mRNA_Ecto-sp6_S_contig89.17919.1 (mRNA) Ectocarpus species6 EcLAC_371
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Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig89.17919.1 vs. uniprot
Match: D8LKG5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKG5_ECTSI) HSP 1 Score: 1524 bits (3945), Expect = 0.000e+0 Identity = 1126/1259 (89.44%), Postives = 1136/1259 (90.23%), Query Frame = 1
Query: 1 PDKEREDAKTSAAEGKPPEALPLSTSSKVHGDGAASGGTAEPSLTAPNXXXXXXXXXXXXXXXXXXXXXXASAEKEADAAHKMPEPESWSEWRALSSDDESDRGARAGGDASDGGPTARNVRGTDQGFEISVRRGSSLERQSGDTDVGRRGAPCERSASPRGRSFGRSSRSRDRGSRYDRGDTSRRSTTRERCXXXXXXXXXXXXXXXXXXXXXXXSRRPTERSRGYGTLARSDERAAEPSRYAALADESQTSKRARVDATATTRAAAARTAALSSLKKQESMVLPAAGKVPPSTTGGSKALKGPDSAGAKTDEVSQAADKVSPNTPGVPQQDRSKMPKTGAAEASPRSAPSPKSRGSAGTRKEASQATKKAPAKTVNTKVPPTASSAPNKAGSTISKSKGGVASGVSTPQSKSPGTASAKKGGVSQAAKKGPLITSSSSQKGGSETSKAA--GTXXXXXTLRASTPSPKSPGSAGSKKGGASQASKRVPSKTSGSSQKGGSETSKAAGTRTLRISTPSPKSPGSAGSKKGGVSQAGKSALSKAPNAPKDGPKIAKAPGSLGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERSTVAKKKLAGSSTGSTPISKSRGSADATKDVSLGAKSPSANAHTAKKVPAKKSNTSQKGVSSISGAAATVAPLGSTPNSKSLGSAGAKKGEAPRVAKKAPPAAPSVSQKDKSKVSKTNLAKTSSGGTTSPKDSGTAGAKQNSVSQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAGLLGPTPPSKSAGSASAKKGGVSPKVANGLHESGFGDRSREHSGSEREEGEIDLSMEAQRGHMHGAAAWMSSATNPNPALNSRSPPVTGCVVPPPPTGRGMNEERAVYFSMEAMRRHEHAWNSLSPPVTGSVXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAASISFGHHPNPAWNSISPPVTGLVLPPPPRRGINGEDEVYHPMEAMRRQEHAGAASMPSANNPNAAWSSISPPVTGIVPPPPPRDVSMVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARSKNGEGEVDLSMEAMQRQEHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARLKAAAEEINAANIARAKEAMKQPAQSAPSDGMSEQPASASSKNRASLAQPVVLGGAGHMMGAVAGGGSTAMTSMAGTAQSAAPSTSSGTVGATSLAAPPEDGDPVTHDPNYWFFSGGFNAKEST 3771
PDKER DAKTSAAEGKPPEALPLSTSSK HGDGAASGGTA+PSLTAPNXXXXXXXXXXXXXXXXXXXXXXASAEKEADAAHKMPEPESWSEWRALSSDDESDRGA AGGD SDGGPTARNVRGTDQGFEISVRRGSSLERQSGDTDVGRRGA CERSASPRGRSFGRSSRS+DRGSRYDRGDTSRRSTTRERC XXXXXXXXXXXXXXXXXXXXXX RAA DESQTSKRARVDATATTRAAAARTAALSSLKKQESMVLPAAGKVPPSTTGGSKALKGPDSAGAKTDEVSQAADKVSP TPGVPQQDRSKM KTGAAEASPRSAPSPKSRGSAGTR EASQATKKAPAKTVNTKVPPT SSAPNKAGSTISKSKGGVASGVSTPQSKSPGTASAKKGGVS AAKKGPLITSSSSQKGGSETSKAA G XXXXX LR STPSPKSPGSAGSKKGGASQA+KRVPSKTSGSSQKGGSETSKAAGT TLRISTPSPKSPGSAGS +G VSQAGKSALSKAPNAPKDGPKIAKAPGSLGSXXXXXXXXXXXXXXXXXXXXXXXXXX ERSTVAKK LAGSSTGSTPISKSRGSADATKDVSLGAKSP+ANA KSNTSQKGVSSISGAAATVAPL STPNSKS GSAGAKKGEAPRVAKKAPPAAPSVSQKD+SKVSK +LAKTSSG TTSPKD GTAGAKQ SVSQA DAGLLGPTP SKSAGSASAKKGGVSPKV NGLHESGFGDRSREHSGSEREEGEIDLSMEAQRGHMHGAAAWMSSATNPNPALNSRSPPVTGCVVPPPP RGMNEERAV FSMEAMRRHEH XXXXXXXXXXXXXXXXXXXXXXXXXXXAAAASISFGHHPNPAWNSISPPVTGLV PPPPRRGINGE EVYHPMEAM+RQEHAGAASMPSA NPNAAWSSISPPVTGIVPPPPPRDVSM+XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAR KNGEGEVDLSMEAMQRQEHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARLKAAAEEINAANIARAKEAMKQPAQSAPSDGMSEQPASASSKNRASLAQPVVLGGAGH+MGAVAGGGSTAMTSMA TAQSA PSTSSGTVGATSLAAPPEDGDPVTHDPNYWFFSGGFNAKEST
Sbjct: 761 PDKERVDAKTSAAEGKPPEALPLSTSSKDHGDGAASGGTAKPSLTAPNXXXXXXXXXXXXXXXXXXXXXXASAEKEADAAHKMPEPESWSEWRALSSDDESDRGASAGGDVSDGGPTARNVRGTDQGFEISVRRGSSLERQSGDTDVGRRGAHCERSASPRGRSFGRSSRSQDRGSRYDRGDTSRRSTTRERCRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAA---------DESQTSKRARVDATATTRAAAARTAALSSLKKQESMVLPAAGKVPPSTTGGSKALKGPDSAGAKTDEVSQAADKVSPKTPGVPQQDRSKMSKTGAAEASPRSAPSPKSRGSAGTRTEASQATKKAPAKTVNTKVPPTTSSAPNKAGSTISKSKGGVASGVSTPQSKSPGTASAKKGGVSLAAKKGPLITSSSSQKGGSETSKAARTGXXXXXXXLRTSTPSPKSPGSAGSKKGGASQAAKRVPSKTSGSSQKGGSETSKAAGTGTLRISTPSPKSPGSAGSTQGEVSQAGKSALSKAPNAPKDGPKIAKAPGSLGSXXXXXXXXXXXXXXXXXXXXXXXXXXTPKTSQKERSTVAKKYLAGSSTGSTPISKSRGSADATKDVSLGAKSPTANAXXXXXXXXXKSNTSQKGVSSISGAAATVAPLDSTPNSKSPGSAGAKKGEAPRVAKKAPPAAPSVSQKDRSKVSKNDLAKTSSGATTSPKDPGTAGAKQKSVSQAVKKTSSLAKVPKTSSASQIGGATTSKATGDAGLLGPTPSSKSAGSASAKKGGVSPKVVNGLHESGFGDRSREHSGSEREEGEIDLSMEAQRGHMHGAAAWMSSATNPNPALNSRSPPVTGCVVPPPPR-RGMNEERAVNFSMEAMRRHEHGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAASISFGHHPNPAWNSISPPVTGLVPPPPPRRGINGEGEVYHPMEAMQRQEHAGAASMPSAKNPNAAWSSISPPVTGIVPPPPPRDVSMMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARGKNGEGEVDLSMEAMQRQEHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARLKAAAEEINAANIARAKEAMKQPAQSAPSDGMSEQPASASSKNRASLAQPVVLGGAGHLMGAVAGGGSTAMTSMASTAQSAGPSTSSGTVGATSLAAPPEDGDPVTHDPNYWFFSGGFNAKEST 2009
BLAST of mRNA_Ecto-sp6_S_contig89.17919.1 vs. uniprot
Match: A0A6H5KUD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUD4_9PHAE) HSP 1 Score: 1254 bits (3245), Expect = 0.000e+0 Identity = 1039/1515 (68.58%), Postives = 1073/1515 (70.83%), Query Frame = 1
Query: 1 PDKEREDAKTSAAEGKPPEALPLSTSSKVHGDGAASGGTAEPSLTAPNXXXXXXXXXXXXXXXXXXXXXXA--SAEKEADAAHKMPEPESWSEWRALSSDDESDRGARAGGDASDGGPTARNVRGTDQGFEISVRRGSSLERQSGDTDVGRRGAPCERSASPRGRSFGRSSRSRDRGSRYDRGDTSRRSTTRERCXXXXXXXXXXXXXXXXXXXXXXXSRRPTERSRGYGTLARSDERAAEPSRYAALADESQTSKRARVDATATTRAAAARTAALSSLKKQESMVLPAAGKVPPSTTGGSKALKGPDSAGAKTDEVSQAADKVSPNTPGVPQQDRSKMPKTGAAEASPRSAPSPKSRGSAGTRKEASQATKKAPAKTVNTKVPPTASSAPNKAGSTISKSKGGVASGVSTPQSKSPGTASAKKGGVSQAAKKGPLITSSSSQKGGSETSKAAGTXXXXXTLRASTPSPKSPGSAGSKKGGASQASKR-----------------------------------------------------------------------------------------------------------------------------------------------------------VPSKTSGSSQKGGSETSKAAGTRTLRISTPSPKSPGSAGSKKGG--------------------------------------------------------------------------------------------------------VSQAGKSALSKAPNAPKDGPKIAKAPGSLGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERSTVAKKKLAGSSTGSTPISKSRGSADATKDVSLGAKSPSANAHTAKKVPAKKSNTSQKGVSSISGAAATVAPLGSTPNSKSLGSAGAKKGEAPRVAKKAPPAAPSVSQKDKSKVSKTNLAKTSSGGTTSPKDSGTAGAKQNSVSQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAGLLGPTPPSKSAGSASAKKGGVSPKVANGLHESGFGDRSREHSGSEREEGEIDLSMEAQRGHMHGAAAWMSSATNPNPALNSRSPPVTGCVVPPPPTGRGMNEERAVYFSMEAMRRHEHAWNSLSPPVTGSVXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAASISFGHHPNPAWNSISPPVTGLVLPPPPRRGINGEDEVYHPMEAMRRQEHAGAASMPSANNPNAAWSSISPPVTGIVPPPPPRDVSMVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARSKNGEGEVDLSMEAMQRQEHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARLKAAAEEINAANIARAKEAMKQPAQSAPSDGMSEQPASASSKNRASLAQPVVLGGAGHMMGAVAGGGSTAMTSMAGTAQSAAPSTSSGTVGATSLAAPPEDGDPVTHDPNYWFFSGGFNAK 3762
P KER DAKTSAAEGKPPEALP S SSK HGDGAASGGTA+ XXXXXXXXXXXXXXXXXXXXXX SAEKEADAA K PEPE WSEWRALSSDDES+RGA AGGD SDGGPT RNVRGTDQGF+ISVRRGSSLER+SGDTDVGRRGA ERSASPRGRSFGRSSRSRDRGSRYDR XXXXXXXXXXXXXXXXX SRRPTERSRGYG L R DER AEPSRYAALAD+S TSKR+RV ATATTRAAAARTAAL KKQESMVLPAAGK+P STTGGSKALK PDSAGAKTDE SQAADKVSP TP V QQDRSK+ KTGAAE SPRSAPS K RG+A TRKEASQ+TKKAPAKT NT+ PPT SS PNKAG+TISKSKG VASGVSTPQSKSPGTA AKKGGVS AAKKGP TSSS+ KGGSETSKAAGT TLR STPSPKSPGS GSKKGGASQA+K+ VP+KTSGSSQKGGSETS AAGT TLRISTPSPKSPGS G+KKGG VSQAGKSALSK NAPKDGPKIAKAPGSLGS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RSTVAKK LAGSSTGSTPISKSRGSA TKDVSLGAKSP ANA TAKKVP KKS+TS+KGVSSISGAAATVAPLGSTPNSKS GSAGAKKGEAPRVAKK P AAP VSQKD+SKVSK +LAKTSSG TTSPKD GTAGAKQNSVSQA DA LLGPTPPSKSA SASAKK GVSPKVANG ESGFGDRSR+H G E EEGEIDL MEA+RGHMHGAAAWMSSA NPNPALNSRSPPVTG V+PPPP RGMNEERAVY SMEAMRRHEHAW XXXXXXXXXXXXXXXXXXXXXXXXXXXAAAAS+SFGHHPNPAWNSISPPVTGLV PPPPRRGINGE EVYHPME MRRQEH+ A SMPSANNPNAAW+SI PPVT V PPPRDVSM+XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAR KNG+GEVDLSMEAMQRQEH XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARLKAAAEE+NAANIAR KE MKQPAQ PSDGMSEQPASASS+NRASLAQPVV GG GH++GAVAGGGST MT MA TAQSA PSTSSGTVGATSL A PEDGDPVTHDPNYWF SGGF+
Sbjct: 672 PGKERVDAKTSAAEGKPPEALPSSASSKDHGDGAASGGTAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAEKEADAAPKTPEPEGWSEWRALSSDDESNRGASAGGDVSDGGPTTRNVRGTDQGFQISVRRGSSLERRSGDTDVGRRGAHRERSASPRGRSFGRSSRSRDRGSRYDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRERGGSRRPTERSRGYGALPRRDERTAEPSRYAALADDSHTSKRSRVGATATTRAAAARTAALCP-KKQESMVLPAAGKLPSSTTGGSKALKRPDSAGAKTDEGSQAADKVSPKTPSVSQQDRSKISKTGAAEVSPRSAPSSKIRGNADTRKEASQSTKKAPAKTDNTEAPPTTSSTPNKAGTTISKSKGAVASGVSTPQSKSPGTAGAKKGGVSHAAKKGPSKTSSSTHKGGSETSKAAGTGTG--TLRTSTPSPKSPGSVGSKKGGASQAAKKGPSKTAGSSHKGGSETSTAAGTGTLRISTPSPKSPRSVGAKKGGASQAAKKGPSKTAGSSHKGGSETSTAAGTGTLRISTPSPKSPRSVGAKKGGASQAAEKGPSVTSDSSQKGGSETAKAAGTGTGTLRTSTPSPKSPEIVGAKKGGASQAAKKVPAKTSGSSQKGGSETSTAAGTGTLRISTPSPKSPGSVGAKKGGASQAAEKGPSETSDSSQKGGSETAKAAGTGTGTLRTSTPSPKSPEIVGSKKGGASQAAKKVPAKTSDSSQKGGSETSTAAGTGTLRISTPSPKSPRSAGSKQGEVSQAGKSALSKTSNAPKDGPKIAKAPGSLGSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSTVAKKGLAGSSTGSTPISKSRGSAGTTKDVSLGAKSPPANAPTAKKVPPKKSSTSRKGVSSISGAAATVAPLGSTPNSKSPGSAGAKKGEAPRVAKKVPSAAPIVSQKDRSKVSKIDLAKTSSGATTSPKDPGTAGAKQNSVSQAVNKTSLAKVPNTSSASQTGGATTSKAAG-DAALLGPTPPSKSAVSASAKKDGVSPKVANGRRESGFGDRSRKHGGGENEEGEIDLYMEARRGHMHGAAAWMSSAINPNPALNSRSPPVTGVVIPPPPR-RGMNEERAVYVSMEAMRRHEHAWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAASLSFGHHPNPAWNSISPPVTGLVPPPPPRRGINGEGEVYHPMETMRRQEHSSATSMPSANNPNAAWNSIPPPVTRFVTHPPPRDVSMIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARGKNGKGEVDLSMEAMQRQEHTAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARLKAAAEEMNAANIARPKETMKQPAQIGPSDGMSEQPASASSENRASLAQPVVSGGGGHLLGAVAGGGSTEMTGMASTAQSAGPSTSSGTVGATSLLACPEDGDPVTHDPNYWFVSGGFSES 2181 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig89.17919.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp6_S_contig89.17919.1 >prot_Ecto-sp6_S_contig89.17919.1 ID=prot_Ecto-sp6_S_contig89.17919.1|Name=mRNA_Ecto-sp6_S_contig89.17919.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=1258bp PDKEREDAKTSAAEGKPPEALPLSTSSKVHGDGAASGGTAEPSLTAPNGDback to top mRNA from alignment at Ecto-sp6_S_contig89:133194..137912- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp6_S_contig89.17919.1 ID=mRNA_Ecto-sp6_S_contig89.17919.1|Name=mRNA_Ecto-sp6_S_contig89.17919.1|organism=Ectocarpus species6 EcLAC_371|type=mRNA|length=4719bp|location=Sequence derived from alignment at Ecto-sp6_S_contig89:133194..137912- (Ectocarpus species6 EcLAC_371)back to top Coding sequence (CDS) from alignment at Ecto-sp6_S_contig89:133194..137912- >mRNA_Ecto-sp6_S_contig89.17919.1 ID=mRNA_Ecto-sp6_S_contig89.17919.1|Name=mRNA_Ecto-sp6_S_contig89.17919.1|organism=Ectocarpus species6 EcLAC_371|type=CDS|length=3774bp|location=Sequence derived from alignment at Ecto-sp6_S_contig89:133194..137912- (Ectocarpus species6 EcLAC_371)back to top |