mRNA_Ecto-sp6_S_contig89.17937.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig89.17937.1 vs. uniprot
Match: D8LKF0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKF0_ECTSI) HSP 1 Score: 446 bits (1148), Expect = 5.740e-158 Identity = 212/226 (93.81%), Postives = 216/226 (95.58%), Query Frame = 1
Query: 1 MLQQPGSSTDDLQHCPAYSSPDCGFADLFVVNHGKDTPRADDLGGSFKFSMELGPFTFAPTPTFRGNSMSVDDYPLIPGQFLSAAPVVNSANLEVTEVRDLILRQGDIPAYPTGHTLGTPRYGVGRGYSTSGGLGCAVEARWERATNGGEDMGVPVHLAVKNGRWRVGRGWMCTLGRSPRVEGGWRVHLPWDSHRKAVKVASLQLRDSSVVMSPEDGHILWSSSSS 678
MLQQPGSSTDDLQHCPAYSSPDCGFADLFVVN GKDTPRADDLGGSFKFSMELGPFTFAPTPTFRGNS+SVDDYPLIPGQFLSAAPVVNSANLEVTEVRDLILRQGDIPAYPTGHTLGTPRYGVGRGYST+GGLGCAVEA WERATNGGEDMGVPVHLA KNGRWRVGRGWMCTLGRSPRV GGW+VHLPWDSH KA+K ASLQL D SVVMS EDGHILWSSS S
Sbjct: 1 MLQQPGSSTDDLQHCPAYSSPDCGFADLFVVNDGKDTPRADDLGGSFKFSMELGPFTFAPTPTFRGNSISVDDYPLIPGQFLSAAPVVNSANLEVTEVRDLILRQGDIPAYPTGHTLGTPRYGVGRGYSTNGGLGCAVEAWWERATNGGEDMGVPVHLAEKNGRWRVGRGWMCTLGRSPRVAGGWKVHLPWDSHGKALKAASLQLGDGSVVMSTEDGHILWSSSPS 226
BLAST of mRNA_Ecto-sp6_S_contig89.17937.1 vs. uniprot
Match: D8LKF2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKF2_ECTSI) HSP 1 Score: 328 bits (840), Expect = 3.100e-103 Identity = 162/202 (80.20%), Postives = 172/202 (85.15%), Query Frame = 1
Query: 76 ADLFVVNHGKDTPRADDLGGSFKFSMELGPFTFAPTPTFRGNSMSVDDYPLIPGQFLSAAPVVNSANLEVTEVRDLILRQGDIPAYPTGHT-LGTPRYGVGRGYSTSGGLGCAVEARWERATNGGEDMGVPVHLAVKNGRWRVGRGWMCTLGRSPRVEGGWRVHLPWDSHRKAVKVASLQLRDSSVVMSPEDGHILWSSSSS 678
AD+F DTPRA DLG SFKFSMELGPFTFAPTP FRG+S+S+DDYPLIPGQFLS APVVNSANLEVTEV DLILRQGDIPAYPT T L R GY+ +GGLGCAVEA WERATNGGEDMG+PVHLAVKNGRWRVGRGWMCTLGRSPRV GGWRVHLPWDSH KA+K ASLQ+RD SVVM+ EDGHILWSSS S
Sbjct: 669 ADVFA-----DTPRAGDLGDSFKFSMELGPFTFAPTPAFRGDSISIDDYPLIPGQFLSTAPVVNSANLEVTEVGDLILRQGDIPAYPTNDTPLWAHRVTGSVGYTANGGLGCAVEAWWERATNGGEDMGIPVHLAVKNGRWRVGRGWMCTLGRSPRVAGGWRVHLPWDSHGKALKAASLQVRDGSVVMATEDGHILWSSSPS 865
BLAST of mRNA_Ecto-sp6_S_contig89.17937.1 vs. uniprot
Match: A0A6H5JC81_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC81_9PHAE) HSP 1 Score: 309 bits (791), Expect = 8.030e-103 Identity = 153/192 (79.69%), Postives = 163/192 (84.90%), Query Frame = 1
Query: 106 DTPRADDLGGSFKFSMELGPFTFAPTPTFRGNSMSVDDYPLIPGQFLSAAPVVNSANLEVTEVRDLILRQGDIPAYPTG-HTLGTPRYGVGRGYSTSGGLGCAVEARWERATNGGEDMGVPVHLAVKNGRWRVGRGWMCTLGRSPRVEGGWRVHLPWDSHRKAVKVASLQLRDSSVVMSPEDGHILWSSSSS 678
DTPRA + G SFKFS+ELGPFTFAPTP FRG+S+SVDDYPLIPGQFLS APVV+SANLEVTEV D+ILRQGDIPAYPT L R G + GGLGCAVEA WERATNGG+DM VPVHLAVKNGRWRVGRGWMCTLGRSPRV GGWRVHLPWDSH KA+K ASLQLRD S VM+ EDGHILWSSSSS
Sbjct: 88 DTPRAGNPGDSFKFSIELGPFTFAPTPAFRGDSISVDDYPLIPGQFLSTAPVVDSANLEVTEVGDVILRQGDIPAYPTNPKPLWAHRATGSVGGTAKGGLGCAVEAWWERATNGGQDMRVPVHLAVKNGRWRVGRGWMCTLGRSPRVAGGWRVHLPWDSHGKALKAASLQLRDGSAVMATEDGHILWSSSSS 279
BLAST of mRNA_Ecto-sp6_S_contig89.17937.1 vs. uniprot
Match: D8LK83_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK83_ECTSI) HSP 1 Score: 306 bits (785), Expect = 6.540e-102 Identity = 152/192 (79.17%), Postives = 161/192 (83.85%), Query Frame = 1
Query: 106 DTPRADDLGGSFKFSMELGPFTFAPTPTFRGNSMSVDDYPLIPGQFLSAAPVVNSANLEVTEVRDLILRQGDIPAYPTGHT-LGTPRYGVGRGYSTSGGLGCAVEARWERATNGGEDMGVPVHLAVKNGRWRVGRGWMCTLGRSPRVEGGWRVHLPWDSHRKAVKVASLQLRDSSVVMSPEDGHILWSSSSS 678
DTPRA + G SFKFSMELGPFTFAPTP FRG+S+SVDDYPLIPGQFLS APVVNSANLEVTEV DLILRQGDIPAYPT H L R G + + LGCA+E W+RATNGGEDMGVPVHLAVKNGRWRVGRGWMCTLGRSPRV GGWRVHLPWDSH KA+K ASLQL D S VM+ EDGHILWSSS S
Sbjct: 88 DTPRAGNPGDSFKFSMELGPFTFAPTPAFRGDSISVDDYPLIPGQFLSTAPVVNSANLEVTEVGDLILRQGDIPAYPTDHKPLWAHRVTGSVGGTANWRLGCALEVWWDRATNGGEDMGVPVHLAVKNGRWRVGRGWMCTLGRSPRVAGGWRVHLPWDSHGKALKAASLQLCDGSAVMATEDGHILWSSSPS 279
BLAST of mRNA_Ecto-sp6_S_contig89.17937.1 vs. uniprot
Match: A0A6H5KV41_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV41_9PHAE) HSP 1 Score: 315 bits (806), Expect = 1.070e-100 Identity = 155/192 (80.73%), Postives = 166/192 (86.46%), Query Frame = 1
Query: 106 DTPRADDLGGSFKFSMELGPFTFAPTPTFRGNSMSVDDYPLIPGQFLSAAPVVNSANLEVTEVRDLILRQGDIPAYPTGHT-LGTPRYGVGRGYSTSGGLGCAVEARWERATNGGEDMGVPVHLAVKNGRWRVGRGWMCTLGRSPRVEGGWRVHLPWDSHRKAVKVASLQLRDSSVVMSPEDGHILWSSSSS 678
DTPRA DLG SFKFSMELGPFTFAPTP FRG+S+SVDDYPLIPGQFLS APVV+SANLE+TEV DLILRQGDIPAYPT T L R G + +GGLGCAVEA WERATNGG+DMGVPVHLAVKNGRWRVGRGWMCTLG+SPR GGWRVHLPWDSH KA+K ASLQLR+ SVVM+ EDGHILWSSS S
Sbjct: 424 DTPRAGDLGNSFKFSMELGPFTFAPTPAFRGDSISVDDYPLIPGQFLSTAPVVDSANLELTEVGDLILRQGDIPAYPTDDTPLWAHRVTGSVGGTANGGLGCAVEAWWERATNGGQDMGVPVHLAVKNGRWRVGRGWMCTLGQSPRPVGGWRVHLPWDSHGKALKAASLQLRNGSVVMATEDGHILWSSSPS 615
BLAST of mRNA_Ecto-sp6_S_contig89.17937.1 vs. uniprot
Match: D8LK90_ECTSI (PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK90_ECTSI) HSP 1 Score: 277 bits (708), Expect = 1.020e-89 Identity = 137/192 (71.35%), Postives = 151/192 (78.65%), Query Frame = 1
Query: 106 DTPRADDLGGSFKFSMELGPFTFAPTPTFRGNSMSVDDYPLIPGQFLSAAPVVNSANLEVTEVRDLILRQGDIPAYPTGHT-LGTPRYGVGRGYSTSGGLGCAVEARWERATNGGEDMGVPVHLAVKNGRWRVGRGWMCTLGRSPRVEGGWRVHLPWDSHRKAVKVASLQLRDSSVVMSPEDGHILWSSSSS 678
DTPRA + G SFKFSMELGPFTFAPTP FRG+S+SVDDYPLIPGQ LS APVV+SANLEVTEV DL+LR+GDIPAYP+ H L R G + + LGCA+E W RATNGGE MGVPVHL VKNGRWRVGRGWMCTLGR P V GGWRVHLPWDSH K +K A LQL D SVVM+ +G + WSSS S
Sbjct: 124 DTPRAGNPGDSFKFSMELGPFTFAPTPAFRGDSISVDDYPLIPGQILSTAPVVDSANLEVTEVGDLVLRRGDIPAYPSDHKPLWAHRVTGSVGGTANWRLGCALEVWWHRATNGGEGMGVPVHLVVKNGRWRVGRGWMCTLGRIPSVAGGWRVHLPWDSHGKTLKAALLQLCDGSVVMATGEGDVAWSSSPS 315
BLAST of mRNA_Ecto-sp6_S_contig89.17937.1 vs. uniprot
Match: D8LKF8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKF8_ECTSI) HSP 1 Score: 290 bits (743), Expect = 2.170e-86 Identity = 142/170 (83.53%), Postives = 148/170 (87.06%), Query Frame = 1
Query: 106 DTPRADDLGGSFKFSMELGPFTFAPTPTFRGNSMSVDDYPLIPGQFLSAAPVVNSANLEVTEVRDLILRQGDIPAYPTGHT-LGTPRYGVGRGYSTSGGLGCAVEARWERATNGGEDMGVPVHLAVKNGRWRVGRGWMCTLGRSPRVEGGWRVHLPWDSHRKAVKVASLQ 612
DTPRA DLG SFKFS ELGPFTFAPTP FRG+S+SVDDYPLIPGQFLS APVVNSANLEVTEV DLILRQGDIPAYPT T L R GY+ SGGLGCA+EA WERATNGGEDMG+PVHLAVKNGRWRVGRGWMCTLGRSPRV GGWRVHLPWDSH KA+K ASLQ
Sbjct: 1720 DTPRAGDLGDSFKFSTELGPFTFAPTPAFRGDSISVDDYPLIPGQFLSTAPVVNSANLEVTEVGDLILRQGDIPAYPTNDTPLWAHRVTGSVGYTASGGLGCALEAWWERATNGGEDMGIPVHLAVKNGRWRVGRGWMCTLGRSPRVAGGWRVHLPWDSHGKALKAASLQ 1889
BLAST of mRNA_Ecto-sp6_S_contig89.17937.1 vs. uniprot
Match: A0A6H5JM55_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM55_9PHAE) HSP 1 Score: 194 bits (493), Expect = 2.210e-57 Identity = 129/298 (43.29%), Postives = 143/298 (47.99%), Query Frame = 1
Query: 103 KDTPRADDLGGSFKFSMELGPFTFAPTPTFRGNSMSVDDYPLIP-----------------------------------------------------------GQFLSAAPVV---NSANLEVTEVRDLILR-------------------------------------------QGDIPAYPTGHT-LGTPRYGVGRGYSTSGGLGCAVEARWERATNGGEDMGVPVHLAVKNGRWRVGRGWMCTLGRSPRVEGGWRVHLPWDSHRKAVKVASLQLRDSSVVMSPEDGHILWSSSSS 678
+DT RADD G SFKFSMELG FTFAP RG+S+SVDDY IP G+ L AA + +S + + D IL QGDIPAYPT +T L R G + +GGLGCAVE WERATNGG DMGV VHLA+KN RWRVGRG MCTLG+SPR GGWRVHLPWDSH K +K ASLQLRD SVVMS ED HILWSSS S
Sbjct: 10 QDTLRADDSGDSFKFSMELGSFTFAPASAVRGDSISVDDYLPIPDHSCRRHRLATNDGEAMGVPVHLAKKNGRWRVGRGWMCTLGRSPKVARGWRVQLPWDSHGKTLKAASLQLRDSSVVMTTEDGHDHILWSSSRSPQKSIDGYPANRVLLNTGLKVGFSAGISPWSCFWQNQVQGDIPAYPTDNTPLWAYRPTGSVGGTANGGLGCAVEGWWERATNGGRDMGVLVHLAMKNSRWRVGRGRMCTLGQSPRPAGGWRVHLPWDSHGKTLKAASLQLRDGSVVMSTEDAHILWSSSPS 307
BLAST of mRNA_Ecto-sp6_S_contig89.17937.1 vs. uniprot
Match: D8LQD9_ECTSI (PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQD9_ECTSI) HSP 1 Score: 190 bits (483), Expect = 3.550e-54 Identity = 98/196 (50.00%), Postives = 126/196 (64.29%), Query Frame = 1
Query: 91 VNHGKDTPRADDLGGSFKFSMELGPFTFAPTPTFRGNSMSVDDYPLIPGQFLSAAPVVNSANLEVTEVRDLILRQGDIPAYPTGHT-LGTPRYGVGRGYSTSGGLGCAVEARWERATNGGEDMGVPVHLAVKNGRWRVGRGWMCTLGRSPRVEGGWRVHLPWDSHRKAVKVASLQLRDSSVVMSPEDGHILWSSSS 675
N P A +LG S S +LGP T +P FRG SM+ DYPL GQFLS AP+V+S N+E+TE+ D+ILR GDIPA+ + L R G GGLGC +E+ W R G D +PVHL VKNGRWRVGRG +CT+G+SP+ G WR +LPWD+ +A+K A L+LRD ++V+ G ILWSS+S
Sbjct: 261 TNRLDGAPLAQNLGDSSVTSSKLGPDTPEVSPAFRGQSMAPGDYPLQTGQFLSTAPLVDSTNVEITEIGDVILRAGDIPAFSGDKSPLWAYRATGSTGDKADGGLGCVLESWWRRMVKGTYDD-IPVHLYVKNGRWRVGRGRLCTMGQSPKPHGSWRANLPWDAKGRAIKTAGLELRDGALVLVTPQGEILWSSAS 455
BLAST of mRNA_Ecto-sp6_S_contig89.17937.1 vs. uniprot
Match: D8LQD2_ECTSI (PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQD2_ECTSI) HSP 1 Score: 181 bits (459), Expect = 4.500e-52 Identity = 94/196 (47.96%), Postives = 123/196 (62.76%), Query Frame = 1
Query: 91 VNHGKDTPRADDLGGSFKFSMELGPFTFAPTPTFRGNSMSVDDYPLIPGQFLSAAPVVNSANLEVTEVRDLILRQGDIPAYPTGHT-LGTPRYGVGRGYSTSGGLGCAVEARWERATNGGEDMGVPVHLAVKNGRWRVGRGWMCTLGRSPRVEGGWRVHLPWDSHRKAVKVASLQLRDSSVVMSPEDGHILWSSSS 675
N P A +LG S S +L P T +P FRG+ MS DYPL GQFLS A +V+S N+E+TE+ D+I+R GDIPA+ L R G GGLGC +E+ W R G +D +PVHL VKNGRWRVGRG +CT+G+SP+ G WR +LPWD+ +A+K A L+LRD ++V+ G LWSS+S
Sbjct: 121 TNRLDGAPLAQNLGDSSVTSSKLEPDTPDASPAFRGHVMSPGDYPLQTGQFLSTASLVDSTNVEITEIGDVIVRAGDIPAFSGDKPPLWAYRATGSTGDKADGGLGCVLESWWRRMVKGTDDD-IPVHLYVKNGRWRVGRGRLCTMGQSPKPHGSWRANLPWDAKGRAIKTAGLELRDGALVLVTPQGETLWSSAS 315 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig89.17937.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig89.17937.1 >prot_Ecto-sp6_S_contig89.17937.1 ID=prot_Ecto-sp6_S_contig89.17937.1|Name=mRNA_Ecto-sp6_S_contig89.17937.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=227bp MLQQPGSSTDDLQHCPAYSSPDCGFADLFVVNHGKDTPRADDLGGSFKFSback to top mRNA from alignment at Ecto-sp6_S_contig89:304643..306930+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig89.17937.1 ID=mRNA_Ecto-sp6_S_contig89.17937.1|Name=mRNA_Ecto-sp6_S_contig89.17937.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=2288bp|location=Sequence derived from alignment at Ecto-sp6_S_contig89:304643..306930+ (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig89:304643..306930+ >mRNA_Ecto-sp6_S_contig89.17937.1 ID=mRNA_Ecto-sp6_S_contig89.17937.1|Name=mRNA_Ecto-sp6_S_contig89.17937.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=681bp|location=Sequence derived from alignment at Ecto-sp6_S_contig89:304643..306930+ (Ectocarpus species6 EcLAC_371)back to top |