mRNA_Ecto-sp6_S_contig89.17956.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig89.17956.1
Unique NamemRNA_Ecto-sp6_S_contig89.17956.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
BLAST of mRNA_Ecto-sp6_S_contig89.17956.1 vs. uniprot
Match: D8LK96_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK96_ECTSI)

HSP 1 Score: 604 bits (1557), Expect = 4.450e-217
Identity = 318/331 (96.07%), Postives = 321/331 (96.98%), Query Frame = 1
Query:    1 QDGEPRAALTAVLTSKALEVARNGFAGATAGAVSRVLTAPLDVAKIRFQLDHGATRRYDSTLWAAMRSIYGEEGLVTLWRGNLPAMFLWSAYTAVQFSAYEQLRATDFLRSRQHDSSSGSGGGRHRGSICPSSSPPHERRGAGRVGEVGGGWRTGGREGENQYQALRRQQDGRGRGLPPALANFAYGAMAAFTATLVTYPLDITRTALAFQGVPKRYNSMSEFLRRTARESGVRGLFRGATPTLAMITPQMGVSFAVWEALKGGAPPPAFSGSGSGASPAVTLSWQLGAGMVAGMVGKLVVFPLDTVKKRVQTAVRTRIREEEEEVGRGLF 993
            QDGEP AALTAVLTSKALEVARNGFAGATAGAVSRVLTAPLDVAKIRFQLDHGATRRYDSTLWAAMRSIYGEEGLVTLWRGNLPAMFLWSAYTAVQFSAYEQLRATDFLRSRQHDSS   GG RHRGSICPSSSPPHERRGAGRVG+VGGGWRTGGREGE+  QA RRQQDGRGRGLPPALANFAYGAMAAFTAT+VTYPLDITRTALAFQGVPKRYNSMSEFLRRTARESGVRGLFRGATPTLAMITPQMGVSFAVWEALKGGAPPPAFSGSGSGASPA TLSWQLGAGMVAGMVGKLVVFPLDTVKKRVQTAVRTRIRE EEEVGRGLF
Sbjct:    6 QDGEPCAALTAVLTSKALEVARNGFAGATAGAVSRVLTAPLDVAKIRFQLDHGATRRYDSTLWAAMRSIYGEEGLVTLWRGNLPAMFLWSAYTAVQFSAYEQLRATDFLRSRQHDSSVSGGGVRHRGSICPSSSPPHERRGAGRVGKVGGGWRTGGREGESPCQARRRQQDGRGRGLPPALANFAYGAMAAFTATVVTYPLDITRTALAFQGVPKRYNSMSEFLRRTARESGVRGLFRGATPTLAMITPQMGVSFAVWEALKGGAPPPAFSGSGSGASPAATLSWQLGAGMVAGMVGKLVVFPLDTVKKRVQTAVRTRIREVEEEVGRGLF 336          
BLAST of mRNA_Ecto-sp6_S_contig89.17956.1 vs. uniprot
Match: A0A6H5KH83_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH83_9PHAE)

HSP 1 Score: 554 bits (1428), Expect = 1.470e-196
Identity = 299/315 (94.92%), Postives = 303/315 (96.19%), Query Frame = 1
Query:    1 QDGEPRAALTAVLTSKALEVARNGFAGATAGAVSRVLTAPLDVAKIRFQLDHGATRRYDSTLWAAMRSIYGEEGLVTLWRGNLPAMFLWSAYTAVQFSAYEQLRATDFLRSRQHDSSSGSGGGRHRGSICPSSSPPHERRGAGRVGEVGGGWRTGGREGENQYQALRRQQDGRGRGLPPALANFAYGAMAAFTATLVTYPLDITRTALAFQGVPKRYNSMSEFLRRTARESGVRGLFRGATPTLAMITPQMGVSFAVWEALKGGAPPPAFSGSGSGASPAVTLSWQLGAGMVAGMVGKLVVFPLDTVKKRVQTAV 945
            QDGEPRAALTAVLTSKALEVAR+GFAGATAGAVSRVLTAPLDVAKIRFQLDHGATRRYDSTLWAAMRSIYGEEGLVTLWRGNLPAMFLW+AYTAVQFSAYEQLRATDFL SRQH+S SG GG R+RGS CPSSS PHERRGAGRVGEVGG WRTGGREGENQYQALRRQQDGRGRGLPPALANF YGAMAAFTATLVTYPLDITRTALAFQGVPKRYNSMSEFLRRTARESGVRGLFRGATPTLAMITPQMGVSFAVWEAL GGAP  AFSGSGSGASPA TLSWQLGAGMVAGMVGKLVVFPLDTVKKRVQTAV
Sbjct:   24 QDGEPRAALTAVLTSKALEVARSGFAGATAGAVSRVLTAPLDVAKIRFQLDHGATRRYDSTLWAAMRSIYGEEGLVTLWRGNLPAMFLWAAYTAVQFSAYEQLRATDFLLSRQHNSVSG-GGVRYRGSSCPSSSSPHERRGAGRVGEVGG-WRTGGREGENQYQALRRQQDGRGRGLPPALANFVYGAMAAFTATLVTYPLDITRTALAFQGVPKRYNSMSEFLRRTARESGVRGLFRGATPTLAMITPQMGVSFAVWEALTGGAPR-AFSGSGSGASPAATLSWQLGAGMVAGMVGKLVVFPLDTVKKRVQTAV 335          
BLAST of mRNA_Ecto-sp6_S_contig89.17956.1 vs. uniprot
Match: A0A836C8L1_9STRA (Mitochondrial substrate/solute carrier n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8L1_9STRA)

HSP 1 Score: 163 bits (412), Expect = 2.920e-44
Identity = 118/301 (39.20%), Postives = 145/301 (48.17%), Query Frame = 1
Query:   67 NGFAGATAGAVSRVLTAPLDVAKIRFQLDHG-ATRRYDSTLWAAMRSIYGEEGLVTLWRGNLPAMFLWSAYTAVQFSAYEQLR-------ATDFLRSRQHDSSSGSGGGRHRGSICPSSSPPHERRGAGRVGEVGGGWRTGGREGENQYQALRRQQDGRGRGLPPALANFAYGAMAAFTATLVTYPLDITRTALAFQGVPKRYNSMSEFLRRTARESGVRGLFRGATPTLAMITPQMGVSFAVWEALKGGAPPPAFSGSGSGASPAVTLSWQLGAGMVAGMVGKLVVFPLDTVKKRVQTAV 945
            N  AG  AGAVSR+ TAPLDVAKIR QLD G A+ RY S L    RS+Y EEGL+ LWRGN  AM LW AYTAVQF  Y  +R       A+ + R RQ D                                                                    F  GA AA  AT  TYPLD+ RTA A QGVP+R+ ++  F   T   +GVRG + G +  L  + PQMG++F  +EA+K   PP A +     A+P +   W   AG  AG++ K VV+PLDT+KKRVQ  V
Sbjct:   18 NAVAGGVAGAVSRISTAPLDVAKIRCQLDGGKASPRYGSLL-KTFRSVYAEEGLIGLWRGNPAAMALWIAYTAVQFGLYPLVRDALSASRASAYARPRQTD-------------------------------------------------------------------KFLAGAAAACVATTCTYPLDVMRTAFAGQGVPRRHPTLRAFAANTLHVAGVRGFYAGLSAALVQVAPQMGIAFMAYEAVKDH-PPQALA-----AAPGLATWWPGVAGFSAGLLSKTVVYPLDTLKKRVQARV 244          
BLAST of mRNA_Ecto-sp6_S_contig89.17956.1 vs. uniprot
Match: A0A836C9B4_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9B4_9STRA)

HSP 1 Score: 159 bits (401), Expect = 2.330e-42
Identity = 110/289 (38.06%), Postives = 144/289 (49.83%), Query Frame = 1
Query:   73 FAGATAGAVSRVLTAPLDVAKIRFQLDHG-ATRRYDSTLWAAMRSIYGEEGLVTLWRGNLPAMFLWSAYTAVQFSAYEQLRATDFLRSRQHDSSSGSGGGRHRGSICPSSSPPHERRGAGRVGEVGGGWRTGGREGENQYQALRRQQDGRGRGLPPALANFAYGAMAAFTATLVTYPLDITRTALAFQGVPKRYNSMSEFLRRTARESGVRGLFRGATPTLAMITPQMGVSFAVWEALKGGAPPPAFSGSGSGASPAVTLSWQLGAGMVAGMVGKLVVFPLDTVKKRVQ 936
            FAG  +GAVSR+ TAPLDVAKIR QLD G  + RYD  L    RS+Y EEGLV+LWRG+  AM LW +Y+ VQF  Y   R    +R                                         WR   R    +  +L  QQ  R          F  GA A   AT  TYP D+ RTA A QGVP+++ ++  F+  T R  G RGL+ G TP +  + PQ+G++F  +EA++   P      +   A PAV   W   AG  AG+V K+ V+P+DT+KKR+Q
Sbjct:   33 FAGCVSGAVSRLATAPLDVAKIRCQLDGGRGSARYDGLLMT-FRSVYAEEGLVSLWRGSPAAMMLWVSYSGVQFGVYPVFRRL-LMR-----------------------------------------WR---RWAHQEEASLFLQQRDR----------FLAGAAAGCVATTATYPFDVMRTAFAGQGVPRQHETLHAFVAGTLRTKGARGLYAGLTPAIMQMAPQIGIAFVCYEAMRDNVP------AALRALPAVGAWWPAAAGFTAGLVSKIAVYPVDTLKKRMQ 259          
BLAST of mRNA_Ecto-sp6_S_contig89.17956.1 vs. uniprot
Match: A0A329T089_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329T089_9STRA)

HSP 1 Score: 139 bits (351), Expect = 5.000e-35
Identity = 103/296 (34.80%), Postives = 141/296 (47.64%), Query Frame = 1
Query:   73 FAGATAGAVSRVLTAPLDVAKIRFQLD-----HGATRRYDSTLWAAMRSIYGEEGLVTLWRGNLPAMFLWSAYTAVQFSAYEQLRATDFLRSRQHDSSSGSGGGRHRGSICPSSSPPHERRGAGRVGEVGGGWRTGGREGENQYQALRRQQDGRGRGLPPALANFAYGAMAAFTATLVTYPLDITRTALAFQGVPKRYNSMSEFLRRTARESGVRGLFRGATPTLAMITPQMGVSFAVWEALKGGAPPPAFSGSGSGAS---PAVTLSWQLGAGMVAGMVGKLVVFPLDTVKKRVQ 936
            FAGA +GAV+R++ APLD+ KIRFQ+      +G      + L  A+RSIY EEGL + WRGNL A  LW  Y+A+QF++Y +L    + RS   D+                                                           G P  +   A GA+A  TAT+VTYPLD+ RTA A QG+PKR+ +M   +  T    G+RG + G   T+  I P +G+SF ++  L   +         S      P +T    +G G VAG+V KL V+PLDTVKKR+Q
Sbjct:   18 FAGAVSGAVTRLVAAPLDLLKIRFQVQPAPIANGHVEAKYAGLLQAVRSIYAEEGLRSFWRGNLAASGLWVGYSALQFASYRELNRR-WERSENSDT----------------------------------------------------------LGAPAVVITAASGAVAGVTATVVTYPLDLFRTAFASQGMPKRFPTMHSLVLHTWATQGIRGFYSGLGATVFQIAPYIGLSFGIYSTLSEMSVKNRSKQEESETGAWLPLMTALSYVGNGAVAGLVSKLAVYPLDTVKKRMQ 254          
BLAST of mRNA_Ecto-sp6_S_contig89.17956.1 vs. uniprot
Match: A0A7S3HFE2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HFE2_9STRA)

HSP 1 Score: 139 bits (350), Expect = 7.610e-35
Identity = 111/322 (34.47%), Postives = 153/322 (47.52%), Query Frame = 1
Query:   25 LTAVLTSKALEVARNGFAGATAGAVSRVLTAPLDVAKIRFQLDHGATRRYDSTLWAAMRSIYGEEGLVTLWRGNLPAMFLWSAYTAVQFSAYEQLRATDFLRSRQHDSSSGSGGGRHRGSICPSSSPPHERRGAGRVGEVGGGWRTGGREGENQYQALRRQQDGRGRGLPPALANFAYGAMAAFTATLVTYPLDITRTALAFQGVPKRYNSMSEFLRRTARESGVRGLFRGATPTLAMITPQMGVSFAVWEALKGGA---PPPAFSGSGSG-ASPAVTLSWQ-LGAGMVAGMVG---KLVVFPLDTVKKRVQTAVRTRIREE 966
            +T ++ SK ++V  +  AGA AGA++R+++AP DV KIRFQL      +Y S L  ++R +  EEG+++LW+GNL A +LW +Y  VQFS Y  L+                                       R GE          +  N +Q     Q G G     A   F  GA A   + +VTYP DI RT  A QG    + SM+ F+  T R +GV+G + G  P +  ITPQMG++FA +E  +  A   P P   G   G      +  W  L  G+  G  G   KL+V+PLDTVKKR+Q  V T    E
Sbjct:   11 VTEIIKSK-VKVTDDAVAGAAAGAIARMISAPFDVVKIRFQLQSQVNPKYKSVL-QSLRIVVKEEGILSLWKGNLSASYLWISYMMVQFSMYGVLK---------------------------------------RFGE----------KIANPFQGSGSSQKG-GEKAWQAFTQFLAGAGAGTASVVVTYPFDIMRTQFALQGQNVVFKSMASFIAHTYRTTGVKGFYAGLVPAMVGITPQMGLNFAFYETFRAIAMPEPSPLKPGRSQGDKGQKDSFGWATLKKGVCGGAAGGLSKLIVYPLDTVKKRMQGQVLTHTLSE 280          
BLAST of mRNA_Ecto-sp6_S_contig89.17956.1 vs. uniprot
Match: A0A2D4C4T9_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C4T9_PYTIN)

HSP 1 Score: 137 bits (346), Expect = 1.730e-34
Identity = 107/305 (35.08%), Postives = 141/305 (46.23%), Query Frame = 1
Query:   76 AGATAGAVSRVLTAPLDVAKIRFQLD-------HGATRRYDSTLWAAMRSIYGEEGLVTLWRGNLPAMFLWSAYTAVQFSAYEQLRA--TDFLRSRQHDSSSGSGGGRHRGSICPSSSPPHERRGAGRVGEVGGGWRTGGREGENQYQALRRQQDGRGRGLPPALANFAYGAMAAFTATLVTYPLDITRTALAFQGVPKRYNSMSEFLRRTARESGVRGLFRGATPTLAMITPQMGVSFAVWEALKGGAPPPAFSGSGSGASPAVTLSWQL---GAGMVAGMVGKLVVFPLDTVKKRVQTAVRTR 954
            AGA AG VSR++ AP D+ KIRFQL        H  + +Y S L  ++RSI+ EEGL + WRGNL A  LW  Y+A+QF +Y  L A  +D +R+ QH +                                                                + +   GA A   AT+VTYPLD+ RT  A QGVPKR+ +++   R T    GVRGL+ G  P L  I P MG+SF ++ +L         S       P  +L W L   G G  AG++ K VV+PLDTVKKR+Q    TR
Sbjct:   16 AGAVAGGVSRLVAAPFDLVKIRFQLQQAPISSSHQGSAKYVSLL-QSVRSIHSEEGLRSFWRGNLAATKLWVGYSAIQFGSYRALNAAWSDDMRT-QHKT----------------------------------------------------------------VVSSVNGACAGVIATIVTYPLDLFRTIFASQGVPKRFPTLASLARHTLSTRGVRGLYSGIGPALFQIAPYMGLSFGIYSSLNAAIAEHNASIHAEPPRPG-SLVWLLSYVGTGAAAGLLSKTVVYPLDTVKKRMQMREMTR 253          
BLAST of mRNA_Ecto-sp6_S_contig89.17956.1 vs. uniprot
Match: D0NCY4_PHYIT (Mitochondrial Carrier (MC) Family n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NCY4_PHYIT)

HSP 1 Score: 137 bits (346), Expect = 2.500e-34
Identity = 104/294 (35.37%), Postives = 140/294 (47.62%), Query Frame = 1
Query:   73 FAGATAGAVSRVLTAPLDVAKIRFQLDHGATRRYDST---LWAAMRSIYGEEGLVTLWRGNLPAMFLWSAYTAVQFSAYEQLRATDFLRSRQHDSSSGSGGGRHRGSICPSSSPPHERRGAGRVGEVGGGWRTGGREGENQYQALRRQQDGRGRGLPPALANFAYGAMAAFTATLVTYPLDITRTALAFQGVPKRYNSMSEFLRRTARESGVRGLFRGATPTLAMITPQMGVSFAVWEALKGGAPP---PAFSGSGSGASPAVTLSWQLGAGMVAGMVGKLVVFPLDTVKKRVQ 936
             AGA +G  +R++ APLD+ KIRFQ+    +   ++    L  A+RSIY EEGL + WRGNL A  LW  Y+A+QF++Y +L                          C                     W   G        AL         G+P ++     GA A  TAT+VTYPLD+ RTA A QG+PKR+ +M   +  T    GVRG + G   T+  I P MG+SF+++ AL   A         G      P  T+    G+G VAG+V KL V+PLDTVKKR+Q
Sbjct:   17 LAGAVSGGATRLVAAPLDLLKIRFQVQTAPSGHIEAKYAGLLQAVRSIYAEEGLRSFWRGNLAASGLWVGYSALQFASYRELTR------------------------C---------------------WEQSG-----SSNAL---------GIPASVVAALNGATAGATATIVTYPLDLFRTAFASQGMPKRFPTMRSLVVHTWTTQGVRGFYSGLGATVFQIVPYMGLSFSIYAALSEIAKKHRNKQEEGRTGAWMPLTTVLSYAGSGAVAGLVSKLAVYPLDTVKKRMQ 251          
BLAST of mRNA_Ecto-sp6_S_contig89.17956.1 vs. uniprot
Match: A0A3M6VWB3_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VWB3_9STRA)

HSP 1 Score: 137 bits (344), Expect = 1.070e-33
Identity = 107/296 (36.15%), Postives = 136/296 (45.95%), Query Frame = 1
Query:   73 FAGATAGAVSRVLTAPLDVAKIRFQLDHGATRRYDS-----TLWAAMRSIYGEEGLVTLWRGNLPAMFLWSAYTAVQFSAYEQLRATDFLRSRQHDSSSGSGGGRHRGSICPSSSPPHERRGAGRVGEVGGGWRTGGREGENQYQALRRQQDGRGRGLPPALANFAYGAMAAFTATLVTYPLDITRTALAFQGVPKRYNSMSEFLRRTARESGVRGLFRGATPTLAMITPQMGVSFAVWEALKGGAPPPAFSGSGSGASPAVTLSWQL---GAGMVAGMVGKLVVFPLDTVKKRVQ 936
            FAGA +G V+R++ APLD+ KIRFQ+  G+     S     TL+ A+ SIY EEGL + WRGNL A  LW  Y+A+QF+ Y  L                          C                     W+  G              D    G+   L +   GAMA  TAT+VTYPLD+ RTA A QG+PKR+ +M           G RG + G   T   I P MG+SF ++  L   A           A   + LS  L   G+G VAG V KLVV+PLDTVKKR+Q
Sbjct:   53 FAGAISGGVTRLIAAPLDLLKIRFQVQPGSLSSTSSGLKYSTLYQAIHSIYAEEGLRSFWRGNLAASGLWVGYSALQFATYRVLNTR-----------------------C---------------------WKKDG--------------DDVKVGISTVLISAFNGAMAGVTATVVTYPLDLFRTAFASQGMPKRFPTMRSLALHMWTTQGFRGFYSGLGATTFQIAPYMGLSFGIYSTLNEVAAQHRSKQENVDADVWMPLSTGLSYVGSGAVAGFVSKLVVYPLDTVKKRMQ 290          
BLAST of mRNA_Ecto-sp6_S_contig89.17956.1 vs. uniprot
Match: A0A5D6Y0B7_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y0B7_9STRA)

HSP 1 Score: 135 bits (340), Expect = 1.850e-33
Identity = 105/295 (35.59%), Postives = 138/295 (46.78%), Query Frame = 1
Query:   76 AGATAGAVSRVLTAPLDVAKIRFQLDHGATRRYDS--------TLWAAMRSIYGEEGLVTLWRGNLPAMFLWSAYTAVQFSAYEQLRATDFLRSRQHDSSSGSGGGRHRGSICPSSSPPHERRGAGRVGEVGGGWRTGGREGENQYQALRRQQDGRGRGLPPALANFAYGAMAAFTATLVTYPLDITRTALAFQGVPKRYNSMSEFLRRTARESGVRGLFRGATPTLAMITPQMGVSFAVWEALKGGAPPPAFSGSGSGASPAVTLSWQLGAGMVAGMVGKLVVFPLDTVKKRVQ 936
            AGA AG V+R++ APLD+ KIRFQ+      R           TL  ++RSI+ EEGL + WRGNL A  LW +Y+A+QF  Y  L                                             GG W        +++   R            A  +   GA+A   AT  TYPLD+ RT LA QGVPK++ +M      T    GVRG + G   TL  I P MG+SF ++ +L   A         SGA  A+ LS+ +GAG VAG++ KL V+PLDTVKKR+Q
Sbjct:   23 AGAVAGGVTRMIAAPLDLIKIRFQVQQAPISRATGHQHAAKYVTLLQSLRSIHSEEGLRSFWRGNLAATGLWVSYSAIQFGCYRSL---------------------------------------------GGLW--------SEHFVERHG----------AAVSTLNGALAGVVATAATYPLDLFRTVLASQGVPKQFPTMRSLAAHTWAARGVRGFYSGLGATLFQIAPYMGLSFGLYASLNAAAAARVDLAHASGA--ALALSY-VGAGAVAGLLSKLAVYPLDTVKKRMQ 251          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig89.17956.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LK96_ECTSI4.450e-21796.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KH83_9PHAE1.470e-19694.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836C8L1_9STRA2.920e-4439.20Mitochondrial substrate/solute carrier n=1 Tax=Tri... [more]
A0A836C9B4_9STRA2.330e-4238.06Mitochondrial carrier domain-containing protein n=... [more]
A0A329T089_9STRA5.000e-3534.80Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A7S3HFE2_9STRA7.610e-3534.47Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A2D4C4T9_PYTIN1.730e-3435.08Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
D0NCY4_PHYIT2.500e-3435.37Mitochondrial Carrier (MC) Family n=2 Tax=Phytopht... [more]
A0A3M6VWB3_9STRA1.070e-3336.15Uncharacterized protein n=2 Tax=Peronospora effusa... [more]
A0A5D6Y0B7_9STRA1.850e-3335.59Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig89contigEcto-sp6_S_contig89:461306..466701 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score615.9
Seed ortholog evalue1.1e-173
Seed eggNOG ortholog2880.D8LK96
Model size996
KEGG koko:K15108
KEGG TC2.A.29.16,2.A.29.28
Hectar predicted targeting categoryother localisation
Exons5
EggNOG free text desc.mitochondrial transport
EggNOG OGsKOG0752@1,KOG0752@2759
Ec32 ortholog descriptionMitochondrial carrier domain
Ec32 orthologEc-16_002560.1
Cds size996
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350511.1207786-CDS-Ecto-sp6_S_contig89:461305..4616681682350511.1207786-CDS-Ecto-sp6_S_contig89:461305..461668Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig89 461306..461668 -
1682350511.142157-CDS-Ecto-sp6_S_contig89:462723..4631171682350511.142157-CDS-Ecto-sp6_S_contig89:462723..463117Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig89 462724..463117 -
1682350511.1530516-CDS-Ecto-sp6_S_contig89:463845..4639441682350511.1530516-CDS-Ecto-sp6_S_contig89:463845..463944Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig89 463846..463944 -
1682350511.162872-CDS-Ecto-sp6_S_contig89:464662..4647081682350511.162872-CDS-Ecto-sp6_S_contig89:464662..464708Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig89 464663..464708 -
1682350511.1775682-CDS-Ecto-sp6_S_contig89:466607..4667011682350511.1775682-CDS-Ecto-sp6_S_contig89:466607..466701Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig89 466608..466701 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig89.17956.1prot_Ecto-sp6_S_contig89.17956.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig89 461306..466701 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig89.17956.1

>prot_Ecto-sp6_S_contig89.17956.1 ID=prot_Ecto-sp6_S_contig89.17956.1|Name=mRNA_Ecto-sp6_S_contig89.17956.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=332bp
QDGEPRAALTAVLTSKALEVARNGFAGATAGAVSRVLTAPLDVAKIRFQL
DHGATRRYDSTLWAAMRSIYGEEGLVTLWRGNLPAMFLWSAYTAVQFSAY
EQLRATDFLRSRQHDSSSGSGGGRHRGSICPSSSPPHERRGAGRVGEVGG
GWRTGGREGENQYQALRRQQDGRGRGLPPALANFAYGAMAAFTATLVTYP
LDITRTALAFQGVPKRYNSMSEFLRRTARESGVRGLFRGATPTLAMITPQ
MGVSFAVWEALKGGAPPPAFSGSGSGASPAVTLSWQLGAGMVAGMVGKLV
VFPLDTVKKRVQTAVRTRIREEEEEVGRGLF*
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mRNA from alignment at Ecto-sp6_S_contig89:461306..466701-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig89.17956.1 ID=mRNA_Ecto-sp6_S_contig89.17956.1|Name=mRNA_Ecto-sp6_S_contig89.17956.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=5396bp|location=Sequence derived from alignment at Ecto-sp6_S_contig89:461306..466701- (Ectocarpus species6 EcLAC_371)
CAGGATGGAGAGCCCCGCGCTGCGCTGACGGCCGTGCTCACCTCGAAGGC GCTCGAGGTCGCACGCAATGGCTTCGCCGGGGCGACGGCTGGCGGTGAGA ACAAAACTGCTGCATGTGATGATCACGTCACGAACCGTCACGTCACTCGT GCTCGCTGTGCTGCTGCTGCTGCTGCTGCTGCGGTGGTTCTCGCCTAGCT TTCAGTTGTGCCAACAAAGGCGGCCGGTTGAAGCAGGCGTTGCCTAGAAG GAAGCAACAGCAGCTCCAGCTGCTGCTGTCATGGCGGCTATGAACAATTC AGCGCAGTACCAACCAGAGACCCGTACAAATGAGATTTCCAGCACAGCAT ATGTTGCTGATCAGCCGTAACAAGAACTCGCAATTGCGCCGCAGTTACCT CGAGGCTGCCGGCTTTTCGGCTTTTTTATTTTATTTTTCTTAGTATGACA CAACGAAACCATCTCTATCATAGCTTTTTATTTCATCAGTTTTGTATGGC TTTTCGGTCATTTCAGCCAGGCTCGCGAGAACAATCCACACGTGCAGAAT GAGGAATGAGGCCCTTATCTACCATTTTTTAGAAAAGTACGTGGTACATG CACCACACCAACACCAGAGAAAGACTACCAGAAAACACCCGGCTGTCTGG CGTGCTGAGCAAGAAACACTAAAATAATTAAGGAATAATAAAACTATAAT AATAATACCTGCTGCTTCTGCGGTTGCTGCTGCTGTATCAGCAGATCAGC AGCGAACACGACCTGTCGCTGTCTACGTGCAGTACTTCAGTAGGAGCAAG TAGAAGAGCAGAGCAATAGGTCAGGGAGAGCTTCATGGCGAGCTACCGTC GGCAGTTGCTATACTTTGGGGCAATCGTGGAAAGTTGAGCGGACGATGGT TCGTGCAGGGTACACCTGAGCGTCGATGAATCAATCTGAGAGTATACACC TCTGAGGTTTTTATCGAATAGGCATCGCGACCTGCAAATCAAACGACACG CCCACTCGGGTGGTATCAATGTATCACTTCCTCAGGAAGGTGGGATGGTG CCGTATTTGAGTGGCAAAGCCCGAAGCACCAAGAGAGCGCCAATGCCGAA ATGATACGATCTGATTTACTTGTCGTATGCATCCACTACACTCGAAATGG TCTTGATGAGATTGTAGCGCAAGGCGCAGAGATGCCTACGTAGAGCGACT TTCGAAGCTCAAGTTTCTCCACAACCAAGAGGGTGCGGGAAGAGCCTCAT GCGCCTACGGAAAGCCCTCGACGAGATGTTTCCGAAACGAACAATCTTAG TGTCGGCACCATCAAGCTTGGTTGTCGAGCAATGGAGGTTTGAAAGGCGC TCTAAGGGGGGGCGGCGGCCATCTCTCCGCCTCTTGCGGTATCTCCACCC CCACCCTCTTCGGCTCGCCCGCTCCGCTCCGGCACCGGCATCTCTTATCA AATATTCTCCACGCAACCTTCTGGCACAGACAAGGACTGAAAAGGGTTAG AAGGTTTGGGTAAGGGTTAGAGGGTTTGTGTTAGGGTTAGAGTTAGAGGG TTAGGGTTAGAGTTAGGGTTAGGGTTAGGGTTAGAGTTAGAGTTAGGGTT AGGGTTAGGATTGTTAGGGAAAATGACCCCTCCCTCTTGTTGTGTTGTGT GCGGCAATCGAGCTTTGAACTTCGGCCCAGCAGGGTCTGTCATACACCGC CGAACGCCAAGTGTAGTATACCCTGACTGCGGTTGCCGCTGATGTAGACG CTTTCGACTACGCCGCGTACATCCCCGATGGACAAAGTACTCCCGTTGGA GAAACGCCTGTCAGCTGTGTGTACGGTGCTACAACAGCAGTCGCGTAGCG CGAACAAGCAGAAACTACTGCTGCTGTAGCACTTGTGCTTATTTGCCCGC ACAGCAACGCCTGACTACTGTCTGACGCATGTGCACCTTCTCTGCCCGCT GCCCCACGTCGTCCCTGTTTTGCAATCCGCTGGGCCCCTGCAGCGGTGTC CCGCGTGCTTACTGCTCCCCTGGACGTTGCAAAAATAAGGTGAGAGATAG GGCTGCAGTGGGCAACACCTAGCGTCAATCAAGCCTTGGGCCCTTTCCAC CCGTACCGACATCTGCGTCAGCTCCCCTTTGAAGTTTTCACAAGTATATG TGAGGAAAAACAGCGAAAGTTAGGTATCAACCGCCGTGGAAGCGTAGTAG ATTCAGTGCTGCTGTCTGGTCGGGGAGGGCCGTTGTAGCCTTTGAATATT CTCCTCCATTTGGCTTCCGACGCGTCCCGTCCTTGTGCCGATTGTTCCTT GTTGCGAGGAGTACCCCGTCTTTGTTGGAGCGGGCGGTGCGTCCTTGTTC GGTACAGTACCAATTTTGGTTCTCTTTCAGAACCAGCACCTCCCCAACGT CCTTCCTGAACCCAAAGACAACAAATACCTTGGGGTTTAGTGGTATACAG TAGTACAGACGCCCTGGAAAGATTCACGACCGGCGCATAGGTTTAGACCA AACATGAACAATGGCGTGAAACCCACGACAGTTCGCAATATGGTAAGAAC CCCTGTTCCCTCACCTCGCGTAGAACCGGGTGTTCGCTAGAGTAGGTGGA AGCGCCCGTACTCCGTTTCTCAACAAGGAACGCGGCCTGCAAGGGGAAAG ACTACTTTGTACTTGTATAATACAAGCGACGGAATGAACGACCCTCCCCC CCCCCTTCCCAATCGCGTGCCCCCCCCCCCCTCCCCCCTTGCCTCCCGTG TGGTCAGGTTCCAGCTGGACCACGGCGCGACGAGACGCTACGACTCGACC CTGTGGGCGGCGATGCGGAGCATCTACGGCGAGGAGGGATTGGTCACGTT ATGGAGGTACGTCAGTCGAACCTCGAATAACGACACATCACACCTGGTAT TATTTTGCTAGAATTTGTGTCCTTTTAGCCGGGAAGTGTCCTTAAGGTTG ATGTGTATGATACCCGTCCTTGTGTTGTGCATTCTCCGAGCCACACCCTC TGCCGGTGAAGAAAAAGTTGTCCTTAACCGGGGGAGTTTCGTTAATTTTT GGTGTCCTTCAACGAGGCACGACTGTACATACATATATATGTAGGTGGAC TAAACGCTTGTGATCATCTCCTCTCCCTCGGCATTCCACCAACCAACCGT CGACCAAGGTCATGCATGCGCGCGTACCCAATCCCGACTAAACCATGCAA AATATTTCACCTCTTGACGCGCCCCCCAGAAGTAGACGGGGCAGACTGCT GTGTCTCGGTGCGTACTTTTTTCAAGTCTGTCAGAAGAACGCATCGTAGT ATCATACCGATTAAGAAGCTGGACGCCCGTGGCATATTCTCCACTTTTTG GTATCACCTGCTTGGTCTTGGCTCCCTTGGCATCACTTCCTTTTTTGTCG CCCCCGGTAGATATGACATGACCTTTCGACATAGGACAATAACCGCCAAA TCTTGGAGAGCCACGTGATATTCAAACACACACCACATCATGTCCGACAT TTTTTACCCTTTGAAACCCTCTTCCGTACCGCGTACCGCCACAAAAAAAA AAAAAACACGGGACCCCGCCGGGCGGGGGGATAGAGGAAACCTACCGGCG ATGTTTCTTTGGTCGGCCTACACGGCGGTCCAGTTTAGCGCGTACGAGCA GCTTCGAGCCACGGACTTCCTCCGCTCCCGACAGCACGACAGCAGCAGCG GCAGCGGCGGCGGCAGGCACCGCGGCAGTATCTGTCCGTCCTCGTCGCCG CCTCACGAACGGCGAGGAGCCGGCAGAGTCGGGGAGGTGGGGGGGGGGTG GAGGACGGGAGGGCGGGAAGGCGAGAATCAGTACCAAGCGCTTCGGCGGC AACAGGATGGGCGAGGCCGAGGTCTTCCCCCAGCGCTGGCGAACTTCGCG TACGGTGCGATGGCCGCCTTCACCGCCACCCTCGTCACGTACCCGCTCGA CATCACTCGCACAGCGCTCGCGTTTCAAGTGAGAGAGGGCTGAATCATTC TATTTTGTTCTTTGCGTTGCCCCCCCTCCCCCATGTGAGAGCCTGGTCCC GTGAGAGCCCGCCGTGCTCCGTCCGGCTTTGAAGGGATGCGAGGTCAATG GTCTAACGACTACGGCATGCACGACTTTGAGTACCCCCCCCTGACCTTTT GTGAAAAGTAGCCTGGGCCGGCGAAAACCCGGCATACGTATCGCTCCGTC CTGGCAATGTTTGGATGCGAGGTTACTTGTCTATCGACTACGGCATGCGT TTGCATGCGTTTACCTCCCCCCCCGACTCTCCCACCCTGCCGCCTTTGAT TGGTCTTGTCCAGAAAGTGCCGTTTTGTCTATTATGAAGGCTTTGTTCTT AGAGCGCTGCTTTGATTTTTGACTTTATCGCGCAAGCGCATGCTTCTTCC CCGGTGTGCGGTCCTTGTGTTTGTTATAAAAAAGGTTCACTGGTTGGTTG CCAAGTGTACGGCTTGTCGATGTTCTTTGGCGTGGGATGCTCAGAAAGAC CCCCTGTGACCCGGAACTCGTGACTGAGCACGGGGACACTGATCGGTTTC GAAAGTTGTTTACAACTCGTCATTAGGGCAAAAAGAAGACAGAATGTGAC GCAAGATACCACATCCCCTGGACCGAACTTCAAAGCTCGATCACCGCCCA CGAAGAACCCAAGAGTTAAATGGTCCGTATTTTCGGAAAGCCGTCGACGG GACGATTCCAACGCCGCCGGCATCATCGAAATATTCCGTCGGCGTTTGCG CGAAAGAGCAGTCCGGCTTGGAAAATCTGGCCAGGGGGGAGTGGGGTATC TCGTGCGACCTGTCGTACTTTAGCCATTCGATTTTCCCGGCGGGGGCGTG TTATTTTTTTTTTTCTCGTTAGTTCTCTTGCAGGCTGGAAAACAACGGGG GGGGGGGGTCCTATCATGCTTCTTCAGTGGAAGCTTGGGTACCCCCCCAG TGTGTTGCGGCTCTCGCTCCACTGCGTAGAACACCCTATATTAAACACGC GTGTTTCCCACTCGCTGTCCTCCCCACGCGCAGGGAGTTCCGAAGCGATA CAACAGCATGTCGGAGTTCTTGCGGCGCACGGCCCGCGAGTCCGGGGTCA GGGGACTGTTCAGGGGCGCGACGCCGACGCTGGCGATGATCACCCCACAG ATGGGAGTGAGCTTCGCGGTGTGGGAGGCCCTCAAGGGCGGCGCCCCCCC CCCCGCGTTTTCTGGGTCGGGTTCGGGTGCGTCGCCGGCGGTGACGTTGT CGTGGCAGCTGGGCGCGGGTATGGTCGCCGGGATGGTCGGGAAGCTGGTG GTTTTCCCCCTGGACACAGTGAAGAAGAGAGTGCAGACTGCGGTGAGAAC AAGGATTCGCGAGGAGGAGGAGGAGGTGGGGAGGGGGCTCTTTTGA
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig89:461306..466701-

>mRNA_Ecto-sp6_S_contig89.17956.1 ID=mRNA_Ecto-sp6_S_contig89.17956.1|Name=mRNA_Ecto-sp6_S_contig89.17956.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=996bp|location=Sequence derived from alignment at Ecto-sp6_S_contig89:461306..466701- (Ectocarpus species6 EcLAC_371)
CAGGATGGAGAGCCCCGCGCTGCGCTGACGGCCGTGCTCACCTCGAAGGC
GCTCGAGGTCGCACGCAATGGCTTCGCCGGGGCGACGGCTGGCGCGGTGT
CCCGCGTGCTTACTGCTCCCCTGGACGTTGCAAAAATAAGGTTCCAGCTG
GACCACGGCGCGACGAGACGCTACGACTCGACCCTGTGGGCGGCGATGCG
GAGCATCTACGGCGAGGAGGGATTGGTCACGTTATGGAGAGGAAACCTAC
CGGCGATGTTTCTTTGGTCGGCCTACACGGCGGTCCAGTTTAGCGCGTAC
GAGCAGCTTCGAGCCACGGACTTCCTCCGCTCCCGACAGCACGACAGCAG
CAGCGGCAGCGGCGGCGGCAGGCACCGCGGCAGTATCTGTCCGTCCTCGT
CGCCGCCTCACGAACGGCGAGGAGCCGGCAGAGTCGGGGAGGTGGGGGGG
GGGTGGAGGACGGGAGGGCGGGAAGGCGAGAATCAGTACCAAGCGCTTCG
GCGGCAACAGGATGGGCGAGGCCGAGGTCTTCCCCCAGCGCTGGCGAACT
TCGCGTACGGTGCGATGGCCGCCTTCACCGCCACCCTCGTCACGTACCCG
CTCGACATCACTCGCACAGCGCTCGCGTTTCAAGGAGTTCCGAAGCGATA
CAACAGCATGTCGGAGTTCTTGCGGCGCACGGCCCGCGAGTCCGGGGTCA
GGGGACTGTTCAGGGGCGCGACGCCGACGCTGGCGATGATCACCCCACAG
ATGGGAGTGAGCTTCGCGGTGTGGGAGGCCCTCAAGGGCGGCGCCCCCCC
CCCCGCGTTTTCTGGGTCGGGTTCGGGTGCGTCGCCGGCGGTGACGTTGT
CGTGGCAGCTGGGCGCGGGTATGGTCGCCGGGATGGTCGGGAAGCTGGTG
GTTTTCCCCCTGGACACAGTGAAGAAGAGAGTGCAGACTGCGGTGAGAAC
AAGGATTCGCGAGGAGGAGGAGGAGGTGGGGAGGGGGCTCTTTTGA
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