mRNA_Ecto-sp6_S_contig89.17944.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig89.17944.1
Unique NamemRNA_Ecto-sp6_S_contig89.17944.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
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BLAST of mRNA_Ecto-sp6_S_contig89.17944.1 vs. uniprot
Match: D8LKE1_ECTSI (Similar to retinitis pigmentosa GTPase regulator n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKE1_ECTSI)

HSP 1 Score: 828 bits (2139), Expect = 3.980e-288
Identity = 696/756 (92.06%), Postives = 700/756 (92.59%), Query Frame = 3 
Query:   78 LGLQDVQKTVCIPQEVTFFSDKPLVQAAAGDFHMVALSRKREVFSWGYGAEGQGGHGSLLHMRMPRRVSSLQEVPVAQVVCGPWWSMAVTVDGYCYAWGSADGGWTGLTRPPGLRVVDPGPSADRAVETQSFDSTHNMHVPALVYSLAPYKVLQVGCGGGHTLVVAKRRARPVSPGTNGAPGAVPTEVPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--ARNVSLSSVKHARQQXXXXXXXXXXXXXXXXXRR-------RRAPTGPDLTASTSESGWESGAVDEVATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGERFDAARVRSRANSVPVPGGAGAXXXXXXXXXXXXXXXXXXXXXXXXXXVIPPSPESLREETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRRADGRRASPAHGVALPAVPAAKSDGLRSAAVAAVPRRPESPVXXXXXXXXXGHDEAPPEVTPGGRAGDRKFLSLPGGRASRSSSRTGDXXXXXXXXECAGRRRGGVEGQTGSAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAVRCEEEYVAKVFSYCRHGRLAEVQEALGSGFDVCRRRDENGNTLLHCAAQNGLRGMCKSVLQEGRGQPLNVKNNRGNTALHYAFAFGFQQLGKYLASKGADDSLLNDQGLTCYEGLERQDLESL 2318
            LGLQD +KTVCIPQEVTFFSDKPLVQAAAGDFHMVALSRKREVFSWGYGAEGQGGHGSLLHMRMPRRVSSLQEVPVAQVVCGPWWSMA+TVDGYCYAWGSADGGWTGLTRPPGLRVVDPGPSADRAVETQSFDSTHN+HVPALVYSLAPYKVLQVGCGGGHTLVVAKRRARPVSPGTNG PGAVPTEVPG XXXXXXXXXXXXXXXXXXXX              XXXXXXXXXXXXXXXXXXXXXX  ARNVSLSSVKHARQQXXXXXXXXXXXXXXXXX         RRAPTGPD+TASTSESGWESGAVDEVATAXXXXXXXXXXXXXXXXXX     XXXXXXXXXXXXXXXXXXXXXXXXXAGERFDAARVRSRANSV VPGGA  XXXXXXXXXXXXXXXXXXXXXXXXXX             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRRADGRRASPAHGVALPAVPAAKSDGLRSAAVAAVPRRPESPV XXXXX     DE PPEVTPGGRAGDRKFLSLPGGRASRSSSRTGDXXXXXXXXECAGRRRGGVEGQTGSAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAVRCEEEYVAKVFSYCRHGRLAEVQEALGSGFDVCRRRDENGNTLLHCAAQNGLRGMCKSVLQEGRGQPLNVKNNRGNTALHYAFAFGFQQLGKYLASKGADDSLLNDQGLTCYEGLERQDLESL
Sbjct:  240 LGLQDAEKTVCIPQEVTFFSDKPLVQAAAGDFHMVALSRKREVFSWGYGAEGQGGHGSLLHMRMPRRVSSLQEVPVAQVVCGPWWSMAITVDGYCYAWGSADGGWTGLTRPPGLRVVDPGPSADRAVETQSFDSTHNVHVPALVYSLAPYKVLQVGCGGGHTLVVAKRRARPVSPGTNGQPGAVPTEVPGGXXXXXXXXXXXXXXXXXXXXESSPLMSSLSPRVPXXXXXXXXXXXXXXXXXXXXXXXXARNVSLSSVKHARQQXXXXXXXXXXXXXXXXXXXXXXXXXXRRAPTGPDVTASTSESGWESGAVDEVATAXXXXXXXXXXXXXXXXXXKWASTXXXXXXXXXXXXXXXXXXXXXXXXXAGERFDAARVRSRANSVTVPGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRRADGRRASPAHGVALPAVPAAKSDGLRSAAVAAVPRRPESPVAXXXXX----RDEPPPEVTPGGRAGDRKFLSLPGGRASRSSSRTGDXXXXXXXXECAGRRRGGVEGQTGSAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAVRCEEEYVAKVFSYCRHGRLAEVQEALGSGFDVCRRRDENGNTLLHCAAQNGLRGMCKSVLQEGRGQPLNVKNNRGNTALHYAFAFGFQQLGKYLASKGADDSLLNDQGLTCYEGLERQDLESL 983
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BLAST of mRNA_Ecto-sp6_S_contig89.17944.1 vs. uniprot
Match: A0A835Z434_9STRA (Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z434_9STRA)

HSP 1 Score: 153 bits (386), Expect = 2.550e-37
Identity = 85/179 (47.49%), Postives = 107/179 (59.78%), Query Frame = 3 
Query:   78 LGLQDVQKTVCIPQEVTFFSDKPL--VQAAAGDFHMVALSRKREVFSWGYGAEGQGGHGSLLHMRMPRRVSSLQEVPVAQVVCGPWWSMAVTVDGYCYAWGSADGGWTGLTRPPG-LRVVDPGPSAD-------RAVETQSFDSTHNMHVPALVYSLAPYKVLQVGCGGGHTLVVAKRR 584
            LG+ D  K    P EV     + +  V+ A G++H +A + +  V+SWGYG +GQ GHG   H+R PR V  L+  PV QV CG  WSMAVT  G+ YAWG ADGGWTGL  PPG LR V+PGP A         A   ++FDS H + +P  V SL    V  V CGGGHTLV+A++R
Sbjct:  147 LGVADPPKVAPYPVEVGALRGQRVAEVRVACGEYHNLARTERGAVYSWGYGLDGQCGHGGAQHLRTPRIVERLKGNPVVQVACGSLWSMAVTSTGHLYAWGCADGGWTGLQCPPGVLRCVEPGPVAALDSEAGAAASSARTFDSDHIVLLPERVASLPGVAVEAVACGGGHTLVLARQR 325
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BLAST of mRNA_Ecto-sp6_S_contig89.17944.1 vs. uniprot
Match: A0A7S2SVF6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVF6_9STRA)

HSP 1 Score: 122 bits (307), Expect = 6.820e-29
Identity = 63/113 (55.75%), Postives = 78/113 (69.03%), Query Frame = 3 
Query: 1962 EYVAKVFSYCRHGRLAEVQEALGSGFDVCRRRDENGNTLLHCAAQNGLRGMCKSVLQEGRGQPLNVKNNRGNTALHYAFAFGFQQLGKYLASKGADDSLLNDQGLTCYEGLER 2300
            EY ++VFS+CRH RL EV+ AL +GF +   +DENGNTLL  AAQNGLR   K  L+  RG  +N++N RGNT LHY FA+G   L  YL  KGADDS+LN  GL+ YEG  +
Sbjct:   26 EYRSQVFSFCRHKRLREVEAALDNGFPIDE-QDENGNTLLFVAAQNGLRQAAKLCLR--RGAHVNLQNLRGNTPLHYCFAYGHSGLAAYLIEKGADDSILNSDGLSVYEGTAK 135
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BLAST of mRNA_Ecto-sp6_S_contig89.17944.1 vs. uniprot
Match: A0A7S2SV12_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SV12_9STRA)

HSP 1 Score: 115 bits (288), Expect = 9.600e-27
Identity = 54/108 (50.00%), Postives = 73/108 (67.59%), Query Frame = 3 
Query:   78 LGLQDVQKTVCI-PQEVTFFSDKPLVQAAAGDFHMVALSRKREVFSWGYGAEGQGGHGSLLHMRMPRRVSSLQEVPVAQVVCGPWWSMAVTVDGYCYAWGSADGGWTG 398
            LGL +++K +   PQ V+      +   A+GDFHM+AL+R R VF+WGYGAEGQ G G+ LH+R PR V +L+ V V+++ CG W S A++ DGY Y WG  DGGW G
Sbjct:    8 LGLPNMKKKLFFRPQRVSTLDSFGVTSLASGDFHMLALTRDRRVFAWGYGAEGQCGQGNSLHLRTPRPVEALRHVLVSKISCGAWHSAALSADGYLYTWGYGDGGWLG 115
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BLAST of mRNA_Ecto-sp6_S_contig89.17944.1 vs. uniprot
Match: A0A7S1C915_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C915_9STRA)

HSP 1 Score: 108 bits (269), Expect = 7.120e-24
Identity = 58/121 (47.93%), Postives = 75/121 (61.98%), Query Frame = 3 
Query: 1938 GAAVRCEEEYVAKVFSYCRHGRLAEVQEALGSGFDVCRRRDENGNTLLHCAAQNGLRGMCKSVLQEGRGQPLNVKNNRGNTALHYAFAFGF-QQLGKYLASKGADDSLLNDQGLTCYEGLE 2297
            G      E+ VA VFS  RH R  EV+  L  G  V   RD++GNT+L  A QNGL+ M K  L+ G    +N +N +GNT LHY F +G+   LG+Y+ SKGAD +L ND GLTC++GLE
Sbjct:   17 GGGPSLSEKEVADVFSLARHNRCKEVEALLDRGVPV-NLRDKHGNTILTIACQNGLKKMAKVALRAGAD--INTRNYKGNTPLHYCFTYGWGDTLGQYMLSKGADGTLRNDLGLTCFQGLE 134
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BLAST of mRNA_Ecto-sp6_S_contig89.17944.1 vs. uniprot
Match: A0A7S3XZ48_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZ48_HETAK)

HSP 1 Score: 104 bits (260), Expect = 7.500e-23
Identity = 53/122 (43.44%), Postives = 78/122 (63.93%), Query Frame = 3 
Query: 1938 GAAVRCEEEYVAKVFSYCRHGRLAEVQEALGSGFDVCRRRDENGNTLLHCAAQNGLRGMCKSVLQEGRGQPLNVKNNRGNTALHYAFAFGF-QQLGKYLASKGADDSLLNDQGLTCYEGLER 2300
            GA    E + +  VFSY RH R+ +++  L +G  V   RD+ GNT+L  A QNG +   K+ L+  RG  +N +N RGNT LH+ F +G+ + LG+YL SKGAD ++ N+ G+TCYEG+ +
Sbjct:    6 GALSAAEAKDLEDVFSYARHNRVDDLERLLDAGMPV-NIRDQYGNTVLCVACQNGHKRAAKAALR--RGADINARNYRGNTPLHFCFTYGYGETLGQYLISKGADPTIRNNDGVTCYEGIRK 124
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BLAST of mRNA_Ecto-sp6_S_contig89.17944.1 vs. uniprot
Match: A0A7S2G301_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G301_9STRA)

HSP 1 Score: 103 bits (257), Expect = 4.380e-22
Identity = 45/84 (53.57%), Postives = 57/84 (67.86%), Query Frame = 3 
Query:  159 AAGDFHMVALSRKREVFSWGYGAEGQGGHGSLLHMRMPRRVSSLQEVPVAQVVCGPWWSMAVTVDGYCYAWGSADGGWTGLTRP 410
            AAGD HM+AL+R R VFSWGY AEGQ GHG+ LH R PR + +L+ V V ++ CG W+S  ++ +G  Y WG  DGGW G   P
Sbjct:   61 AAGDLHMLALTRDRRVFSWGYSAEGQCGHGTWLHGRTPRPIEALRHVLVTKIACGAWFSAVISAEGDLYTWGYGDGGWLGQGAP 144
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BLAST of mRNA_Ecto-sp6_S_contig89.17944.1 vs. uniprot
Match: A0A7R9T857_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9T857_MICPS)

HSP 1 Score: 102 bits (255), Expect = 3.250e-21
Identity = 55/119 (46.22%), Postives = 72/119 (60.50%), Query Frame = 3 
Query: 1962 EYVAKVFSYCRHGRLAEVQEALGSGFDVCRRRDENGNTLLHCAAQNGLRGMCKSVLQEG-------RGQPLNVKNNRGNTALHYAFAFGFQQLGKYLASKGADDSLLNDQGLTCYEGLE 2297
            E + + FS  RHGR+ ++ E   SG D    RD NG TLLH AAQN  R   K VL+         R   ++ +  +G+TALHY FA+G+Q LG YL S GADD++ N  G+TCYEGL+
Sbjct:   20 EDLVEAFSKARHGRVKDLAELFKSGVDPAA-RDINGLTLLHMAAQNNQRKATKLVLKHTDFATNPPRLDLIDAQTKQGHTALHYCFAYGYQDLGNYLLSLGADDTITNVHGMTCYEGLD 137
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BLAST of mRNA_Ecto-sp6_S_contig89.17944.1 vs. uniprot
Match: F0XVE9_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XVE9_AURAN)

HSP 1 Score: 99.0 bits (245), Expect = 3.700e-21
Identity = 46/88 (52.27%), Postives = 61/88 (69.32%), Query Frame = 3 
Query: 2055 RDENGNTLLHCAAQNGLRGMCKSVLQEGRGQPLNVKNNRGNTALHYAFAFGFQQLGKYLASKGADDSLLNDQGLTCYEGLERQDLESL 2318
            +DE GNTLL  A QNG + + K  L+  RG  +N+ NN G T LHYA+A+GF+ + +YL SKGADD   N  GLTCYEGL  Q++E++
Sbjct:   13 QDELGNTLLSVAVQNGNKRIAKLTLR--RGANINLPNNNGQTVLHYAYAYGFEDIAEYLKSKGADDRPKNSDGLTCYEGLSMQEIEAI 98
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BLAST of mRNA_Ecto-sp6_S_contig89.17944.1 vs. uniprot
Match: A0A7S4KK07_GUITH (Hypothetical protein (Fragment) n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4KK07_GUITH)

HSP 1 Score: 102 bits (254), Expect = 9.540e-21
Identity = 57/121 (47.11%), Postives = 75/121 (61.98%), Query Frame = 3 
Query: 1938 GAAVRCEEEYVAKVFSYCRHGRLAEVQEALGSGFDVCRRRDENGNTLLHCAAQNGLRGMCKSVLQEGRGQPLNVKNNRGNTALHYAFAFGFQQLGKYLASKGADDSLLNDQGLTCYEGLER 2300
            G+ V+   E  A  F  CRHGR  E+ + L     V   R+E GNTLL  AAQN  + MCK +LQ  R   LN +N  G TALH++FAFG+ +LGK+L  KGA  ++ N +G+TCYEGL +
Sbjct:  107 GSKVKLTAEEQA-AFQACRHGREDELYKLLEENVHV-NVRNEAGNTLLMVAAQNNQKKMCK-ILQN-RAADLNAQNRMGQTALHFSFAFGYMELGKWLVKKGASTNIKNIEGMTCYEGLSK 223
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig89.17944.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKE1_ECTSI3.980e-28892.06Similar to retinitis pigmentosa GTPase regulator n... [more]
A0A835Z434_9STRA2.550e-3747.49Regulator of chromosome condensation 1/beta-lactam... [more]
A0A7S2SVF6_9STRA6.820e-2955.75Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2SV12_9STRA9.600e-2750.00Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S1C915_9STRA7.120e-2447.93Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A7S3XZ48_HETAK7.500e-2343.44Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2G301_9STRA4.380e-2253.57Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7R9T857_MICPS3.250e-2146.22Hypothetical protein (Fragment) n=1 Tax=Micromonas... [more]
F0XVE9_AURAN3.700e-2152.27Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S4KK07_GUITH9.540e-2147.11Hypothetical protein (Fragment) n=1 Tax=Guillardia... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig89contigEcto-sp6_S_contig89:395329..400834 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score764.6
Seed ortholog evalue4.1e-218
Seed eggNOG ortholog2880.D8LKE1
Model size2377
KEGG koko:K04575
KEGG Pathwayko05014,map05014
Hectar predicted targeting categoryother localisation
Exons7
EggNOG free text desc.guanyl-nucleotide exchange factor activity
EggNOG OGsCOG5184@1,KOG1426@2759
Ec32 ortholog descriptionRegulator of chromosome condensation 1/beta-lactamase-inhibitor protein II
Ec32 orthologEc-16_002650.1
Cds size2145
COG Functional cat.DZ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03036
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig89.17944.1prot_Ecto-sp6_S_contig89.17944.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig89 395385..400217 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350510.4664261-UTR-Ecto-sp6_S_contig89:395328..3953841682350510.4664261-UTR-Ecto-sp6_S_contig89:395328..395384Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig89 395329..395384 -
1682350510.5333946-UTR-Ecto-sp6_S_contig89:400217..4002281682350510.5333946-UTR-Ecto-sp6_S_contig89:400217..400228Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig89 400218..400228 -
1682350510.5437002-UTR-Ecto-sp6_S_contig89:400669..4008341682350510.5437002-UTR-Ecto-sp6_S_contig89:400669..400834Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig89 400670..400834 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350510.4761932-CDS-Ecto-sp6_S_contig89:395384..3954331682350510.4761932-CDS-Ecto-sp6_S_contig89:395384..395433Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig89 395385..395433 -
1682350510.484174-CDS-Ecto-sp6_S_contig89:395810..3959171682350510.484174-CDS-Ecto-sp6_S_contig89:395810..395917Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig89 395811..395917 -
1682350510.4917595-CDS-Ecto-sp6_S_contig89:396720..3982821682350510.4917595-CDS-Ecto-sp6_S_contig89:396720..398282Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig89 396721..398282 -
1682350510.5023952-CDS-Ecto-sp6_S_contig89:398721..3988731682350510.5023952-CDS-Ecto-sp6_S_contig89:398721..398873Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig89 398722..398873 -
1682350510.510255-CDS-Ecto-sp6_S_contig89:399321..3994611682350510.510255-CDS-Ecto-sp6_S_contig89:399321..399461Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig89 399322..399461 -
1682350510.5180404-CDS-Ecto-sp6_S_contig89:400082..4002171682350510.5180404-CDS-Ecto-sp6_S_contig89:400082..400217Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig89 400083..400217 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig89.17944.1

>prot_Ecto-sp6_S_contig89.17944.1 ID=prot_Ecto-sp6_S_contig89.17944.1|Name=mRNA_Ecto-sp6_S_contig89.17944.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=715bp
MVALSRKREVFSWGYGAEGQGGHGSLLHMRMPRRVSSLQEVPVAQVVCGP
WWSMAVTVDGYCYAWGSADGGWTGLTRPPGLRVVDPGPSADRAVETQSFD
STHNMHVPALVYSLAPYKVLQVGCGGGHTLVVAKRRARPVSPGTNGAPGA
VPTEVPGGGGGGGGGGGGGGAKAACPESSPLMSSLSPRVPSSSSSRRSAA
AEAAAAVGAGSSSAARNVSLSSVKHARQQAQAAQAAAAAAGVADSARRRR
APTGPDLTASTSESGWESGAVDEVATAAAVAASVASAAFAATGGGKWAST
SGVAAAPPKQRVQQGRRASTGGGGGAGERFDAARVRSRANSVPVPGGAGA
TAAAAAAAAAAAAAAAAAAAAAAVGVVIPPSPESLREETLLPPPKVSRRR
RTGSSLSPPGGGGVDGGGKVVSKGTSSSSNGRALDGGGGGVVRRADGRRA
SPAHGVALPAVPAAKSDGLRSAAVAAVPRRPESPVAAAAAAAAAGHDEAP
PEVTPGGRAGDRKFLSLPGGRASRSSSRTGDGGGGRRRDECAGRRRGGVE
GQTGSAKTAAAAAAVGGTGGSGRGSSGRQGQGAAGGGGAAVRCEEEYVAK
VFSYCRHGRLAEVQEALGSGFDVCRRRDENGNTLLHCAAQNGLRGMCKSV
LQEGRGQPLNVKNNRGNTALHYAFAFGFQQLGKYLASKGADDSLLNDQGL
TCYEGLERQDLESL*
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mRNA from alignment at Ecto-sp6_S_contig89:395329..400834-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig89.17944.1 ID=mRNA_Ecto-sp6_S_contig89.17944.1|Name=mRNA_Ecto-sp6_S_contig89.17944.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=5506bp|location=Sequence derived from alignment at Ecto-sp6_S_contig89:395329..400834- (Ectocarpus species6 EcLAC_371)
GTACGATGCTTGCCGCCGCCTCTCCGGCCTTCTTGCAATTCTCTCGCCGA
ACTCTCGCACGCTCCTTCCTCCCTTAGCTGGGTTTGCAAGACGTGCAGAA
GACTGTGTGCATTCCGCAGGAGGTCACGTTCTTCTCCGACAAGCCCCTCG
TTCAAGCAGCGGCAGGTGCGACGCAGACTGATTTCCTTCCCGCTTCGACC
CCTCAAGCAACCGAGCGGCGTCGTGCCTGGCTGCTGCCTCATCCTACTAC
TCCCATTCAATGCTGACTTGGTCGTTTTCTTGTCGGCCGCTGCGCTCGCT
TCTCGAGCCAAGCTTGTGCCGCTGAGCGGACCGCCTACGCAGAGTTTAAA
AAGAGTATCTAGAAAAAGATTAGGGAGGGGGCACGCAGACCCTATCCCTA
ACCTTAACCCTAACCCGAAGGCACTGATTCAATACTTTATCCCACACGTT
TTCTTAGCCAATTTTTCTGCGTAGACTACTACCCTGAGCCGCCTTTTTCT
CAGGGGATATGTACTTGTAGGGCCTTGGGGTGTGCTGGGGAGTCACGCCT
AGACTTGCTCAACCTTATTTCTCTCCTTTTTTTTTTTTTTTTTTCTGGCT
GTCCAGGCGACTTCCACATGGTGGCGCTGTCGCGGAAGAGAGAGGTGTTC
TCCTGGGGGTACGGGGCGGAGGGGCAGGGCGGACACGGGAGCCTGCTGCA
CATGCGCATGCCCCGTCGCGTGAGCTCGCTGCAGGAGGTGCCGGTGGCTC
AGGTATGTGTATGTGTGTGTGGGTTTCTCGCAGTAGCGTCGTCCGCGCTA
ACCAGCTGGCCAATGAAAAGGTGCCAAGTCAGTCTTTGTAGCGGCACAAC
AAACGCGAACACTTCTCTACAAATCGAACAGGGTAAGGATAAGGGTTGTC
TGCCGACAGAGGGGGCGCAGGAGTTTGCCGCTTGTGTGTGTGGGTGTGTG
TTTCTTGCATTCGCATCGACCGCGCGTGGTGTGAGTTTGGCTGATCAATG
ATACAGACGTTGTTGTACTGCTGTTGTGGGACGAAGAGACGCAAGCAACA
CGATTATCTAGTGCGTCGTGGGTGTGCGTGGCATTATTGTGCAACAGTCT
GCAGGAACCCTTCCCCCCCCCCCCCCCCCCGCACACGCCTATCCTGTTTC
CATCAAATGTCCAGTGTGTTGTGTTTTCGTCCTCTTCATTATGGCGACAG
TCCCCCCATTTTTTCGTGATGAGACGTGTACTGCATTTTTCAGCGTATGT
ACTACTCTACTCTTCAGTTTATTTTTTCGTTTTCGTACAACTGCAACCAT
CCAGGGTCACGCAGTCGACAATGTTTTATGTTGTGGCTATCATGCATGCT
TACCTGACGCACTTGGGGTACAGGTGGTGTGTGGGCCGTGGTGGAGCATG
GCTGTCACCGTAGACGGGTACTGCTACGCCTGGGGAAGCGCGGACGGCGG
GTGGACGGGGCTGACGCGGCCACCTGGTCTACGCGTGGTCGACCCGGGGC
CTTCGGCAGATAGGTTCGTATGGCCTTTTTTGTATGTTTGGCGACACCCA
GCGCAGCTGTTTGGCAGCAAGCAGTGGCATAGCTTGCGATCGTTTTCGTT
TGTTTGTTTTCTTTCTTTTTTTTTGGCACCCCTCTATCTATAAACGGCCA
TGGCTGATGTATGCAGCCGCCCAAATACGTGAATGCCGCCCCTGGCGAAG
TTTGGGCCTCCGTTGGAACAAGGTCAAGCTTTGCGATTGTTTCCGCCAAT
GAATTCCGCGCGGTGACTGTGCGGTGGCTTGTCTCTTTTCTCAGCAGGGG
TTTTCGTGGTGCACCTATAGAGGGACGGGAGGGAGGACAAGAAACTAAAC
CAGACCGACTGACCAACCAAACCTCTTTTGTCATCACGGTCTCACCACTC
CGCTTCCATGCCCCCCCCCTTCCCCCCCCCTCATCACATGCTTGACTTGA
CTTGACCCCAGAGCCGTGGAGACGCAGTCTTTCGACTCGACGCACAACAT
GCACGTCCCCGCGCTGGTGTACTCCCTGGCGCCGTACAAGGTTCTCCAGG
TCGGCTGCGGAGGCGGCCACACCCTGGTGGTGGCTAAGCGCCGGGCTCGC
CCGGTATCGCCAGGTGCGGCGACAAGAGGAAAATGTTATAGAGAAGGACC
CACAAAGGGAGATATTATCGGTGTATTCTGCTTTGGGAATCGTGGACGGA
CACACGCGTAAATAGTGCGTGCGCTAACGCTATAGATTATTGATTCATTT
CTAAATAGTTTGTTGAGTTTCCTGAGAGAGACCGAGAAAGCCCCCACCCG
CCGTTGCGAGAGGTCGAAGCGGCGCTGCCAGTGGTGGATGTCTGCCGTAA
TTGTTAGGTTGCCGCTCGGCGTTTGAGAAGCTGGCCGCCGCTTGACCAAC
ACGGTCGGTGTGTCATACAACACTTACGGGGGGAAAGCGGCTGCCCGTTG
TTTTACTCTGAGACCCTTCGTCGTGCCCCCCCCCCCGCGCACATGACGGT
CCCTCTCACAACAACCAACCAATCGTTTCCGTGACGAAAACAAAACCTCC
AGGGACGAACGGCGCGCCCGGTGCCGTTCCGACGGAGGTCCCGGGCGGCG
GCGGCGGCGGCGGCGGCGGCGGCGGTGGCGGCGGGGCCAAGGCGGCGTGC
CCCGAGTCGTCTCCGTTGATGTCATCGCTGTCGCCTCGCGTACCAAGCTC
CTCATCATCGAGGCGCTCGGCAGCAGCGGAAGCAGCGGCGGCGGTGGGGG
CAGGGTCTTCATCAGCGGCGAGAAACGTGTCGCTGTCCTCGGTAAAGCAC
GCCCGGCAGCAGGCGCAGGCCGCGCAGGCGGCGGCGGCGGCCGCGGGGGT
GGCGGACTCGGCGAGGAGGCGGAGAGCGCCCACGGGCCCGGACCTAACGG
CGTCGACGTCGGAGTCTGGCTGGGAGTCCGGAGCGGTGGACGAAGTCGCG
ACGGCCGCTGCCGTTGCCGCTTCGGTGGCTTCGGCCGCGTTTGCGGCCAC
CGGTGGGGGGAAGTGGGCGTCTACTTCGGGGGTGGCGGCGGCACCACCAA
AGCAGCGAGTGCAGCAGGGGAGACGCGCAAGCACCGGTGGCGGCGGCGGC
GCCGGGGAGAGGTTTGACGCCGCGAGGGTTAGGAGTCGAGCGAATAGTGT
TCCGGTCCCCGGGGGGGCAGGAGCGACGGCGGCTGCGGCTGCGGCTGCGG
CTGCGGCTGCGGCTGCGGCTGCTGCTGCGGCTGCTGCTGCGGCGGTGGGT
GTGGTGATCCCGCCGTCGCCGGAGAGCTTGCGGGAAGAGACCCTGTTGCC
GCCGCCGAAGGTTTCGAGACGCCGCCGAACGGGGTCGTCCTTGTCGCCAC
CCGGCGGCGGGGGGGTGGACGGGGGTGGGAAGGTGGTTAGCAAAGGAACC
AGCAGCAGTAGCAACGGTAGAGCATTGGACGGTGGAGGCGGCGGGGTGGT
GCGCCGGGCGGACGGGAGGCGGGCTTCGCCGGCCCATGGGGTCGCGCTCC
CCGCGGTGCCCGCCGCTAAGTCGGACGGGCTTCGGTCGGCGGCGGTAGCA
GCGGTGCCCCGTCGCCCGGAGTCTCCGGTGGCGGCGGCGGCGGCGGCGGC
GGCGGCCGGGCATGATGAAGCTCCCCCGGAGGTAACGCCGGGGGGACGGG
CGGGCGACAGGAAGTTTCTCTCCCTGCCCGGCGGTAGGGCTAGCCGGAGT
AGCAGTAGGACCGGAGACGGAGGCGGAGGAAGAAGACGCGACGAGTGCGC
CGGGAGAAGGAGAGGGGGAGTTGAGGGGCAGACGGGAAGCGCAAAAACGG
CGGCAGCGGCGGCGGCGGTGGGTGGCACCGGAGGTAGCGGGAGAGGCAGC
AGTGGTAGGCAGGGACAGGGAGCCGCAGGCGGGGGAGGGGCGGCGGTTAG
GTGTGAGGAAGAGTACGTGGCCAAGGTGTTCAGCTATTGCCGGCACGGGC
GGCTGGCGGAGGTCCAGGAGGCCCTCGGGTCGGGTTTCGACGTGTGCAGG
CGGAGGGACGAGAACGGGAACACGCTCCTGCACTGCGCGGCGCAGAACGG
GCTCCGCGGGATGTGCAAGTCGGTGCTGCAGGAGGGCAGGGGGCAGCCGC
TGAATGTCAAGAATGTGAGAGTTTTTTTCTTTTTGTAGCTCCTACTAGTA
CAGAGGTTGTAGTAGCGCCGTTTTGTTTTATGTTTTTTTTGCGGCCATCA
AACAGGAGGAGCGGAGACGTGTGTCGGGTCATGGTTTTCGGTTGCTGTCC
AAGGAACAACGCCGCTATCTATATCGCTGCCTGTGCTCAATCGTTCACAC
TGCTACAACTTTTTCTTTCACTTCAAATCAGCGCTCACAGCACTAGTGCC
GTTTTACTCCAACCCGTGGTCACACAGAAGAGCCCCTCTCTACCCTCCCC
TCTTGCGGTACTTTGCATTCGATTTTGAATGCGAGAAAAGTTCAGCACTC
TTTTCCCTCTGTGTACACACGAACTAGCGCTATCCACTAGGCCAGGAGCG
GAAGCGAGAGACAAACTCACTTTGCAAGGAAAGCTCGCTTACGCCGGGAT
TCGAACCCCTGACCTGACCTCTAGAAAGGTTTCGAGGACACCAACTAGAC
CACCGGGGCGACCGCGGGGCGACCGGCATAGAGATCTTTTTTTGTCCCAC
AATGAATCCGCGGCGCCATGCAAACGCGTATTTCGCTATGCCCGACGCTC
CTTGCTGCCTGAGTAGGTCGGTGCCCCCCCGTGATCTACAGAAAAATGAA
GCGATGATTTTTGCGGACCCTTGTTACAGAATTGTTACCCTCCGCCCCGC
CTCGCCGCTCTTCTCTGCTTGGCGTTTTTTCTGGGCTCTTTTACCACTTA
CTTGTGGGAATTTGTTTGGTGTTTTTGGAACGGGTTATTATTTCTGCGAA
AAATAAAACCCCACAAGAACCGCGGCAACACGGCGTTGCACTACGCCTTC
GCCTTCGGGTTCCAGCAGCTGGGGAAGTACCTCGCGTCCAAAGGAGCGGA
CGACAGCCTTCTCAACGACCAGGGGTGAGAAAGAGTTGGTCGATGCTTGT
TGCTTTCTCTTTGTTTCATTGTTTTGATTATCGGCGCGCTCACGTAACGC
AGCATTTGTGCCGTGCGAAAGGGGCGCTCCAATCCGTGGCGGTGACACGG
AAGGGTTGGCCCTTCTTCCCATGCACCCGGAGGTGGCGTAGACCTAAGAA
GCACACGGCCTGCACTCAAAGTTACTCTTTAGTATTTACGGCGTTTGCAA
TATACGAGGGAAGATCAGTTTTTTTTTTTTTTTTGCTGAAAGCCAAGCCG
TGAATGTAAAAAAAAAGCACAACCAAATAATGGAAAATATTAATCATCAC
GCCCGCTTACATGCCAAACACGCCTTCTCCTTCTCCCTTGGGTGTGTGAA
GGTTGACGTGCTACGAGGGGCTGGAACGCCAAGACCTAGAGTCGTTGTGA
CCGCGGCGGACACAAGCCAACAGCGGGGGGGGTGGCCCGGTCCGCTCTCA
GGACAC
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Coding sequence (CDS) from alignment at Ecto-sp6_S_contig89:395329..400834-

>mRNA_Ecto-sp6_S_contig89.17944.1 ID=mRNA_Ecto-sp6_S_contig89.17944.1|Name=mRNA_Ecto-sp6_S_contig89.17944.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=2145bp|location=Sequence derived from alignment at Ecto-sp6_S_contig89:395329..400834- (Ectocarpus species6 EcLAC_371)
ATGGTGGCGCTGTCGCGGAAGAGAGAGGTGTTCTCCTGGGGGTACGGGGC
GGAGGGGCAGGGCGGACACGGGAGCCTGCTGCACATGCGCATGCCCCGTC
GCGTGAGCTCGCTGCAGGAGGTGCCGGTGGCTCAGGTGGTGTGTGGGCCG
TGGTGGAGCATGGCTGTCACCGTAGACGGGTACTGCTACGCCTGGGGAAG
CGCGGACGGCGGGTGGACGGGGCTGACGCGGCCACCTGGTCTACGCGTGG
TCGACCCGGGGCCTTCGGCAGATAGAGCCGTGGAGACGCAGTCTTTCGAC
TCGACGCACAACATGCACGTCCCCGCGCTGGTGTACTCCCTGGCGCCGTA
CAAGGTTCTCCAGGTCGGCTGCGGAGGCGGCCACACCCTGGTGGTGGCTA
AGCGCCGGGCTCGCCCGGTATCGCCAGGGACGAACGGCGCGCCCGGTGCC
GTTCCGACGGAGGTCCCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGG
TGGCGGCGGGGCCAAGGCGGCGTGCCCCGAGTCGTCTCCGTTGATGTCAT
CGCTGTCGCCTCGCGTACCAAGCTCCTCATCATCGAGGCGCTCGGCAGCA
GCGGAAGCAGCGGCGGCGGTGGGGGCAGGGTCTTCATCAGCGGCGAGAAA
CGTGTCGCTGTCCTCGGTAAAGCACGCCCGGCAGCAGGCGCAGGCCGCGC
AGGCGGCGGCGGCGGCCGCGGGGGTGGCGGACTCGGCGAGGAGGCGGAGA
GCGCCCACGGGCCCGGACCTAACGGCGTCGACGTCGGAGTCTGGCTGGGA
GTCCGGAGCGGTGGACGAAGTCGCGACGGCCGCTGCCGTTGCCGCTTCGG
TGGCTTCGGCCGCGTTTGCGGCCACCGGTGGGGGGAAGTGGGCGTCTACT
TCGGGGGTGGCGGCGGCACCACCAAAGCAGCGAGTGCAGCAGGGGAGACG
CGCAAGCACCGGTGGCGGCGGCGGCGCCGGGGAGAGGTTTGACGCCGCGA
GGGTTAGGAGTCGAGCGAATAGTGTTCCGGTCCCCGGGGGGGCAGGAGCG
ACGGCGGCTGCGGCTGCGGCTGCGGCTGCGGCTGCGGCTGCGGCTGCTGC
TGCGGCTGCTGCTGCGGCGGTGGGTGTGGTGATCCCGCCGTCGCCGGAGA
GCTTGCGGGAAGAGACCCTGTTGCCGCCGCCGAAGGTTTCGAGACGCCGC
CGAACGGGGTCGTCCTTGTCGCCACCCGGCGGCGGGGGGGTGGACGGGGG
TGGGAAGGTGGTTAGCAAAGGAACCAGCAGCAGTAGCAACGGTAGAGCAT
TGGACGGTGGAGGCGGCGGGGTGGTGCGCCGGGCGGACGGGAGGCGGGCT
TCGCCGGCCCATGGGGTCGCGCTCCCCGCGGTGCCCGCCGCTAAGTCGGA
CGGGCTTCGGTCGGCGGCGGTAGCAGCGGTGCCCCGTCGCCCGGAGTCTC
CGGTGGCGGCGGCGGCGGCGGCGGCGGCGGCCGGGCATGATGAAGCTCCC
CCGGAGGTAACGCCGGGGGGACGGGCGGGCGACAGGAAGTTTCTCTCCCT
GCCCGGCGGTAGGGCTAGCCGGAGTAGCAGTAGGACCGGAGACGGAGGCG
GAGGAAGAAGACGCGACGAGTGCGCCGGGAGAAGGAGAGGGGGAGTTGAG
GGGCAGACGGGAAGCGCAAAAACGGCGGCAGCGGCGGCGGCGGTGGGTGG
CACCGGAGGTAGCGGGAGAGGCAGCAGTGGTAGGCAGGGACAGGGAGCCG
CAGGCGGGGGAGGGGCGGCGGTTAGGTGTGAGGAAGAGTACGTGGCCAAG
GTGTTCAGCTATTGCCGGCACGGGCGGCTGGCGGAGGTCCAGGAGGCCCT
CGGGTCGGGTTTCGACGTGTGCAGGCGGAGGGACGAGAACGGGAACACGC
TCCTGCACTGCGCGGCGCAGAACGGGCTCCGCGGGATGTGCAAGTCGGTG
CTGCAGGAGGGCAGGGGGCAGCCGCTGAATGTCAAGAATAACCGCGGCAA
CACGGCGTTGCACTACGCCTTCGCCTTCGGGTTCCAGCAGCTGGGGAAGT
ACCTCGCGTCCAAAGGAGCGGACGACAGCCTTCTCAACGACCAGGGGTTG
ACGTGCTACGAGGGGCTGGAACGCCAAGACCTAGAGTCGTTGTGA
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