVNSNLANELGNLCQRTLSMVFKNC--------------------NKAVPEEIGELTPEDTALLNSARGLRERGGSFIAK-QSIHRYIDTIVEVVSDTNKYIDEQAPWTLKKTDTARMATVLYVIMEVLRHVAILYQPVIPESANRILDQLQVPE-DQRTFAHLTEE----YKIKPGTPISKPQGIFPRIEV 565

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BLAST of mRNA_Ecto-sp6_S_contig89.17958.1 vs. uniprot
Match: UPI00115ED8F3 (methionine--tRNA ligase n=1 Tax=Telmatospirillum sp. J64-1 TaxID=2502183 RepID=UPI00115ED8F3)

HSP 1 Score: 668 bits (1723), Expect = 4.080e-231
Identity = 340/543 (62.62%), Postives = 395/543 (72.74%), Query Frame = 1

Query:  223 PYYVTTPIYYVNDKPHIGHAYTTLACDVIARFMRLDGREVMFLTGTDEHGQKVQASALKADKSPQQFCDEVSQEFRDLLKTMNFSNDRFIRTTDTSHKVAASALWNRLQERGQISLGVYAGWYSVRDEAFYGEAELVDGK-----APSGAEVEWVEKEPSYFFKLSEWQQPLLDFYAENPQFIAPESRRNEAVSFVSGGLRDLSISRTSFSWGVPVPGDDEHVMYVWVDALANYISALGFPEMGEAGEFSKFWPADLHVIGKDILRFHSVYWPALLLAAGLEPPKRLFVHGWWTKDGQKISKSTGNVIDPLDLVARYGVDATRYFLMSEVPFGNDGDFSETAFQNRVNSNLANEVGNLAMRTLSMAVKNCGGQVPRPAAAAGAGDAGEGGDKALGREDFDLTPEDEELLKSAGECLGVVRPLVGETQQLHKALEAILLVSRDANKYVDFQAPWKLKKTDPDRMKTVLWVLLETIRHVGILYQPFVPEAAGKLLDQLGVPEGDARLFAALDQEGGARFSLQPGVPLDKPVPVFPRIEVPEEAVA 1836
            P+Y+TTPIYYVND PHIGHAYTTLACDV+ARF RLDG +V FLTGTDEHGQKV+ SA     +PQ F D VSQ FRDL   MNFSND FIRTT+  HK A  ALW +L ++G+I LG YAGWYSVRDEAFYG  EL DG      AP+GA VEWVE EPSYFF+LS WQ+ LLDFY +NP FIAP SRRNE +SFV GGL DLS+SRTSF WGVPVPGDD+H+MYVW+DAL NYI+A+G+PE G  GE++++WPADLH++GKDILRFH+VYWPA L+AAGLEPPKR+F HGWWT +GQKISKS GNVIDPL L+ RYG+D  RYFL+ EVPFGNDGDFS  A  NR+N  LAN++GNLA R LSM  KNC G+VP P A                     L+ +DE+LL  AG  L  VR L  + Q  H ALE I +V R AN YVD QAPW L+KTDPDRMKTVL+VL ETIR + +L  P VP++A ++LDQL V  G+ R FAA         +L  G  L KP  VFPR    EE VA
Sbjct:    6 PFYITTPIYYVNDVPHIGHAYTTLACDVLARFKRLDGYDVKFLTGTDEHGQKVEKSAAAKGIAPQAFTDTVSQNFRDLAVRMNFSNDDFIRTTEQRHKQACQALWKQLIDKGEIYLGAYAGWYSVRDEAFYGADELKDGPDGQKIAPTGAPVEWVE-EPSYFFRLSAWQERLLDFYEKNPDFIAPNSRRNEVISFVKGGLTDLSVSRTSFKWGVPVPGDDQHIMYVWLDALTNYITAVGYPETG--GEYARYWPADLHMVGKDILRFHAVYWPAFLMAAGLEPPKRVFAHGWWTNEGQKISKSLGNVIDPLQLIERYGLDQVRYFLLREVPFGNDGDFSHRAMVNRMNGELANDLGNLAQRVLSMIAKNCEGKVPEPGA---------------------LSGDDEDLLSEAGALLERVRDLF-DRQLFHDALETIWVVVRAANAYVDRQAPWALRKTDPDRMKTVLYVLAETIRRISLLMLPVVPDSASRMLDQLAVG-GEERTFAAFGT------ALVAGTDLPKPQGVFPRFVDAEEDVA 516

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp6_S_contig89.17958.1 vs. uniprot

BLAST of mRNA_Ecto-sp6_S_contig89.17958.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KVJ9_9PHAE	0.000e+0	93.31	Methionine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A836CKB9_9STRA	1.090e-238	63.74	Methionine--tRNA ligase n=1 Tax=Tribonema minus Ta...	[more]
A0A7S2LM79_9STRA	1.560e-233	62.55	Methionine--tRNA ligase n=1 Tax=Leptocylindrus dan...	[more]
K9HT91_9PROT	3.880e-233	63.45	Methionine--tRNA ligase n=1 Tax=Caenispirillum sal...	[more]
A0A1G6X898_9PROT	4.750e-233	62.96	Methionine--tRNA ligase n=1 Tax=Rhodospira trueper...	[more]
B7G4V2_PHATC	3.540e-232	61.50	Methionine--tRNA ligase n=1 Tax=Phaeodactylum tric...	[more]
W7TRH3_9STRA	7.030e-232	62.99	Methionine--tRNA ligase n=2 Tax=Monodopsidaceae Ta...	[more]
A0A286GFJ2_9PROT	1.660e-231	64.23	Methionine--tRNA ligase n=1 Tax=Caenispirillum bis...	[more]
A0A7S1V6R0_9STRA	2.390e-231	63.16	Methionine--tRNA ligase n=2 Tax=Grammatophora ocea...	[more]
UPI00115ED8F3	4.080e-231	62.62	methionine--tRNA ligase n=1 Tax=Telmatospirillum s...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp6_S_contig89	contig	Ecto-sp6_S_contig89:471881..479948 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Ectocarpus species6 EcLAC_371 OGS1.0	2022-07-08

Properties


Property Name	Value
Taxonomic scope	Bacteria
Stop	1
Start	1
Seed ortholog score	672.5
Seed ortholog evalue	1.8e-190
Seed eggNOG ortholog	1238182.C882_3884
Preferred name	metG
Model size	2599
KEGG rclass	RC00055,RC00523
KEGG ko	ko:K01874
KEGG Reaction	R03659,R04773
KEGG Pathway	ko00450,ko00970,map00450,map00970
KEGG Module	M00359,M00360
Hectar predicted targeting category	signal peptide
GOs	GO:0003674,GO:0003824,GO:0004812,GO:0004825,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006431,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0040007,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576
Exons	11
EggNOG free text desc.	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
EggNOG OGs	1MUBY@1224,2JPGA@204441,2TQKA@28211,COG0143@1,COG0143@2
Ec32 ortholog description	Methionyl-tRNA synthetase
Ec32 ortholog	Ec-16_002540.1
EC	6.1.1.10
Cds size	1842
COG Functional cat.	J
Best tax level	Rhodospirillales
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp6_S_contig89.17958.1	prot_Ecto-sp6_S_contig89.17958.1	Ectocarpus species6 EcLAC_371	polypeptide	Ecto-sp6_S_contig89 472638..479948 -

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1682350511.2740052-UTR-Ecto-sp6_S_contig89:471880..472637	1682350511.2740052-UTR-Ecto-sp6_S_contig89:471880..472637	Ectocarpus species6 EcLAC_371	UTR	Ecto-sp6_S_contig89 471881..472637 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1682350511.2845263-CDS-Ecto-sp6_S_contig89:472637..472862	1682350511.2845263-CDS-Ecto-sp6_S_contig89:472637..472862	Ectocarpus species6 EcLAC_371	CDS	Ecto-sp6_S_contig89 472638..472862 -
1682350511.2921758-CDS-Ecto-sp6_S_contig89:473700..473796	1682350511.2921758-CDS-Ecto-sp6_S_contig89:473700..473796	Ectocarpus species6 EcLAC_371	CDS	Ecto-sp6_S_contig89 473701..473796 -
1682350511.2997773-CDS-Ecto-sp6_S_contig89:474236..474563	1682350511.2997773-CDS-Ecto-sp6_S_contig89:474236..474563	Ectocarpus species6 EcLAC_371	CDS	Ecto-sp6_S_contig89 474237..474563 -
1682350511.307324-CDS-Ecto-sp6_S_contig89:474874..475109	1682350511.307324-CDS-Ecto-sp6_S_contig89:474874..475109	Ectocarpus species6 EcLAC_371	CDS	Ecto-sp6_S_contig89 474875..475109 -
1682350511.3150256-CDS-Ecto-sp6_S_contig89:475394..475526	1682350511.3150256-CDS-Ecto-sp6_S_contig89:475394..475526	Ectocarpus species6 EcLAC_371	CDS	Ecto-sp6_S_contig89 475395..475526 -
1682350511.3228984-CDS-Ecto-sp6_S_contig89:475943..476118	1682350511.3228984-CDS-Ecto-sp6_S_contig89:475943..476118	Ectocarpus species6 EcLAC_371	CDS	Ecto-sp6_S_contig89 475944..476118 -
1682350511.3306265-CDS-Ecto-sp6_S_contig89:476622..476717	1682350511.3306265-CDS-Ecto-sp6_S_contig89:476622..476717	Ectocarpus species6 EcLAC_371	CDS	Ecto-sp6_S_contig89 476623..476717 -
1682350511.3409278-CDS-Ecto-sp6_S_contig89:476945..477053	1682350511.3409278-CDS-Ecto-sp6_S_contig89:476945..477053	Ectocarpus species6 EcLAC_371	CDS	Ecto-sp6_S_contig89 476946..477053 -
1682350511.3490095-CDS-Ecto-sp6_S_contig89:477617..477727	1682350511.3490095-CDS-Ecto-sp6_S_contig89:477617..477727	Ectocarpus species6 EcLAC_371	CDS	Ecto-sp6_S_contig89 477618..477727 -
1682350511.3650668-CDS-Ecto-sp6_S_contig89:478117..478345	1682350511.3650668-CDS-Ecto-sp6_S_contig89:478117..478345	Ectocarpus species6 EcLAC_371	CDS	Ecto-sp6_S_contig89 478118..478345 -
1682350511.3760107-CDS-Ecto-sp6_S_contig89:479837..479948	1682350511.3760107-CDS-Ecto-sp6_S_contig89:479837..479948	Ectocarpus species6 EcLAC_371	CDS	Ecto-sp6_S_contig89 479838..479948 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at Ecto-sp6_S_contig89:471881..479948-
coding sequence from alignment at Ecto-sp6_S_contig89:471881..479948-

protein sequence of mRNA_Ecto-sp6_S_contig89.17958.1

>prot_Ecto-sp6_S_contig89.17958.1 ID=prot_Ecto-sp6_S_contig89.17958.1|Name=mRNA_Ecto-sp6_S_contig89.17958.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=614bp
MGYRQLAIAMLSLAHRSFSFVPRALTTVSSRGRARSQAWSRAGTAAAAAT
AVRTRMSSASSSASSTGHDTKEMPPYYVTTPIYYVNDKPHIGHAYTTLAC
DVIARFMRLDGREVMFLTGTDEHGQKVQASALKADKSPQQFCDEVSQEFR
DLLKTMNFSNDRFIRTTDTSHKVAASALWNRLQERGQISLGVYAGWYSVR
DEAFYGEAELVDGKAPSGAEVEWVEKEPSYFFKLSEWQQPLLDFYAENPQ
FIAPESRRNEAVSFVSGGLRDLSISRTSFSWGVPVPGDDEHVMYVWVDAL
ANYISALGFPEMGEAGEFSKFWPADLHVIGKDILRFHSVYWPALLLAAGL
EPPKRLFVHGWWTKDGQKISKSTGNVIDPLDLVARYGVDATRYFLMSEVP
FGNDGDFSETAFQNRVNSNLANEVGNLAMRTLSMAVKNCGGQVPRPAAAA
GAGDAGEGGDKALGREDFDLTPEDEELLKSAGECLGVVRPLVGETQQLHK
ALEAILLVSRDANKYVDFQAPWKLKKTDPDRMKTVLWVLLETIRHVGILY
QPFVPEAAGKLLDQLGVPEGDARLFAALDQEGGARFSLQPGVPLDKPVPV
FPRIEVPEEAVAS*

mRNA from alignment at Ecto-sp6_S_contig89:471881..479948-

Legend: polypeptideCDSUTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_Ecto-sp6_S_contig89.17958.1 ID=mRNA_Ecto-sp6_S_contig89.17958.1|Name=mRNA_Ecto-sp6_S_contig89.17958.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=8068bp|location=Sequence derived from alignment at Ecto-sp6_S_contig89:471881..479948- (Ectocarpus species6 EcLAC_371)
ATGGGGTACCGACAGCTGGCGATTGCCATGCTCTCACTGGCGCACCGCTC
GTTTTCCTTCGTGCCAAGAGCACTGACCACGGTCAGCAGCAGAGGGAGAG
CACGTTCACAGGTGATGGGTATGTTGCAATTTTGCTGTCCGAACCCACCG
CTCGCTTCCCGAGGAGCCAACACCGATGATACCGATGATGATGTTCCCAG
ACGCCGGTGCTTTCTTTGGCCGACTAGGGCGCCACTCTTCCTACTGCTTC
AAGTGTCATTCCTGTGCCGAGGCGGTGTGTTGAACTGCTGTGGGTTCTCG
AGACAGAAATCCACCGTTGGGTGTGTGCTCATATTTGAGATTACGTCATT
GCTTCCCTCGACAGGGTGCTGAGTCGGACCGACGACCTTTGCTTTGTACT
ACAGCTGTTCCAGCAGCAGTTCCGTGTGTGCATGATCCTCACCTCGCGCA
GTAGGCAGCATCTGTTCTACTGCCCTCTTTCCTCCATTCCCTTGCAGCCA
ATGCGAGCAATGGATGCGCGAAAATAGTCTAAAACTTTTCCCAGCGTCAC
TTGTTGAAACTGCTGTGAAGGGAGACACTATTGATCGAATGTAAAAACAC
GAGATCGCTTGTGTAAACATTTAAACATGACAGCAGACTGGTACACTGGT
ACTGGTACTGGTTGTATTGTACAAATTGTACACAGCAGCAGTAACGTCGG
TGTGGGCTGTGTGGGTGGTTATTCAGATTACCGATGACTTCTTGTTGTTT
CCTCGAAAACGCTAATACACAAATGAAACGGAGTCAGTCTTACATGGCAG
AGACTTAGCCGATAGAACAAGCATTTGTGTGTCGGTGAACGTTTTCTCTA
CGCACCATGTCCCTCGCCGCACGAGCATCTGGCCCAAATGCCTTGGGGTC
ATCAGTATAGGTGCGTTGCTGTCGATGTACAGCAGTAGTCTACAGCAGAT
TACTCCCATGTGCGAGAACTCTCAGTTGTGTCGGGCACGACAGTCCATCG
CGGGGCAGGGAGGGGGGGGAGACATTTCCAACACGTCAAGAATTGCCGAA
ATGGTCTTCTGTCGCTCTTGTCACGGACGGAAATATTGCCGGATCGCGCA
AGAGGTACATATACATTCACTGCAAAGCCTCCAACACATCCCTTTCGACT
GTGGTCATGTCTCGAACGGGTAGTCTTTCCGTGTTTGTACATATCTATTT
TTCCTAATAGGCATACAGAAAATCGCGCTCGGCTTGCACGCAGGTAGACT
ACTTTTGGTGCAAGGCCGTTTTGTGCATCAAAAGCAAGGTCGCGTGCACA
GCACGGCGCGAGTTTGCGCGTGCTTATACACGGAGACCGCAGCTCGTGTC
CCCTGTCCCGCGATGGCGTTTGCATGGTGTGCGGGGAGTCTTCGAAATGC
ACGGGGCATTTTGATGTTAGCGAGGAGGCTGGCTCCCTGCTATCGGACAA
GTGCTGTATTACAGGGTCGACACGGAAGTTATCGGCGTACATCCCGCATG
CCGTTGCCAAGGTTGTTGCGATCATGACAGCAGTGCGGTGTTTGGCTGGT
ACGTACACGCACATGATCGTATGCTTGATCAACAAACACGCTTGGCGTTG
CAGGCATGGAGTCGGGCCGGCACGGCGGCAGCGGCGGCGACGGCCGTTAG
GACACGGATGTCGTCGGCATCGTCGTCAGCATCATCCACCGGACACGACA
CGAAGGAGATGCCGCCGTACTACGTGACAACCCCGATCTACTACGTGAAC
GACAAGCCGCACATCGGGCACGCCTACACCACGTTGGCGTGCGACGTGAT
CGCTCGCTTCATGAGGCTCGACGGGAGGGAGGTGATGTTCTCTTGTCGGT
TTCGTTACAATACAACATCCGTTATTAACTTGGGGGGGGGGGCGCAACGA
CTCCACATTGCTAGGAATTTTCCTGTTTAGCGTCGATTTTTCTCCGTTTC
TCAAGGAGTCTGTTGAGTCCCCCGAGACCGATACTTTGATTTATATTTTT
CCAACGGACAATCAAGTGCTCTGAAATGATGGTGAATCGATGGTCATTGT
TATTCACAGCTGGCCGGGAGGCGAAACACACCGACGAAAACGTTCCCAAG
ATCGCTTCTTTCCCAACGGCAGCACGTTGCTTCCAACGAAACGTTCGTTC
TGAGTCACCCATCCATGCTGCCCTTTTTCCGTTTTGATTTGTTGTCTTAA
CTGTTGGCCATTGACAAACAGGTCATGTTTCTGACGGGAACGGACGAGCA
CGGGCAGAAGGTGCAGGCCTCGGCGCTTAAGGCCGACAAGTCGCCGCAGC
AGTTCTGCGACGAGGTTTCGCAGGAGTTCAGGTAGGCGATGGCTTTTTTG
TTGTTGTTGAAAGTGACGGGTGGTGTTGGGGTCGGCAGCCCTGCGTTCGT
GATGGGGATGCTATTGTGGTGAGGTAGTGACAGCAACAATTTTTTGTAGC
AGTGGTGGTTGTGGTAGGTGATCGTTTTTACCTCCCATCGTGGATGGTGT
TGGAAGATCGTCTGGTGGCGATTCCCATCTCTTTTGATTCCGTGTGTCTT
TCTCGCTATATATATAAATATACTCTACCCGACAGCTGACGCGACAGATG
GCCAGAATAAGTGCGTGGTATTTTTACAGCCGTAGGAAATTTCTTGGCAC
TGTGGGGAAGAACTTACAAATCTATATTTGGAAATATAGTCTTATACCTG
TCTGTCTCTCTAACAATATATTTTATCCTCTCTATCTATCTATCCATCTT
TGAACACGATTACTTTGCGAGAATCGCTCTCCTAAAGATGGCGGCAACGG
CGGTGCCGTACCCAAACTCGCCGATCTCTTCCTCATTTCCTCCACCTCTC
CCAAACCTCTTCTGCCCCCCCGTCTCAACCGTACGTACAATACAGAGACT
TGTTGAAGACCATGAATTTCAGTAACGACCGCTTCATCAGGACGACGGAC
ACATCGCACAAGGTGGCCGCGTCTGCCCTGTGGAACAGGCTGCAGGAGAG
GGGGTGAGACGGCGATGTGGAACTGGGAAAGGGGGTGCACTAATGTAGGA
CGCACGCGGTTGTCGTTAGACCACTGACATCGCATACCTCATATTTGTAC
AACAATGCCAACAGCCAAAAATAACGACAACAACAACAACAACGTCCAAA
CAGCCGCAACAACAGGAAGGCGGGGGACCATTGGCTTTATTCCTTTGTCG
CCGCCGCCGCTGCCACGATTTTCGTGTCCAGGCAAATTTCGCTGGGGGTG
TACGCCGGGTGGTACAGCGTGAGGGACGAGGCCTTCTACGGGGAGGCGGA
GCTAGTCGACGGCAAGGCGCCTTCAGGTGAGCCACAAGAAAGTCACACAC
CCACACACAAACACACTCACACGCGGACAGGTGGAGGGAAACAAAGGTAC
AGCGACTTCGGTGTCCGAAGAAAAAATGGATCCCGGGGAGATCTCGATGG
CTAGAAAGTGTGTCTGTTTTTCTCTTTCTGTTTTTCCCAATCTCGAAGAC
TGAGGTCTTTTCATCGGTCAGCTGGTTAGCGCAGTCGATGCTTCTTGCAA
GGCACAGGCCACAGTTTCACATGCTGTCTGGCCCCGTGGAAGGTAAGCCT
TGTCTCGCCATATTTGTCCCGCTTATGGCTGGCATTTTTTTTCGGAGGTC
AGATTCGCGCGACGCACTCGCCGCCATGACCCCCCCGCCCCCCCTGTTTT
TTTCTGCTCTATTTTTTAGAGCAAGCATGGAACACTGGTGCTTATTTCAT
CCCAACATCGGTCGTTTTTCTGCGTCGTTTCCTATCCTTACTCGACTGAC
GTTCTTTTTTGGGGGGGGCGGAGTAAACAGGCGCTGAGGTGGAGTGGGTC
GAGAAAGAGCCGTCGTACTTCTTCAAGCTGAGCGAGTGGCAGCAGCCGCT
CCTGGACTTCTACGCGGAGAACCCGCAGTTCATTGCCCCGGAGTCGCGGA
GGAACGAAGCGGTGTCGTTCGTGTCGGGGGGGCTCAGAGACCTCTCCATC
TCCAGGTCCGTGGCGAGAAACCTGTCGGACGCGTTAATCTCGTTCGTTTT
TTGGTGTGTGTTTTGGCTTCTTTTTTTTTTTTTTTGGTACTTTAGGCATT
GCAAGAACAACACAGCAGTAAGTCAAGCTCTATTCTATGTACGGTGTTTT
TATTGGTTTTGTTTTTCGTGGTGGTGGCGGTGGGGTCGTAAATCTTGTTC
GCGTTGTTGTTGTGTATGTGTGGCGCTTTTTTTCTTCGTATGCATCACGA
AAGAACACAGCAAGTCAAAAACACTACCTGGTACTAATTACTACAATACA
CCTATTGCCTATAAGGGTTGCGAATTTCGTCTTTTTTTTTTTGTGGTAGT
GATGGTGGGAGTTGTTGGCATTAAGAAAAAAGCATCATATGAAGCATACC
ACCTTCGCATTCCCATCCACAGGACCTCCTTCTCCTGGGGGGTGCCGGTG
CCCGGCGACGACGAGCACGTCATGTACGTCTGGGTCGATGCCCTGGCCAA
CTACATCTCGGCCCTCGGTTTCCCGGAGATGGGCGAGGCGGGAGAGTTCA
GCAAGTGAGCCTGTTCAGTCGGTCGGCAACCAACCTCGTTTCGTTTCTCT
TTTTTTTTTTTTTTCTTACGAAGAAAACACAGTATGAATTCAGCTCTCGC
TTTTCGACGGATAAAATGTCCTGCATAAAAGTAGCCAAATACTGAAGTTT
TCTGAGTTTTTTTTTTCATGTGATGTTTGTTTGCTGTTTCTTCGGCAAAC
TTCTCTCCCCCCACACACTTTCGCTTGCCAATATCCCCACCCTCCTATCC
TCCAACAACCAAACAAACTAACCCTTTATCAAACGCCAGGTTCTGGCCTG
CGGACCTGCACGTCATCGGCAAGGACATCCTCCGGTTCCACTCGGTCTAC
TGGCCGGCCCTCCTCCTGGCGGCGGGGCTGGAGCCTCCCAAGAGGCTGTT
CGTCCACGGGTGGTGGACCAAGGACGGCCAGAAAATCTCCAAGAGCACGG
GGAACGTGATAGACCCGCTGGACCTGGTGGCCCGCTACGGGGTAGACGCT
ACGCGGTACTTCCTCATGAGCGAGGTGGGCGTGGCGTTTTCTTTGCCGCA
CGTGGTGGTGGCGGGTGGTGTTGTTGTTCAGTCCTCTCTGCTTCCGTTTT
TCCCTGTCACTTTGTATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
TCTCTCTCGCTGTCTCGCTTTCTGTCTCTCCCCCTCCGTCTATTGTCTGT
CTGTGTTCATGTATCTTCTTTTATGTGTAGATATGTCTTGTCTCTCGCTC
ACCCTCTCTCTCTCTTTGTATTGCCCCCCCTCTCTGCTCACGTACGTCCT
CTCTCGCCTCCCGACGGCGACACGCCCAACGAAAGGTACCCTTTGGAAAC
GACGGGGACTTCTCGGAAACCGCCTTCCAGAACCGCGTGAACTCCAACCT
AGCCAACGAAGTCGGAAACCTCGCCATGCGGACGCTGTCCATGGCGGTAA
AGAACTGCGGGGGCCAAGTGCCAAGACCGGCGGCAGCTGCCGGTGCGGGG
GACGCGGGCGAGGGAGGTGACAAGGCGCTGGGGAGAGAAGACTTCGACCT
CACGCCTGAGGACGAGGAACTTCTCAAGTCCGCGGGGGAGTGCCTTGGTG
TCGTCAGGCCACTGGTCGGGGAGACGCAGCAGCTGCACAAGGCCTTGGAG
GCTATCTTGCTGGTGAGGAATCGTGGGAGGGGAGGGGAGGGGGGGGGTGT
ACTCATAGTCGTGCATGCCGTAGTCGTTAGACCATTGACCTCGCATCCCT
ACAAAGCCGGGACGGAGCACGCCGGGTTCTCACCAGGCCAGGCTCTCGCA
TCGCCAAGCGCGAAGCGATGTGAGATTCGGCAAAGGGGGCGTTCTCGCAT
CGAGAGGGGTTGAATACTTGTGTCGTGTGTTTTGTTTTGTCTTTGCTGGT
GGGTTAGTGTTGCAAGAGGCTTTCATGCTGTGGGGCAATTTCTGTGCTTC
CCTCTCTCCTTCTCTTTCACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
TCTTTCTCTGTCTCACTCACTGCTACCCCCCCGCCGTCTACCATCTCTCG
CTCTCTTCATCACTACCCCCCCCCCATCCGCACCCTCATTTCTCCTCGGT
AGGTCTCTAGGGACGCCAATAAATACGTCGATTTCCAAGCACCGTGGAAG
CTCAAGAAGACCGACCCAGATAGAATGAAGACGGTCTTGTGGGTGCTGGT
GGGTCAAGCTGTTGTACGATTATGATTTATAAAAAGGATTGCATTCCCCG
CTTGGCGAAACGCCGAGACGCGGCATCATATTTTTGTACGGGGTTCACCT
CGATCGTGTGGCAGGCCTTGATCGATTACTATACCCCCCCCCAGACATAG
GACGGTAGACGACGAAGACGACAAGTTTAAATGTGATTGCGACTTCGAGT
GCGAAGACCGTGTTCATGTAGTCGCGGAATGTCCGTGGTACGAAGAGGAG
AGGGAAGTGTACATGACCGAGCTGGGAAAAATAGAAGGGAGGTACAGGGA
GATGTTTGAGGCATGGAATAGAGAGGAGAGGACGGTAGCGGTACTGGGGA
GTAGGAAGTGGTTTGAAAAGGCGGGAAGGGATATCGTTAGGATAGACAGA
CTCGGGAAGACATTTTTGAGCCACCTTTGGCAAAGTAGGAAGGAACGATT
GGCCATCGGTGATCGGTCCTGTGGGAACAATGCTCCGTCCTCTCGAGGAC
GCGTGGTCAATGGTCTAACCGCTAAGACATGCAAAACATAAGAGTACGCC
CCCCGCCATCATTGATACGCGTACCCCCCGTGTTGTAGACTAAGTACACG
GTGGTACTTGACCATGGGGTGCAACACATGTTCCTCATTGGCGAAGCGAA
ACGCCTCCGCGGTCCCGACCTTTTGGGGGTGCCGCATTCTGCCACTACAG
CATGATGACCCCCCCCTCCTCAGCGACGATGCGAGGGCCCTGTCCGATCC
GTGGACAAATCGATTTATCCATGAGACTGCTGAGTACCCCGCCCCCTCAT
GATGCACGCCACCCTCTCGCTCGTTTGATCCCGCAGCTGGAGACGATTAG
ACACGTAGGGATCCTGTATCAGCCGTTCGTACCCGAAGCGGCCGGGAAGC
TGTTGGACCAGCTAGGGGTGCCGGAGGGAGATGCGCGATTATTCGCGGCG
TTAGATCAGGAGGGGGGGGCGCGATTTTCGCTGCAGCCCGGGGTCCCCCT
GGACAAGCCCGTCCCCGTTTTCCCTAGGATCGAAGTGCCGGAGGAAGCGG
TTGCGTCTTAGCCCGGCGGCTTGGCTGTTTTTGAATCCTTGTAGAAAAAG
TCAAGGCTTTGGTGAAGCTGTCTGGCTGAACTTCGGTTGGGGTCGGACTT
TTGCGCTTTCTTGTTTGTGTGGAACGATTGTTGCTACTGCTGTGGCCGCA
GACTCATGTTTGTGGGGTGTCCCGGAACGTCGTGGAGCAGGCGTTTCTTT
CTTGGGGGTGTGGCGTCGACCTCTTCGAGCTAGCCTTGAGGTTTTGCAGA
AGACCGCAAGATTTTCTATAGAGCTGTTTGGGTAACTAGGCGGCGTGTTG
GTTGCATGATTGCTCGGGAAGAGGGCCAGGGGTCACTGCAGTGAGGATTG
TGAGAGAGAGAGAGAGAGTTGTGGTGATTTCCACTACACTTCTGTACCCG
TCAAATATCAATAAACAGTCTTCGGTGTAAGAGCACGAGCGACAAGCAAG
TACGCGACCGTTGTCAGCTTTGCGGCGAAAAAAACGCTCCACCTTTGACA
AAAAACGCCGCAGATTAGCTCTGCGACGACGGGTAGTCTACTGTCATCCG
GACATTGACCATGGAGCACGGTGCGTTTGGGGGCTATTTTCTATGTACAG
CGATGGTGTGTTATTGGACGTGGGGACGAGTCGTAGCTGGATAGATATCG
TTGCGCGCACCACCAAACAAAACGCGGTGCCTTTGGGTCATGTACAGCGG
CGACTAAGGACGTCTGGGACGAATTGTGTAGTGGCTGGATAGAGAATCGT
TGTGCGCGTATGCATATA

Coding sequence (CDS) from alignment at Ecto-sp6_S_contig89:471881..479948-

>mRNA_Ecto-sp6_S_contig89.17958.1 ID=mRNA_Ecto-sp6_S_contig89.17958.1|Name=mRNA_Ecto-sp6_S_contig89.17958.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=1842bp|location=Sequence derived from alignment at Ecto-sp6_S_contig89:471881..479948- (Ectocarpus species6 EcLAC_371)
ATGGGGTACCGACAGCTGGCGATTGCCATGCTCTCACTGGCGCACCGCTC
GTTTTCCTTCGTGCCAAGAGCACTGACCACGGTCAGCAGCAGAGGGAGAG
CACGTTCACAGGCATGGAGTCGGGCCGGCACGGCGGCAGCGGCGGCGACG
GCCGTTAGGACACGGATGTCGTCGGCATCGTCGTCAGCATCATCCACCGG
ACACGACACGAAGGAGATGCCGCCGTACTACGTGACAACCCCGATCTACT
ACGTGAACGACAAGCCGCACATCGGGCACGCCTACACCACGTTGGCGTGC
GACGTGATCGCTCGCTTCATGAGGCTCGACGGGAGGGAGGTCATGTTTCT
GACGGGAACGGACGAGCACGGGCAGAAGGTGCAGGCCTCGGCGCTTAAGG
CCGACAAGTCGCCGCAGCAGTTCTGCGACGAGGTTTCGCAGGAGTTCAGA
GACTTGTTGAAGACCATGAATTTCAGTAACGACCGCTTCATCAGGACGAC
GGACACATCGCACAAGGTGGCCGCGTCTGCCCTGTGGAACAGGCTGCAGG
AGAGGGGGCAAATTTCGCTGGGGGTGTACGCCGGGTGGTACAGCGTGAGG
GACGAGGCCTTCTACGGGGAGGCGGAGCTAGTCGACGGCAAGGCGCCTTC
AGGCGCTGAGGTGGAGTGGGTCGAGAAAGAGCCGTCGTACTTCTTCAAGC
TGAGCGAGTGGCAGCAGCCGCTCCTGGACTTCTACGCGGAGAACCCGCAG
TTCATTGCCCCGGAGTCGCGGAGGAACGAAGCGGTGTCGTTCGTGTCGGG
GGGGCTCAGAGACCTCTCCATCTCCAGGACCTCCTTCTCCTGGGGGGTGC
CGGTGCCCGGCGACGACGAGCACGTCATGTACGTCTGGGTCGATGCCCTG
GCCAACTACATCTCGGCCCTCGGTTTCCCGGAGATGGGCGAGGCGGGAGA
GTTCAGCAAGTTCTGGCCTGCGGACCTGCACGTCATCGGCAAGGACATCC
TCCGGTTCCACTCGGTCTACTGGCCGGCCCTCCTCCTGGCGGCGGGGCTG
GAGCCTCCCAAGAGGCTGTTCGTCCACGGGTGGTGGACCAAGGACGGCCA
GAAAATCTCCAAGAGCACGGGGAACGTGATAGACCCGCTGGACCTGGTGG
CCCGCTACGGGGTAGACGCTACGCGGTACTTCCTCATGAGCGAGGTACCC
TTTGGAAACGACGGGGACTTCTCGGAAACCGCCTTCCAGAACCGCGTGAA
CTCCAACCTAGCCAACGAAGTCGGAAACCTCGCCATGCGGACGCTGTCCA
TGGCGGTAAAGAACTGCGGGGGCCAAGTGCCAAGACCGGCGGCAGCTGCC
GGTGCGGGGGACGCGGGCGAGGGAGGTGACAAGGCGCTGGGGAGAGAAGA
CTTCGACCTCACGCCTGAGGACGAGGAACTTCTCAAGTCCGCGGGGGAGT
GCCTTGGTGTCGTCAGGCCACTGGTCGGGGAGACGCAGCAGCTGCACAAG
GCCTTGGAGGCTATCTTGCTGGTCTCTAGGGACGCCAATAAATACGTCGA
TTTCCAAGCACCGTGGAAGCTCAAGAAGACCGACCCAGATAGAATGAAGA
CGGTCTTGTGGGTGCTGCTGGAGACGATTAGACACGTAGGGATCCTGTAT
CAGCCGTTCGTACCCGAAGCGGCCGGGAAGCTGTTGGACCAGCTAGGGGT
GCCGGAGGGAGATGCGCGATTATTCGCGGCGTTAGATCAGGAGGGGGGGG
CGCGATTTTCGCTGCAGCCCGGGGTCCCCCTGGACAAGCCCGTCCCCGTT
TTCCCTAGGATCGAAGTGCCGGAGGAAGCGGTTGCGTCTTAG