mRNA_Ecto-sp6_S_contig89.17941.1 (mRNA) Ectocarpus species6 EcLAC_371

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp6_S_contig89.17941.1
Unique NamemRNA_Ecto-sp6_S_contig89.17941.1
TypemRNA
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Homology
[Close]
BLAST of mRNA_Ecto-sp6_S_contig89.17941.1 vs. uniprot
Match: A0A6H5JDN4_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDN4_9PHAE)

HSP 1 Score: 1000 bits (2586), Expect = 0.000e+0
Identity = 637/762 (83.60%), Postives = 653/762 (85.70%), Query Frame = 1 
Query:   97 RSDSVDTILLTPAPTVVSTASVPATMERRGSRARRRMLAVDIAAAEASGNNGSFGVKQNEREQDDPPVIDTTSVEVERKADGSVAKVNEYVVVRDLGRGSSAEVKLCRLLMPPDRVIDNRHTNDNGMSATRESIADTVGGGXXEESRSGSSGSGIEGQRRRRASGDTYKERVEGQEGRQDHERXXXXDELDGGDLY----------------------AVKIFDRAELMRRGARFARPRARGPDGALLPAKATPDNYIKVQREIAIMKKLVHPSVVQLVEVIDAPRDGSLYMVMEYVERGAVMRCVEQEMGRYECSPSVSEGGCLDARTAARYFADVLAGLEYLHLQLIAHRDLKPENVLIGNDDRAKIADFGVSQYFHDDEPRTPKSARSLARSTSRAQMSSTEGTWCFWSPEMCGERGEGAAFNAYASDAWAAGVTLWCLLYGTVPFFSLNPMDLFTSIAQDPAPVPDGADTTLKDLLNRLLTKDPGKRLTVPEARDHCWVQPPRPGERCGDRGEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------GVAFLREALLAKSSFSSSLSPSALLAADDSRFGAXXXXXXXXXXXXXXHGD----VGDGGGGXXXEXXXXXXXGP----------KTAGRWADSARERVAVSDADVRAAVTEAPGFVLVAKKIKGKVDGMKVKVRRLSSELGGATVASLSGVKGRNKTRKKSRNXXXXXXXXXXXADAGDKGAPEEQHSFSSLSGRDQR 2256
            RSDSVDTILLTPAPTVVSTASVPATMERRGSRARRRMLAV  AAAEA  NNGS GV+QNEREQDDPPVIDTTSVEVERKADGSV KVNEYVVVRDLGRGSSAEVKLCRLLMPPDRV DN+HT+D G+SA RESI DTVGGGXX ESRSGSSG G EG+RR RAS  TYKERVEGQEG QDH R    D LDGGDLY                      AVKIFDRAELMRRGARFARPRARGPDGALLPAKAT DNYIKVQREIAIMKKLVHP+VVQLVEVIDAPRD SLYMVMEYVERGAVM CVEQ MGRYECSPSV+EG CLDARTAARYF+DVLAGLEYLHLQLIAHRDLKPENVLIGNDDRAKIADFGVSQYF+DDEPRTPKSARSLARSTSRAQMSSTEGTWCFWSPEMCGE GEGAAFNAYASDAWAAGVTLWCLLYGTVPFFSLNPMDLFTSIAQDPAPVPDGADT LKDLLNRLLTKDPGKRLTVPEARDH W+QPPRPGERCGDRG D  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      GVAFLR ALL  SSFSSSLSPSALLAADDSRF A XXXXXXXXXXXXX       V D    XXX XXXXXXX            KT GRWADSARERVAVSD DVRAAVTEAPGFVLV+KKIKGKVDGMKVK RRLSSELGGATVASL+GVK RNKTR     XXXXXXXX     A ++GAPE +HSF+SLSGRD R
Sbjct:   23 RSDSVDTILLTPAPTVVSTASVPATMERRGSRARRRMLAVGTAAAEAPSNNGSLGVEQNEREQDDPPVIDTTSVEVERKADGSVTKVNEYVVVRDLGRGSSAEVKLCRLLMPPDRVFDNQHTSDIGLSANRESIVDTVGGGXXXESRSGSSGFGGEGRRRHRASAGTYKERVEGQEGGQDHGRDQERDGLDGGDLYVCSGGEACVGVENVDVRDTPLVAVKIFDRAELMRRGARFARPRARGPDGALLPAKATSDNYIKVQREIAIMKKLVHPNVVQLVEVIDAPRDRSLYMVMEYVERGAVMYCVEQGMGRYECSPSVNEGSCLDARTAARYFSDVLAGLEYLHLQLIAHRDLKPENVLIGNDDRAKIADFGVSQYFNDDEPRTPKSARSLARSTSRAQMSSTEGTWCFWSPEMCGEWGEGAAFNAYASDAWAAGVTLWCLLYGTVPFFSLNPMDLFTSIAQDPAPVPDGADTPLKDLLNRLLTKDPGKRLTVPEARDHRWLQPPRPGERCGDRGGDGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRIGGVAFLRGALLKNSSFSSSLSPSALLAADDSRFIAAXXXXXXXXXXXXXXXXXXXXVSDXXXXXXXXXXXXXXXXXXXXXXXXXXSKTTGRWADSARERVAVSDEDVRAAVTEAPGFVLVSKKIKGKVDGMKVKARRLSSELGGATVASLAGVKRRNKTRXXXXXXXXXXXXXAADGAACNRGAPEVKHSFTSLSGRDPR 784
[Close]
BLAST of mRNA_Ecto-sp6_S_contig89.17941.1 vs. uniprot
Match: D8LKE4_ECTSI (Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKE4_ECTSI)

HSP 1 Score: 998 bits (2580), Expect = 0.000e+0
Identity = 652/744 (87.63%), Postives = 656/744 (88.17%), Query Frame = 1 
Query:  172 MERRGSRARRRMLAVDIAAAEASGNNGSFGVKQNEREQDDPPVIDTTSVEVERKADGSVAKVNEYVVVRDLGRGSSAEVKLCRLLMPPDRVIDNRHTNDNGMSATRESIADTVGGGXXEESRSGSSGSGIEGQRRRRASGDTYKERVEGQEGRQDHERXXXXDELDGGDLYAVKIFDRAELMRRGARFARPRARGPDGALLPAKATPDNYIKVQREIAIMKKLVHPSVVQLVEVIDAPRDGSLYMVMEYVERGAVMRCVEQEMGRYECSPSVSEGGCLDARTAARYFADVLAGLEYLHLQLIAHRDLKPENVLIGNDDRAKIADFGVSQYFHDDEPRTPKSARSLARSTSRAQMSSTEGTWCFWSPEMCGERGEGAAFNAYASDAWAAGVTLWCLLYGTVPFFSLNPMDLFTSIAQDPAPVPDGADTTLKDLLNRLLTKDPGKRLTVPEARDHCWVQPPRPGERCGDRGEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVAFLREALLAKSSFSSSLSPSALLAADDSRFGAXXXXXXXXXXXXXXHGDVGDGGGGXXXEXXXXXXXGPKTAGRWADSARERVAVSDADVRAAVTEAPGFVLVAKKIKGKVDGMKVKVRRLSSELGGATVASLSGVKGRNKTRKKSRNXXXXXXXXXXXADAGDKGAPEEQHSFSSLSGRDQRXXXXXXXXXXXXXXXXXXXXXXQ------ESVGPHLARPRASSAACVIS 2385
            MERRGSRARRRMLAVDIAAAEASGNN SFGVKQNEREQDDPPVIDTTSVEVERKADGSVAKVNEYVVVRDLGRGSSAEVKLCRLLMPPDRVIDNRHTNDNG+SATRESIADTVGGGXX                   A GDTYKERVE QEG QDH R    DELDGGDLYAVKIFDRAELMRRGARFARPRARGPDGALLPAKATP+NYIKVQREIAIMKKLVHP+VVQLVEVIDAPRD SLYMVMEYVERGAVM CVEQEMGRYECSPSVSEGGCLDARTAARYFADVLAGLEYLHLQLIAHRDLKPENVLIGNDDRAKIADFGVSQYFHDDEPRT KSARSLARSTSRAQMSSTEGTWCFWSPEMCGERGEGAAFNAYASDAWAAGVTLWCLLYGTVPFFSLNPMDLFTSIAQDPAPVPDGAD TLKDLLNRLLTKDPGKRLTVPEARDHCWVQPPRPGERCGDRGEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    VAFLR ALLAKSSFSSSLSPSALLAADDSRFGA XXXXXXXXXXXXX            X XXXXXXX  KTAG W DSARERVAVSDADVRAAVTEAPGFVLVAKKIKGKVDGMKVK RRLSSELGGATVASL+GVKGRNKTRKKSR XXXXXXXXXXX                        XXXXXXXXXXXXXXXXXXXXXX       ESVGPHLARPRASSAACVIS
Sbjct:    1 MERRGSRARRRMLAVDIAAAEASGNNSSFGVKQNEREQDDPPVIDTTSVEVERKADGSVAKVNEYVVVRDLGRGSSAEVKLCRLLMPPDRVIDNRHTNDNGLSATRESIADTVGGGXXXXXXXXXXXXXXXXXXXXXARGDTYKERVERQEGGQDHGRDQERDELDGGDLYAVKIFDRAELMRRGARFARPRARGPDGALLPAKATPENYIKVQREIAIMKKLVHPNVVQLVEVIDAPRDRSLYMVMEYVERGAVMCCVEQEMGRYECSPSVSEGGCLDARTAARYFADVLAGLEYLHLQLIAHRDLKPENVLIGNDDRAKIADFGVSQYFHDDEPRTLKSARSLARSTSRAQMSSTEGTWCFWSPEMCGERGEGAAFNAYASDAWAAGVTLWCLLYGTVPFFSLNPMDLFTSIAQDPAPVPDGADMTLKDLLNRLLTKDPGKRLTVPEARDHCWVQPPRPGERCGDRGEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---SVAFLRGALLAKSSFSSSLSPSALLAADDSRFGAAXXXXXXXXXXXXXX-----------XXXXXXXXXXSKTAGPWGDSARERVAVSDADVRAAVTEAPGFVLVAKKIKGKVDGMKVKARRLSSELGGATVASLAGVKGRNKTRKKSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESVGPHLARPRASSAACVIS 730
[Close]
BLAST of mRNA_Ecto-sp6_S_contig89.17941.1 vs. uniprot
Match: A0A4D9D4E9_9STRA (Protein kinase domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D4E9_9STRA)

HSP 1 Score: 233 bits (593), Expect = 9.650e-62
Identity = 172/466 (36.91%), Postives = 231/466 (49.57%), Query Frame = 1 
Query:  304 DTTSVEVERKADGSVAKVNEYVVVRDLGRGSSAEVKLCRLLMP--PDRVIDNRHTNDNGMSATRESIADTVGGGXXEESRSGSSGSGIEGQRRRRASGDTYKERVEGQEGRQDHERXXXXDE---LDGGDLYAVKIFDRAELMRRGARFARPRARGPDGALLPAKATPDNYIKVQREIAIMKKLVHPSVVQLVEVIDAPRDGSLYMVMEYVERGAVMRCVEQEMGRYECSPSVSEGGCLDARTAARYFADVLAGLEYLHLQLIAHRDLKPENVLIGNDDRAKIADFGVSQYFH---------DDEPRTPKSARSLA-------------------RSTSRAQMSSTEGTWCFWSPEMCGERGEGAAFNAYASDAWAAGVTLWCLLYGTVPFFSLNPMDLFTSIAQDPAPVP---DGADTTLKDLLNRLLTKDPGKRLTVPEARDHCWVQPPRPGERCGDR---GED 1584
            DT +  + +   G +  VN+Y ++++LGRG+ AEVKLC+   P  PD    +  T   G       ++ T       E  S S   G+                   +E R         DE    D  DLYA+K+F ++ L+RR   F R R    +G +    +   +  KVQREIAIMKKL+HP +V L EVID     +LY+V+EYV  G +M   + E  RY C+ S    G L+   AAR  +D+LAGL YLH+  IAHRDLKPENVL+G   R KIADFGV+ YF          DD+     S   LA                   RS+SR  +  ++GTW FW+PEMC +   GA F+ Y+ D WAAGV LW  ++G +PF   +P  LF +I       P       + ++DLL   L K P +R+TV +A DH WVQ     E  G R   GED
Sbjct:    4 DTKTAAITKDELGGLMNVNQYAIIKELGRGAFAEVKLCKRQYPSIPDPTFQSMAT---GSGEYHSLVSGTGSPKARREEASPSPPRGVS---------------PTSEESRSYTPSPIPMDEEADKDAKDLYAIKVFSKSLLLRR-KNFGRNR----EGRM----SLTTDLDKVQREIAIMKKLIHPHLVSLYEVIDDASQDALYLVLEYVPGGPIMD-FDAEERRYVCTRSSDGMGVLNEVHAARVLSDMLAGLVYLHVHHIAHRDLKPENVLVGRGGRCKIADFGVAHYFEEEAARILALDDQAGAGASREGLATGTTSPSVSSHEHQLHYLYRSSSRGLLHKSDGTWSFWAPEMCEQ---GATFSGYSCDVWAAGVCLWAFMFGKLPFQEDSPEVLFEAIRDKELDFPLEERQVSSEVQDLLQSFLQKLPRERITVGQALDHPWVQLADEEEEHGTRAGKGED 438
[Close]
BLAST of mRNA_Ecto-sp6_S_contig89.17941.1 vs. uniprot
Match: A0A7S3Y6M6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6M6_HETAK)

HSP 1 Score: 209 bits (533), Expect = 1.280e-56
Identity = 115/246 (46.75%), Postives = 156/246 (63.41%), Query Frame = 1 
Query:  805 KVQREIAIMKKLVHPSVVQLVEVIDAPRDGSLYMVMEYVERGAVMRCVEQEMGRYECSPSVSEGGCLDARTAARYFADVLAGLEYLHLQLIAHRDLKPENVLIGNDDRAKIADFGVSQYFHDDEPRTPKSARSLARSTSRAQMSSTEGTWCFWSPEMCGERGEGAAFNAYASDAWAAGVTLWCLLYGTVPFFSLNPMDLFTSIAQDPAPVPDGADTT--LKDLLNRLLTKDPGKRLTVPEARDHCW 1536
            KVQ+EIAIMKKL HP++VQ+ EVID P    L+MV+EYV  G VM   E     Y    S   GG      AA +  D+ AG++YLH   I HRDLKPEN+L+ + +R KIADFGVS YF  DE ++P+  R L RS SR Q+ +TEGTW FW+PEMC + G G  ++ YA+D W+ GV LW +L+G +PF +  P +LF +IA  P  VP     +  +K++L+ LL KDP +R+ + +  +  W
Sbjct:    9 KVQQEIAIMKKLCHPNLVQMFEVIDDPDGDQLFMVLEYVPNGIVMEWDETADAFY----SRFTGGVYTEEQAAGHMMDICAGMQYLHQNHICHRDLKPENILLSSQNRCKIADFGVSHYFEQDEQKSPR--RDLYRSESRGQLKNTEGTWSFWAPEMC-QPGHGN-YSGYAADMWSMGVVLWVMLFGKLPFSAETPPELFAAIAAAPHEVPADKHPSEEVKEVLDGLLKKDPRERIGLGDLSNSRW 246
[Close]
BLAST of mRNA_Ecto-sp6_S_contig89.17941.1 vs. uniprot
Match: A0A7S4E3P3_9STRA (Hypothetical protein n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E3P3_9STRA)

HSP 1 Score: 201 bits (512), Expect = 1.210e-53
Identity = 119/288 (41.32%), Postives = 177/288 (61.46%), Query Frame = 1 
Query:  685 AVKIFDRAELMRRGARFARPRARGPDGALLPAKATPDNYIKVQREIAIMKKLVHPSVVQLVEVIDAPRDGSLYMVMEYVERGAVMRCVEQEMGRYECSPSVSEGGCLDARTAARYFADVLAGLEYLHLQLIAHRDLKPENVLIGNDDRAKIADFGVSQYFHDDEPRTPK-SARSLARSTSRAQMSSTEGTWCFWSPEMC-GERGEGAAFNAYASDAWAAGVTLWCLLYGTVPFFSLNPMDLFTSIAQDPAPVPDGADTTLKDLLNRLLTKDPGKRLTVPEARDHCWVQ 1542
            A K+FD++ L R+     R  +R  +G  + ++       KV +EI IMKKLVHP++V+L+EVID  +D  L+++ME+VE G VM+  ++E  ++    S   GG  + R A +Y  D+ +GL YLHL  IAHRDLKP+NVL+G   R KIADFGV+ YF +D       S RSL RS SRAQ+  T+GT+CFW+PEM  G++     FNAY+ D WAAGV  +  + G +PF++ +P+++F  IAQ    +P+      + ++  LL  +   RLTV + +   W++
Sbjct:   52 AAKVFDKSLLRRK-----RTISRTVEGFKIHSELD-----KVDKEIGIMKKLVHPNLVRLLEVIDDKKDNQLFLLMEFVELGPVMK-YDRETNKFT---STVTGGLCEERLAGQYLLDIASGLGYLHLHHIAHRDLKPDNVLLGKLGRCKIADFGVAHYFEEDHANDKTLSVRSLERSHSRAQIRDTQGTYCFWAPEMIQGDK----KFNAYSCDMWAAGVCYFIFVTGKLPFYAESPVEMFDFIAQASPVIPNTLSNHSRRVIFGLLATNIDTRLTVQDLQSDPWLK 321
[Close]
BLAST of mRNA_Ecto-sp6_S_contig89.17941.1 vs. uniprot
Match: A0A1E7FT08_9STRA (Kinase-like protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FT08_9STRA)

HSP 1 Score: 191 bits (486), Expect = 1.420e-51
Identity = 124/293 (42.32%), Postives = 157/293 (53.58%), Query Frame = 1 
Query:  679 LYAVKIFDRAELMRRGARFARPRARGPDGALLPAKATPDNYIKVQREIAIMKKLVHPSVVQLVEVIDAPRDGSLYMVMEYVERGAVMRCVEQEMGRYECSPSVSE-------GGCLDARTAARYFADVLAGLEYLHLQLIAHRDLKPENVLIGNDDRAKIADFGVSQYFHDDEPRTPKSARSLARSTSRAQMSSTEGTWCFWSPEMC-GERGEGAAFNAYASDAWAAGVTLWCLLYGTVPFFSLNPMDLFTSIAQDPAPVPD-GADTTLKDLLNRLLTKDPGKRLTVPEARDH 1530
            L AVKI  ++ L RR       R    D      K   + Y +VQREIA+MKKL HP++VQL EVID+P    LYMV+EY+  G ++   ++    ++ S S+          G  D   AA YF D+L GL YLH   I HRDLKPEN+L+ N   AKI DFGVS  F ++    P+                TEGTWCFWSPEMC G RG    F+ YA+D WAAG+ L+  + G +PF+S  P+DLF  IA+      D G   TL DLL   L KDP  R  V +   H
Sbjct:    2 LVAVKILSKSNLKRR-------RTIERDRNTKSVKIR-NAYQQVQREIALMKKLSHPNLVQLYEVIDSPETDILYMVLEYMPLGEILT-YQENTATFKRSESLRHKKIDGLFNGHFDEEHAALYFVDILHGLAYLHQHHICHRDLKPENILLSNRKIAKIGDFGVSHIFEEESENGPRRM--------------TEGTWCFWSPEMCNGSRG----FSLYAADIWAAGICLYIFVTGKLPFYSTVPLDLFEMIAKTEIQYSDLGLSDTLIDLLKCCLEKDPNCRAGVGDCLHH 267
[Close]
BLAST of mRNA_Ecto-sp6_S_contig89.17941.1 vs. uniprot
Match: A0A7R9U356_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U356_9STRA)

HSP 1 Score: 196 bits (499), Expect = 2.370e-50
Identity = 120/290 (41.38%), Postives = 162/290 (55.86%), Query Frame = 1 
Query:  682 YAVKIFDRAELMRRGARFARPRARGPDGALLPAKATPDNYIKVQREIAIMKKLVHPSVVQLVEVIDAPRDGSLYMVMEYVERGAVMRCVEQEMGRYECSPSVSEGGCLDARTAARYFADVLAGLEYLHLQLIAHRDLKPENVLIGNDDRAKIADFGVSQYFHDDEPRTPKSARSLARSTSRAQMSSTEGTWCFWSPEMCGERGEGAAFNAYASDAWAAGVTLWCLLYGTVPF-FSLNPMDLFTSIAQ---DPAPVPDGADTTLKDLLNRLLTKDPGKRLTVPEARDHCWV 1539
            YA K+  ++ L+RR     R       G     K   DN   V RE+A+MKKL HP +V LVEVID      + M+ME +  G +M   +QE  R+   P+    G L    AA     VL G+ YLH   +AHRDLKPEN+L  +D R KI+DFGVS +F ++  +  +  R+L R  SR Q++ TEGTW FW+PEMC    +   ++AYA+D WAAGV LW  ++GT+PF  S  P DLF  I +   +    P      L D + RLL KDP  R++VP+A  H W+
Sbjct:  114 YAAKVMHKS-LLRRRRNIERK------GRKTVVKTALDN---VAREVALMKKLEHPCIVDLVEVIDDVESDLIVMIMELMGNGPIMDYSDQEQ-RFVYQPTQ---GTLPEEDAAWTIKAVLLGIGYLHQNHVAHRDLKPENILRSSDGRVKISDFGVSHFFEEETAKERRPLRTLIRQESRGQLTKTEGTWAFWAPEMCTSTRK-PQWSAYAADLWAAGVCLWVFIFGTLPFDASGGPTDLFDMIERYDDEHVDFPHEVSPDLADFIKRLLRKDPKDRMSVPDALAHRWI 388
[Close]
BLAST of mRNA_Ecto-sp6_S_contig89.17941.1 vs. uniprot
Match: A0A7S2CYB8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CYB8_9STRA)

HSP 1 Score: 186 bits (473), Expect = 1.910e-48
Identity = 98/244 (40.16%), Postives = 148/244 (60.66%), Query Frame = 1 
Query:  805 KVQREIAIMKKLVHPSVVQLVEVIDAPRDGSLYMVMEYVERGAVMRCVEQEMGRYECSPSVSEGGCLDARTAARYFADVLAGLEYLHLQLIAHRDLKPENVLIGNDDRAKIADFGVSQYFHDDEPRTPKSARSLARSTSRAQMSSTEGTWCFWSPEMCGERGEGAAFNAYASDAWAAGVTLWCLLYGTVPFFSLNPMDLFTSIAQDPAPVPDGADTTLKDLLNRLLTKDPGKRLTVPEARDHCW 1536
            +V  E+AIMKKL HP++V L EVID   +  ++MV+++VE G +M   ++  G++    + +EGG      AA+   DV++GL YLH+  IAHRDLKPEN+L+G+D   KIADFGVS +F  ++     +           Q++ TEGT+ F++PEMC +      FNAYA D WA G+ +W +++GT+PF   NP++LF  I       P      L+D+++  L KDP  R+T+ +A +H W
Sbjct:    2 QVAGEVAIMKKLRHPNLVALHEVIDDHDESMMFMVLDFVEGGELMSW-DESAGKF----TSNEGGLFTEARAAKATQDVISGLAYLHMNHIAHRDLKPENLLVGSDGEIKIADFGVSHFFEQEDKTDDATMEKEIEKV--GQLTKTEGTYYFFAPEMCTK----GPFNAYACDVWALGICVWAMVFGTLPFKGGNPVELFDLIQTQEIQFPSQMSPELQDIIHAFLDKDPADRITLDDASEHVW 234
[Close]
BLAST of mRNA_Ecto-sp6_S_contig89.17941.1 vs. uniprot
Match: M1W765_CLAP2 (Related to calcium/calmodulin dependent protein kinase C n=1 Tax=Claviceps purpurea (strain 20.1) TaxID=1111077 RepID=M1W765_CLAP2)

HSP 1 Score: 191 bits (484), Expect = 1.180e-47
Identity = 118/311 (37.94%), Postives = 171/311 (54.98%), Query Frame = 1 
Query:  673 GDLYAVKIFDRAELMRR--------GARFARPR------ARGPDGALLP------AKATPDNYIKVQREIAIMKKLVHPSVVQLVEVIDAPRDGSLYMVMEYVERGAVMRCVEQEMGRYECSPSVSEGGCLDARTAARY-FADVLAGLEYLHLQLIAHRDLKPENVLIGNDDRAKIADFGVSQYFH-DDEPRTPKSARSLARSTSRAQMSSTEGTWCFWSPEMCGERGEGAAFNAYASDAWAAGVTLWCLLYGTVPFFSLNPMDLFTSIAQDPAPVPDGADTTLKDLLNRLLTKDPGKRLTVPEARDHCWV 1539
            G+ +AVK F +A L +R        G   + PR       R P G L P      A    D    ++ EIAIMKKL HP++VQL+EV+D P + SLYMVM+  ++G +M      +G  +C+   S+  C       RY F D++ G+EYLH Q + HRD+KP+N+L+ +D+  KIADFGVS+ F   D  R  KSA S A                F  PE+CG+  +    +  A+D W+ GVTL+CL YG +PF     ++++ ++  D   +P+G D    DL+ R+L KDP +R+T+PE R+H WV
Sbjct:  129 GNEFAVKEFSKARLRKRAQSNILRLGPHASSPRHLLPRPRRAPGGPLSPQLTGLRAGEQNDALFLIREEIAIMKKLNHPNLVQLIEVLDDPEEDSLYMVMDMCKKGVIM-----SVGLDKCADPYSDESC-------RYWFRDLVLGIEYLHAQGVIHRDIKPDNLLLSDDEVLKIADFGVSEMFDKSDSMRVSKSAGSPA----------------FMPPELCGKYQQ---VSGKAADIWSMGVTLYCLKYGKIPFNRAGVLEIYEAVKSDAPVLPEGEDADFADLMGRILEKDPERRITMPELREHPWV 408
[Close]
BLAST of mRNA_Ecto-sp6_S_contig89.17941.1 vs. uniprot
Match: A0A6J1SZ08_FRAOC (calcium/calmodulin-dependent protein kinase kinase 2 n=1 Tax=Frankliniella occidentalis TaxID=133901 RepID=A0A6J1SZ08_FRAOC)

HSP 1 Score: 181 bits (460), Expect = 2.090e-47
Identity = 114/289 (39.45%), Postives = 156/289 (53.98%), Query Frame = 1 
Query:  688 VKIFDRAELMRRGARFARPRARGPDGALLPA--KATPDNYI-KVQREIAIMKKLVHPSVVQLVEVIDAPRDGSLYMVMEYVERGAVMRCVEQEMGRYECSPSVSEGGCLDARTAARYFADVLAGLEYLHLQLIAHRDLKPENVLIGNDDRAKIADFGVSQYFHDDEPRTPKSARSLARSTSRAQMSSTEGTWCFWSPEMCGERGEGAAFNAYASDAWAAGVTLWCLLYGTVPFFSLNPMDLFTSIAQDPAPVPD--GADTTLKDLLNRLLTKDPGKRLTVPEARDHCWV 1539
            +KI  + +LM++   F         G + P+  KA P N + ++ REIAI+KKL HP+VV+LVEV+D P +  LY+V E +ERG V+R              V     L    A +YF DV+ G+EYLH Q I HRD+KP N+L+G D R +IAD GV   FH  +                A +SST GT  F +PE    R     F+  A D W+ GVTL+ L++G VPF   N + L+  I  +    PD       LKDL++RLL KDP  R+T+PE ++H WV
Sbjct:    1 MKILSKKKLMKKAGIF---------GRIAPSRGKAAPANPLDRIYREIAILKKLDHPNVVKLVEVLDDPEEDHLYLVFELLERGEVLR--------------VPTDTPLSEAQARQYFRDVVMGIEYLHYQRIIHRDIKPANLLLGEDGRVQIADLGVCNEFHGQD----------------AFLSSTAGTPAFTAPEALNSR----QFSGKACDLWSMGVTLFSLVFGDVPFLDDNVLTLYHKIKTETVRFPDRPAISEPLKDLISRLLLKDPAARITLPEVKEHPWV 246
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig89.17941.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JDN4_9PHAE0.000e+083.60Protein kinase domain-containing protein n=1 Tax=E... [more]
D8LKE4_ECTSI0.000e+087.63Ca2+/calmodulin-dependent protein kinase kinase be... [more]
A0A4D9D4E9_9STRA9.650e-6236.91Protein kinase domain-containing protein n=3 Tax=M... [more]
A0A7S3Y6M6_HETAK1.280e-5646.75Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S4E3P3_9STRA1.210e-5341.32Hypothetical protein n=3 Tax=Pelagomonas calceolat... [more]
A0A1E7FT08_9STRA1.420e-5142.32Kinase-like protein (Fragment) n=1 Tax=Fragilariop... [more]
A0A7R9U356_9STRA2.370e-5041.38Hypothetical protein n=2 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2CYB8_9STRA1.910e-4840.16Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
M1W765_CLAP21.180e-4737.94Related to calcium/calmodulin dependent protein ki... [more]
A0A6J1SZ08_FRAOC2.090e-4739.45calcium/calmodulin-dependent protein kinase kinase... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig89contigEcto-sp6_S_contig89:370677..381360 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score200.3
Seed ortholog evalue3.4e-48
Seed eggNOG ortholog44056.XP_009037349.1
Preferred nameTIF35
Model size2621
KEGG koko:K03248,ko:K05666,ko:K07359,ko:K20304
KEGG TC3.A.1.208.2
KEGG Pathwayko01523,ko01524,ko02010,ko03013,ko04140,ko04152,ko04211,ko04920,ko04921,ko04976,ko05034,map01523,map01524,map02010,map03013,map04140,map04152,map04211,map04920,map04921,map04976,map05034
Hectar predicted targeting categoryother localisation
GOsGO:0001732,GO:0002181,GO:0002183,GO:0002188,GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005852,GO:0006412,GO:0006413,GO:0006415,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0010494,GO:0016043,GO:0016282,GO:0019538,GO:0022411,GO:0022607,GO:0022613,GO:0022618,GO:0032984,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0035770,GO:0036464,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043614,GO:0043624,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070993,GO:0071540,GO:0071541,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
Exons11
EggNOG free text desc.translation initiation factor activity
EggNOG OGsKOG0122@1,KOG0122@2759,KOG0585@1,KOG0585@2759
Ec32 ortholog descriptionCa2 /calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases
Ec32 orthologEc-16_002680.1
EC2.7.11.17
Cds size2388
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001,ko02000,ko03012,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig89.17941.1prot_Ecto-sp6_S_contig89.17941.1Ectocarpus species6 EcLAC_371polypeptideEcto-sp6_S_contig89 370677..381127 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350510.1871874-CDS-Ecto-sp6_S_contig89:370676..3707711682350510.1871874-CDS-Ecto-sp6_S_contig89:370676..370771Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig89 370677..370771 +
1682350510.1975224-CDS-Ecto-sp6_S_contig89:371703..3719481682350510.1975224-CDS-Ecto-sp6_S_contig89:371703..371948Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig89 371704..371948 +
1682350510.2056139-CDS-Ecto-sp6_S_contig89:373697..3740411682350510.2056139-CDS-Ecto-sp6_S_contig89:373697..374041Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig89 373698..374041 +
1682350510.213809-CDS-Ecto-sp6_S_contig89:374674..3747971682350510.213809-CDS-Ecto-sp6_S_contig89:374674..374797Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig89 374675..374797 +
1682350510.2225728-CDS-Ecto-sp6_S_contig89:375167..3753451682350510.2225728-CDS-Ecto-sp6_S_contig89:375167..375345Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig89 375168..375345 +
1682350510.2303796-CDS-Ecto-sp6_S_contig89:376143..3762591682350510.2303796-CDS-Ecto-sp6_S_contig89:376143..376259Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig89 376144..376259 +
1682350510.2381365-CDS-Ecto-sp6_S_contig89:377151..3772611682350510.2381365-CDS-Ecto-sp6_S_contig89:377151..377261Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig89 377152..377261 +
1682350510.2459865-CDS-Ecto-sp6_S_contig89:378053..3782241682350510.2459865-CDS-Ecto-sp6_S_contig89:378053..378224Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig89 378054..378224 +
1682350510.2540846-CDS-Ecto-sp6_S_contig89:378810..3788711682350510.2540846-CDS-Ecto-sp6_S_contig89:378810..378871Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig89 378811..378871 +
1682350510.2673767-CDS-Ecto-sp6_S_contig89:379524..3800971682350510.2673767-CDS-Ecto-sp6_S_contig89:379524..380097Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig89 379525..380097 +
1682350510.276312-CDS-Ecto-sp6_S_contig89:380755..3811271682350510.276312-CDS-Ecto-sp6_S_contig89:380755..381127Ectocarpus species6 EcLAC_371CDSEcto-sp6_S_contig89 380756..381127 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682350510.2843287-UTR-Ecto-sp6_S_contig89:381127..3813601682350510.2843287-UTR-Ecto-sp6_S_contig89:381127..381360Ectocarpus species6 EcLAC_371UTREcto-sp6_S_contig89 381128..381360 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp6_S_contig89.17941.1

>prot_Ecto-sp6_S_contig89.17941.1 ID=prot_Ecto-sp6_S_contig89.17941.1|Name=mRNA_Ecto-sp6_S_contig89.17941.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=796bp
MDCSAAAGTHDEKIKPWGGLEQQHGTRPTAAWRSDSVDTILLTPAPTVVS
TASVPATMERRGSRARRRMLAVDIAAAEASGNNGSFGVKQNEREQDDPPV
IDTTSVEVERKADGSVAKVNEYVVVRDLGRGSSAEVKLCRLLMPPDRVID
NRHTNDNGMSATRESIADTVGGGGGEESRSGSSGSGIEGQRRRRASGDTY
KERVEGQEGRQDHERDHERDELDGGDLYAVKIFDRAELMRRGARFARPRA
RGPDGALLPAKATPDNYIKVQREIAIMKKLVHPSVVQLVEVIDAPRDGSL
YMVMEYVERGAVMRCVEQEMGRYECSPSVSEGGCLDARTAARYFADVLAG
LEYLHLQLIAHRDLKPENVLIGNDDRAKIADFGVSQYFHDDEPRTPKSAR
SLARSTSRAQMSSTEGTWCFWSPEMCGERGEGAAFNAYASDAWAAGVTLW
CLLYGTVPFFSLNPMDLFTSIAQDPAPVPDGADTTLKDLLNRLLTKDPGK
RLTVPEARDHCWVQPPRPGERCGDRGEDGDGGGEGGERGGSGGSGGSGGS
GGEGGEGGEGGEEGEVGGVAFLREALLAKSSFSSSLSPSALLAADDSRFG
AAAAAAAAAAAVGGGHGDVGDGGGGGGGEGDVGDGGGPKTAGRWADSARE
RVAVSDADVRAAVTEAPGFVLVAKKIKGKVDGMKVKVRRLSSELGGATVA
SLSGVKGRNKTRKKSRNSSSDRGGDAAAADAGDKGAPEEQHSFSSLSGRD
QRRQENRRKTDDEEEEEEEEREEEQESVGPHLARPRASSAACVIS*
back to top

mRNA from alignment at Ecto-sp6_S_contig89:370677..381360+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp6_S_contig89.17941.1 ID=mRNA_Ecto-sp6_S_contig89.17941.1|Name=mRNA_Ecto-sp6_S_contig89.17941.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=10684bp|location=Sequence derived from alignment at Ecto-sp6_S_contig89:370677..381360+ (Ectocarpus species6 EcLAC_371)
ATGGACTGCTCTGCGGCCGCTGGGACGCATGACGAGAAAATAAAACCATG
GGGTGGGCTGGAGCAGCAGCACGGGACACGTCCTACTGCTGCATGGTGGG
TAAATTATGATGCAATTCACAGCAGTTGCTTCTTGCAGAACCTATATTGT
GAAGAAAGTGCAGCAGTAAAGTGGTACACGGTTTGATGCCTAGAACGTGG
TGTGAAGCGAGGGTGTGCGCATCCTTTAAGAGAACGGTTGTTGATGGGTG
AGGCCAAATTTCGCCGAGTCGAATTGCGCCGGCTTTCGGGTCGATGCGGC
ACTCTCTTTCTAGAGAGCGAGTCTCAATGGAGCATGCCCGGACTCATGGA
GAGCGTGCTTCGATGTTTTTGCATAGAAAAGTTAGAGAAAGCAACCGCCA
TTGAAGGGACAGGGTCCGAAACTACAAGATGTGCACCCTCTCGAGCGCAA
CTCAGTCGACAGCAAGAAATTCCCCGACAAACTCTTCCTGCGAAACCTGT
CAGACACAACGTGCCCAAAAATTACTTAAGAATTCGGTAGGAACTAATCA
AGGCTCAATTACCCAGTGAAATTACCCAGTGCTATAAGAAATAACACAAC
TGCTCTGACTCCCGGTCGGAAACCCCTAGGCCAAGCCTATGGAATCCGCA
CGCCGGATTAAACCTACTCGTAGAGTAACTGCATGTTGTTATCTCACAGA
GGCAAGAACCCGAGCTTCGGTCAAATGCAAGAAGTTATTCTTAGTGGCAG
GGAACATCTGTTGACACGCGGAACTTCCGTGTGCCGTCAGTTTGACTCTT
TCTGAAGATAGAAGTCGTCGATGAAAGTCAGAATGCCGTGGTGTAGCAAC
AGCAACTTCAACTTCGGTCGTCTTCTCGAATGGAACACACGCGCCGCTGT
TGCTGTAGACACAATGCCGACTTTTACTTTGAAGGGTACACAGGCTACGT
GGTCGCCTTGTCATGTAGATATAAGGCACGCGGCGGCTGCGACATGGTTC
TCTTTTCGGCGACTGTTGCTGCATCAGGCGTAGCGACTCGGTGGACACGA
TACTGTTAACCCCAGCGCCGACCGTGGTGTCCACGGCTTCCGTGCCGGCG
ACGATGGAGAGGCGAGGTTCTCGCGCAAGGAGGAGGATGCTCGCGGTGGA
CATAGCGGCGGCTGAAGCCTCAGGCAATAACGGTAGCTTCGGGGTGAAGC
AAAACGAGCGGGAGCAAGATGACCCTCCAGTCATCGATACAACGTCCGTG
GAAGTTGAACGAAAGGCGGACGGTAAGCGAACTCAAGCACACGAGCACAG
CATGTACTCGGGAGTACACTACATAAGAGAACGCACGCCAGCAGTGGGCT
AAACACATAGCACACACCAGGTGTAGGTAGCCTCCTTGCTATATATACAG
CGACACGTTGTTTTCATCTTATGCTGGCTTCTTCAAGGAAAGATTACCCT
ATCATACGGAGGAGAGCAACCGCTCTTCTCCCGCTTTGTGGGCCGCTGTC
AAACACCACTTGCTCCACGACAGAGAGAGGGTAATAGTCCGAACGTATCA
GAGCGTTAAGAAGGCGTTACTTCTTCTCCGTTGTCGACATATATCACGAT
ATGAAAATCGACACAACAACGACATATATCACGATAAGAAATCGACACAC
CAATGAGAGCTTCTGTTCCAATAGATCGAAGGCGTTTATTGCTTCCGCAG
AGCCATGGAGCCCTCCGCCAGTGCGGATCAGTTGCAATTTACGAAGCTTT
TTCATGCTGCTTTTGATCACTGCTGTTGCTTGTAGCAGTATTTTCGTTTT
CGGGAACAGACTAGTCAAGAACCCGGTACGAAACACGTCGTTCGTACTCT
TGTTGGAGGGTGACGTGAGAATCGAGAGACGCGAAGAACGCCCGCAAAGC
TTTGACGGTGGGGTACGGAAGAGGGTACGAACCCGACCCTATTTATGGTT
GTCGACACCACGTCGGCAGGTTCGAGAGAGCTGCAAAGAAGCATGACGAA
GCGTTGTTGGTCGAGCTGGCCGCGTGACCATCGCTATGCATATGTGCAGG
AGCTTGAAGAGCAACGCCTTAAACACCGATGATCGCGAGAGAAAATGCCG
CGGTATACAGCAGTAACGCAGCGTGGCCGTAGACTGCCCTGTTTCATGCA
TGTATCCACCTATATATCTGTTTTTTGGCTCGAATTGTCCTCCACGTGTG
TGCGATCGGAAGGCTATGGCTTTCCTCCGAAGTGCGGTGTCATCTGAGCG
TTGGATGCGTTCTCGCAAGTCTACGCGTCCTTCCAGTACTGTGTCGTTGC
AACCTTGTGTGAACACAACCACGCTGCGACGTTCCTGCCTTCATGTGGGG
GGGCTGTGTTTTGTTGTGGCAGGTTGCAGGTTGGTGTCGGCCGTTCATTG
ACTGAAGCATTGGCAGTCAATGGATACGCATAGCGCAGACGTTCTCCATA
TACGCGCGCAGCATTTTCGAAACCAACGCATGCACGTATTCGTCTGGTGT
ATGATCTAGGCGCGTGTCCTGAAGGCTCTATATCCGGTGCGCAGCATCTG
AACCTTTCTGTAGTGCAAATTTAACCTCATGTCGATCTCGGCAGGCCAAC
ATTTTTTTGTGGCCAATCCTTCTGGCAAATTTCATCCAATACACGGCGGT
ACGTACGATCTTGCAGCGTGGAGATATTCTCGGCACCTGGTCGCTACGAT
ATTGTTGAGGGTGTCGAATTGGACAATGTCGCATCAATCGCTTTTTGTTC
TTCTGCGATTATATCAATGCCACGTGATGGAATATTATAGCAAACATTTT
GCAGCAGCTAATTTCTTGCGTAGTGTGGGTCAGTAGCTTCGTCAGGTGAC
GTATTTTTCTTCCTTAGGTCCCCTCTGCTCTTTATTGTCACCCCTCCTCC
CATCCTTCTCTTCTTCTTAGTATGTTTCTCTATGAATCGACGACCACGAT
CATGTATGCAAACAACTTCCCTCCCTGTCCGCGTGCCCCGCCCCTCCCAC
CAAAACACTTCTTTTCGTAAGGATCGGTGGCGAAGGTCAATGAGTATGTG
GTGGTTCGTGATCTCGGGCGTGGTTCCTCGGCGGAAGTTAAGCTGTGCCG
GCTGCTGATGCCGCCAGATCGCGTTATCGACAACCGACACACAAACGATA
ATGGAATGTCGGCTACCCGCGAGAGTATCGCTGATACGGTCGGTGGCGGG
GGCGGGGAGGAGAGCCGCAGCGGCAGCAGCGGTAGCGGGATTGAGGGTCA
ACGACGGCGCCGTGCTAGCGGCGACACTTACAAGGAGCGGGTGGAGGGGC
AGGAGGGGAGGCAGGACCATGAGCGGGACCATGAGCGGGATGAGCTGGAC
GGAGGAGACCTTTATGTGCGTAATGGTGGAGAAGCTTGCGTTGACGTCGA
AAATGTTGATGTTCGTGACACTCCTCTGGTCGTAGACCGATTTCAGAGGC
CGCATCATACAGCAGGTAGTTCTTCAAGTGACGTCCACGTTGCTGCGTCG
AAACCGCCATCCAAAAAACGCTCGCTTGCCTACGGGGAGATAGAAAATGT
GAACGGTAGAGATCCCCAGACGCCAGCAGGTTTTGACAATCGCTACAGCG
AAGAGTATTTGATGCCGTTTCTTGACGAGGTTAATTCGTCTTGGCATTGC
TGATCGCGAAAGCCACCCACCGTGCTGAACGCGAAAGCAACCCAAATGCA
TCACCTAGGCGCAGAGCCAGGAAGAACCGACTAGTCAAGCCATGTGTACA
TATTAACGTGATGTACTGGTTCATTCCGGACTACCTGTACTTGTTGTTGC
TCTTCAGATCTACTCCTCTTTCGCGCATATTGTTGCGCTGTACCCAACAG
CCGTCAACACGTCCCCTCAAGCTGCGGCAGTTTCTCTTGTTGTCAGCTGT
CACCCGTCCTCTCACCCCGTCGCCACTATCTCTCGCTATGTTGCCACCGA
TGTTTGTGTGCGTGTGTGTTTGGGGGGGGGGGGCGCCAAAATCATCAGGC
GGTGAAGATTTTCGACCGGGCCGAGCTAATGCGGCGCGGCGCGCGGTTTG
CAAGACCTCGGGCTAGAGGGCCCGATGGCGCGCTGCTGCCCGCCAAGGCC
ACCCCGGACAACTACATCAAGGTTAACCACGACCGCAACGGTGCTTGGTG
GCTTGTGCTGCCAGTTGTGTGATGAAGGGGGGCATACGCGTAACAACCAG
GGTATATTTTCGGCGATATTTCGGGGAGAGCGAGTACGATCAGAAGGGCT
TTTTAACGTACGATGGGAATGGCGAAAAGGCGTGCTGTGCAGGCTAACAG
GCTCACGGTGATAATTTCCCGTCGATGCACGCACAGTCTATCGCCGAACG
GCCGTGTTTTTCTTGCTCCGACGAGTCACCCGCCCGCCACCGTAACCAAT
TTTCCCTGCGGCATAGTCCCCCCCACACAGCACCACCCACGGCAAACCTG
TCCAAAACGAGTATACCTATATGCATATCATCTACGCACAGGTGCAGCGA
GAAATCGCCATCATGAAGAAGCTGGTGCACCCAAGCGTTGTCCAGCTCGT
CGAGGTGATCGATGCCCCCCGGGATGGCTCCCTGTACATGGTGATGGAGT
ACGTCGAGCGAGGAGCGGTCATGCGCTGCGTCGAGCAGGAGATGGGCCGC
TACGAGTGCTCCCCGAGCGGTCAGTACAGCAGTGCCATTCCATCACTTGA
TGAGCAAAACGTCCAAAAATAAGAAGTAGCCCCCGAGTTGGGGGCTCCTC
GAACTAGGTTCTTGAACGATACGTGGTGCGGCGTGCAGCTTGACAAGGGA
CGCGGGGTCGCGAAGGACAGGATGGGTACCACCCCGCTAGGTTCGCACCT
TCTCTCTTCACAAGAACATGCGCCGGAGAGTGCACTCCGTCAACCATCCC
ACGGCCTGAAACAAGGCCATTTTATTGTGCCCGCTTTTCCAAATTAGTGT
TCCTTCCGCGTTTTATGGTTGTCCGGGTTGCGGCATGAGAGCGAGAAGCA
TTGCTACTGTCACTTTCACACCCGTCTCTCGATGTCATGCTCCAAGTCGG
TTCAAAGGCAGGCACGCCTACCAAAAACCTCGAAGCGCGTCGATTTAGTA
GAGCATCCGTATCGATTATGAGGCAGCCCTGCGTCTCTTTATAGAAGATT
CCGCATCAAAGACCGCCAGGGGACACCGCTCTACGTGCTTGCCCTTATTA
TATTGTCTTTTTCGCGAACATCAGCGAAACGCGGCAGCCGGCACTTTTTT
TAGGGGGCGGGAGGCGGGGGGGAACTGGAAGCACAACGCGTGAATGGGCT
TTTGATCAAGTCAGGTTCGTAAACCTCCAAAACCACACCTCGCGATTTCT
ACCCCGCCTGTTTCAAGGTCTACGAAAGAATTGCTTCGGTCCTATGCGAA
CGATATTCTTTTTAAGCGATTGATCCCTTTGCCGCCCTCCCCACACACAC
GCGAAAACCAACCGCAGTTAGTGAAGGCGGCTGCTTGGACGCGCGTACAG
CGGCCCGCTACTTTGCCGACGTCCTGGCGGGGCTGGAATACCTTCACTTG
CAGCTCATCGCGCACCGTGACCTCAAGCCTGAGGTAGGTAGGTAGGTCGG
TCGGTCGCTCTATAACCGGCAGATGTCTTGGGACAGTGGGTTGTTATATG
CCATTATCTTATAGAAAAATGACGCACTTTCTTGTTGCTGTTGGTTTTGA
TGTTGGAGTTACTATGGCGGTGGTTGTTTCTGTTGTTGTTGACGTTGATG
TTGATGTTGATGTTGATGTTGGGGGCGTTGTTGCTGTCTTCTCTGTGCTT
GTGAGATGCGTACGCAGCATGGAAGAAGGGTTGATACCCGCCGGAGACGG
TTTGGTACCAGAAGGGTGTGTGCCGGATGAATCACATCAGCGGTGAAACA
AAGCCAGGCCGGCATGTCACCGGGACTCGCGAAGGGATGTTGCAGATATC
CCTTGCGGCGAACTAGATGGTTTTTGCGACTTCGGCCGGGACAATGACGC
CGGATGAGGTGCGGGAAAACCTCTCGTTCCCCGCCACAACATGCTGTGAG
CTTTGCTCGTGCTGTAAGGGTTGAGGCGGACCTGGACGGCTTGTGTGCCG
CACGCAGAACTAACTGACCCGGGGCCATGGTCTGTCCAACGCTGCACGTA
TGCCACACATTGCCTCGGGAGCCGTTGTGCGCAACATTTTTAATTCTGCC
GATCCTGGACGGGTGCCTGTTGCTTGCGAAGCGCTACTATCCACCCGACC
TCGCCGGCCCCCCTGCCTTGTTGTACGTCTCGTAAACAAAATGACGGAGT
TCTGTGATAATGATTGCATTCGTGACTGTTGGGTTGCCAAAACACCCCCC
CCCTTAACAATCCCCCCGCTGTATTCCGCGGTTTTTATTTTCTTCTTGTT
CCTTCGTCTCGGTTGGCACACGAACGACATATAAAACACCTCCGAAAACG
ACAAAAACACGAAAAAAAAAAATAGAACGTGCTCATCGGGAACGACGACC
GTGCGAAGATAGCGGACTTCGGCGTGTCTCAATACTTCCACGATGACGAG
CCTCGGACTCCCAAGTCGGCGCGCTCCCTCGCCAGGTGATTTTATTCAGC
CCCACCCACGCTGCCGTCTGTCATATTTTGGTGTAGTCCGCATTAGATCA
AATAGGCGTCGTTGTTTGCCCCTGTCTCTACAGTAGTGTCCGTCGATCAA
TCCCTTTTTGTGGGTGCACCGGGGCAGTAGATGCCGAGCTGAAGCTGTAT
GTAGCGTCATGATCGAGTTTCTCTGGCTCCAATGCGGCAACTCACGACTC
CAATAGTAGATTTCCTGTAGCACTTAAGTACATTTCCATCCCCTAGTCAT
TATTGCGCGTGCGTGCGCAAGTCTACTGTGACGCCGGGTGTGTGTTGACT
GTCAACCAGCGGAGGATTTGAGAGCTACCTACCTCACGGTGTGAAACAAC
GTCGGCTCACGAGATACTCCTCGCACAGCGTGCTGGCCGGCAGGGCAAAG
GCAGGGCCAGGTTCCGGCAGTTTTTTTCTATTAAGGGGAGCTTCAGCCTT
CATCTACTACGAACGAACTGCTGTTGCTCCTTAGAAACCTCTGGTTCAGC
TGTCGGTGAGGGGGTGGGTAACACCGCATTGTATCCGAGTTGTTCCGATC
GTCCTTTGATTATGAAAGAGACACCAGCCTGCCCACCTTGAACGCTCAAG
GAATATCCAATAATCGCTTCGCTTCATTCAGGAGTGCCTTATGGGTAAGC
CATATATTGCCGCCACGATATCAGACAAGCTTGACCGAGGGCTGAGTTTG
GATCCCCCCTCACCTCACCCTCTCTTCCGGACCCCCCGCTTGTCCTCGAA
CCACACTCTTTGTAACAAAACAAAAAGATCCACGTCTCGCGCCCAGATGA
GCTCCACGGAGGGCACGTGGTGCTTCTGGTCGCCCGAGATGTGCGGCGAA
CGGGGAGAGGGTGCCGCCTTCAACGCTTACGCGTCCGACGCGTGGGCCGC
CGGAGTGACGCTCTGGTGCCTCCTCTACGGGACCGTGCCCTTCTTCAGGT
GTGCTCCCATTGGTTTGATTGGTTGAGTGGAAACTCTTGTTTGTTCGGCA
GGTTTTTGGGTGCAGTTCAGGTGCTGCTGATGGCCGTTGTTAGCGTCGTG
ACACCGACTACGACAAGGGTGTTTGGTATGTGTTGGGCGCGCGCACAATT
GTGAGGTGTGTGTTTGTTTTATCTTTGACCGCGCTAACCGTTGTTGCCTG
GAAGAGAAAGACAGCGCTCTCGGCGGGAAGACGAGCAAATGTGGTGTCTG
GACATGCTTCAATGAACTCGGGTTTACGTCCGACTGTCGTGGAACACAAC
TGGCTGGCCAGCCGACGCTCGTTTGCCTCAACGCGACCAGAAGCGTGAAA
TATTTCACAATCCGCGCGGTCCTCCAAGCGGGAGGTTAACCTGTTGATGA
GCTTTGATCGGCCAGTCCGTCCTTTTCTTTGAGCCCCGCCCCCCGGCGCC
CGTCCTGTCGTGAACCGGAACTCTCGTGCTCTTTTGTTAGCCTCGCCAGG
CTGCCCTCTTCCGGACCTAGAGTTGTGATTTTCTCCTTTGTACGCCCCAC
CCCCCCTTTGTTTCTCTTTTCGAACCCCGCGCAGCCTGAACCCCATGGAC
CTGTTCACGTCCATCGCACAGGATCCCGCGCCAGTACCAGATGGGGTGAG
ACGGTAGTAAGATGGGATACACAAGGAATATACATGTACAACGAGATAGA
CACAAACAGAGAGAGGAGTGTATGTGTTGTGCGAGAGAGGCAGCGATAGA
TAGACGGATGGAAGCAGCGAGAGAGAGAGACAGACGGACAGACAGACAGA
CAGACAGACAGACAGGCAGAGAGAAAGGAAACGTGAATCAGCCACAAGGG
AAAAAAGAGAGGGACAGCGTGTGCGTCGCCTCTCCAAGAGCCAACGGCAT
GTAGTTATCGCCGTGTCGGTCGTACAAAAACTTGACTCGTACGGCAGGCA
GATACCGCAAACGACTACATTCGCAACTGATTAGGCATCAAATAACGAAG
CGATTGAACGCTTGAGGAGTGTGGAGCATCATGCGGGCCGGGCTGGGCTT
GACCAGACAGGGAAGACCTGGCCGTCGCGACGAGTGCTTGTACGAAAGCA
CACACGGGTGGTCCGTGGTAGATAGTATGGTAATCCAGGGAGCTACACCA
AGTCGCCCGTCTACCCAACCGCCGTTGCCTATCACCACAAGGCATGCCGG
AAGCATCCCCCATACAAATAATTTAGTTTTTGTTTCCTTCCAGAGAGCTT
GAGTTCGTTTCTTGCCCCCACCCCCCGCCCCGCACCCCCACGAAACAGGC
CGACACGACCCTCAAAGACCTCCTCAACCGGCTTCTCACCAAGGACCCGG
GGAAGCGATTGACGGTGCCGGAGGCCCGCGACCACTGCTGGGTACAGCCG
CCACGGCCGGGTGAGCGGTGTGGCGATCGGGGCGAAGATGGCGACGGCGG
CGGGGAAGGTGGCGAACGCGGCGGAAGCGGCGGAAGCGGCGGAAGCGGCG
GAAGTGGTGGCGAAGGTGGCGAAGGTGGCGAAGGTGGCGAAGAAGGCGAG
GTTGGGGGCGTGGCGTTCCTTCGCGAGGCGCTGCTGGCGAAAAGCAGTTT
TTCTTCTTCTCTCTCTCCTTCCGCCCTCCTCGCGGCCGATGACTCTCGTT
TCGGCGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTTGGCGGTGGT
CATGGTGATGTTGGTGACGGTGGTGGTGGTGGTGGTGGAGAAGGTGATGT
TGGTGATGGCGGCGGCCCAAAGACGGCCGGTCGCTGGGCAGACAGCGCGC
GCGAGAGGGTCGCCGTTAGCGACGCGGACGTGAGAGCAGCTGTGACGGAG
GCCCCCGGCTTCGTCCTCGTTGTGAGTCAAGAGCAACAGGCTGGACTTTT
TTCTCTCCTAGGTTATGAAGTTCGTTCCTTTGCATTGAAGGGGGGCAAGG
GGTTACATGCATCGACGACAACGCAACAGCATCAAGTCGTTTCGAAACAG
CTGTGCCTTTGACTTCACATGGCACACACGCTTTAGAAACCGAAAAACAC
GCCGTCAGCCAGCTAAGCCGTGTGTGTCGAGGGCACCCCCAGAGGGGGTT
ACTGATTTACGGTATGTGGAAAAAAACAGTGCGGCGGCGTGCGATGCCCC
CCTTCGATTGGTGTTGGATTTCGATGCATCCCCATGGCGTTCGGTAGCGA
AGGTCTTTCTTTCTTCGCGATACGAACGGGCAGCAGCGTGCCCCCCCGTG
AAATCGGTTTTCGGAACTAGTTGCACTGGGGTGTTTGTTTCACCAGAGCT
ACGACCGCCGCTGCTGCTACTGGTACAACTACTGCTGCTGCCGTTGCTAT
TACAACTGTTTCTGCTGCTTGAACTGCAGAACGTTTCGCACGGGTACTAG
TGGCGAGAGACACACAACAACGCGCAAAGCATTTTACACACCCGTGGCAT
GCTTCATCGACTGTTGCTAGAACAAACAAGCTGAAATAACCCGCGGAAAC
GCTTGCCGCCGTGCTGATCACGTACCCAGGCGAAGAAGATCAAGGGCAAG
GTGGACGGGATGAAGGTGAAGGTGCGGCGGCTGTCGAGCGAGCTCGGGGG
TGCTACGGTGGCGTCGCTCTCCGGGGTGAAGGGAAGAAACAAGACGCGCA
AGAAGAGCCGAAACAGCAGCAGTGATAGAGGCGGAGATGCTGCCGCCGCC
GACGCCGGCGACAAGGGTGCTCCGGAGGAACAACACTCCTTCTCCTCGCT
GTCGGGAAGGGACCAGCGAAGGCAAGAAAATAGACGAAAGACGGACGATG
AGGAGGAGGAGGAGGAGGAAGAGCGGGAAGAAGAACAGGAGTCTGTAGGA
CCTCACCTAGCGCGACCGAGAGCGTCATCGGCCGCCTGCGTGATTAGCTA
GCTGTTTTAGCGTCTATAGCCGGCTCCTACCCTTGCTGTGCTGCTGCCTA
GACGCTCGCTCGCTCGGGGAGAAAGGGTGTCAGCCGTGGGCCGACGGTGG
GCGGGTGAGCGCCGAGAGAGGCTGGAGGCAGGGGCGGGGTGAGGTAGGAG
ACCTCGTTTGTGAAACAATAGGCGCGCGTGCCGTTGTTCCTCGTGTTACG
TGGGTACACGTACAATTGTAGTTTGTGTCCACAT
back to top

Coding sequence (CDS) from alignment at Ecto-sp6_S_contig89:370677..381360+

>mRNA_Ecto-sp6_S_contig89.17941.1 ID=mRNA_Ecto-sp6_S_contig89.17941.1|Name=mRNA_Ecto-sp6_S_contig89.17941.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=2388bp|location=Sequence derived from alignment at Ecto-sp6_S_contig89:370677..381360+ (Ectocarpus species6 EcLAC_371)
ATGGACTGCTCTGCGGCCGCTGGGACGCATGACGAGAAAATAAAACCATG
GGGTGGGCTGGAGCAGCAGCACGGGACACGTCCTACTGCTGCATGGCGTA
GCGACTCGGTGGACACGATACTGTTAACCCCAGCGCCGACCGTGGTGTCC
ACGGCTTCCGTGCCGGCGACGATGGAGAGGCGAGGTTCTCGCGCAAGGAG
GAGGATGCTCGCGGTGGACATAGCGGCGGCTGAAGCCTCAGGCAATAACG
GTAGCTTCGGGGTGAAGCAAAACGAGCGGGAGCAAGATGACCCTCCAGTC
ATCGATACAACGTCCGTGGAAGTTGAACGAAAGGCGGACGGATCGGTGGC
GAAGGTCAATGAGTATGTGGTGGTTCGTGATCTCGGGCGTGGTTCCTCGG
CGGAAGTTAAGCTGTGCCGGCTGCTGATGCCGCCAGATCGCGTTATCGAC
AACCGACACACAAACGATAATGGAATGTCGGCTACCCGCGAGAGTATCGC
TGATACGGTCGGTGGCGGGGGCGGGGAGGAGAGCCGCAGCGGCAGCAGCG
GTAGCGGGATTGAGGGTCAACGACGGCGCCGTGCTAGCGGCGACACTTAC
AAGGAGCGGGTGGAGGGGCAGGAGGGGAGGCAGGACCATGAGCGGGACCA
TGAGCGGGATGAGCTGGACGGAGGAGACCTTTATGCGGTGAAGATTTTCG
ACCGGGCCGAGCTAATGCGGCGCGGCGCGCGGTTTGCAAGACCTCGGGCT
AGAGGGCCCGATGGCGCGCTGCTGCCCGCCAAGGCCACCCCGGACAACTA
CATCAAGGTGCAGCGAGAAATCGCCATCATGAAGAAGCTGGTGCACCCAA
GCGTTGTCCAGCTCGTCGAGGTGATCGATGCCCCCCGGGATGGCTCCCTG
TACATGGTGATGGAGTACGTCGAGCGAGGAGCGGTCATGCGCTGCGTCGA
GCAGGAGATGGGCCGCTACGAGTGCTCCCCGAGCGTTAGTGAAGGCGGCT
GCTTGGACGCGCGTACAGCGGCCCGCTACTTTGCCGACGTCCTGGCGGGG
CTGGAATACCTTCACTTGCAGCTCATCGCGCACCGTGACCTCAAGCCTGA
GAACGTGCTCATCGGGAACGACGACCGTGCGAAGATAGCGGACTTCGGCG
TGTCTCAATACTTCCACGATGACGAGCCTCGGACTCCCAAGTCGGCGCGC
TCCCTCGCCAGATCCACGTCTCGCGCCCAGATGAGCTCCACGGAGGGCAC
GTGGTGCTTCTGGTCGCCCGAGATGTGCGGCGAACGGGGAGAGGGTGCCG
CCTTCAACGCTTACGCGTCCGACGCGTGGGCCGCCGGAGTGACGCTCTGG
TGCCTCCTCTACGGGACCGTGCCCTTCTTCAGCCTGAACCCCATGGACCT
GTTCACGTCCATCGCACAGGATCCCGCGCCAGTACCAGATGGGGCCGACA
CGACCCTCAAAGACCTCCTCAACCGGCTTCTCACCAAGGACCCGGGGAAG
CGATTGACGGTGCCGGAGGCCCGCGACCACTGCTGGGTACAGCCGCCACG
GCCGGGTGAGCGGTGTGGCGATCGGGGCGAAGATGGCGACGGCGGCGGGG
AAGGTGGCGAACGCGGCGGAAGCGGCGGAAGCGGCGGAAGCGGCGGAAGT
GGTGGCGAAGGTGGCGAAGGTGGCGAAGGTGGCGAAGAAGGCGAGGTTGG
GGGCGTGGCGTTCCTTCGCGAGGCGCTGCTGGCGAAAAGCAGTTTTTCTT
CTTCTCTCTCTCCTTCCGCCCTCCTCGCGGCCGATGACTCTCGTTTCGGC
GCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTTGGCGGTGGTCATGG
TGATGTTGGTGACGGTGGTGGTGGTGGTGGTGGAGAAGGTGATGTTGGTG
ATGGCGGCGGCCCAAAGACGGCCGGTCGCTGGGCAGACAGCGCGCGCGAG
AGGGTCGCCGTTAGCGACGCGGACGTGAGAGCAGCTGTGACGGAGGCCCC
CGGCTTCGTCCTCGTTGCGAAGAAGATCAAGGGCAAGGTGGACGGGATGA
AGGTGAAGGTGCGGCGGCTGTCGAGCGAGCTCGGGGGTGCTACGGTGGCG
TCGCTCTCCGGGGTGAAGGGAAGAAACAAGACGCGCAAGAAGAGCCGAAA
CAGCAGCAGTGATAGAGGCGGAGATGCTGCCGCCGCCGACGCCGGCGACA
AGGGTGCTCCGGAGGAACAACACTCCTTCTCCTCGCTGTCGGGAAGGGAC
CAGCGAAGGCAAGAAAATAGACGAAAGACGGACGATGAGGAGGAGGAGGA
GGAGGAAGAGCGGGAAGAAGAACAGGAGTCTGTAGGACCTCACCTAGCGC
GACCGAGAGCGTCATCGGCCGCCTGCGTGATTAGCTAG
back to top